HEADER TRANSFERASE 08-AUG-14 2MSW TITLE LIGAND-INDUCED FOLDING OF A RECEIVER DOMAIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: RESPONSE REGULATOR/SENSOR HISTIDINE KINASE; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ERYTHROBACTER LITORALIS; SOURCE 3 ORGANISM_TAXID: 314225; SOURCE 4 STRAIN: HTCC2594; SOURCE 5 GENE: ELI_07655; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_VECTOR: PHIS-PARALLEL KEYWDS REC, RESPONSE REGULATOR, TWO COMPONENT SYSTEM, TRANSFERASE EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR V.J.OCASIO,F.CORREA,K.H.GARDNER REVDAT 3 14-JUN-23 2MSW 1 REMARK SEQADV REVDAT 2 08-APR-15 2MSW 1 JRNL REVDAT 1 11-FEB-15 2MSW 0 JRNL AUTH V.J.OCASIO,F.CORREA,K.H.GARDNER JRNL TITL LIGAND-INDUCED FOLDING OF A TWO-COMPONENT SIGNALING RECEIVER JRNL TITL 2 DOMAIN. JRNL REF BIOCHEMISTRY V. 54 1353 2015 JRNL REFN ISSN 0006-2960 JRNL PMID 25629646 JRNL DOI 10.1021/BI501143B REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : ARIA 2.3, ARIA 2.3 REMARK 3 AUTHORS : LINGE, O'DONOGHUE AND NILGES (ARIA), LINGE, REMARK 3 O'DONOGHUE AND NILGES (ARIA) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2MSW COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 28-AUG-14. REMARK 100 THE DEPOSITION ID IS D_1000104006. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 7.5 REMARK 210 IONIC STRENGTH : 0 REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 3 MM SODIUM AZIDE, 1 MM DTT, 20 REMARK 210 MM HEPES, 1.8 MG/ML AEBSF REMARK 210 PROTEASE INHIBITOR, 10 % D2O, REMARK 210 500 UM [U-100% 13C; U-100% 15N] REMARK 210 EL_LOVR, 15 MM BERYLLIUM REMARK 210 FLUORIDE, 10 MM MAGNESIUM REMARK 210 CHLORIDE, 90% H2O/10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D 1H-15N HSQC; 3D CBCA(CO)NH; REMARK 210 3D HNCO; 3D HNCACB; 3D H(CCO)NH; REMARK 210 3D C(CO)NH; 3D HCCH-TOCSY; 3D 1H- REMARK 210 13C NOESY; 3D 1H-15N NOESY; 2D REMARK 210 1H-13C HSQC REMARK 210 SPECTROMETER FIELD STRENGTH : 800 MHZ; 600 MHZ REMARK 210 SPECTROMETER MODEL : INOVA REMARK 210 SPECTROMETER MANUFACTURER : VARIAN REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NMRVIEW 9.0.0-B114, NMRPIPE, REMARK 210 VNMRJ REMARK 210 METHOD USED : SIMULATED ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 20 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : ALL CALCULATED STRUCTURES REMARK 210 SUBMITTED REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OD1 ASP A 106 HG SER A 108 1.59 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 GLU A 12 113.47 -161.21 REMARK 500 1 ASN A 58 62.36 -108.68 REMARK 500 1 CYS A 65 87.03 -69.70 REMARK 500 1 HIS A 89 40.01 -144.31 REMARK 500 1 ASP A 97 76.54 57.03 REMARK 500 1 LYS A 122 115.74 71.01 REMARK 500 2 ALA A 2 141.52 70.78 REMARK 500 2 HIS A 82 77.62 -101.35 REMARK 500 2 ASP A 97 77.49 61.26 REMARK 500 2 ASP A 121 17.44 -144.01 REMARK 500 3 ASN A 58 56.28 -111.70 REMARK 500 3 HIS A 82 71.80 -103.00 REMARK 500 3 ASP A 97 78.40 59.97 REMARK 500 3 CYS A 118 67.96 -151.43 REMARK 500 4 HIS A 82 72.28 -103.02 REMARK 500 4 ASP A 97 70.37 55.51 REMARK 500 4 ASP A 121 154.51 73.30 REMARK 500 4 LYS A 122 63.84 63.45 REMARK 500 5 ASP A 85 60.44 -111.21 REMARK 500 5 ASP A 97 74.22 54.02 REMARK 500 5 PRO A 124 49.14 -72.73 REMARK 500 6 GLU A 12 127.23 -170.16 REMARK 500 6 CYS A 65 87.67 -67.44 REMARK 500 6 ASP A 97 75.58 62.47 REMARK 500 6 ASP A 121 -156.96 56.67 REMARK 500 7 ASN A 58 63.27 -114.96 REMARK 500 7 HIS A 82 74.01 -103.66 REMARK 500 7 ASP A 97 75.26 64.47 REMARK 500 8 ASN A 58 75.53 -113.01 REMARK 500 8 HIS A 82 72.52 -103.46 REMARK 500 8 LEU A 86 -31.88 -130.08 REMARK 500 8 ASP A 97 75.96 55.21 REMARK 500 9 MET A 5 141.38 56.74 REMARK 500 9 CYS A 118 98.21 -175.73 REMARK 500 9 ASP A 121 -177.92 68.76 REMARK 500 9 PRO A 124 73.48 -65.42 REMARK 500 10 MET A 3 -23.46 74.26 REMARK 500 10 ASP A 85 51.09 -97.29 REMARK 500 10 ASP A 97 76.00 58.51 REMARK 500 11 MET A 5 131.55 68.22 REMARK 500 11 ASP A 97 83.11 61.40 REMARK 500 11 ASP A 121 -157.59 -156.63 REMARK 500 12 ASN A 58 53.82 -116.32 REMARK 500 12 CYS A 65 86.31 -68.76 REMARK 500 12 ASP A 97 82.07 62.54 REMARK 500 12 ASP A 121 24.19 -155.67 REMARK 500 12 PRO A 124 89.27 -67.93 REMARK 500 13 ALA A 2 49.34 -81.14 REMARK 500 13 CYS A 65 87.27 -69.49 REMARK 500 13 HIS A 82 78.95 -101.61 REMARK 500 REMARK 500 THIS ENTRY HAS 68 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 25137 RELATED DB: BMRB DBREF 2MSW A 5 125 UNP Q2N9L8 Q2N9L8_ERYLH 1 121 SEQADV 2MSW GLY A 1 UNP Q2N9L8 EXPRESSION TAG SEQADV 2MSW ALA A 2 UNP Q2N9L8 EXPRESSION TAG SEQADV 2MSW MET A 3 UNP Q2N9L8 EXPRESSION TAG SEQADV 2MSW GLY A 4 UNP Q2N9L8 EXPRESSION TAG SEQRES 1 A 125 GLY ALA MET GLY MET PRO LYS VAL LEU VAL LEU GLU ASP SEQRES 2 A 125 GLU PRO LEU ILE ALA MET ASN LEU GLN TYR ALA PHE GLU SEQRES 3 A 125 ASP GLU GLY ALA GLU VAL VAL VAL ALA ALA THR CYS GLU SEQRES 4 A 125 GLN ALA LEU LYS SER LEU ALA ASP ASN PRO ILE ASP VAL SEQRES 5 A 125 ALA VAL LEU ASP VAL ASN LEU GLY PRO LYS SER HIS CYS SEQRES 6 A 125 GLY PRO VAL ALA ASP ALA LEU LYS GLN ARG ALA ILE PRO SEQRES 7 A 125 PHE ILE LEU HIS THR GLY ASP LEU ASP ARG HIS GLY GLU SEQRES 8 A 125 LEU LEU ARG LYS ILE ASP ALA PRO VAL MET ALA LYS PRO SEQRES 9 A 125 ALA ASP THR SER ASP VAL ALA LYS ARG ALA LEU GLU MET SEQRES 10 A 125 CYS GLY GLY ASP LYS GLU PRO ALA HELIX 1 1 GLU A 14 GLY A 29 1 16 HELIX 2 2 THR A 37 ASN A 48 1 12 HELIX 3 3 GLY A 66 ALA A 76 1 11 HELIX 4 4 LEU A 86 ARG A 88 5 3 HELIX 5 5 HIS A 89 ASP A 97 1 9 HELIX 6 6 ASP A 106 GLY A 119 1 14 SHEET 1 A 4 GLU A 31 ALA A 35 0 SHEET 2 A 4 LYS A 7 LEU A 11 1 N VAL A 8 O GLU A 31 SHEET 3 A 4 VAL A 52 LEU A 55 1 O VAL A 54 N LEU A 11 SHEET 4 A 4 PHE A 79 LEU A 81 1 O ILE A 80 N LEU A 55 CISPEP 1 LYS A 103 PRO A 104 1 2.07 CISPEP 2 LYS A 103 PRO A 104 2 2.37 CISPEP 3 LYS A 103 PRO A 104 3 2.89 CISPEP 4 LYS A 103 PRO A 104 4 0.70 CISPEP 5 LYS A 103 PRO A 104 5 1.40 CISPEP 6 LYS A 103 PRO A 104 6 3.00 CISPEP 7 LYS A 103 PRO A 104 7 2.65 CISPEP 8 LYS A 103 PRO A 104 8 3.85 CISPEP 9 LYS A 103 PRO A 104 9 0.86 CISPEP 10 LYS A 103 PRO A 104 10 2.13 CISPEP 11 LYS A 103 PRO A 104 11 0.86 CISPEP 12 LYS A 103 PRO A 104 12 -0.21 CISPEP 13 LYS A 103 PRO A 104 13 1.57 CISPEP 14 LYS A 103 PRO A 104 14 1.46 CISPEP 15 LYS A 103 PRO A 104 15 -1.67 CISPEP 16 LYS A 103 PRO A 104 16 1.97 CISPEP 17 LYS A 103 PRO A 104 17 1.65 CISPEP 18 LYS A 103 PRO A 104 18 -0.94 CISPEP 19 LYS A 103 PRO A 104 19 3.40 CISPEP 20 LYS A 103 PRO A 104 20 2.02 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1