HEADER IMMUNE SYSTEM 28-MAR-12 2LRA TITLE NMR STRUCTURE OF SIGNAL SEQUENCE DELETED (SSD) RV0603 PROTEIN FROM TITLE 2 MYCOBACTERIUM TUBERCULOSIS WITHOUT N-TERMINAL HIS-TAG COMPND MOL_ID: 1; COMPND 2 MOLECULE: POSSIBLE EXPORTED PROTEIN; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 28-103; COMPND 5 SYNONYM: RV0603-SSD; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MYCOBACTERIUM TUBERCULOSIS; SOURCE 3 ORGANISM_TAXID: 1773; SOURCE 4 GENE: RV0603; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: K12; SOURCE 8 EXPRESSION_SYSTEM_VARIANT: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: VECTOR; SOURCE 10 EXPRESSION_SYSTEM_VECTOR: PET-NH6 KEYWDS SSD, IMMUNE SYSTEM EXPDTA SOLUTION NMR NUMMDL 10 AUTHOR S.TRIPATHI,S.PULAVARTI,R.YADAV,A.JAIN,P.PATHAK,A.MEHER,A.ARORA REVDAT 2 14-JUN-23 2LRA 1 SEQADV REVDAT 1 22-MAY-13 2LRA 0 JRNL AUTH S.TRIPATHI,S.PULAVARTI,R.YADAV,A.JAIN,P.PATHAK,A.MEHER, JRNL AUTH 2 A.ARORA JRNL TITL NMR STRUCTURE OF SIGNAL SEQUENCE DELETED (SSD) RV0603 JRNL TITL 2 PROTEIN FROM MYCOBACTERIUM TUBERCULOSIS WITHOUT N-TERMINAL JRNL TITL 3 HIS-TAG JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CYANA3.0, CNS SOLVE_1.21 REMARK 3 AUTHORS : GUNTERT, MUMENTHALER AND WUTHRICH (CYANA3.0), REMARK 3 BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE-KUNSTLEVE,JIANG,KUSZEWSKI, REMARK 3 NILGES, PANNU,READ,RICE,SIMONSON,WARREN (CNS) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2LRA COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 10-APR-12. REMARK 100 THE DEPOSITION ID IS D_1000102734. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 6.5 REMARK 210 IONIC STRENGTH : 50 REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 20 MM SODIUM PHOSPHATE-1, 50 MM REMARK 210 SODIUM CHLORIDE-2, 0.1 % SODIUM REMARK 210 AZIDE-3, 1 MM AEBSF PROTEASE REMARK 210 INHIBITOR-4, 1 MM [U-99% 15N] REMARK 210 RV0603-SSD-5, 93% H2O/7% D2O; 20 REMARK 210 MM SODIUM PHOSPHATE-6, 50 MM REMARK 210 SODIUM CHLORIDE-7, 0.1 % SODIUM REMARK 210 AZIDE-8, 1 MM AEBSF PROTEASE REMARK 210 INHIBITOR-9, 1 MM [U-99% 13C; U- REMARK 210 99% 15N] RV0603-SSD-10, 93% H2O/ REMARK 210 7% D2O; 20 MM SODIUM PHOSPHATE- REMARK 210 11, 50 MM SODIUM CHLORIDE-12, REMARK 210 0.1 % SODIUM AZIDE-13, 1 MM REMARK 210 AEBSF PROTEASE INHIBITOR-14, 1 REMARK 210 MM [U-99% 13C; U-99% 15N] RV0603- REMARK 210 SSD-15, 100% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D 1H-15N HSQC; 3D HNCACB; 3D REMARK 210 CBCA(CO)NH; 3D HNCO; 3D HN(CO)CA; REMARK 210 3D H(CCO)NH; 3D C(CO)NH; 3D REMARK 210 HCCH-TOCSY; 2D 1H-13C HSQC REMARK 210 ALIPHATIC; 2D 1H-13C HSQC REMARK 210 AROMATIC; 2D CB(CGCD)HD; 2D REMARK 210 CB(CGCE)HE; 2D 1H-1H NOESY REMARK 210 AROMATIC; 3D 1H-15N NOESY; 3D 1H- REMARK 210 13C NOESY ALIPHATIC; 3D 1H-13C REMARK 210 NOESY AROMATIC REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ REMARK 210 SPECTROMETER MODEL : INOVA REMARK 210 SPECTROMETER MANUFACTURER : VARIAN REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : PSVS 1.4 REMARK 210 METHOD USED : WATER REFINEMENT REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 200 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 10 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST REMARK 210 ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 HG22 VAL A 11 HB2 ASP A 17 1.26 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 ASP A 6 -74.50 -131.96 REMARK 500 1 GLU A 38 -166.61 -79.79 REMARK 500 2 ASP A 6 101.77 63.91 REMARK 500 2 GLU A 10 97.36 -65.56 REMARK 500 2 PRO A 14 -70.15 -54.67 REMARK 500 2 PRO A 53 -9.56 -57.93 REMARK 500 3 PHE A 5 57.50 -113.12 REMARK 500 3 LEU A 69 -64.25 -101.19 REMARK 500 4 PHE A 5 58.14 -117.55 REMARK 500 4 ALA A 45 -36.93 -149.11 REMARK 500 4 PRO A 53 17.95 -68.88 REMARK 500 4 LEU A 69 -62.58 -96.18 REMARK 500 5 ASP A 6 -142.75 -147.83 REMARK 500 5 VAL A 11 96.18 -60.14 REMARK 500 5 ALA A 43 -38.76 -175.13 REMARK 500 5 ALA A 45 -36.40 -139.78 REMARK 500 5 ASP A 70 -179.34 -170.35 REMARK 500 6 ASP A 6 95.05 175.60 REMARK 500 6 PRO A 53 1.78 -68.20 REMARK 500 7 ASP A 6 110.98 67.62 REMARK 500 7 LEU A 69 -60.01 -90.93 REMARK 500 8 PHE A 5 54.69 -113.91 REMARK 500 8 ASP A 6 101.01 174.23 REMARK 500 8 PRO A 14 -142.20 -73.29 REMARK 500 9 ASP A 6 -58.07 -127.11 REMARK 500 9 PRO A 14 -76.73 -76.14 REMARK 500 10 ASP A 6 -77.97 -150.29 REMARK 500 10 PRO A 28 96.02 -69.21 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 18355 RELATED DB: BMRB DBREF 2LRA A 4 79 UNP O07775 O07775_MYCTU 28 103 SEQADV 2LRA GLY A 1 UNP O07775 EXPRESSION TAG SEQADV 2LRA ALA A 2 UNP O07775 EXPRESSION TAG SEQADV 2LRA MET A 3 UNP O07775 EXPRESSION TAG SEQADV 2LRA LEU A 80 UNP O07775 EXPRESSION TAG SEQADV 2LRA GLU A 81 UNP O07775 EXPRESSION TAG SEQRES 1 A 81 GLY ALA MET ALA PHE ASP GLY GLU ASP GLU VAL THR GLY SEQRES 2 A 81 PRO ASP ALA ASP ARG ALA ARG ALA ALA ALA VAL GLN ALA SEQRES 3 A 81 VAL PRO GLY GLY THR ALA GLY GLU VAL GLU THR GLU THR SEQRES 4 A 81 GLY GLU GLY ALA ALA ALA TYR GLY VAL LEU VAL THR ARG SEQRES 5 A 81 PRO ASP GLY THR ARG VAL GLU VAL HIS LEU ASP ARG ASP SEQRES 6 A 81 PHE ARG VAL LEU ASP THR GLU PRO ALA ASP GLY ASP GLY SEQRES 7 A 81 GLY LEU GLU HELIX 1 1 PRO A 14 GLN A 25 1 12 SHEET 1 A 3 THR A 31 ALA A 32 0 SHEET 2 A 3 TYR A 46 ARG A 52 -1 O THR A 51 N THR A 31 SHEET 3 A 3 GLU A 36 THR A 37 -1 N GLU A 36 O GLY A 47 SHEET 1 B 4 THR A 31 ALA A 32 0 SHEET 2 B 4 TYR A 46 ARG A 52 -1 O THR A 51 N THR A 31 SHEET 3 B 4 THR A 56 LEU A 62 -1 O VAL A 60 N VAL A 48 SHEET 4 B 4 VAL A 68 PRO A 73 -1 O LEU A 69 N HIS A 61 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1