data_2LXI # _entry.id 2LXI # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.371 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2LXI pdb_00002lxi 10.2210/pdb2lxi/pdb RCSB RCSB102955 ? ? BMRB 18678 ? ? WWPDB D_1000102955 ? ? # loop_ _pdbx_database_related.db_id _pdbx_database_related.db_name _pdbx_database_related.content_type _pdbx_database_related.details 18678 BMRB unspecified . JCSG-421711 TargetTrack unspecified . # _pdbx_database_status.deposit_site BMRB _pdbx_database_status.entry_id 2LXI _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2012-08-27 _pdbx_database_status.SG_entry Y _pdbx_database_status.status_code REL _pdbx_database_status.status_code_mr REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_cs REL _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data REL # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Serrano, P.' 1 'Geralt, M.' 2 'Dutta, S.K.' 3 'Wuthrich, K.' 4 'Joint Center for Structural Genomics (JCSG)' 5 'Partnership for T-Cell Biology (TCELL)' 6 # _citation.id primary _citation.title 'NMR structure of the N-terminal RNA Binding domain 1 (RRM1) of the protein RBM10 from Homo sapiens' _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Serrano, P.' 1 ? primary 'Wuthrich, K.' 2 ? # _cell.entry_id 2LXI _cell.length_a 1.000 _cell.length_b 1.000 _cell.length_c 1.000 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 1 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2LXI _symmetry.space_group_name_H-M 'P 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 # _entity.id 1 _entity.type polymer _entity.src_method man _entity.pdbx_description 'RNA-binding protein 10' _entity.formula_weight 10479.848 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment 'RRM 1 domain residues 128-218' _entity.details ? # _entity_name_com.entity_id 1 _entity_name_com.name 'G patch domain-containing protein 9, RNA-binding motif protein 10, RNA-binding protein S1-1, S1-1' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;SNIVMLRMLPQAATEDDIRGQLQSHGVQAREVRLMRNKSSGQSRGFAFVEFSHLQDATRWMEANQHSLNILGQKVSMHYS DPKPKINEDWL ; _entity_poly.pdbx_seq_one_letter_code_can ;SNIVMLRMLPQAATEDDIRGQLQSHGVQAREVRLMRNKSSGQSRGFAFVEFSHLQDATRWMEANQHSLNILGQKVSMHYS DPKPKINEDWL ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier JCSG-421711 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 SER n 1 2 ASN n 1 3 ILE n 1 4 VAL n 1 5 MET n 1 6 LEU n 1 7 ARG n 1 8 MET n 1 9 LEU n 1 10 PRO n 1 11 GLN n 1 12 ALA n 1 13 ALA n 1 14 THR n 1 15 GLU n 1 16 ASP n 1 17 ASP n 1 18 ILE n 1 19 ARG n 1 20 GLY n 1 21 GLN n 1 22 LEU n 1 23 GLN n 1 24 SER n 1 25 HIS n 1 26 GLY n 1 27 VAL n 1 28 GLN n 1 29 ALA n 1 30 ARG n 1 31 GLU n 1 32 VAL n 1 33 ARG n 1 34 LEU n 1 35 MET n 1 36 ARG n 1 37 ASN n 1 38 LYS n 1 39 SER n 1 40 SER n 1 41 GLY n 1 42 GLN n 1 43 SER n 1 44 ARG n 1 45 GLY n 1 46 PHE n 1 47 ALA n 1 48 PHE n 1 49 VAL n 1 50 GLU n 1 51 PHE n 1 52 SER n 1 53 HIS n 1 54 LEU n 1 55 GLN n 1 56 ASP n 1 57 ALA n 1 58 THR n 1 59 ARG n 1 60 TRP n 1 61 MET n 1 62 GLU n 1 63 ALA n 1 64 ASN n 1 65 GLN n 1 66 HIS n 1 67 SER n 1 68 LEU n 1 69 ASN n 1 70 ILE n 1 71 LEU n 1 72 GLY n 1 73 GLN n 1 74 LYS n 1 75 VAL n 1 76 SER n 1 77 MET n 1 78 HIS n 1 79 TYR n 1 80 SER n 1 81 ASP n 1 82 PRO n 1 83 LYS n 1 84 PRO n 1 85 LYS n 1 86 ILE n 1 87 ASN n 1 88 GLU n 1 89 ASP n 1 90 TRP n 1 91 LEU n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'RBM10, DXS8237E, GPATC9, GPATCH9, KIAA0122' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector pSpeedET _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code RBM10_HUMAN _struct_ref.pdbx_db_accession P98175 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;SNIVMLRMLPQAATEDDIRGQLQSHGVQAREVRLMRNKSSGQSRGFAFVEFSHLQDATRWMEANQHSLNILGQKVSMHYS DPKPKINEDWL ; _struct_ref.pdbx_align_begin 128 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 2LXI _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 91 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P98175 _struct_ref_seq.db_align_beg 128 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 218 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 91 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.solution_id _pdbx_nmr_exptl.type 1 1 1 '2D 1H-15N HSQC' 1 2 1 '3D 1H-13C NOESY aliphatic' 1 3 1 '3D 1H-13C NOESY aromatic' 1 4 1 '3D 1H-15N NOESY' 1 5 1 'APSY 4D-HACANH' 1 6 1 'APSY 5D-CBCACONH' 1 7 1 'APSY 5D-HACACONH' # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.ionic_strength 0.220 _pdbx_nmr_exptl_sample_conditions.pH 6.5 _pdbx_nmr_exptl_sample_conditions.pressure ambient _pdbx_nmr_exptl_sample_conditions.pressure_units ? _pdbx_nmr_exptl_sample_conditions.temperature 298 _pdbx_nmr_exptl_sample_conditions.temperature_units K # _pdbx_nmr_sample_details.contents '1.2 mM [U-98% 13C; U-98% 15N] protein, 50 mM sodium chloride, 20 mM sodium phosphate, 5 mM sodium azide, 95% H2O/5% D2O' _pdbx_nmr_sample_details.solution_id 1 _pdbx_nmr_sample_details.solvent_system '95% H2O/5% D2O' # loop_ _pdbx_nmr_spectrometer.field_strength _pdbx_nmr_spectrometer.manufacturer _pdbx_nmr_spectrometer.model _pdbx_nmr_spectrometer.spectrometer_id _pdbx_nmr_spectrometer.type 600 Bruker AVANCE 1 'Bruker Avance' 800 Bruker AVANCE 2 'Bruker Avance' # _pdbx_nmr_refine.entry_id 2LXI _pdbx_nmr_refine.method 'molecular dynamics' _pdbx_nmr_refine.details ? _pdbx_nmr_refine.software_ordinal 1 # _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.conformer_selection_criteria 'target function' _pdbx_nmr_ensemble.conformers_calculated_total_number 80 _pdbx_nmr_ensemble.conformers_submitted_total_number 19 _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.entry_id 2LXI _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.entry_id 2LXI _pdbx_nmr_representative.selection_criteria 'lowest energy' # loop_ _pdbx_nmr_software.authors _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.ordinal 'Guntert P.' refinement CYANA ? 1 'LUGINB, H.L., WUTHRICH, K.' refinement OPALp ? 2 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.crystals_number ? _exptl.details ? _exptl.entry_id 2LXI _exptl.method 'SOLUTION NMR' _exptl.method_details ? # _struct.entry_id 2LXI _struct.title 'NMR structure of the N-terminal RNA Binding domain 1 (RRM1) of the protein RBM10 from Homo sapiens' _struct.pdbx_model_details 'lowest energy, model 1' _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2LXI _struct_keywords.pdbx_keywords 'RNA BINDING PROTEIN' _struct_keywords.text ;RNA binding, RNA BINDING PROTEIN, Structural Genomics, PSI-Biology, Joint Center for Structural Genomics, JCSG, Partnership for T-Cell Biology, TCELL ; # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 THR A 14 ? GLY A 26 ? THR A 14 GLY A 26 1 ? 13 HELX_P HELX_P2 2 HIS A 53 ? ALA A 63 ? HIS A 53 ALA A 63 1 ? 11 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 4 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 PHE A 46 ? GLU A 50 ? PHE A 46 GLU A 50 A 2 ILE A 3 ? ARG A 7 ? ILE A 3 ARG A 7 A 3 GLN A 73 ? HIS A 78 ? GLN A 73 HIS A 78 A 4 SER A 67 ? ILE A 70 ? SER A 67 ILE A 70 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O VAL A 49 ? O VAL A 49 N VAL A 4 ? N VAL A 4 A 2 3 N MET A 5 ? N MET A 5 O HIS A 78 ? O HIS A 78 A 3 4 O VAL A 75 ? O VAL A 75 N LEU A 68 ? N LEU A 68 # _atom_sites.entry_id 2LXI _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 SER 1 1 1 SER SER A . n A 1 2 ASN 2 2 2 ASN ASN A . n A 1 3 ILE 3 3 3 ILE ILE A . n A 1 4 VAL 4 4 4 VAL VAL A . n A 1 5 MET 5 5 5 MET MET A . n A 1 6 LEU 6 6 6 LEU LEU A . n A 1 7 ARG 7 7 7 ARG ARG A . n A 1 8 MET 8 8 8 MET MET A . n A 1 9 LEU 9 9 9 LEU LEU A . n A 1 10 PRO 10 10 10 PRO PRO A . n A 1 11 GLN 11 11 11 GLN GLN A . n A 1 12 ALA 12 12 12 ALA ALA A . n A 1 13 ALA 13 13 13 ALA ALA A . n A 1 14 THR 14 14 14 THR THR A . n A 1 15 GLU 15 15 15 GLU GLU A . n A 1 16 ASP 16 16 16 ASP ASP A . n A 1 17 ASP 17 17 17 ASP ASP A . n A 1 18 ILE 18 18 18 ILE ILE A . n A 1 19 ARG 19 19 19 ARG ARG A . n A 1 20 GLY 20 20 20 GLY GLY A . n A 1 21 GLN 21 21 21 GLN GLN A . n A 1 22 LEU 22 22 22 LEU LEU A . n A 1 23 GLN 23 23 23 GLN GLN A . n A 1 24 SER 24 24 24 SER SER A . n A 1 25 HIS 25 25 25 HIS HIS A . n A 1 26 GLY 26 26 26 GLY GLY A . n A 1 27 VAL 27 27 27 VAL VAL A . n A 1 28 GLN 28 28 28 GLN GLN A . n A 1 29 ALA 29 29 29 ALA ALA A . n A 1 30 ARG 30 30 30 ARG ARG A . n A 1 31 GLU 31 31 31 GLU GLU A . n A 1 32 VAL 32 32 32 VAL VAL A . n A 1 33 ARG 33 33 33 ARG ARG A . n A 1 34 LEU 34 34 34 LEU LEU A . n A 1 35 MET 35 35 35 MET MET A . n A 1 36 ARG 36 36 36 ARG ARG A . n A 1 37 ASN 37 37 37 ASN ASN A . n A 1 38 LYS 38 38 38 LYS LYS A . n A 1 39 SER 39 39 39 SER SER A . n A 1 40 SER 40 40 40 SER SER A . n A 1 41 GLY 41 41 41 GLY GLY A . n A 1 42 GLN 42 42 42 GLN GLN A . n A 1 43 SER 43 43 43 SER SER A . n A 1 44 ARG 44 44 44 ARG ARG A . n A 1 45 GLY 45 45 45 GLY GLY A . n A 1 46 PHE 46 46 46 PHE PHE A . n A 1 47 ALA 47 47 47 ALA ALA A . n A 1 48 PHE 48 48 48 PHE PHE A . n A 1 49 VAL 49 49 49 VAL VAL A . n A 1 50 GLU 50 50 50 GLU GLU A . n A 1 51 PHE 51 51 51 PHE PHE A . n A 1 52 SER 52 52 52 SER SER A . n A 1 53 HIS 53 53 53 HIS HIS A . n A 1 54 LEU 54 54 54 LEU LEU A . n A 1 55 GLN 55 55 55 GLN GLN A . n A 1 56 ASP 56 56 56 ASP ASP A . n A 1 57 ALA 57 57 57 ALA ALA A . n A 1 58 THR 58 58 58 THR THR A . n A 1 59 ARG 59 59 59 ARG ARG A . n A 1 60 TRP 60 60 60 TRP TRP A . n A 1 61 MET 61 61 61 MET MET A . n A 1 62 GLU 62 62 62 GLU GLU A . n A 1 63 ALA 63 63 63 ALA ALA A . n A 1 64 ASN 64 64 64 ASN ASN A . n A 1 65 GLN 65 65 65 GLN GLN A . n A 1 66 HIS 66 66 66 HIS HIS A . n A 1 67 SER 67 67 67 SER SER A . n A 1 68 LEU 68 68 68 LEU LEU A . n A 1 69 ASN 69 69 69 ASN ASN A . n A 1 70 ILE 70 70 70 ILE ILE A . n A 1 71 LEU 71 71 71 LEU LEU A . n A 1 72 GLY 72 72 72 GLY GLY A . n A 1 73 GLN 73 73 73 GLN GLN A . n A 1 74 LYS 74 74 74 LYS LYS A . n A 1 75 VAL 75 75 75 VAL VAL A . n A 1 76 SER 76 76 76 SER SER A . n A 1 77 MET 77 77 77 MET MET A . n A 1 78 HIS 78 78 78 HIS HIS A . n A 1 79 TYR 79 79 79 TYR TYR A . n A 1 80 SER 80 80 80 SER SER A . n A 1 81 ASP 81 81 81 ASP ASP A . n A 1 82 PRO 82 82 82 PRO PRO A . n A 1 83 LYS 83 83 83 LYS LYS A . n A 1 84 PRO 84 84 84 PRO PRO A . n A 1 85 LYS 85 85 85 LYS LYS A . n A 1 86 ILE 86 86 86 ILE ILE A . n A 1 87 ASN 87 87 87 ASN ASN A . n A 1 88 GLU 88 88 88 GLU GLU A . n A 1 89 ASP 89 89 89 ASP ASP A . n A 1 90 TRP 90 90 90 TRP TRP A . n A 1 91 LEU 91 91 91 LEU LEU A . n # loop_ _pdbx_SG_project.full_name_of_center _pdbx_SG_project.id _pdbx_SG_project.initial_of_center _pdbx_SG_project.project_name 'Joint Center for Structural Genomics' 1 JCSG PSI:Biology 'Partnership for T-Cell Biology' 2 TCELL PSI:Biology # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2012-10-10 2 'Structure model' 1 1 2013-06-12 3 'Structure model' 1 2 2023-06-14 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Structure summary' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' 4 3 'Structure model' Other # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' database_2 2 3 'Structure model' pdbx_database_status 3 3 'Structure model' pdbx_nmr_software 4 3 'Structure model' pdbx_nmr_spectrometer # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_database_2.pdbx_DOI' 2 3 'Structure model' '_database_2.pdbx_database_accession' 3 3 'Structure model' '_pdbx_database_status.status_code_nmr_data' 4 3 'Structure model' '_pdbx_nmr_software.name' 5 3 'Structure model' '_pdbx_nmr_spectrometer.model' # loop_ _pdbx_nmr_exptl_sample.component _pdbx_nmr_exptl_sample.concentration _pdbx_nmr_exptl_sample.concentration_range _pdbx_nmr_exptl_sample.concentration_units _pdbx_nmr_exptl_sample.isotopic_labeling _pdbx_nmr_exptl_sample.solution_id entity-1 1.2 ? mM '[U-98% 13C; U-98% 15N]' 1 'sodium chloride-2' 50 ? mM ? 1 'sodium phosphate-3' 20 ? mM ? 1 'sodium azide-4' 5 ? mM ? 1 # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 6 NE A ARG 59 ? ? CZ A ARG 59 ? ? NH2 A ARG 59 ? ? 116.73 120.30 -3.57 0.50 N 2 7 CA A VAL 49 ? ? CB A VAL 49 ? ? CG1 A VAL 49 ? ? 121.26 110.90 10.36 1.50 N 3 9 NE A ARG 36 ? ? CZ A ARG 36 ? ? NH2 A ARG 36 ? ? 117.11 120.30 -3.19 0.50 N 4 9 CB A TYR 79 ? ? CG A TYR 79 ? ? CD2 A TYR 79 ? ? 116.66 121.00 -4.34 0.60 N 5 12 CA A MET 35 ? ? CB A MET 35 ? ? CG A MET 35 ? ? 125.04 113.30 11.74 1.70 N 6 15 CB A HIS 25 ? ? CG A HIS 25 ? ? CD2 A HIS 25 ? ? 118.85 129.70 -10.85 1.60 N 7 19 CB A TYR 79 ? ? CG A TYR 79 ? ? CD2 A TYR 79 ? ? 116.02 121.00 -4.98 0.60 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 MET A 35 ? ? 43.87 -154.51 2 1 ARG A 36 ? ? 75.71 -48.44 3 1 LYS A 38 ? ? 47.05 -66.50 4 1 GLN A 42 ? ? -65.47 4.00 5 1 SER A 43 ? ? -110.21 72.13 6 1 ASP A 89 ? ? -144.56 11.61 7 2 ASN A 2 ? ? -143.00 13.36 8 2 VAL A 4 ? ? -118.18 72.21 9 2 ALA A 29 ? ? 50.50 173.26 10 2 MET A 35 ? ? -54.32 87.54 11 2 ARG A 36 ? ? -140.53 -74.28 12 2 ASN A 37 ? ? -64.24 94.37 13 2 ARG A 44 ? ? -153.53 0.21 14 2 MET A 61 ? ? -52.57 -70.45 15 2 LEU A 71 ? ? 64.95 -15.55 16 2 LYS A 83 ? ? 58.10 164.95 17 2 GLU A 88 ? ? 44.80 71.17 18 3 ASN A 2 ? ? 76.34 -2.51 19 3 MET A 8 ? ? 67.48 62.56 20 3 ALA A 29 ? ? 43.55 86.80 21 3 LEU A 34 ? ? -140.53 -152.82 22 3 MET A 35 ? ? 69.49 -153.39 23 3 ASN A 37 ? ? -153.24 -50.68 24 3 LYS A 38 ? ? 64.08 -24.16 25 3 SER A 39 ? ? -76.53 -74.96 26 3 GLN A 42 ? ? -62.98 4.33 27 3 ARG A 44 ? ? -142.72 14.98 28 3 SER A 80 ? ? -144.18 53.34 29 4 VAL A 32 ? ? -170.12 137.78 30 4 ASN A 37 ? ? -160.45 106.02 31 4 LYS A 38 ? ? -67.37 1.60 32 4 SER A 40 ? ? -131.13 -40.36 33 4 SER A 43 ? ? 67.05 -152.81 34 4 ARG A 44 ? ? 75.37 -3.14 35 4 SER A 80 ? ? -146.90 -159.19 36 4 LYS A 83 ? ? 54.32 155.15 37 5 ALA A 29 ? ? 45.22 92.21 38 5 MET A 35 ? ? -46.18 77.17 39 5 ARG A 36 ? ? -131.18 -67.04 40 5 GLN A 42 ? ? -69.58 14.45 41 5 ARG A 44 ? ? -151.53 13.34 42 5 LYS A 83 ? ? 60.99 163.35 43 6 ARG A 36 ? ? 173.87 -56.79 44 6 LYS A 38 ? ? 44.39 -66.82 45 6 GLN A 42 ? ? -64.69 14.28 46 6 LEU A 71 ? ? 56.18 17.18 47 6 ASP A 81 ? ? -49.87 154.73 48 6 LYS A 83 ? ? 55.77 165.79 49 6 ASN A 87 ? ? -56.49 -162.02 50 7 MET A 35 ? ? -55.25 16.96 51 7 SER A 40 ? ? -163.30 -25.26 52 7 ARG A 44 ? ? -148.46 -5.09 53 7 LYS A 83 ? ? 54.13 165.84 54 8 ALA A 29 ? ? 47.07 119.38 55 8 LEU A 34 ? ? -64.43 -153.63 56 8 MET A 35 ? ? -94.49 -70.51 57 8 SER A 43 ? ? 77.64 97.01 58 8 HIS A 66 ? ? 53.53 15.78 59 9 MET A 8 ? ? 74.72 53.38 60 9 ALA A 29 ? ? 61.56 122.44 61 9 MET A 35 ? ? -59.40 14.58 62 9 ASN A 37 ? ? -162.58 -47.01 63 9 LYS A 38 ? ? 51.08 7.35 64 9 SER A 43 ? ? 174.76 141.25 65 9 ARG A 44 ? ? 173.86 0.37 66 9 LEU A 54 ? ? 65.23 -32.49 67 9 HIS A 66 ? ? 57.24 16.00 68 9 ASN A 87 ? ? -58.24 -176.25 69 10 ALA A 29 ? ? 44.60 94.44 70 10 ARG A 44 ? ? -130.66 -71.36 71 10 LEU A 54 ? ? -58.78 -9.41 72 10 LYS A 83 ? ? 59.11 166.17 73 11 ASN A 2 ? ? -144.90 26.72 74 11 ALA A 29 ? ? 63.53 110.79 75 11 LEU A 34 ? ? -129.71 -154.48 76 11 MET A 35 ? ? -68.94 69.25 77 11 ARG A 36 ? ? -143.63 -35.12 78 11 LYS A 38 ? ? 47.06 -7.74 79 11 ARG A 44 ? ? -153.52 9.69 80 11 LYS A 83 ? ? 54.27 163.91 81 12 LEU A 34 ? ? -111.50 -153.09 82 12 MET A 35 ? ? 55.13 -176.49 83 12 ASN A 37 ? ? -161.12 98.03 84 12 SER A 43 ? ? 75.33 88.45 85 12 ASN A 87 ? ? -64.68 -154.38 86 13 ALA A 29 ? ? 55.46 99.75 87 13 LEU A 34 ? ? -71.70 -154.17 88 13 ARG A 36 ? ? 68.84 -5.04 89 13 LYS A 38 ? ? 47.29 -15.79 90 13 SER A 40 ? ? -146.92 -7.45 91 13 GLN A 42 ? ? -60.27 -173.30 92 13 SER A 43 ? ? 77.03 137.31 93 13 ARG A 44 ? ? -167.98 15.98 94 13 LYS A 83 ? ? 54.79 164.47 95 14 MET A 8 ? ? 75.67 38.70 96 14 ALA A 29 ? ? 43.49 94.60 97 14 ASN A 37 ? ? -166.45 87.12 98 14 SER A 40 ? ? -152.64 -14.19 99 14 SER A 43 ? ? 178.49 145.15 100 14 ARG A 44 ? ? 174.88 -42.50 101 14 HIS A 66 ? ? 58.68 13.17 102 14 TYR A 79 ? ? -66.21 92.11 103 15 ASN A 2 ? ? -151.53 12.85 104 15 ALA A 29 ? ? 43.54 74.83 105 15 ARG A 36 ? ? 66.02 135.78 106 15 ASN A 37 ? ? -165.97 -42.76 107 15 LYS A 38 ? ? 55.42 -20.36 108 15 ARG A 44 ? ? 174.73 -35.01 109 15 SER A 80 ? ? -67.59 77.59 110 15 LYS A 83 ? ? 54.43 165.95 111 16 MET A 8 ? ? 75.34 45.45 112 16 ARG A 33 ? ? -156.40 83.71 113 16 LEU A 34 ? ? -131.71 -153.39 114 16 MET A 35 ? ? 57.05 -86.50 115 16 ARG A 36 ? ? 172.90 155.62 116 16 ASN A 37 ? ? -164.84 -2.20 117 16 LYS A 38 ? ? 45.18 -13.39 118 16 GLN A 42 ? ? -65.63 8.15 119 16 LEU A 71 ? ? 57.50 14.61 120 16 SER A 80 ? ? -101.26 50.27 121 16 LYS A 85 ? ? -106.97 44.30 122 17 PRO A 10 ? ? -68.04 -178.81 123 17 ALA A 29 ? ? 45.15 104.13 124 17 MET A 35 ? ? -169.11 -87.05 125 17 ARG A 36 ? ? -153.92 -55.58 126 17 ASN A 37 ? ? 59.71 -33.08 127 17 LYS A 38 ? ? 46.22 -70.40 128 17 GLN A 42 ? ? -78.73 29.80 129 17 SER A 43 ? ? -163.76 9.71 130 17 SER A 80 ? ? -90.96 51.63 131 17 LYS A 83 ? ? 54.56 155.77 132 17 PRO A 84 ? ? -59.49 -162.16 133 18 ASN A 2 ? ? -171.07 -22.82 134 18 MET A 8 ? ? 72.31 59.52 135 18 MET A 35 ? ? -49.26 178.68 136 18 ARG A 36 ? ? 77.18 -12.67 137 18 LYS A 38 ? ? 65.11 -48.26 138 18 GLN A 42 ? ? -59.04 -162.76 139 18 SER A 43 ? ? 75.95 50.16 140 18 SER A 80 ? ? -153.82 46.33 141 18 LYS A 83 ? ? 56.91 165.56 142 18 PRO A 84 ? ? -67.31 98.89 143 18 TRP A 90 ? ? -142.77 10.32 144 19 ASN A 2 ? ? 72.96 -1.46 145 19 ALA A 29 ? ? 44.21 90.97 146 19 MET A 35 ? ? -58.58 13.16 147 19 ASN A 37 ? ? -177.11 118.56 148 19 SER A 40 ? ? -130.65 -38.68 149 19 GLN A 42 ? ? -44.61 105.76 150 19 ARG A 44 ? ? 174.34 2.54 151 19 LEU A 54 ? ? 63.01 -27.73 152 19 LEU A 71 ? ? 68.21 -13.80 153 19 SER A 80 ? ? -97.01 46.84 154 19 LYS A 83 ? ? 54.24 165.51 # loop_ _pdbx_validate_peptide_omega.id _pdbx_validate_peptide_omega.PDB_model_num _pdbx_validate_peptide_omega.auth_comp_id_1 _pdbx_validate_peptide_omega.auth_asym_id_1 _pdbx_validate_peptide_omega.auth_seq_id_1 _pdbx_validate_peptide_omega.PDB_ins_code_1 _pdbx_validate_peptide_omega.label_alt_id_1 _pdbx_validate_peptide_omega.auth_comp_id_2 _pdbx_validate_peptide_omega.auth_asym_id_2 _pdbx_validate_peptide_omega.auth_seq_id_2 _pdbx_validate_peptide_omega.PDB_ins_code_2 _pdbx_validate_peptide_omega.label_alt_id_2 _pdbx_validate_peptide_omega.omega 1 1 ASN A 37 ? ? LYS A 38 ? ? -144.83 2 2 GLN A 28 ? ? ALA A 29 ? ? -142.80 3 5 VAL A 27 ? ? GLN A 28 ? ? -149.13 4 8 GLN A 28 ? ? ALA A 29 ? ? -146.03 5 9 GLN A 28 ? ? ALA A 29 ? ? -143.21 6 12 GLN A 28 ? ? ALA A 29 ? ? 149.71 7 15 ALA A 47 ? ? PHE A 48 ? ? 145.19 8 17 GLN A 28 ? ? ALA A 29 ? ? -148.31 9 17 ASN A 37 ? ? LYS A 38 ? ? -141.09 10 19 ASP A 81 ? ? PRO A 82 ? ? -149.17 # loop_ _pdbx_validate_planes.id _pdbx_validate_planes.PDB_model_num _pdbx_validate_planes.auth_comp_id _pdbx_validate_planes.auth_asym_id _pdbx_validate_planes.auth_seq_id _pdbx_validate_planes.PDB_ins_code _pdbx_validate_planes.label_alt_id _pdbx_validate_planes.rmsd _pdbx_validate_planes.type 1 1 ARG A 30 ? ? 0.093 'SIDE CHAIN' 2 3 ARG A 36 ? ? 0.084 'SIDE CHAIN' 3 6 ARG A 30 ? ? 0.134 'SIDE CHAIN' 4 7 ARG A 30 ? ? 0.095 'SIDE CHAIN' 5 9 ARG A 19 ? ? 0.138 'SIDE CHAIN' 6 9 TYR A 79 ? ? 0.101 'SIDE CHAIN' 7 10 ARG A 30 ? ? 0.082 'SIDE CHAIN' 8 15 TYR A 79 ? ? 0.124 'SIDE CHAIN' 9 16 ARG A 44 ? ? 0.113 'SIDE CHAIN' #