data_2MDV # _entry.id 2MDV # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.279 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 2MDV RCSB RCSB103517 BMRB 19504 WWPDB D_1000103517 # loop_ _pdbx_database_related.content_type _pdbx_database_related.db_id _pdbx_database_related.db_name _pdbx_database_related.details unspecified 2mdw PDB . unspecified 19504 BMRB . # _pdbx_database_status.deposit_site BMRB _pdbx_database_status.entry_id 2MDV _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2013-09-18 _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code REL _pdbx_database_status.status_code_mr REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_cs REL _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Kier, B.L.' 1 'Sheffler, W.' 2 'Baker, D.' 3 # _citation.id primary _citation.title 'Covalent Assembly of Homooligomeric Proteins Using Structure-templating Hubs' _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Kier, B.L.' 1 primary 'Sheffler, W.' 2 primary 'Baker, D.' 3 # _entity.id 1 _entity.type polymer _entity.src_method syn _entity.pdbx_description 'Designed protein' _entity.formula_weight 4599.339 _entity.pdbx_number_of_molecules 2 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.details ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code RWLCIWLSDQTLEDLEKMARREGLSKSEMINVALQHYK _entity_poly.pdbx_seq_one_letter_code_can RWLCIWLSDQTLEDLEKMARREGLSKSEMINVALQHYK _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ARG n 1 2 TRP n 1 3 LEU n 1 4 CYS n 1 5 ILE n 1 6 TRP n 1 7 LEU n 1 8 SER n 1 9 ASP n 1 10 GLN n 1 11 THR n 1 12 LEU n 1 13 GLU n 1 14 ASP n 1 15 LEU n 1 16 GLU n 1 17 LYS n 1 18 MET n 1 19 ALA n 1 20 ARG n 1 21 ARG n 1 22 GLU n 1 23 GLY n 1 24 LEU n 1 25 SER n 1 26 LYS n 1 27 SER n 1 28 GLU n 1 29 MET n 1 30 ILE n 1 31 ASN n 1 32 VAL n 1 33 ALA n 1 34 LEU n 1 35 GLN n 1 36 HIS n 1 37 TYR n 1 38 LYS n # _pdbx_entity_src_syn.entity_id 1 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num ? _pdbx_entity_src_syn.pdbx_end_seq_num ? _pdbx_entity_src_syn.organism_scientific 'artificial gene' _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id 32630 _pdbx_entity_src_syn.details ? # _struct_ref.id 1 _struct_ref.db_name PDB _struct_ref.db_code 2MDV _struct_ref.pdbx_db_accession 2MDV _struct_ref.entity_id 1 _struct_ref.pdbx_align_begin ? _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 2MDV A 1 ? 38 ? 2MDV 1 ? 38 ? 1 38 2 1 2MDV B 1 ? 38 ? 2MDV 1 ? 38 ? 1 38 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.solution_id _pdbx_nmr_exptl.type 1 1 1 '2D 1H-1H NOESY' 1 2 1 '2D 1H-1H TOCSY' # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.ionic_strength 0.11 _pdbx_nmr_exptl_sample_conditions.pH 5 _pdbx_nmr_exptl_sample_conditions.pressure ambient _pdbx_nmr_exptl_sample_conditions.pressure_units ? _pdbx_nmr_exptl_sample_conditions.temperature 280 _pdbx_nmr_exptl_sample_conditions.temperature_units K # _pdbx_nmr_sample_details.contents '50 mM sodium phosphate, 0.5 mM DSS, 90% H2O/10% D2O' _pdbx_nmr_sample_details.solution_id 1 _pdbx_nmr_sample_details.solvent_system '90% H2O/10% D2O' # _pdbx_nmr_spectrometer.field_strength 700 _pdbx_nmr_spectrometer.manufacturer Bruker _pdbx_nmr_spectrometer.model Avance _pdbx_nmr_spectrometer.spectrometer_id 1 _pdbx_nmr_spectrometer.type 'Bruker Avance' # _pdbx_nmr_refine.entry_id 2MDV _pdbx_nmr_refine.method 'simulated annealing' _pdbx_nmr_refine.details ? _pdbx_nmr_refine.software_ordinal 1 # _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.conformer_selection_criteria 'structures with the lowest energy' _pdbx_nmr_ensemble.conformers_calculated_total_number 40 _pdbx_nmr_ensemble.conformers_submitted_total_number 32 _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.entry_id 2MDV _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.entry_id 2MDV _pdbx_nmr_representative.selection_criteria 'lowest energy' # loop_ _pdbx_nmr_software.authors _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.ordinal 'Baker et al' design Foldit ? 1 'Brunger, Adams, Clore, Gros, Nilges and Read' 'structure solution' CNS 1.2 2 'Brunger, Adams, Clore, Gros, Nilges and Read' refinement CNS 1.2 3 Goddard 'chemical shift assignment' SPARKY ? 4 Goddard 'data analysis' SPARKY ? 5 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.crystals_number ? _exptl.details ;A beta-alpha-alpha dimer motif held together by a WXCXW hub, and employing the key features of the RHH1 superfamily. Designed & optimized using Foldit. ; _exptl.entry_id 2MDV _exptl.method 'SOLUTION NMR' _exptl.method_details ? # _struct.entry_id 2MDV _struct.title 'NMR structure of beta alpha alpha 38' _struct.pdbx_descriptor 'Designed protein' _struct.pdbx_model_details 'lowest energy, model1' _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2MDV _struct_keywords.pdbx_keywords 'DE NOVO PROTEIN' _struct_keywords.text 'Hub-linked, RHH1 Superfamily, Miniprotein, DE NOVO PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? # _struct_biol.id 1 _struct_biol.details 'Dimerization is covalent, via a WXCXW hub.)' # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 SER A 8 ? GLU A 13 ? SER A 8 GLU A 13 1 ? 6 HELX_P HELX_P2 2 GLU A 13 ? GLY A 23 ? GLU A 13 GLY A 23 1 ? 11 HELX_P HELX_P3 3 SER A 25 ? HIS A 36 ? SER A 25 HIS A 36 1 ? 12 HELX_P HELX_P4 4 GLU B 13 ? LYS B 17 ? GLU B 13 LYS B 17 5 ? 5 HELX_P HELX_P5 5 SER B 25 ? HIS B 36 ? SER B 25 HIS B 36 1 ? 12 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_conn.id disulf1 _struct_conn.conn_type_id disulf _struct_conn.pdbx_leaving_atom_flag ? _struct_conn.pdbx_PDB_id ? _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 4 _struct_conn.ptnr1_label_atom_id SG _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id B _struct_conn.ptnr2_label_comp_id CYS _struct_conn.ptnr2_label_seq_id 4 _struct_conn.ptnr2_label_atom_id SG _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 4 _struct_conn.ptnr2_auth_asym_id B _struct_conn.ptnr2_auth_comp_id CYS _struct_conn.ptnr2_auth_seq_id 4 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.details ? _struct_conn.pdbx_dist_value 2.591 _struct_conn.pdbx_value_order ? # _struct_conn_type.id disulf _struct_conn_type.criteria ? _struct_conn_type.reference ? # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 2 _struct_sheet.details ? # _struct_sheet_order.sheet_id A _struct_sheet_order.range_id_1 1 _struct_sheet_order.range_id_2 2 _struct_sheet_order.offset ? _struct_sheet_order.sense anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 TRP A 2 ? TRP A 6 ? TRP A 2 TRP A 6 A 2 TRP B 2 ? TRP B 6 ? TRP B 2 TRP B 6 # _pdbx_struct_sheet_hbond.sheet_id A _pdbx_struct_sheet_hbond.range_id_1 1 _pdbx_struct_sheet_hbond.range_id_2 2 _pdbx_struct_sheet_hbond.range_1_label_atom_id N _pdbx_struct_sheet_hbond.range_1_label_comp_id LEU _pdbx_struct_sheet_hbond.range_1_label_asym_id A _pdbx_struct_sheet_hbond.range_1_label_seq_id 3 _pdbx_struct_sheet_hbond.range_1_PDB_ins_code ? _pdbx_struct_sheet_hbond.range_1_auth_atom_id N _pdbx_struct_sheet_hbond.range_1_auth_comp_id LEU _pdbx_struct_sheet_hbond.range_1_auth_asym_id A _pdbx_struct_sheet_hbond.range_1_auth_seq_id 3 _pdbx_struct_sheet_hbond.range_2_label_atom_id O _pdbx_struct_sheet_hbond.range_2_label_comp_id ILE _pdbx_struct_sheet_hbond.range_2_label_asym_id B _pdbx_struct_sheet_hbond.range_2_label_seq_id 5 _pdbx_struct_sheet_hbond.range_2_PDB_ins_code ? _pdbx_struct_sheet_hbond.range_2_auth_atom_id O _pdbx_struct_sheet_hbond.range_2_auth_comp_id ILE _pdbx_struct_sheet_hbond.range_2_auth_asym_id B _pdbx_struct_sheet_hbond.range_2_auth_seq_id 5 # _atom_sites.entry_id 2MDV _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ARG 1 1 1 ARG ARG A . n A 1 2 TRP 2 2 2 TRP TRP A . n A 1 3 LEU 3 3 3 LEU LEU A . n A 1 4 CYS 4 4 4 CYS CYS A . n A 1 5 ILE 5 5 5 ILE ILE A . n A 1 6 TRP 6 6 6 TRP TRP A . n A 1 7 LEU 7 7 7 LEU LEU A . n A 1 8 SER 8 8 8 SER SER A . n A 1 9 ASP 9 9 9 ASP ASP A . n A 1 10 GLN 10 10 10 GLN GLN A . n A 1 11 THR 11 11 11 THR THR A . n A 1 12 LEU 12 12 12 LEU LEU A . n A 1 13 GLU 13 13 13 GLU GLU A . n A 1 14 ASP 14 14 14 ASP ASP A . n A 1 15 LEU 15 15 15 LEU LEU A . n A 1 16 GLU 16 16 16 GLU GLU A . n A 1 17 LYS 17 17 17 LYS LYS A . n A 1 18 MET 18 18 18 MET MET A . n A 1 19 ALA 19 19 19 ALA ALA A . n A 1 20 ARG 20 20 20 ARG ARG A . n A 1 21 ARG 21 21 21 ARG ARG A . n A 1 22 GLU 22 22 22 GLU GLU A . n A 1 23 GLY 23 23 23 GLY GLY A . n A 1 24 LEU 24 24 24 LEU LEU A . n A 1 25 SER 25 25 25 SER SER A . n A 1 26 LYS 26 26 26 LYS LYS A . n A 1 27 SER 27 27 27 SER SER A . n A 1 28 GLU 28 28 28 GLU GLU A . n A 1 29 MET 29 29 29 MET MET A . n A 1 30 ILE 30 30 30 ILE ILE A . n A 1 31 ASN 31 31 31 ASN ASN A . n A 1 32 VAL 32 32 32 VAL VAL A . n A 1 33 ALA 33 33 33 ALA ALA A . n A 1 34 LEU 34 34 34 LEU LEU A . n A 1 35 GLN 35 35 35 GLN GLN A . n A 1 36 HIS 36 36 36 HIS HIS A . n A 1 37 TYR 37 37 37 TYR TYR A . n A 1 38 LYS 38 38 38 LYS LYS A . n B 1 1 ARG 1 1 1 ARG ARG B . n B 1 2 TRP 2 2 2 TRP TRP B . n B 1 3 LEU 3 3 3 LEU LEU B . n B 1 4 CYS 4 4 4 CYS CYS B . n B 1 5 ILE 5 5 5 ILE ILE B . n B 1 6 TRP 6 6 6 TRP TRP B . n B 1 7 LEU 7 7 7 LEU LEU B . n B 1 8 SER 8 8 8 SER SER B . n B 1 9 ASP 9 9 9 ASP ASP B . n B 1 10 GLN 10 10 10 GLN GLN B . n B 1 11 THR 11 11 11 THR THR B . n B 1 12 LEU 12 12 12 LEU LEU B . n B 1 13 GLU 13 13 13 GLU GLU B . n B 1 14 ASP 14 14 14 ASP ASP B . n B 1 15 LEU 15 15 15 LEU LEU B . n B 1 16 GLU 16 16 16 GLU GLU B . n B 1 17 LYS 17 17 17 LYS LYS B . n B 1 18 MET 18 18 18 MET MET B . n B 1 19 ALA 19 19 19 ALA ALA B . n B 1 20 ARG 20 20 20 ARG ARG B . n B 1 21 ARG 21 21 21 ARG ARG B . n B 1 22 GLU 22 22 22 GLU GLU B . n B 1 23 GLY 23 23 23 GLY GLY B . n B 1 24 LEU 24 24 24 LEU LEU B . n B 1 25 SER 25 25 25 SER SER B . n B 1 26 LYS 26 26 26 LYS LYS B . n B 1 27 SER 27 27 27 SER SER B . n B 1 28 GLU 28 28 28 GLU GLU B . n B 1 29 MET 29 29 29 MET MET B . n B 1 30 ILE 30 30 30 ILE ILE B . n B 1 31 ASN 31 31 31 ASN ASN B . n B 1 32 VAL 32 32 32 VAL VAL B . n B 1 33 ALA 33 33 33 ALA ALA B . n B 1 34 LEU 34 34 34 LEU LEU B . n B 1 35 GLN 35 35 35 GLN GLN B . n B 1 36 HIS 36 36 36 HIS HIS B . n B 1 37 TYR 37 37 37 TYR TYR B . n B 1 38 LYS 38 38 38 LYS LYS B . n # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 1467.8 ? 1 MORE -30.1 ? 1 'SSA (A^2)' 4033 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _pdbx_audit_revision_history.ordinal 1 _pdbx_audit_revision_history.data_content_type 'Structure model' _pdbx_audit_revision_history.major_revision 1 _pdbx_audit_revision_history.minor_revision 0 _pdbx_audit_revision_history.revision_date 2014-10-01 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_nmr_exptl_sample.component _pdbx_nmr_exptl_sample.concentration _pdbx_nmr_exptl_sample.concentration_range _pdbx_nmr_exptl_sample.concentration_units _pdbx_nmr_exptl_sample.isotopic_labeling _pdbx_nmr_exptl_sample.solution_id 'sodium phosphate-1' 50 ? mM ? 1 DSS-2 0.5 ? mM ? 1 # _pdbx_nmr_constraints.disulfide_bond_constraints_total_count 2 _pdbx_nmr_constraints.entry_id 2MDV _pdbx_nmr_constraints.hydrogen_bond_constraints_total_count ? _pdbx_nmr_constraints.NA_alpha-angle_constraints_total_count ? _pdbx_nmr_constraints.NA_beta-angle_constraints_total_count ? _pdbx_nmr_constraints.NA_chi-angle_constraints_total_count ? _pdbx_nmr_constraints.NA_delta-angle_constraints_total_count ? _pdbx_nmr_constraints.NA_epsilon-angle_constraints_total_count ? _pdbx_nmr_constraints.NA_gamma-angle_constraints_total_count ? _pdbx_nmr_constraints.NA_other-angle_constraints_total_count ? _pdbx_nmr_constraints.NA_sugar_pucker_constraints_total_count ? _pdbx_nmr_constraints.NOE_constraints_total 1136 _pdbx_nmr_constraints.NOE_interentity_total_count ? _pdbx_nmr_constraints.NOE_interproton_distance_evaluation ? _pdbx_nmr_constraints.NOE_intraresidue_total_count 654 _pdbx_nmr_constraints.NOE_long_range_total_count 44 _pdbx_nmr_constraints.NOE_medium_range_total_count 144 _pdbx_nmr_constraints.NOE_motional_averaging_correction ? _pdbx_nmr_constraints.NOE_pseudoatom_corrections ? _pdbx_nmr_constraints.NOE_sequential_total_count 284 _pdbx_nmr_constraints.protein_chi_angle_constraints_total_count ? _pdbx_nmr_constraints.protein_other_angle_constraints_total_count ? _pdbx_nmr_constraints.protein_phi_angle_constraints_total_count ? _pdbx_nmr_constraints.protein_psi_angle_constraints_total_count ? # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 5 O B VAL 32 ? ? H B HIS 36 ? ? 1.58 2 13 O A SER 25 ? ? H A MET 29 ? ? 1.54 3 22 O A SER 25 ? ? H A MET 29 ? ? 1.59 4 27 O A VAL 32 ? ? H A HIS 36 ? ? 1.59 5 27 O B SER 27 ? ? H B ASN 31 ? ? 1.59 6 30 O B VAL 32 ? ? H B HIS 36 ? ? 1.53 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASP B 9 ? ? -61.53 -168.60 2 1 GLN B 10 ? ? 37.65 41.59 3 1 THR B 11 ? ? 177.32 -51.53 4 1 LEU B 15 ? ? -70.75 25.20 5 1 ALA B 19 ? ? -101.72 -66.42 6 2 ASP A 9 ? ? -60.55 -160.48 7 2 GLN A 10 ? ? 36.87 43.27 8 2 THR A 11 ? ? 177.44 -50.28 9 2 LEU A 15 ? ? -69.04 25.75 10 2 ALA A 19 ? ? -101.13 -64.77 11 2 LEU B 15 ? ? -77.01 29.41 12 2 GLU B 16 ? ? -99.50 -61.18 13 2 ALA B 19 ? ? -97.91 -67.50 14 3 LEU A 15 ? ? -79.41 24.87 15 3 LEU B 15 ? ? -77.95 28.96 16 3 GLU B 16 ? ? -104.16 -61.54 17 3 ALA B 19 ? ? -104.16 -64.38 18 4 LEU A 7 ? ? -115.54 76.14 19 4 SER A 8 ? ? -76.10 -145.04 20 4 ASP A 9 ? ? -66.13 -155.28 21 4 GLN A 10 ? ? 34.53 44.43 22 4 THR A 11 ? ? -178.50 -50.34 23 4 LEU A 15 ? ? -77.38 31.80 24 4 MET A 18 ? ? -102.08 -76.68 25 4 ALA A 19 ? ? -26.39 -32.87 26 4 ARG A 20 ? ? -66.92 -122.72 27 4 LEU A 24 ? ? 53.34 -161.52 28 4 SER B 8 ? ? -81.87 -150.46 29 4 GLN B 10 ? ? 35.77 39.14 30 4 THR B 11 ? ? -176.57 -52.36 31 4 ARG B 20 ? ? -67.70 -73.73 32 4 LEU B 24 ? ? 177.86 -176.74 33 5 SER A 8 ? ? -66.30 -142.71 34 5 ASP A 9 ? ? -97.46 -147.40 35 5 GLN A 10 ? ? 32.42 45.75 36 5 THR A 11 ? ? -172.53 -51.37 37 5 LEU A 15 ? ? -65.24 9.00 38 5 MET A 18 ? ? -97.75 -65.85 39 5 ALA A 19 ? ? -33.90 -31.38 40 5 ARG A 20 ? ? -64.99 -108.22 41 5 LEU A 24 ? ? 51.00 -157.71 42 5 GLN B 10 ? ? -73.16 38.75 43 5 THR B 11 ? ? -174.17 -51.54 44 5 LEU B 15 ? ? -79.40 27.07 45 5 ARG B 20 ? ? -65.67 -126.35 46 5 LEU B 24 ? ? 55.56 -166.18 47 6 LEU A 3 ? ? -171.34 147.29 48 6 LEU A 15 ? ? -78.15 24.56 49 6 ARG A 20 ? ? -68.35 -124.55 50 6 LEU A 24 ? ? 50.73 -161.52 51 6 TYR A 37 ? ? -44.32 153.60 52 6 LEU B 15 ? ? -76.96 27.72 53 6 ALA B 19 ? ? -101.32 -66.51 54 7 SER A 8 ? ? -78.77 -139.10 55 7 GLN A 10 ? ? 35.07 45.07 56 7 THR A 11 ? ? -172.65 -52.33 57 7 LEU A 15 ? ? -68.68 7.01 58 7 MET A 18 ? ? -97.91 -66.11 59 7 ALA A 19 ? ? -36.87 -29.44 60 7 ARG A 20 ? ? -64.69 -109.76 61 7 LEU A 24 ? ? 49.91 -157.61 62 8 MET A 18 ? ? -66.28 -70.60 63 8 ALA A 19 ? ? -27.70 -32.10 64 8 ARG A 20 ? ? -66.14 -120.71 65 8 LEU A 24 ? ? 53.46 -159.52 66 8 SER B 8 ? ? -72.66 -135.86 67 8 ASP B 9 ? ? -91.19 -151.70 68 8 GLN B 10 ? ? 33.92 43.62 69 8 THR B 11 ? ? -173.24 -44.72 70 8 LEU B 15 ? ? -71.59 21.04 71 8 ALA B 19 ? ? -99.33 -73.30 72 9 SER A 8 ? ? -76.80 -125.07 73 9 GLN A 10 ? ? -68.43 45.41 74 9 THR A 11 ? ? -170.62 -42.30 75 9 LEU A 15 ? ? -84.86 33.39 76 9 ALA A 19 ? ? -28.87 -31.57 77 9 ARG A 20 ? ? -66.78 -118.23 78 9 LEU A 24 ? ? 53.04 -161.83 79 9 GLN B 10 ? ? -75.68 40.53 80 9 THR B 11 ? ? -173.60 -52.42 81 9 LEU B 15 ? ? -66.74 12.38 82 9 ALA B 19 ? ? -97.35 -67.93 83 9 ARG B 20 ? ? -58.93 -70.28 84 9 LEU B 24 ? ? 179.21 178.99 85 10 MET A 18 ? ? -81.71 -74.75 86 10 SER B 8 ? ? -57.11 170.94 87 10 GLN B 10 ? ? -66.53 9.56 88 10 THR B 11 ? ? -145.72 19.17 89 10 ASP B 14 ? ? -55.77 -6.43 90 10 ALA B 19 ? ? -100.30 -73.52 91 11 SER A 8 ? ? -71.58 -134.94 92 11 GLN A 10 ? ? -73.11 38.97 93 11 THR A 11 ? ? -160.59 -43.17 94 11 LEU A 15 ? ? -79.85 27.20 95 11 MET A 18 ? ? -100.99 -66.05 96 11 ALA A 19 ? ? -29.23 -32.08 97 11 ARG A 20 ? ? -62.54 -139.85 98 11 LEU A 24 ? ? 52.79 -162.36 99 11 SER B 8 ? ? -73.18 -149.15 100 11 ASP B 9 ? ? -96.22 -150.20 101 11 GLN B 10 ? ? 35.55 43.15 102 11 THR B 11 ? ? -172.43 -46.75 103 11 LEU B 15 ? ? -83.81 34.18 104 11 MET B 18 ? ? -89.84 -80.43 105 12 MET A 18 ? ? -68.24 -71.77 106 12 ALA A 19 ? ? -28.08 -32.09 107 12 ARG A 20 ? ? -65.66 -121.92 108 12 LEU A 24 ? ? 52.61 -160.06 109 12 TYR A 37 ? ? -29.06 134.05 110 12 LEU B 15 ? ? -76.29 29.64 111 12 ALA B 19 ? ? -97.73 -65.28 112 12 LEU B 24 ? ? -178.26 -177.34 113 13 SER A 8 ? ? -74.80 -141.04 114 13 ASP A 9 ? ? -79.58 -155.33 115 13 GLN A 10 ? ? 36.82 43.85 116 13 THR A 11 ? ? -174.96 -48.20 117 13 LEU A 15 ? ? -76.64 31.34 118 13 MET A 18 ? ? -88.18 -82.05 119 13 ALA A 19 ? ? -23.87 -35.78 120 13 ARG A 20 ? ? -68.52 -117.97 121 13 LEU A 24 ? ? 52.83 -158.54 122 13 LYS A 26 ? ? -38.79 -39.43 123 13 ASP B 9 ? ? -59.41 -155.77 124 13 GLN B 10 ? ? 37.45 39.84 125 13 THR B 11 ? ? 177.61 -51.56 126 13 LEU B 15 ? ? -70.32 23.58 127 13 MET B 18 ? ? -91.45 -84.49 128 14 SER A 8 ? ? -72.45 -129.95 129 14 ASP A 9 ? ? -97.74 -154.80 130 14 GLN A 10 ? ? 34.95 45.96 131 14 THR A 11 ? ? -174.78 -48.37 132 14 LEU A 15 ? ? -69.20 16.67 133 14 ALA A 19 ? ? -98.04 -64.13 134 14 ARG B 20 ? ? -77.89 -97.90 135 14 LEU B 24 ? ? 44.84 27.96 136 14 SER B 25 ? ? 132.10 142.06 137 15 LEU A 24 ? ? 179.87 -175.88 138 15 SER B 8 ? ? -67.96 -125.78 139 15 GLN B 10 ? ? -72.34 39.69 140 15 THR B 11 ? ? -162.19 -41.36 141 15 MET B 18 ? ? -92.23 -70.19 142 15 ALA B 19 ? ? -28.68 -31.32 143 15 ARG B 20 ? ? -67.19 -121.71 144 15 LEU B 24 ? ? 50.26 -157.33 145 16 SER A 8 ? ? -85.57 -137.00 146 16 ASP A 9 ? ? -76.82 -157.33 147 16 GLN A 10 ? ? 35.05 43.96 148 16 THR A 11 ? ? -172.85 -51.21 149 16 LEU A 15 ? ? -80.80 36.19 150 16 MET A 18 ? ? -103.85 -86.25 151 16 SER B 8 ? ? -79.41 -164.36 152 16 GLN B 10 ? ? -64.06 5.68 153 16 LEU B 15 ? ? -81.35 31.19 154 16 MET B 18 ? ? -83.89 -74.23 155 16 ALA B 19 ? ? -26.61 -33.87 156 16 ARG B 20 ? ? -66.90 -114.13 157 16 LEU B 24 ? ? 52.74 -162.51 158 17 GLN A 10 ? ? -78.25 40.13 159 17 THR A 11 ? ? -174.75 -51.73 160 17 MET A 18 ? ? -83.89 -76.42 161 17 ARG A 20 ? ? -65.18 -70.30 162 17 SER B 8 ? ? -68.35 -126.94 163 17 GLN B 10 ? ? -72.35 41.42 164 17 THR B 11 ? ? -163.44 -43.18 165 17 MET B 18 ? ? -100.42 -76.46 166 18 LEU A 15 ? ? -89.75 30.02 167 18 ARG A 20 ? ? -67.29 -127.10 168 18 LEU A 24 ? ? 53.93 -167.40 169 18 SER B 8 ? ? -78.23 -132.50 170 18 ASP B 9 ? ? -90.70 -155.52 171 18 GLN B 10 ? ? 37.73 45.71 172 18 THR B 11 ? ? -179.17 -47.53 173 18 MET B 18 ? ? -107.43 -83.11 174 19 SER A 8 ? ? -74.76 -135.20 175 19 ASP A 9 ? ? -78.44 -156.68 176 19 GLN A 10 ? ? 34.32 43.68 177 19 THR A 11 ? ? -172.19 -48.88 178 19 LEU A 15 ? ? -77.45 41.96 179 19 MET A 18 ? ? -116.51 -86.05 180 19 LEU B 15 ? ? -78.83 32.34 181 19 ALA B 19 ? ? -101.95 -68.40 182 19 TYR B 37 ? ? -55.95 172.63 183 20 SER A 8 ? ? -69.67 -171.55 184 20 GLN A 10 ? ? -75.63 42.19 185 20 THR A 11 ? ? -169.30 -31.87 186 20 ASP A 14 ? ? -46.46 -13.58 187 20 LEU A 15 ? ? -140.14 46.45 188 20 ALA A 19 ? ? -98.79 -60.32 189 20 LEU B 15 ? ? -73.24 25.89 190 20 ALA B 19 ? ? -99.73 -69.06 191 21 SER A 8 ? ? -75.50 -137.40 192 21 ASP A 9 ? ? -84.27 -155.76 193 21 GLN A 10 ? ? 36.01 43.11 194 21 THR A 11 ? ? -173.03 -45.38 195 21 ARG A 20 ? ? -70.42 -124.04 196 21 LEU A 24 ? ? 53.04 -162.91 197 21 SER B 8 ? ? -78.03 -126.57 198 21 GLN B 10 ? ? -73.42 39.82 199 21 THR B 11 ? ? -159.50 -41.34 200 21 MET B 18 ? ? -89.98 -77.01 201 21 ARG B 20 ? ? -68.91 -71.02 202 22 LEU A 3 ? ? -176.76 145.49 203 22 SER A 8 ? ? -82.36 -129.03 204 22 GLN A 10 ? ? -73.89 41.69 205 22 THR A 11 ? ? -164.41 -44.70 206 22 LEU A 15 ? ? -83.96 32.72 207 22 GLU A 16 ? ? -107.57 -69.35 208 22 ARG A 20 ? ? -66.43 -131.13 209 22 LEU A 24 ? ? 54.62 -166.45 210 22 LEU B 15 ? ? -77.75 28.40 211 22 ALA B 19 ? ? -102.66 -62.25 212 23 MET A 18 ? ? -108.06 -74.89 213 23 SER B 8 ? ? -67.05 -117.69 214 23 ASP B 9 ? ? -114.24 -147.35 215 23 GLN B 10 ? ? 34.36 44.40 216 23 THR B 11 ? ? -177.48 -46.50 217 23 LEU B 15 ? ? -71.63 43.96 218 23 MET B 18 ? ? -103.15 -84.68 219 24 SER A 8 ? ? -80.16 -145.94 220 24 ASP A 9 ? ? -75.87 -159.82 221 24 GLN A 10 ? ? 36.11 44.87 222 24 THR A 11 ? ? -176.01 -43.98 223 24 LEU A 15 ? ? -66.82 6.08 224 24 ALA A 19 ? ? -103.98 -64.49 225 24 LYS A 26 ? ? -39.43 -37.84 226 24 TYR A 37 ? ? -69.48 -166.29 227 24 LEU B 15 ? ? -74.75 27.65 228 24 ALA B 19 ? ? -97.93 -69.17 229 24 LEU B 24 ? ? -179.11 -177.62 230 25 ARG A 20 ? ? -68.20 -70.23 231 25 LEU A 24 ? ? 169.46 -174.35 232 25 TYR A 37 ? ? -30.79 130.87 233 25 LEU B 15 ? ? -72.72 28.36 234 25 ALA B 19 ? ? -101.34 -67.63 235 25 TYR B 37 ? ? -66.30 -169.29 236 26 ASP A 9 ? ? -61.93 -162.11 237 26 GLN A 10 ? ? 36.54 40.43 238 26 THR A 11 ? ? -179.78 -56.46 239 26 MET A 18 ? ? -64.26 -72.69 240 26 ALA A 19 ? ? -28.50 -32.17 241 26 ARG A 20 ? ? -66.22 -121.20 242 26 LEU A 24 ? ? 51.31 -159.88 243 26 LEU B 15 ? ? -79.09 22.88 244 27 SER A 8 ? ? -74.07 -168.22 245 27 LEU A 15 ? ? -81.32 31.56 246 27 ARG A 20 ? ? -64.28 -134.77 247 27 LEU A 24 ? ? 53.75 -163.26 248 27 ASP B 9 ? ? -63.30 -163.55 249 27 GLN B 10 ? ? 35.37 41.75 250 27 THR B 11 ? ? -178.38 -56.15 251 27 LEU B 15 ? ? -67.64 14.69 252 27 ALA B 19 ? ? -99.22 -69.51 253 28 GLN A 10 ? ? -71.37 32.25 254 28 THR A 11 ? ? -171.18 -50.26 255 28 LEU A 15 ? ? -67.51 14.60 256 28 ALA A 19 ? ? -102.30 -65.87 257 28 TYR A 37 ? ? -67.40 -168.95 258 28 LEU B 15 ? ? -78.38 29.91 259 28 ALA B 19 ? ? -103.19 -67.15 260 28 TYR B 37 ? ? -35.89 144.88 261 29 ASP A 9 ? ? -63.61 -165.14 262 29 GLN A 10 ? ? 36.83 40.68 263 29 THR A 11 ? ? 177.39 -51.21 264 29 LEU A 15 ? ? -69.20 20.21 265 29 ALA A 19 ? ? -100.63 -64.66 266 29 SER B 8 ? ? -69.66 -135.71 267 29 GLN B 10 ? ? -73.59 41.83 268 29 THR B 11 ? ? -165.27 -37.68 269 29 ASP B 14 ? ? -41.99 -19.99 270 29 ALA B 19 ? ? -100.91 -64.82 271 29 TYR B 37 ? ? -48.48 150.24 272 30 SER A 8 ? ? -67.70 -139.18 273 30 ASP A 9 ? ? -99.00 -142.64 274 30 GLN A 10 ? ? 33.38 42.11 275 30 THR A 11 ? ? -176.34 -49.90 276 30 LEU A 15 ? ? -63.02 4.52 277 30 ALA A 19 ? ? -101.35 -60.62 278 30 LEU A 24 ? ? 177.02 -178.49 279 30 LEU B 15 ? ? -77.34 32.31 280 30 ALA B 19 ? ? -99.92 -65.51 281 31 SER A 8 ? ? -67.62 -140.62 282 31 GLN A 10 ? ? -72.55 39.45 283 31 THR A 11 ? ? -163.59 -43.06 284 31 ALA A 19 ? ? -25.18 -34.50 285 31 ARG A 20 ? ? -70.21 -113.88 286 31 SER A 25 ? ? 131.68 163.23 287 31 SER B 8 ? ? -73.86 -135.91 288 31 GLN B 10 ? ? -72.29 41.31 289 31 THR B 11 ? ? -160.57 -44.49 290 31 LEU B 15 ? ? -82.13 32.89 291 31 MET B 18 ? ? -110.83 -75.53 292 31 ALA B 19 ? ? -25.46 -32.57 293 31 ARG B 20 ? ? -62.50 -141.46 294 31 LEU B 24 ? ? 53.55 -161.97 295 32 SER A 8 ? ? -72.37 -136.79 296 32 ASP A 9 ? ? -88.14 -156.46 297 32 GLN A 10 ? ? 34.15 44.10 298 32 THR A 11 ? ? -172.65 -46.45 299 32 LEU A 15 ? ? -73.51 22.73 300 32 TYR A 37 ? ? -29.33 133.02 301 32 SER B 8 ? ? -81.34 -157.94 302 32 GLN B 10 ? ? -74.33 42.28 303 32 THR B 11 ? ? -167.83 -43.63 304 32 LEU B 15 ? ? -81.57 40.56 305 32 MET B 18 ? ? -105.36 -84.52 #