data_2L5N # _entry.id 2L5N # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.279 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 2L5N RCSB RCSB101987 WWPDB D_1000101987 # loop_ _pdbx_database_related.content_type _pdbx_database_related.db_id _pdbx_database_related.db_name _pdbx_database_related.details unspecified 2L3U PDB . unspecified 16570 BMRB . unspecified DhR29B TargetDB . # _pdbx_database_status.deposit_site BMRB _pdbx_database_status.entry_id 2L5N _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2010-11-02 _pdbx_database_status.SG_entry Y _pdbx_database_status.status_code REL _pdbx_database_status.status_code_mr REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Cort, J.R.' 1 'Barb, A.W.' 2 'Lee, H.' 3 'Ramelot, T.A.' 4 'Yang, Y.' 5 'Belote, R.L.' 6 'Ciccosanti, C.R.' 7 'Haleema, J.' 8 'Acton, T.B.' 9 'Xiao, R.R.' 10 'Everett, J.K.' 11 'Montelione, G.T.' 12 'Prestegard, J.H.' 13 'Kennedy, M.A.' 14 'Northeast Structural Genomics Consortium (NESG)' 15 # _citation.id primary _citation.title 'Structures of domains I and IV from YbbR are representative of a widely distributed protein family.' _citation.journal_abbrev 'Protein Sci.' _citation.journal_volume 20 _citation.page_first 396 _citation.page_last 405 _citation.year 2011 _citation.journal_id_ASTM PRCIEI _citation.country US _citation.journal_id_ISSN 0961-8368 _citation.journal_id_CSD 0795 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 21154411 _citation.pdbx_database_id_DOI 10.1002/pro.571 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Barb, A.W.' 1 primary 'Cort, J.R.' 2 primary 'Seetharaman, J.' 3 primary 'Lew, S.' 4 primary 'Lee, H.W.' 5 primary 'Acton, T.' 6 primary 'Xiao, R.' 7 primary 'Kennedy, M.A.' 8 primary 'Tong, L.' 9 primary 'Montelione, G.T.' 10 primary 'Prestegard, J.H.' 11 # _entity.id 1 _entity.type polymer _entity.src_method man _entity.pdbx_description 'YbbR family protein' _entity.formula_weight 10791.182 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment 'sequence database residues 32-118' _entity.details ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;SSQTLDRDPTLTLSLIAKNTPANSMIMTKLPSVRVKTEGYNPSINVNELFAYVDLSGSEPGEHDYEVKVEPIPNIKIVEI SPRVVTLQLEHHHHHH ; _entity_poly.pdbx_seq_one_letter_code_can ;SSQTLDRDPTLTLSLIAKNTPANSMIMTKLPSVRVKTEGYNPSINVNELFAYVDLSGSEPGEHDYEVKVEPIPNIKIVEI SPRVVTLQLEHHHHHH ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier DhR29B # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 SER n 1 2 SER n 1 3 GLN n 1 4 THR n 1 5 LEU n 1 6 ASP n 1 7 ARG n 1 8 ASP n 1 9 PRO n 1 10 THR n 1 11 LEU n 1 12 THR n 1 13 LEU n 1 14 SER n 1 15 LEU n 1 16 ILE n 1 17 ALA n 1 18 LYS n 1 19 ASN n 1 20 THR n 1 21 PRO n 1 22 ALA n 1 23 ASN n 1 24 SER n 1 25 MET n 1 26 ILE n 1 27 MET n 1 28 THR n 1 29 LYS n 1 30 LEU n 1 31 PRO n 1 32 SER n 1 33 VAL n 1 34 ARG n 1 35 VAL n 1 36 LYS n 1 37 THR n 1 38 GLU n 1 39 GLY n 1 40 TYR n 1 41 ASN n 1 42 PRO n 1 43 SER n 1 44 ILE n 1 45 ASN n 1 46 VAL n 1 47 ASN n 1 48 GLU n 1 49 LEU n 1 50 PHE n 1 51 ALA n 1 52 TYR n 1 53 VAL n 1 54 ASP n 1 55 LEU n 1 56 SER n 1 57 GLY n 1 58 SER n 1 59 GLU n 1 60 PRO n 1 61 GLY n 1 62 GLU n 1 63 HIS n 1 64 ASP n 1 65 TYR n 1 66 GLU n 1 67 VAL n 1 68 LYS n 1 69 VAL n 1 70 GLU n 1 71 PRO n 1 72 ILE n 1 73 PRO n 1 74 ASN n 1 75 ILE n 1 76 LYS n 1 77 ILE n 1 78 VAL n 1 79 GLU n 1 80 ILE n 1 81 SER n 1 82 PRO n 1 83 ARG n 1 84 VAL n 1 85 VAL n 1 86 THR n 1 87 LEU n 1 88 GLN n 1 89 LEU n 1 90 GLU n 1 91 HIS n 1 92 HIS n 1 93 HIS n 1 94 HIS n 1 95 HIS n 1 96 HIS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene Dhaf_0833 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain DCB-2 _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Desulfitobacterium hafniense' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 272564 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector pET21-23C _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code B8FX10_DESHD _struct_ref.pdbx_db_accession B8FX10 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;SQTLDRDPTLTLSLIAKNTPANSMIMTKLPSVRVKTEGYNPSINVNELFAYVDLSGSEPGEHDYEVKVEPIPNIKIVEIS PRVVTLQL ; _struct_ref.pdbx_align_begin 32 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 2L5N _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 2 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 89 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession B8FX10 _struct_ref_seq.db_align_beg 32 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 119 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 2 _struct_ref_seq.pdbx_auth_seq_align_end 89 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 2L5N SER A 1 ? UNP B8FX10 ? ? 'EXPRESSION TAG' 1 1 1 2L5N GLU A 90 ? UNP B8FX10 ? ? 'EXPRESSION TAG' 90 2 1 2L5N HIS A 91 ? UNP B8FX10 ? ? 'EXPRESSION TAG' 91 3 1 2L5N HIS A 92 ? UNP B8FX10 ? ? 'EXPRESSION TAG' 92 4 1 2L5N HIS A 93 ? UNP B8FX10 ? ? 'EXPRESSION TAG' 93 5 1 2L5N HIS A 94 ? UNP B8FX10 ? ? 'EXPRESSION TAG' 94 6 1 2L5N HIS A 95 ? UNP B8FX10 ? ? 'EXPRESSION TAG' 95 7 1 2L5N HIS A 96 ? UNP B8FX10 ? ? 'EXPRESSION TAG' 96 8 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.solution_id _pdbx_nmr_exptl.type 1 1 1 '2D 1H-15N HSQC' 1 2 3 '2D 1H-13C HSQC' 1 3 1 '3D CBCA(CO)NH' 1 4 1 '3D C(CO)NH' 1 5 1 '3D HNCO' 1 6 1 '3D HNCACB' 1 7 1 '3D HBHA(CO)NH' 1 8 1 '3D HCCH-TOCSY' 1 9 1 '3D 1H-15N NOESY' 1 10 1 '3D 1H-13C NOESY' 1 11 2 '4D 1H-13C-13C-1H HMQC-NOESY-HMQC' # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.ionic_strength 0.23 _pdbx_nmr_exptl_sample_conditions.pH 4.5 _pdbx_nmr_exptl_sample_conditions.pressure ambient _pdbx_nmr_exptl_sample_conditions.pressure_units ? _pdbx_nmr_exptl_sample_conditions.temperature 293 _pdbx_nmr_exptl_sample_conditions.temperature_units K # loop_ _pdbx_nmr_sample_details.contents _pdbx_nmr_sample_details.solution_id _pdbx_nmr_sample_details.solvent_system ;0.8 mM [U-100% 13C; U-100% 15N] Dhaf_0833 (32-118), 20 mM ammonium acetate, 200 mM sodium chloride, 10 mM calcium chloride, 0.02 % sodium azide, 95% H2O/5% D2O ; 1 '95% H2O/5% D2O' ;0.8 mM [U-100% 13C; U-100% 15N] Dhaf_0833 (32-118), 20 mM ammonium acetate, 200 mM sodium chloride, 10 mM calcium chloride, 0.02 % sodium azide, 100% D2O ; 2 '100% D2O' ;0.8 mM [5% 13C from 5% U-13C glucose in growth medium; U-100% 15N] Dhaf_0833 (32-118), 20 mM ammonium acetate, 200 mM sodium chloride, 10 mM calcium chloride, 0.02 % sodium azide, 95% H2O/5% D2O ; 3 '95% H2O/5% D2O' # loop_ _pdbx_nmr_spectrometer.field_strength _pdbx_nmr_spectrometer.manufacturer _pdbx_nmr_spectrometer.model _pdbx_nmr_spectrometer.spectrometer_id _pdbx_nmr_spectrometer.type 600 Varian INOVA 1 'Varian INOVA' 750 Varian INOVA 2 'Varian INOVA' 850 Bruker Avance 3 'Bruker Avance' # _pdbx_nmr_refine.entry_id 2L5N _pdbx_nmr_refine.method 'simulated annealing' _pdbx_nmr_refine.details ? _pdbx_nmr_refine.software_ordinal 1 # _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.conformer_selection_criteria 'low energy, few restraint violations, favorable geometry' _pdbx_nmr_ensemble.conformers_calculated_total_number 40 _pdbx_nmr_ensemble.conformers_submitted_total_number 10 _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.entry_id 2L5N _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.entry_id 2L5N _pdbx_nmr_representative.selection_criteria 'no criteria' # loop_ _pdbx_nmr_software.authors _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.ordinal 'Huang, Tejero, Powers and Montelione' 'structure solution' AutoStructure ? 1 'Brunger, Adams, Clore, Gros, Nilges and Read' refinement CNS ? 2 'Schwieters, Kuszewski, Tjandra and Clore' 'structure solution' X-PLOR_NIH ? 3 'Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax' processing NMRPipe ? 4 'Bhattacharya and Montelione' refinement PSVS ? 5 'Accelrys Software Inc.' processing Felix ? 6 Goddard 'data analysis' SPARKY ? 7 Goddard 'peak picking' SPARKY ? 8 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.crystals_number ? _exptl.details 'Structures of Domains I and IV from YbbR are representative of a widely distributed protein family' _exptl.entry_id 2L5N _exptl.method 'SOLUTION NMR' _exptl.method_details ? # _struct.entry_id 2L5N _struct.title ;NMR Structure of YbbR family protein Dhaf_0833 (residues 32-118) from Desulfitobacterium hafniense DCB-2: Northeast Structural Genomics Consortium target DhR29B ; _struct.pdbx_descriptor 'YbbR family protein' _struct.pdbx_model_details 'no criteria, model 1' _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2L5N _struct_keywords.pdbx_keywords 'Structural genomics, Unknown function' _struct_keywords.text 'Structural Genomics, PSI-Biology, Protein Structure Initiative, Northeast Structural Genomics Consortium, NESG, Unknown function' # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 SER 81 A . ? SER 81 A PRO 82 A ? PRO 82 A 1 -0.55 2 SER 81 A . ? SER 81 A PRO 82 A ? PRO 82 A 2 -0.32 3 SER 81 A . ? SER 81 A PRO 82 A ? PRO 82 A 3 -1.54 4 SER 81 A . ? SER 81 A PRO 82 A ? PRO 82 A 4 0.95 5 SER 81 A . ? SER 81 A PRO 82 A ? PRO 82 A 5 0.74 6 SER 81 A . ? SER 81 A PRO 82 A ? PRO 82 A 6 -1.26 7 SER 81 A . ? SER 81 A PRO 82 A ? PRO 82 A 7 -0.52 8 SER 81 A . ? SER 81 A PRO 82 A ? PRO 82 A 8 -1.01 9 SER 81 A . ? SER 81 A PRO 82 A ? PRO 82 A 9 0.76 10 SER 81 A . ? SER 81 A PRO 82 A ? PRO 82 A 10 1.55 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 3 ? B ? 2 ? C ? 3 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel B 1 2 ? parallel C 1 2 ? anti-parallel C 2 3 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 THR A 10 ? LEU A 13 ? THR A 10 LEU A 13 A 2 VAL A 33 ? THR A 37 ? VAL A 33 THR A 37 A 3 ILE A 77 ? SER A 81 ? ILE A 77 SER A 81 B 1 LEU A 15 ? ALA A 17 ? LEU A 15 ALA A 17 B 2 ALA A 51 ? VAL A 53 ? ALA A 51 VAL A 53 C 1 SER A 24 ? ILE A 26 ? SER A 24 ILE A 26 C 2 VAL A 84 ? HIS A 91 ? VAL A 84 HIS A 91 C 3 GLU A 62 ? GLU A 66 ? GLU A 62 GLU A 66 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N LEU A 13 ? N LEU A 13 O VAL A 33 ? O VAL A 33 A 2 3 N LYS A 36 ? N LYS A 36 O VAL A 78 ? O VAL A 78 B 1 2 N ILE A 16 ? N ILE A 16 O ALA A 51 ? O ALA A 51 C 1 2 N MET A 25 ? N MET A 25 O GLU A 90 ? O GLU A 90 C 2 3 O VAL A 85 ? O VAL A 85 N TYR A 65 ? N TYR A 65 # _atom_sites.entry_id 2L5N _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 SER 1 1 1 SER SER A . n A 1 2 SER 2 2 2 SER SER A . n A 1 3 GLN 3 3 3 GLN GLN A . n A 1 4 THR 4 4 4 THR THR A . n A 1 5 LEU 5 5 5 LEU LEU A . n A 1 6 ASP 6 6 6 ASP ASP A . n A 1 7 ARG 7 7 7 ARG ARG A . n A 1 8 ASP 8 8 8 ASP ASP A . n A 1 9 PRO 9 9 9 PRO PRO A . n A 1 10 THR 10 10 10 THR THR A . n A 1 11 LEU 11 11 11 LEU LEU A . n A 1 12 THR 12 12 12 THR THR A . n A 1 13 LEU 13 13 13 LEU LEU A . n A 1 14 SER 14 14 14 SER SER A . n A 1 15 LEU 15 15 15 LEU LEU A . n A 1 16 ILE 16 16 16 ILE ILE A . n A 1 17 ALA 17 17 17 ALA ALA A . n A 1 18 LYS 18 18 18 LYS LYS A . n A 1 19 ASN 19 19 19 ASN ASN A . n A 1 20 THR 20 20 20 THR THR A . n A 1 21 PRO 21 21 21 PRO PRO A . n A 1 22 ALA 22 22 22 ALA ALA A . n A 1 23 ASN 23 23 23 ASN ASN A . n A 1 24 SER 24 24 24 SER SER A . n A 1 25 MET 25 25 25 MET MET A . n A 1 26 ILE 26 26 26 ILE ILE A . n A 1 27 MET 27 27 27 MET MET A . n A 1 28 THR 28 28 28 THR THR A . n A 1 29 LYS 29 29 29 LYS LYS A . n A 1 30 LEU 30 30 30 LEU LEU A . n A 1 31 PRO 31 31 31 PRO PRO A . n A 1 32 SER 32 32 32 SER SER A . n A 1 33 VAL 33 33 33 VAL VAL A . n A 1 34 ARG 34 34 34 ARG ARG A . n A 1 35 VAL 35 35 35 VAL VAL A . n A 1 36 LYS 36 36 36 LYS LYS A . n A 1 37 THR 37 37 37 THR THR A . n A 1 38 GLU 38 38 38 GLU GLU A . n A 1 39 GLY 39 39 39 GLY GLY A . n A 1 40 TYR 40 40 40 TYR TYR A . n A 1 41 ASN 41 41 41 ASN ASN A . n A 1 42 PRO 42 42 42 PRO PRO A . n A 1 43 SER 43 43 43 SER SER A . n A 1 44 ILE 44 44 44 ILE ILE A . n A 1 45 ASN 45 45 45 ASN ASN A . n A 1 46 VAL 46 46 46 VAL VAL A . n A 1 47 ASN 47 47 47 ASN ASN A . n A 1 48 GLU 48 48 48 GLU GLU A . n A 1 49 LEU 49 49 49 LEU LEU A . n A 1 50 PHE 50 50 50 PHE PHE A . n A 1 51 ALA 51 51 51 ALA ALA A . n A 1 52 TYR 52 52 52 TYR TYR A . n A 1 53 VAL 53 53 53 VAL VAL A . n A 1 54 ASP 54 54 54 ASP ASP A . n A 1 55 LEU 55 55 55 LEU LEU A . n A 1 56 SER 56 56 56 SER SER A . n A 1 57 GLY 57 57 57 GLY GLY A . n A 1 58 SER 58 58 58 SER SER A . n A 1 59 GLU 59 59 59 GLU GLU A . n A 1 60 PRO 60 60 60 PRO PRO A . n A 1 61 GLY 61 61 61 GLY GLY A . n A 1 62 GLU 62 62 62 GLU GLU A . n A 1 63 HIS 63 63 63 HIS HIS A . n A 1 64 ASP 64 64 64 ASP ASP A . n A 1 65 TYR 65 65 65 TYR TYR A . n A 1 66 GLU 66 66 66 GLU GLU A . n A 1 67 VAL 67 67 67 VAL VAL A . n A 1 68 LYS 68 68 68 LYS LYS A . n A 1 69 VAL 69 69 69 VAL VAL A . n A 1 70 GLU 70 70 70 GLU GLU A . n A 1 71 PRO 71 71 71 PRO PRO A . n A 1 72 ILE 72 72 72 ILE ILE A . n A 1 73 PRO 73 73 73 PRO PRO A . n A 1 74 ASN 74 74 74 ASN ASN A . n A 1 75 ILE 75 75 75 ILE ILE A . n A 1 76 LYS 76 76 76 LYS LYS A . n A 1 77 ILE 77 77 77 ILE ILE A . n A 1 78 VAL 78 78 78 VAL VAL A . n A 1 79 GLU 79 79 79 GLU GLU A . n A 1 80 ILE 80 80 80 ILE ILE A . n A 1 81 SER 81 81 81 SER SER A . n A 1 82 PRO 82 82 82 PRO PRO A . n A 1 83 ARG 83 83 83 ARG ARG A . n A 1 84 VAL 84 84 84 VAL VAL A . n A 1 85 VAL 85 85 85 VAL VAL A . n A 1 86 THR 86 86 86 THR THR A . n A 1 87 LEU 87 87 87 LEU LEU A . n A 1 88 GLN 88 88 88 GLN GLN A . n A 1 89 LEU 89 89 89 LEU LEU A . n A 1 90 GLU 90 90 90 GLU GLU A . n A 1 91 HIS 91 91 91 HIS HIS A . n A 1 92 HIS 92 92 92 HIS HIS A . n A 1 93 HIS 93 93 93 HIS HIS A . n A 1 94 HIS 94 94 94 HIS HIS A . n A 1 95 HIS 95 95 95 HIS HIS A . n A 1 96 HIS 96 96 96 HIS HIS A . n # _pdbx_SG_project.full_name_of_center 'Northeast Structural Genomics Consortium' _pdbx_SG_project.id 1 _pdbx_SG_project.initial_of_center NESG _pdbx_SG_project.project_name PSI:Biology # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2010-12-29 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2012-02-22 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Structure summary' # loop_ _pdbx_nmr_exptl_sample.component _pdbx_nmr_exptl_sample.concentration _pdbx_nmr_exptl_sample.concentration_range _pdbx_nmr_exptl_sample.concentration_units _pdbx_nmr_exptl_sample.isotopic_labeling _pdbx_nmr_exptl_sample.solution_id 'Dhaf_0833 (32-118)-1' 0.8 ? mM '[U-100% 13C; U-100% 15N]' 1 'ammonium acetate-2' 20 ? mM ? 1 'sodium chloride-3' 200 ? mM ? 1 'calcium chloride-4' 10 ? mM ? 1 'sodium azide-5' 0.02 ? % ? 1 'Dhaf_0833 (32-118)-6' 0.8 ? mM '[U-100% 13C; U-100% 15N]' 2 'ammonium acetate-7' 20 ? mM ? 2 'sodium chloride-8' 200 ? mM ? 2 'calcium chloride-9' 10 ? mM ? 2 'sodium azide-10' 0.02 ? % ? 2 'Dhaf_0833 (32-118)-11' 0.8 ? mM '[5% 13C from 5% U-13C glucose in growth medium; U-100% 15N]' 3 'ammonium acetate-12' 20 ? mM ? 3 'sodium chloride-13' 200 ? mM ? 3 'calcium chloride-14' 10 ? mM ? 3 'sodium azide-15' 0.02 ? % ? 3 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 GLN A 3 ? ? -75.80 -87.14 2 1 THR A 4 ? ? -81.08 -151.12 3 1 LEU A 5 ? ? 73.07 78.52 4 1 ARG A 7 ? ? -39.18 147.15 5 1 MET A 27 ? ? -118.74 63.78 6 1 THR A 28 ? ? -178.02 146.59 7 1 SER A 32 ? ? -59.19 -179.02 8 1 GLU A 38 ? ? -77.99 47.53 9 1 SER A 43 ? ? -145.31 -101.71 10 1 ASN A 45 ? ? 39.45 70.90 11 1 SER A 56 ? ? -60.01 14.24 12 1 GLU A 59 ? ? 179.91 123.10 13 1 PRO A 60 ? ? -45.57 71.42 14 1 ASN A 74 ? ? -175.09 -44.29 15 1 GLU A 79 ? ? -179.69 -175.99 16 1 SER A 81 ? ? -167.04 106.09 17 1 PRO A 82 ? ? -62.39 -173.78 18 1 HIS A 93 ? ? 55.07 93.87 19 1 HIS A 94 ? ? -63.40 75.41 20 1 HIS A 95 ? ? 52.62 -174.67 21 2 SER A 14 ? ? -58.67 179.58 22 2 ASN A 19 ? ? 43.53 100.84 23 2 PRO A 21 ? ? -36.84 95.98 24 2 ALA A 22 ? ? -39.33 161.79 25 2 LEU A 30 ? ? 59.38 95.24 26 2 SER A 32 ? ? -57.89 175.59 27 2 ASN A 41 ? ? -174.42 75.08 28 2 PRO A 42 ? ? -71.40 38.88 29 2 SER A 43 ? ? -170.11 97.14 30 2 ASN A 45 ? ? 39.43 56.98 31 2 VAL A 46 ? ? -70.14 35.33 32 2 GLU A 48 ? ? -124.38 -54.85 33 2 LEU A 49 ? ? -25.42 113.70 34 2 SER A 56 ? ? -62.40 8.71 35 2 SER A 58 ? ? -162.41 76.71 36 2 PRO A 60 ? ? -48.09 108.76 37 2 TYR A 65 ? ? -94.38 -122.77 38 2 ASN A 74 ? ? 78.88 -11.90 39 2 GLU A 79 ? ? -167.80 -146.20 40 2 SER A 81 ? ? -163.17 101.05 41 2 PRO A 82 ? ? -63.97 -166.31 42 3 SER A 2 ? ? -61.03 -74.42 43 3 ARG A 7 ? ? 42.69 -125.10 44 3 ASP A 8 ? ? 40.03 84.36 45 3 GLU A 38 ? ? -80.75 47.04 46 3 SER A 43 ? ? -171.27 42.23 47 3 VAL A 46 ? ? -72.25 33.58 48 3 SER A 56 ? ? 29.61 -90.26 49 3 PRO A 60 ? ? -39.79 144.06 50 3 GLU A 79 ? ? 177.67 147.61 51 3 SER A 81 ? ? -178.26 119.13 52 3 HIS A 95 ? ? -170.84 33.34 53 4 SER A 2 ? ? -165.61 -57.14 54 4 GLN A 3 ? ? 54.31 75.74 55 4 THR A 4 ? ? 56.41 105.09 56 4 LEU A 5 ? ? -145.53 -60.45 57 4 ASP A 6 ? ? 57.41 175.31 58 4 ASP A 8 ? ? 41.57 97.23 59 4 ASN A 19 ? ? 48.80 26.83 60 4 GLU A 38 ? ? -53.78 -72.52 61 4 SER A 43 ? ? -146.55 -97.69 62 4 ILE A 44 ? ? 59.12 128.91 63 4 ASN A 45 ? ? -56.34 90.64 64 4 LEU A 55 ? ? -71.86 45.94 65 4 SER A 56 ? ? -57.55 -142.95 66 4 SER A 58 ? ? 154.55 -5.21 67 4 GLU A 59 ? ? -37.91 95.86 68 4 ASN A 74 ? ? 79.48 -15.12 69 4 ILE A 80 ? ? -110.23 -77.61 70 4 SER A 81 ? ? 54.97 108.35 71 4 HIS A 92 ? ? -69.18 98.32 72 5 SER A 2 ? ? 55.37 -174.49 73 5 THR A 4 ? ? -155.91 74.64 74 5 ASP A 6 ? ? 71.27 -34.15 75 5 ARG A 7 ? ? 46.22 103.36 76 5 ASP A 8 ? ? 53.03 83.16 77 5 ASN A 19 ? ? 171.71 -79.59 78 5 THR A 20 ? ? 48.66 70.38 79 5 ALA A 22 ? ? -48.36 -175.60 80 5 ASN A 23 ? ? 73.55 -25.68 81 5 LEU A 30 ? ? -53.08 103.11 82 5 ASN A 45 ? ? -68.16 55.51 83 5 VAL A 46 ? ? -70.56 24.75 84 5 SER A 56 ? ? 29.13 -108.93 85 5 SER A 58 ? ? 149.31 134.27 86 5 GLU A 62 ? ? 54.79 137.30 87 5 ASN A 74 ? ? 166.25 -19.99 88 5 GLU A 79 ? ? -179.54 -175.53 89 5 ILE A 80 ? ? -107.56 -75.35 90 5 SER A 81 ? ? 53.57 101.43 91 5 HIS A 92 ? ? -61.99 72.15 92 6 THR A 4 ? ? 49.81 80.82 93 6 ASP A 6 ? ? -138.03 -112.85 94 6 ARG A 7 ? ? 39.73 66.20 95 6 ASP A 8 ? ? -165.30 107.59 96 6 PRO A 21 ? ? -59.05 -146.43 97 6 ASN A 23 ? ? -13.91 84.84 98 6 ASN A 41 ? ? 59.69 77.90 99 6 SER A 43 ? ? -169.86 21.77 100 6 ASN A 45 ? ? -55.56 91.58 101 6 GLU A 48 ? ? -43.99 -14.81 102 6 LEU A 55 ? ? -56.29 -6.07 103 6 SER A 56 ? ? 34.82 -95.49 104 6 SER A 58 ? ? 8.51 144.07 105 6 PRO A 71 ? ? -39.51 153.90 106 6 PRO A 73 ? ? -37.46 -106.11 107 6 GLU A 79 ? ? -173.17 133.62 108 6 HIS A 92 ? ? -72.18 43.62 109 6 HIS A 95 ? ? -170.30 132.07 110 7 SER A 2 ? ? 54.48 173.76 111 7 LEU A 5 ? ? 53.29 -177.99 112 7 ASP A 8 ? ? 41.64 75.99 113 7 ASN A 19 ? ? -166.45 -34.89 114 7 THR A 20 ? ? 59.34 76.56 115 7 ALA A 22 ? ? -51.37 -169.96 116 7 ASN A 23 ? ? 71.23 -38.68 117 7 GLU A 38 ? ? -58.04 -75.29 118 7 SER A 43 ? ? -165.51 -96.16 119 7 ILE A 44 ? ? 57.76 141.47 120 7 SER A 56 ? ? 28.18 -89.86 121 7 SER A 58 ? ? 75.56 95.82 122 7 GLU A 62 ? ? -170.65 144.02 123 7 ASN A 74 ? ? 65.63 -1.27 124 7 GLU A 79 ? ? -175.62 141.68 125 7 HIS A 92 ? ? -73.16 -122.76 126 7 HIS A 95 ? ? -156.90 4.44 127 8 ASP A 6 ? ? 177.12 -41.20 128 8 ASP A 8 ? ? -152.28 86.27 129 8 ALA A 22 ? ? -42.83 158.15 130 8 GLU A 38 ? ? -57.36 -74.72 131 8 SER A 43 ? ? -161.17 -88.91 132 8 ILE A 44 ? ? 31.56 100.64 133 8 ASN A 45 ? ? -63.65 96.85 134 8 VAL A 46 ? ? -66.63 20.88 135 8 SER A 58 ? ? -153.45 -63.92 136 8 GLU A 59 ? ? 66.36 151.92 137 8 PRO A 60 ? ? -35.06 143.29 138 8 GLU A 62 ? ? 57.17 141.07 139 8 ASN A 74 ? ? 80.67 -26.27 140 8 HIS A 94 ? ? 52.76 173.42 141 8 HIS A 95 ? ? 55.68 97.15 142 9 GLN A 3 ? ? -173.45 17.13 143 9 ARG A 7 ? ? -48.98 -8.82 144 9 LEU A 15 ? ? -68.52 95.94 145 9 THR A 20 ? ? 45.66 80.91 146 9 LEU A 30 ? ? 61.95 91.81 147 9 GLU A 38 ? ? -109.84 41.62 148 9 TYR A 40 ? ? 59.73 153.29 149 9 ASN A 41 ? ? -175.40 148.11 150 9 SER A 43 ? ? -159.42 -56.80 151 9 ILE A 44 ? ? 91.92 -113.88 152 9 ASN A 45 ? ? -175.87 -19.47 153 9 VAL A 46 ? ? 28.18 43.58 154 9 SER A 56 ? ? 20.18 -97.93 155 9 SER A 58 ? ? 101.94 45.24 156 9 PRO A 60 ? ? -44.11 -179.03 157 9 GLU A 79 ? ? -170.42 -127.19 158 9 ILE A 80 ? ? -154.23 -77.53 159 9 SER A 81 ? ? 58.71 101.94 160 9 HIS A 92 ? ? -65.12 69.52 161 9 HIS A 94 ? ? -61.97 85.21 162 10 GLN A 3 ? ? 53.72 88.21 163 10 ASP A 6 ? ? 178.80 -118.69 164 10 ARG A 7 ? ? 60.43 -122.56 165 10 LYS A 18 ? ? -114.03 50.40 166 10 ASN A 19 ? ? 172.81 34.35 167 10 GLU A 38 ? ? -124.37 -138.17 168 10 TYR A 40 ? ? -144.32 -25.96 169 10 ASN A 41 ? ? 61.97 67.43 170 10 SER A 43 ? ? -172.07 55.27 171 10 VAL A 46 ? ? -46.72 -9.54 172 10 GLU A 48 ? ? -102.98 55.79 173 10 SER A 56 ? ? 15.02 -113.75 174 10 SER A 58 ? ? -151.08 32.25 175 10 GLU A 59 ? ? -41.96 101.70 176 10 ASN A 74 ? ? 167.78 -52.19 177 10 GLU A 79 ? ? -148.05 -152.41 178 10 ILE A 80 ? ? -144.10 -48.24 179 10 SER A 81 ? ? 31.04 96.38 180 10 PRO A 82 ? ? -68.29 -172.15 181 10 HIS A 93 ? ? -62.07 99.46 #