data_2LA4 # _entry.id 2LA4 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.371 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2LA4 pdb_00002la4 10.2210/pdb2la4/pdb RCSB RCSB102147 ? ? BMRB 17502 ? ? WWPDB D_1000102147 ? ? # _pdbx_database_related.db_id 17502 _pdbx_database_related.db_name BMRB _pdbx_database_related.content_type unspecified _pdbx_database_related.details . # _pdbx_database_status.deposit_site BMRB _pdbx_database_status.entry_id 2LA4 _pdbx_database_status.process_site PDBJ _pdbx_database_status.recvd_initial_deposition_date 2011-03-01 _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code REL _pdbx_database_status.status_code_mr REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_cs REL _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data REL # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Santiveri, C.M.' 1 'Mirassou, Y.' 2 'Rico-Lastres, P.' 3 'Martinez-Lumbreras, S.' 4 'Perez-Canadillas, J.M.' 5 # _citation.id primary _citation.title 'Pub1p C-terminal RRM domain interacts with Tif4631p through a conserved region neighbouring the Pab1p binding site' _citation.journal_abbrev 'Plos One' _citation.journal_volume 6 _citation.page_first e24481 _citation.page_last e24481 _citation.year 2011 _citation.journal_id_ASTM ? _citation.country US _citation.journal_id_ISSN 1932-6203 _citation.journal_id_CSD ? _citation.book_publisher ? _citation.pdbx_database_id_PubMed 21931728 _citation.pdbx_database_id_DOI 10.1371/journal.pone.0024481 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Santiveri, C.M.' 1 ? primary 'Mirassou, Y.' 2 ? primary 'Rico-Lastres, P.' 3 ? primary 'Martinez-Lumbreras, S.' 4 ? primary 'Perez-Canadillas, J.M.' 5 ? # _entity.id 1 _entity.type polymer _entity.src_method man _entity.pdbx_description 'Nuclear and cytoplasmic polyadenylated RNA-binding protein PUB1' _entity.formula_weight 11295.882 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment 'C-terminal RRM domain, residues 315-414' _entity.details ? # _entity_name_com.entity_id 1 _entity_name_com.name 'ARS consensus-binding protein ACBP-60, Poly uridylate-binding protein, Poly(U)-binding protein' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GSQTIGLPPQVNPQAVDHIIRSAPPRVTTAYIGNIPHFATEADLIPLFQNFGFILDFKHYPEKGCCFIKYDTHEQAAVCI VALANFPFQGRNLRTGWGKER ; _entity_poly.pdbx_seq_one_letter_code_can ;GSQTIGLPPQVNPQAVDHIIRSAPPRVTTAYIGNIPHFATEADLIPLFQNFGFILDFKHYPEKGCCFIKYDTHEQAAVCI VALANFPFQGRNLRTGWGKER ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 SER n 1 3 GLN n 1 4 THR n 1 5 ILE n 1 6 GLY n 1 7 LEU n 1 8 PRO n 1 9 PRO n 1 10 GLN n 1 11 VAL n 1 12 ASN n 1 13 PRO n 1 14 GLN n 1 15 ALA n 1 16 VAL n 1 17 ASP n 1 18 HIS n 1 19 ILE n 1 20 ILE n 1 21 ARG n 1 22 SER n 1 23 ALA n 1 24 PRO n 1 25 PRO n 1 26 ARG n 1 27 VAL n 1 28 THR n 1 29 THR n 1 30 ALA n 1 31 TYR n 1 32 ILE n 1 33 GLY n 1 34 ASN n 1 35 ILE n 1 36 PRO n 1 37 HIS n 1 38 PHE n 1 39 ALA n 1 40 THR n 1 41 GLU n 1 42 ALA n 1 43 ASP n 1 44 LEU n 1 45 ILE n 1 46 PRO n 1 47 LEU n 1 48 PHE n 1 49 GLN n 1 50 ASN n 1 51 PHE n 1 52 GLY n 1 53 PHE n 1 54 ILE n 1 55 LEU n 1 56 ASP n 1 57 PHE n 1 58 LYS n 1 59 HIS n 1 60 TYR n 1 61 PRO n 1 62 GLU n 1 63 LYS n 1 64 GLY n 1 65 CYS n 1 66 CYS n 1 67 PHE n 1 68 ILE n 1 69 LYS n 1 70 TYR n 1 71 ASP n 1 72 THR n 1 73 HIS n 1 74 GLU n 1 75 GLN n 1 76 ALA n 1 77 ALA n 1 78 VAL n 1 79 CYS n 1 80 ILE n 1 81 VAL n 1 82 ALA n 1 83 LEU n 1 84 ALA n 1 85 ASN n 1 86 PHE n 1 87 PRO n 1 88 PHE n 1 89 GLN n 1 90 GLY n 1 91 ARG n 1 92 ASN n 1 93 LEU n 1 94 ARG n 1 95 THR n 1 96 GLY n 1 97 TRP n 1 98 GLY n 1 99 LYS n 1 100 GLU n 1 101 ARG n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name yeast _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene PUB1 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Saccharomyces cerevisiae' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 4932 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type vector _entity_src_gen.pdbx_host_org_vector 'modified pet28' _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code PUB1_YEAST _struct_ref.pdbx_db_accession P32588 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;SQTIGLPPQVNPQAVDHIIRSAPPRVTTAYIGNIPHFATEADLIPLFQNFGFILDFKHYPEKGCCFIKYDTHEQAAVCIV ALANFPFQGRNLRTGWGKER ; _struct_ref.pdbx_align_begin 315 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 2LA4 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 2 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 101 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P32588 _struct_ref_seq.db_align_beg 315 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 414 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 315 _struct_ref_seq.pdbx_auth_seq_align_end 414 # _struct_ref_seq_dif.align_id 1 _struct_ref_seq_dif.pdbx_pdb_id_code 2LA4 _struct_ref_seq_dif.mon_id GLY _struct_ref_seq_dif.pdbx_pdb_strand_id A _struct_ref_seq_dif.seq_num 1 _struct_ref_seq_dif.pdbx_pdb_ins_code ? _struct_ref_seq_dif.pdbx_seq_db_name UNP _struct_ref_seq_dif.pdbx_seq_db_accession_code P32588 _struct_ref_seq_dif.db_mon_id ? _struct_ref_seq_dif.pdbx_seq_db_seq_num ? _struct_ref_seq_dif.details 'expression tag' _struct_ref_seq_dif.pdbx_auth_seq_num 314 _struct_ref_seq_dif.pdbx_ordinal 1 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.solution_id _pdbx_nmr_exptl.type 1 1 2 '2D 1H-1H NOESY' 1 2 1 '3D 1H-15N NOESY 2D 1H-15N HSQC' 1 3 4 '3D HNCO' 1 4 4 '3D HN(CA)CO' 1 5 4 '3D HNCA' 1 6 4 '3D HN(CO)CA' 1 7 4 '3D CBCA(CO)NH' 1 8 4 '3D CBCANH' 1 9 4 '3D HC -TOCSY' 1 10 3 '2D 1H-1H NOESY' 1 11 2 '2D 1H-1H TOCSY' 1 12 3 '2D 1H-1H TOCSY' 1 13 1 '2D 1H-15N HSQC' 1 14 4 '2D 1H-13C HSQC' # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.ionic_strength ? _pdbx_nmr_exptl_sample_conditions.pH 7.0 _pdbx_nmr_exptl_sample_conditions.pressure 1 _pdbx_nmr_exptl_sample_conditions.pressure_units atm _pdbx_nmr_exptl_sample_conditions.temperature 298 _pdbx_nmr_exptl_sample_conditions.temperature_units K # loop_ _pdbx_nmr_sample_details.contents _pdbx_nmr_sample_details.solution_id _pdbx_nmr_sample_details.solvent_system '0.3mM [U-99% 15N] PUB1 RRM3-1, 25mM potassium phosphate-2, 25mM sodium chloride-3, 0.5mM DTT-4, 0.01mM DSS-5, 90% H2O/10% D2O' 1 '90% H2O/10% D2O' '0.3mM PUB1 RRM3-6, 25mM potassium phosphate-7, 25mM sodium chloride-8, 0.5mM DTT-9, 0.01mM DSS-10, 90% H2O/10% D2O' 2 '90% H2O/10% D2O' '0.3mM PUB1 RRM3-11, 25mM potassium phosphate-12, 25mM sodium chloride-13, 0.5mM DTT-14, 0.1mM DSS-15, 100% D2O' 3 '100% D2O' ;0.3mM [U-99% 13C; U-99% 15N] PUB1 RRM3-16, 25mM potassium phosphate-17, 25mM sodium chloride-18, 0.5mM DTT-19, 0.1mM DSS-20, 90% H2O/10% D2O ; 4 '90% H2O/10% D2O' # _pdbx_nmr_spectrometer.field_strength 800 _pdbx_nmr_spectrometer.manufacturer Bruker _pdbx_nmr_spectrometer.model AVANCE _pdbx_nmr_spectrometer.spectrometer_id 1 _pdbx_nmr_spectrometer.type 'BRUKER AVANCE' # _pdbx_nmr_refine.entry_id 2LA4 _pdbx_nmr_refine.method 'torsion angle dynamics' _pdbx_nmr_refine.details ? _pdbx_nmr_refine.software_ordinal 1 # _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.conformer_selection_criteria 'target function' _pdbx_nmr_ensemble.conformers_calculated_total_number 50 _pdbx_nmr_ensemble.conformers_submitted_total_number 20 _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.entry_id 2LA4 _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.representative_conformer 1 _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.entry_id 2LA4 _pdbx_nmr_representative.selection_criteria 'lowest energy' # loop_ _pdbx_nmr_software.authors _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.ordinal _pdbx_nmr_software.version 'CORNILESCU, DELAGLIO' refinement TALOS 1 ? 'Bruker Biospin' collection TopSpin 2 ? CCPN 'chemical shift assignment' 'CcpNmr Analysis' 3 ? CCPN 'peak picking' 'CcpNmr Analysis' 4 ? CCPN 'data analysis' 'CcpNmr Analysis' 5 ? 'Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax' processing NMRPipe 6 ? 'Guntert, Mumenthaler and Wuthrich' 'structure solution' CYANA 7 ? 'Koradi, Billeter and Wuthrich' 'structure analysis' MOLMOL 8 ? ? refinement CYANA 9 ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.crystals_number ? _exptl.details ? _exptl.entry_id 2LA4 _exptl.method 'SOLUTION NMR' _exptl.method_details ? # _struct.entry_id 2LA4 _struct.title 'NMR structure of the C-terminal RRM domain of poly(U) binding 1' _struct.pdbx_model_details 'lowest energy, model 1' _struct.pdbx_CASP_flag N _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2LA4 _struct_keywords.pdbx_keywords 'RNA BINDING PROTEIN' _struct_keywords.text 'RRM, RNA recognition, Stress granules, Nucleus, RNA-binding, Transcription, RNA BINDING PROTEIN' # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ASN A 12 ? ARG A 21 ? ASN A 325 ARG A 334 1 ? 10 HELX_P HELX_P2 2 THR A 40 ? ASN A 50 ? THR A 353 ASN A 363 1 ? 11 HELX_P HELX_P3 3 THR A 72 ? ALA A 84 ? THR A 385 ALA A 397 1 ? 13 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 3 ? B ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel B 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 THR A 29 ? GLY A 33 ? THR A 342 GLY A 346 A 2 CYS A 65 ? LYS A 69 ? CYS A 378 LYS A 382 A 3 ASP A 56 ? TYR A 60 ? ASP A 369 TYR A 373 B 1 PRO A 87 ? PHE A 88 ? PRO A 400 PHE A 401 B 2 ARG A 91 ? ASN A 92 ? ARG A 404 ASN A 405 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N ALA A 30 ? N ALA A 343 O ILE A 68 ? O ILE A 381 A 2 3 O PHE A 67 ? O PHE A 380 N LYS A 58 ? N LYS A 371 B 1 2 N PHE A 88 ? N PHE A 401 O ARG A 91 ? O ARG A 404 # _atom_sites.entry_id 2LA4 _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 314 314 GLY GLY A . n A 1 2 SER 2 315 315 SER SER A . n A 1 3 GLN 3 316 316 GLN GLN A . n A 1 4 THR 4 317 317 THR THR A . n A 1 5 ILE 5 318 318 ILE ILE A . n A 1 6 GLY 6 319 319 GLY GLY A . n A 1 7 LEU 7 320 320 LEU LEU A . n A 1 8 PRO 8 321 321 PRO PRO A . n A 1 9 PRO 9 322 322 PRO PRO A . n A 1 10 GLN 10 323 323 GLN GLN A . n A 1 11 VAL 11 324 324 VAL VAL A . n A 1 12 ASN 12 325 325 ASN ASN A . n A 1 13 PRO 13 326 326 PRO PRO A . n A 1 14 GLN 14 327 327 GLN GLN A . n A 1 15 ALA 15 328 328 ALA ALA A . n A 1 16 VAL 16 329 329 VAL VAL A . n A 1 17 ASP 17 330 330 ASP ASP A . n A 1 18 HIS 18 331 331 HIS HIS A . n A 1 19 ILE 19 332 332 ILE ILE A . n A 1 20 ILE 20 333 333 ILE ILE A . n A 1 21 ARG 21 334 334 ARG ARG A . n A 1 22 SER 22 335 335 SER SER A . n A 1 23 ALA 23 336 336 ALA ALA A . n A 1 24 PRO 24 337 337 PRO PRO A . n A 1 25 PRO 25 338 338 PRO PRO A . n A 1 26 ARG 26 339 339 ARG ARG A . n A 1 27 VAL 27 340 340 VAL VAL A . n A 1 28 THR 28 341 341 THR THR A . n A 1 29 THR 29 342 342 THR THR A . n A 1 30 ALA 30 343 343 ALA ALA A . n A 1 31 TYR 31 344 344 TYR TYR A . n A 1 32 ILE 32 345 345 ILE ILE A . n A 1 33 GLY 33 346 346 GLY GLY A . n A 1 34 ASN 34 347 347 ASN ASN A . n A 1 35 ILE 35 348 348 ILE ILE A . n A 1 36 PRO 36 349 349 PRO PRO A . n A 1 37 HIS 37 350 350 HIS HIS A . n A 1 38 PHE 38 351 351 PHE PHE A . n A 1 39 ALA 39 352 352 ALA ALA A . n A 1 40 THR 40 353 353 THR THR A . n A 1 41 GLU 41 354 354 GLU GLU A . n A 1 42 ALA 42 355 355 ALA ALA A . n A 1 43 ASP 43 356 356 ASP ASP A . n A 1 44 LEU 44 357 357 LEU LEU A . n A 1 45 ILE 45 358 358 ILE ILE A . n A 1 46 PRO 46 359 359 PRO PRO A . n A 1 47 LEU 47 360 360 LEU LEU A . n A 1 48 PHE 48 361 361 PHE PHE A . n A 1 49 GLN 49 362 362 GLN GLN A . n A 1 50 ASN 50 363 363 ASN ASN A . n A 1 51 PHE 51 364 364 PHE PHE A . n A 1 52 GLY 52 365 365 GLY GLY A . n A 1 53 PHE 53 366 366 PHE PHE A . n A 1 54 ILE 54 367 367 ILE ILE A . n A 1 55 LEU 55 368 368 LEU LEU A . n A 1 56 ASP 56 369 369 ASP ASP A . n A 1 57 PHE 57 370 370 PHE PHE A . n A 1 58 LYS 58 371 371 LYS LYS A . n A 1 59 HIS 59 372 372 HIS HIS A . n A 1 60 TYR 60 373 373 TYR TYR A . n A 1 61 PRO 61 374 374 PRO PRO A . n A 1 62 GLU 62 375 375 GLU GLU A . n A 1 63 LYS 63 376 376 LYS LYS A . n A 1 64 GLY 64 377 377 GLY GLY A . n A 1 65 CYS 65 378 378 CYS CYS A . n A 1 66 CYS 66 379 379 CYS CYS A . n A 1 67 PHE 67 380 380 PHE PHE A . n A 1 68 ILE 68 381 381 ILE ILE A . n A 1 69 LYS 69 382 382 LYS LYS A . n A 1 70 TYR 70 383 383 TYR TYR A . n A 1 71 ASP 71 384 384 ASP ASP A . n A 1 72 THR 72 385 385 THR THR A . n A 1 73 HIS 73 386 386 HIS HIS A . n A 1 74 GLU 74 387 387 GLU GLU A . n A 1 75 GLN 75 388 388 GLN GLN A . n A 1 76 ALA 76 389 389 ALA ALA A . n A 1 77 ALA 77 390 390 ALA ALA A . n A 1 78 VAL 78 391 391 VAL VAL A . n A 1 79 CYS 79 392 392 CYS CYS A . n A 1 80 ILE 80 393 393 ILE ILE A . n A 1 81 VAL 81 394 394 VAL VAL A . n A 1 82 ALA 82 395 395 ALA ALA A . n A 1 83 LEU 83 396 396 LEU LEU A . n A 1 84 ALA 84 397 397 ALA ALA A . n A 1 85 ASN 85 398 398 ASN ASN A . n A 1 86 PHE 86 399 399 PHE PHE A . n A 1 87 PRO 87 400 400 PRO PRO A . n A 1 88 PHE 88 401 401 PHE PHE A . n A 1 89 GLN 89 402 402 GLN GLN A . n A 1 90 GLY 90 403 403 GLY GLY A . n A 1 91 ARG 91 404 404 ARG ARG A . n A 1 92 ASN 92 405 405 ASN ASN A . n A 1 93 LEU 93 406 406 LEU LEU A . n A 1 94 ARG 94 407 407 ARG ARG A . n A 1 95 THR 95 408 408 THR THR A . n A 1 96 GLY 96 409 409 GLY GLY A . n A 1 97 TRP 97 410 410 TRP TRP A . n A 1 98 GLY 98 411 411 GLY GLY A . n A 1 99 LYS 99 412 412 LYS LYS A . n A 1 100 GLU 100 413 413 GLU GLU A . n A 1 101 ARG 101 414 414 ARG ARG A . n # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2011-09-28 2 'Structure model' 1 1 2012-06-27 3 'Structure model' 1 2 2023-06-14 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' 4 3 'Structure model' Other # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' database_2 2 3 'Structure model' pdbx_database_status 3 3 'Structure model' pdbx_nmr_software 4 3 'Structure model' pdbx_nmr_spectrometer 5 3 'Structure model' struct_ref_seq_dif # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_database_2.pdbx_DOI' 2 3 'Structure model' '_database_2.pdbx_database_accession' 3 3 'Structure model' '_pdbx_database_status.status_code_nmr_data' 4 3 'Structure model' '_pdbx_nmr_software.name' 5 3 'Structure model' '_pdbx_nmr_spectrometer.model' 6 3 'Structure model' '_struct_ref_seq_dif.details' # loop_ _pdbx_nmr_exptl_sample.component _pdbx_nmr_exptl_sample.concentration _pdbx_nmr_exptl_sample.concentration_range _pdbx_nmr_exptl_sample.concentration_units _pdbx_nmr_exptl_sample.isotopic_labeling _pdbx_nmr_exptl_sample.solution_id 'PUB1 RRM3-1' 0.3 ? mM '[U-99% 15N]' 1 'potassium phosphate-2' 25 ? mM ? 1 'sodium chloride-3' 25 ? mM ? 1 DTT-4 0.5 ? mM ? 1 DSS-5 0.01 ? mM ? 1 'PUB1 RRM3-6' 0.3 ? mM ? 2 'potassium phosphate-7' 25 ? mM ? 2 'sodium chloride-8' 25 ? mM ? 2 DTT-9 0.5 ? mM ? 2 DSS-10 0.01 ? mM ? 2 'PUB1 RRM3-11' 0.3 ? mM ? 3 'potassium phosphate-12' 25 ? mM ? 3 'sodium chloride-13' 25 ? mM ? 3 DTT-14 0.5 ? mM ? 3 DSS-15 0.1 ? mM ? 3 'PUB1 RRM3-16' 0.3 ? mM '[U-99% 13C; U-99% 15N]' 4 'potassium phosphate-17' 25 ? mM ? 4 'sodium chloride-18' 25 ? mM ? 4 DTT-19 0.5 ? mM ? 4 DSS-20 0.1 ? mM ? 4 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 LEU A 320 ? ? -116.51 77.50 2 1 VAL A 324 ? ? 67.56 142.14 3 1 GLN A 327 ? ? -71.99 -71.93 4 1 ASN A 347 ? ? 71.45 46.59 5 1 ASP A 369 ? ? -170.96 120.74 6 2 GLN A 316 ? ? -124.93 -54.15 7 2 THR A 317 ? ? 64.99 116.25 8 2 LEU A 320 ? ? 65.28 67.54 9 2 VAL A 324 ? ? -38.22 158.14 10 2 GLN A 327 ? ? -72.86 -72.03 11 2 ARG A 339 ? ? -119.93 76.45 12 2 VAL A 340 ? ? -179.62 141.84 13 2 PHE A 351 ? ? -89.88 31.87 14 2 GLU A 413 ? ? -36.53 113.39 15 3 SER A 315 ? ? -124.63 -68.16 16 3 GLN A 316 ? ? -179.94 -42.87 17 3 ILE A 318 ? ? -168.16 -45.63 18 3 GLN A 323 ? ? 169.83 94.26 19 3 GLN A 327 ? ? -70.99 -71.63 20 3 SER A 335 ? ? -105.02 44.75 21 3 ALA A 336 ? ? 167.32 147.31 22 3 ASN A 347 ? ? 76.14 44.71 23 3 ASP A 369 ? ? -170.15 120.91 24 3 TRP A 410 ? ? -33.59 144.47 25 4 LEU A 320 ? ? 51.67 73.02 26 4 GLN A 323 ? ? -155.27 -66.89 27 4 GLN A 327 ? ? -73.12 -72.39 28 4 ARG A 339 ? ? -92.25 37.11 29 4 ASN A 347 ? ? 74.99 55.47 30 4 ASP A 369 ? ? -171.02 120.83 31 4 GLU A 413 ? ? -55.47 82.54 32 5 SER A 315 ? ? 51.67 19.52 33 5 GLN A 316 ? ? 47.39 92.22 34 5 ILE A 318 ? ? -172.80 -44.34 35 5 GLN A 323 ? ? -166.22 -40.00 36 5 GLN A 327 ? ? -72.34 -71.61 37 5 ALA A 336 ? ? 177.80 164.49 38 5 ARG A 339 ? ? -97.57 53.68 39 5 ASN A 347 ? ? 76.62 45.89 40 5 ASP A 369 ? ? -170.92 120.62 41 5 LYS A 412 ? ? -163.01 81.60 42 6 THR A 317 ? ? -90.70 -75.71 43 6 ILE A 318 ? ? -168.37 -50.92 44 6 LEU A 320 ? ? 79.36 52.42 45 6 GLN A 323 ? ? -175.98 86.74 46 6 GLN A 327 ? ? -71.95 -72.00 47 6 SER A 335 ? ? -101.45 41.69 48 6 ALA A 336 ? ? 170.59 157.05 49 6 ARG A 339 ? ? -100.82 66.00 50 6 VAL A 340 ? ? -171.39 131.72 51 6 ASN A 347 ? ? 78.95 49.76 52 6 ASP A 369 ? ? -170.30 121.08 53 6 ASN A 398 ? ? 34.50 42.67 54 6 TRP A 410 ? ? -35.11 137.72 55 7 VAL A 324 ? ? 64.87 132.36 56 7 GLN A 327 ? ? -75.20 -72.67 57 7 ASN A 347 ? ? 70.68 53.23 58 7 ASP A 369 ? ? -170.94 121.19 59 7 TRP A 410 ? ? -68.94 88.22 60 8 SER A 315 ? ? -126.86 -82.90 61 8 THR A 317 ? ? 48.50 -173.68 62 8 LEU A 320 ? ? 56.09 74.27 63 8 GLN A 323 ? ? -154.82 -42.95 64 8 GLN A 327 ? ? -69.89 -71.93 65 8 PHE A 351 ? ? -85.14 33.16 66 8 TRP A 410 ? ? -31.76 113.93 67 8 GLU A 413 ? ? -104.61 45.54 68 9 THR A 317 ? ? -42.22 162.38 69 9 LEU A 320 ? ? -176.97 75.22 70 9 VAL A 324 ? ? 45.05 -171.74 71 9 GLN A 327 ? ? -68.86 -71.64 72 9 ASN A 347 ? ? 81.14 50.77 73 9 ASP A 369 ? ? -170.93 120.74 74 9 GLU A 413 ? ? -36.63 126.91 75 10 GLN A 316 ? ? -166.60 -59.15 76 10 THR A 317 ? ? 51.38 178.52 77 10 LEU A 320 ? ? -177.77 140.47 78 10 VAL A 324 ? ? 28.27 75.38 79 10 GLN A 327 ? ? -73.55 -72.22 80 10 ARG A 339 ? ? -106.61 67.33 81 10 VAL A 340 ? ? 177.14 134.85 82 10 LYS A 412 ? ? -163.25 79.04 83 10 GLU A 413 ? ? 35.33 45.72 84 11 SER A 315 ? ? 176.45 174.72 85 11 GLN A 316 ? ? -144.64 36.65 86 11 ILE A 318 ? ? -36.58 142.49 87 11 LEU A 320 ? ? 47.65 82.71 88 11 PRO A 322 ? ? -69.72 6.98 89 11 GLN A 323 ? ? 84.61 41.66 90 11 GLN A 327 ? ? -71.65 -72.17 91 11 GLU A 413 ? ? 31.54 51.21 92 12 SER A 315 ? ? -164.79 -54.66 93 12 GLN A 316 ? ? -103.93 75.46 94 12 PRO A 322 ? ? -69.72 3.34 95 12 GLN A 323 ? ? -89.26 -72.22 96 12 GLN A 327 ? ? -69.81 -72.61 97 12 ASN A 347 ? ? 81.09 50.97 98 12 ASP A 369 ? ? -171.27 120.80 99 12 ALA A 397 ? ? -59.23 108.43 100 12 TRP A 410 ? ? 56.84 155.15 101 13 GLN A 316 ? ? -106.16 -61.49 102 13 THR A 317 ? ? 45.83 -163.49 103 13 ASN A 325 ? ? -50.63 107.39 104 13 GLN A 327 ? ? -76.32 -71.97 105 13 ARG A 339 ? ? -109.25 63.47 106 13 VAL A 340 ? ? -175.15 126.49 107 13 TRP A 410 ? ? -33.83 126.07 108 13 LYS A 412 ? ? -170.89 106.39 109 13 GLU A 413 ? ? -60.00 82.38 110 14 GLN A 316 ? ? -47.32 173.14 111 14 ILE A 318 ? ? -162.88 -43.74 112 14 LEU A 320 ? ? 62.93 81.00 113 14 GLN A 323 ? ? -127.62 -70.16 114 14 GLN A 327 ? ? -70.58 -72.08 115 14 ALA A 336 ? ? 179.56 164.44 116 14 ARG A 339 ? ? -104.24 73.51 117 14 ASP A 369 ? ? -170.35 121.22 118 14 TRP A 410 ? ? 57.34 153.01 119 15 ILE A 318 ? ? -174.36 133.46 120 15 LEU A 320 ? ? 52.76 71.29 121 15 VAL A 324 ? ? -51.77 -173.63 122 15 GLN A 327 ? ? -68.62 -71.44 123 15 ARG A 339 ? ? -101.21 55.05 124 15 ASN A 347 ? ? 72.22 54.19 125 15 ASP A 369 ? ? -170.72 121.33 126 15 ALA A 397 ? ? -50.66 108.44 127 15 TRP A 410 ? ? -33.00 131.06 128 16 SER A 315 ? ? -127.67 -53.86 129 16 GLN A 316 ? ? 176.36 109.67 130 16 LEU A 320 ? ? 66.04 75.67 131 16 GLN A 323 ? ? -133.65 -63.49 132 16 ASN A 325 ? ? -50.39 109.14 133 16 GLN A 327 ? ? -74.94 -71.62 134 16 ARG A 339 ? ? -115.41 64.10 135 16 THR A 341 ? ? -150.96 69.20 136 16 PHE A 351 ? ? -90.85 30.74 137 16 GLU A 413 ? ? 36.80 31.42 138 17 GLN A 316 ? ? 74.90 -69.91 139 17 THR A 317 ? ? -59.27 88.22 140 17 LEU A 320 ? ? 58.94 84.18 141 17 PRO A 322 ? ? -69.80 3.13 142 17 GLN A 323 ? ? -90.74 -70.79 143 17 GLN A 327 ? ? -70.12 -72.28 144 17 ARG A 339 ? ? -101.86 51.00 145 17 VAL A 340 ? ? -175.90 128.56 146 17 ASN A 347 ? ? 79.24 49.26 147 17 ASP A 369 ? ? -171.15 121.15 148 17 TRP A 410 ? ? 58.69 147.75 149 18 SER A 315 ? ? 61.51 143.44 150 18 ILE A 318 ? ? 82.16 147.46 151 18 GLN A 323 ? ? -137.95 -92.05 152 18 GLN A 327 ? ? -68.41 -71.84 153 18 ARG A 339 ? ? -106.01 55.75 154 18 THR A 341 ? ? -113.34 67.73 155 18 ASN A 363 ? ? -49.96 -19.38 156 18 ASP A 369 ? ? -170.48 121.31 157 18 LYS A 412 ? ? -151.38 80.80 158 18 GLU A 413 ? ? -36.08 133.72 159 19 SER A 315 ? ? 63.13 144.11 160 19 GLN A 316 ? ? -173.38 94.38 161 19 LEU A 320 ? ? 168.03 82.92 162 19 GLN A 327 ? ? -74.69 -72.36 163 19 VAL A 340 ? ? -178.20 127.64 164 19 ASN A 347 ? ? 82.82 45.60 165 19 PHE A 351 ? ? -86.10 33.30 166 19 ASP A 369 ? ? -170.76 120.90 167 19 ALA A 397 ? ? -50.21 108.38 168 19 TRP A 410 ? ? -33.80 130.73 169 19 GLU A 413 ? ? -55.42 107.34 170 20 GLN A 316 ? ? -158.14 42.28 171 20 ILE A 318 ? ? -178.62 143.96 172 20 VAL A 324 ? ? 69.75 139.22 173 20 GLN A 327 ? ? -70.27 -72.16 174 20 SER A 335 ? ? -107.10 42.02 175 20 ALA A 336 ? ? 178.35 162.83 176 20 ARG A 339 ? ? -112.53 73.91 177 20 PHE A 351 ? ? -85.47 32.23 178 20 ASP A 369 ? ? -170.58 120.81 179 20 TRP A 410 ? ? -31.07 121.29 180 20 GLU A 413 ? ? -34.44 -87.31 #