HEADER CELL CYCLE 14-DEC-12 2M26 TITLE NMR STRUCTURE OF THE C-TERMINAL DOMAIN OF THE PROTEIN HCFC1 FROM MUS TITLE 2 MUSCULUS COMPND MOL_ID: 1; COMPND 2 MOLECULE: HCF C-TERMINAL CHAIN 1; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 1896-2020; COMPND 5 SYNONYM: HOST CELL FACTOR 1, HCF, HCF-1, C1 FACTOR; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 3 ORGANISM_COMMON: MOUSE; SOURCE 4 ORGANISM_TAXID: 10090; SOURCE 5 GENE: HCFC1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21; SOURCE 9 EXPRESSION_SYSTEM_VECTOR: PSPEEDET KEYWDS JCSG, PSI-BIOLOGY, CELL CYCLE, STRUCTURAL GENOMICS, JOINT CENTER FOR KEYWDS 2 STRUCTURAL GENOMICS, PARTNERSHIP FOR STEM CELL BIOLOGY, STEMCELL EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR P.SERRANO,M.GERALT,S.K.DUTTA,K.WUTHRICH,JOINT CENTER FOR STRUCTURAL AUTHOR 2 GENOMICS (JCSG),PARTNERSHIP FOR STEM CELL BIOLOGY (STEMCELL) REVDAT 3 14-JUN-23 2M26 1 REMARK REVDAT 2 01-FEB-23 2M26 1 REMARK SEQADV REVDAT 1 16-JAN-13 2M26 0 JRNL AUTH P.SERRANO,K.WUTHRICH JRNL TITL NMR STRUCTURE OF THE C-TERMINAL DOMAIN OF THE PROTEIN HCFC1 JRNL TITL 2 FROM MUS MUSCULUS JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CYANA, OPALP REMARK 3 AUTHORS : GUNTERT P. (CYANA), LUGINBUHL, GUNTERT, BILLETER REMARK 3 AND WUTHRICH (OPALP) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2M26 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 17-DEC-12. REMARK 100 THE DEPOSITION ID IS D_1000103114. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 6.5 REMARK 210 IONIC STRENGTH : 0.220 REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 1.2 MM [U-98% 13C; U-98% 15N] REMARK 210 PROTEIN, 50 MM SODIUM CHLORIDE, REMARK 210 20 MM SODIUM PHOSPHATE, 5 MM REMARK 210 SODIUM AZIDE, 95% H2O/5% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D 1H-15N HSQC; 3D 1H-13C NOESY REMARK 210 ALIPHATIC; 3D 1H-13C NOESY REMARK 210 AROMATIC; 3D 1H-15N NOESY; 4D REMARK 210 APSY HACANH; 5D APSY CBCACONH; REMARK 210 5D APSY HACACONH REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ; 800 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : UNIO REMARK 210 METHOD USED : MOLECULAR DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 80 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : TARGET FUNCTION REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 1 VAL A 41 CA - CB - CG1 ANGL. DEV. = 18.9 DEGREES REMARK 500 1 TYR A 68 CB - CG - CD2 ANGL. DEV. = -4.3 DEGREES REMARK 500 9 VAL A 67 CG1 - CB - CG2 ANGL. DEV. = 11.2 DEGREES REMARK 500 10 ARG A 102 NE - CZ - NH2 ANGL. DEV. = -3.2 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 PRO A 7 6.15 -66.18 REMARK 500 1 ALA A 12 27.32 45.91 REMARK 500 1 VAL A 31 -66.34 -141.48 REMARK 500 1 LYS A 35 73.81 -102.40 REMARK 500 1 ILE A 37 -23.20 -141.81 REMARK 500 1 LYS A 55 -3.43 70.99 REMARK 500 1 SER A 56 86.35 52.19 REMARK 500 1 THR A 58 68.90 -166.96 REMARK 500 1 ALA A 60 115.48 177.79 REMARK 500 1 GLN A 61 105.61 -47.04 REMARK 500 1 ARG A 66 78.13 53.63 REMARK 500 1 CYS A 69 51.03 -159.43 REMARK 500 1 THR A 91 -62.03 -135.78 REMARK 500 1 LYS A 121 -62.34 69.43 REMARK 500 1 ASP A 122 83.28 50.93 REMARK 500 2 CYS A 2 71.33 50.73 REMARK 500 2 LEU A 3 61.34 -119.98 REMARK 500 2 ALA A 12 25.69 45.61 REMARK 500 2 ALA A 50 -179.43 68.32 REMARK 500 2 SER A 51 135.08 -176.49 REMARK 500 2 LYS A 55 -8.10 -56.75 REMARK 500 2 SER A 56 -9.22 -58.41 REMARK 500 2 ALA A 60 83.21 -166.29 REMARK 500 2 ARG A 66 75.36 43.97 REMARK 500 2 SER A 74 11.80 -157.13 REMARK 500 2 THR A 91 -66.25 -159.06 REMARK 500 2 SER A 120 -49.87 -143.65 REMARK 500 3 ALA A 9 165.12 174.49 REMARK 500 3 ASP A 20 26.31 -79.33 REMARK 500 3 VAL A 31 -62.31 -144.48 REMARK 500 3 SER A 33 10.35 -62.70 REMARK 500 3 GLN A 46 43.40 -106.96 REMARK 500 3 SER A 57 -43.13 -173.41 REMARK 500 3 ALA A 60 104.52 -161.64 REMARK 500 3 CYS A 69 71.92 -118.30 REMARK 500 3 SER A 72 73.24 -151.29 REMARK 500 3 SER A 74 76.60 43.83 REMARK 500 3 CYS A 75 83.16 77.52 REMARK 500 3 THR A 90 -84.35 -117.66 REMARK 500 3 PRO A 93 97.38 -68.44 REMARK 500 3 SER A 124 -154.72 65.61 REMARK 500 4 PRO A 7 6.92 -69.39 REMARK 500 4 ALA A 9 164.79 75.27 REMARK 500 4 GLN A 46 13.92 -69.74 REMARK 500 4 ALA A 60 115.22 73.72 REMARK 500 4 CYS A 69 40.70 -157.18 REMARK 500 4 THR A 91 -69.31 -142.86 REMARK 500 4 TYR A 107 12.03 -67.51 REMARK 500 4 SER A 124 -67.81 -126.58 REMARK 500 5 CYS A 2 89.37 56.50 REMARK 500 REMARK 500 THIS ENTRY HAS 305 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 GLN A 46 SER A 47 1 149.71 REMARK 500 ALA A 9 PRO A 10 2 149.37 REMARK 500 CYS A 75 LEU A 76 3 145.67 REMARK 500 GLY A 1 CYS A 2 11 -121.68 REMARK 500 HIS A 86 ILE A 87 12 -149.26 REMARK 500 CYS A 75 LEU A 76 17 149.90 REMARK 500 SER A 48 GLN A 49 19 -147.13 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 2 ARG A 66 0.08 SIDE CHAIN REMARK 500 4 TYR A 89 0.07 SIDE CHAIN REMARK 500 8 ARG A 102 0.11 SIDE CHAIN REMARK 500 9 ARG A 114 0.11 SIDE CHAIN REMARK 500 11 TYR A 68 0.07 SIDE CHAIN REMARK 500 12 ARG A 114 0.09 SIDE CHAIN REMARK 500 13 ARG A 98 0.11 SIDE CHAIN REMARK 500 13 ARG A 102 0.14 SIDE CHAIN REMARK 500 15 ARG A 114 0.11 SIDE CHAIN REMARK 500 16 TYR A 68 0.09 SIDE CHAIN REMARK 500 20 TYR A 89 0.11 SIDE CHAIN REMARK 500 20 TYR A 107 0.08 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 18901 RELATED DB: BMRB REMARK 900 RELATED ID: JCSG-421314 RELATED DB: TARGETTRACK DBREF 2M26 A 2 126 UNP Q61191 HCFC1_MOUSE 1896 2020 SEQADV 2M26 GLY A 1 UNP Q61191 EXPRESSION TAG SEQRES 1 A 126 GLY CYS LEU PRO GLY PHE PRO GLY ALA PRO CYS ALA ILE SEQRES 2 A 126 LYS ILE SER LYS SER PRO ASP GLY ALA HIS LEU THR TRP SEQRES 3 A 126 GLU PRO PRO SER VAL THR SER GLY LYS ILE ILE GLU TYR SEQRES 4 A 126 SER VAL TYR LEU ALA ILE GLN SER SER GLN ALA SER GLY SEQRES 5 A 126 GLU PRO LYS SER SER THR PRO ALA GLN LEU ALA PHE MET SEQRES 6 A 126 ARG VAL TYR CYS GLY PRO SER PRO SER CYS LEU VAL GLN SEQRES 7 A 126 SER SER SER LEU SER ASN ALA HIS ILE ASP TYR THR THR SEQRES 8 A 126 LYS PRO ALA ILE ILE PHE ARG ILE ALA ALA ARG ASN GLU SEQRES 9 A 126 LYS GLY TYR GLY PRO ALA THR GLN VAL ARG TRP LEU GLN SEQRES 10 A 126 GLU THR SER LYS ASP SER SER GLY THR HELIX 1 1 GLN A 78 ASN A 84 1 7 SHEET 1 A 2 CYS A 11 SER A 18 0 SHEET 2 A 2 GLY A 21 GLU A 27 -1 O GLU A 27 N CYS A 11 SHEET 1 B 3 ILE A 36 LEU A 43 0 SHEET 2 B 3 ALA A 94 ASN A 103 -1 O ARG A 102 N ILE A 37 SHEET 3 B 3 THR A 111 LEU A 116 -1 O TRP A 115 N ILE A 95 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1