data_2N5W # _entry.id 2N5W # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.381 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_code _database_2.database_id _database_2.pdbx_database_accession _database_2.pdbx_DOI RCSB104461 RCSB ? ? 2N5W PDB pdb_00002n5w 10.2210/pdb2n5w/pdb 25737 BMRB ? ? D_1000104461 WWPDB ? ? # _pdbx_database_related.db_id 25737 _pdbx_database_related.db_name BMRB _pdbx_database_related.content_type unspecified _pdbx_database_related.details . # _pdbx_database_status.deposit_site BMRB _pdbx_database_status.entry_id 2N5W _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2015-08-01 _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code REL _pdbx_database_status.status_code_mr REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_cs REL _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Cochrane, S.A.' 1 'Findlay, B.' 2 'Bakhtiary, A.' 3 'Acedo, J.Z.' 4 'Rodriguez-Lopez, E.M.' 5 'Vederas, J.C.' 6 # _citation.id primary _citation.title 'Antimicrobial lipopeptide tridecaptin A1 selectively binds to Gram-negative lipid II.' _citation.journal_abbrev Proc.Natl.Acad.Sci.USA _citation.journal_volume 113 _citation.page_first 11561 _citation.page_last 11566 _citation.year 2016 _citation.journal_id_ASTM PNASA6 _citation.country US _citation.journal_id_ISSN 0027-8424 _citation.journal_id_CSD 0040 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 27688760 _citation.pdbx_database_id_DOI 10.1073/pnas.1608623113 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Cochrane, S.A.' 1 ? primary 'Findlay, B.' 2 ? primary 'Bakhtiary, A.' 3 ? primary 'Acedo, J.Z.' 4 ? primary 'Rodriguez-Lopez, E.M.' 5 ? primary 'Mercier, P.' 6 ? primary 'Vederas, J.C.' 7 ? # _entity.id 1 _entity.type polymer _entity.src_method syn _entity.pdbx_description 'Octyl-tridecaptin A1' _entity.formula_weight 1520.770 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.details ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code '(4N3)(4FO)GSWS(DAB)(4FO)FEV(28J)A' _entity_poly.pdbx_seq_one_letter_code_can XXGSWSAXFEVXA _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 4N3 n 1 2 4FO n 1 3 GLY n 1 4 SER n 1 5 TRP n 1 6 SER n 1 7 DAB n 1 8 4FO n 1 9 PHE n 1 10 GLU n 1 11 VAL n 1 12 28J n 1 13 ALA n # _pdbx_entity_src_syn.entity_id 1 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num ? _pdbx_entity_src_syn.pdbx_end_seq_num ? _pdbx_entity_src_syn.organism_scientific ? _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id ? _pdbx_entity_src_syn.details 'Fmoc-SPPS synthesis' # _struct_ref.id 1 _struct_ref.db_name PDB _struct_ref.db_code 2N5W _struct_ref.pdbx_db_accession 2N5W _struct_ref.entity_id 1 _struct_ref.pdbx_align_begin ? _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 2N5W _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 13 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession 2N5W _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 13 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 13 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight 28J 'D-peptide linking' . D-alloisoleucine ? 'C6 H13 N O2' 131.173 4FO 'D-peptide linking' . '(2R)-2,4-diaminobutanoic acid' ? 'C4 H10 N2 O2' 118.134 4N3 'D-peptide linking' . N-octanoyl-D-valine ? 'C13 H25 N O3' 243.342 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 DAB 'L-peptide linking' n '2,4-DIAMINOBUTYRIC ACID' ? 'C4 H10 N2 O2' 118.134 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.solution_id _pdbx_nmr_exptl.type 1 1 1 '2D 1H-1H TOCSY' 1 2 1 '2D 1H-1H NOESY' # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.ionic_strength ? _pdbx_nmr_exptl_sample_conditions.pH 6 _pdbx_nmr_exptl_sample_conditions.pressure ambient _pdbx_nmr_exptl_sample_conditions.pressure_units ? _pdbx_nmr_exptl_sample_conditions.temperature 300 _pdbx_nmr_exptl_sample_conditions.temperature_units K # _pdbx_nmr_sample_details.contents '180 mM DPC, 90% H2O/10% D2O' _pdbx_nmr_sample_details.solution_id 1 _pdbx_nmr_sample_details.solvent_system '90% H2O/10% D2O' # _pdbx_nmr_spectrometer.field_strength 600 _pdbx_nmr_spectrometer.manufacturer Varian _pdbx_nmr_spectrometer.model INOVA _pdbx_nmr_spectrometer.spectrometer_id 1 _pdbx_nmr_spectrometer.type 'Varian INOVA' # _pdbx_nmr_refine.entry_id 2N5W _pdbx_nmr_refine.method 'distance geometry' _pdbx_nmr_refine.details ? _pdbx_nmr_refine.software_ordinal 1 # _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.conformer_selection_criteria 'target function' _pdbx_nmr_ensemble.conformers_calculated_total_number 100 _pdbx_nmr_ensemble.conformers_submitted_total_number 20 _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.entry_id 2N5W _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.entry_id 2N5W _pdbx_nmr_representative.selection_criteria 'lowest energy' # _pdbx_nmr_software.authors 'Guntert P.' _pdbx_nmr_software.classification refinement _pdbx_nmr_software.name CYANA _pdbx_nmr_software.version ? _pdbx_nmr_software.ordinal 1 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.crystals_number ? _exptl.details ;The NMR solution structure of octyl-tridecaptin A1 in DPC micelles. The N-terminal lipid tail was omitted in the structure calculation. ; _exptl.entry_id 2N5W _exptl.method 'SOLUTION NMR' _exptl.method_details ? # _struct.entry_id 2N5W _struct.title 'The NMR solution structure of octyl-tridecaptin A1 in DPC micelles' _struct.pdbx_model_details 'lowest energy, model1' _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2N5W _struct_keywords.pdbx_keywords 'ANTIMICROBIAL PROTEIN' _struct_keywords.text 'Tridecaptin A1, Lipopeptide, Antimicrobial, Antibiotic, Non-ribosomal, Antimicrobial protein' # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale one ? A 4N3 1 C ? ? ? 1_555 A 4FO 2 N ? ? A 4N3 1 A 4FO 2 1_555 ? ? ? ? ? ? ? 1.361 ? ? covale2 covale both ? A 4FO 2 C ? ? ? 1_555 A GLY 3 N ? ? A 4FO 2 A GLY 3 1_555 ? ? ? ? ? ? ? 1.330 ? ? covale3 covale both ? A SER 6 C ? ? ? 1_555 A DAB 7 N ? ? A SER 6 A DAB 7 1_555 ? ? ? ? ? ? ? 1.361 ? ? covale4 covale both ? A DAB 7 C ? ? ? 1_555 A 4FO 8 N ? ? A DAB 7 A 4FO 8 1_555 ? ? ? ? ? ? ? 1.362 ? ? covale5 covale both ? A 4FO 8 C ? ? ? 1_555 A PHE 9 N ? ? A 4FO 8 A PHE 9 1_555 ? ? ? ? ? ? ? 1.329 ? ? covale6 covale both ? A VAL 11 C ? ? ? 1_555 A 28J 12 N ? ? A VAL 11 A 28J 12 1_555 ? ? ? ? ? ? ? 1.360 ? ? covale7 covale both ? A 28J 12 C ? ? ? 1_555 A ALA 13 N ? ? A 28J 12 A ALA 13 1_555 ? ? ? ? ? ? ? 1.329 ? ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # _atom_sites.entry_id 2N5W _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 4N3 1 1 1 4N3 DVA A . n A 1 2 4FO 2 2 2 4FO 4FO A . n A 1 3 GLY 3 3 3 GLY GLY A . n A 1 4 SER 4 4 4 SER SER A . n A 1 5 TRP 5 5 5 TRP TRP A . n A 1 6 SER 6 6 6 SER SER A . n A 1 7 DAB 7 7 7 DAB DAB A . n A 1 8 4FO 8 8 8 4FO 4FO A . n A 1 9 PHE 9 9 9 PHE PHE A . n A 1 10 GLU 10 10 10 GLU GLU A . n A 1 11 VAL 11 11 11 VAL VAL A . n A 1 12 28J 12 12 12 28J 28J A . n A 1 13 ALA 13 13 13 ALA ALA A . n # _pdbx_struct_mod_residue.id 1 _pdbx_struct_mod_residue.label_asym_id A _pdbx_struct_mod_residue.label_comp_id DAB _pdbx_struct_mod_residue.label_seq_id 7 _pdbx_struct_mod_residue.auth_asym_id A _pdbx_struct_mod_residue.auth_comp_id DAB _pdbx_struct_mod_residue.auth_seq_id 7 _pdbx_struct_mod_residue.PDB_ins_code ? _pdbx_struct_mod_residue.parent_comp_id ALA _pdbx_struct_mod_residue.details '2,4-DIAMINOBUTYRIC ACID' # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2016-09-28 2 'Structure model' 1 1 2016-10-19 3 'Structure model' 1 2 2016-10-26 4 'Structure model' 2 0 2023-11-15 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Database references' 3 4 'Structure model' 'Atomic model' 4 4 'Structure model' 'Data collection' 5 4 'Structure model' 'Database references' 6 4 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' atom_site 2 4 'Structure model' chem_comp_atom 3 4 'Structure model' chem_comp_bond 4 4 'Structure model' database_2 5 4 'Structure model' struct_conn # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_atom_site.auth_atom_id' 2 4 'Structure model' '_atom_site.label_atom_id' 3 4 'Structure model' '_database_2.pdbx_DOI' 4 4 'Structure model' '_database_2.pdbx_database_accession' 5 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' # _pdbx_nmr_exptl_sample.component DPC-1 _pdbx_nmr_exptl_sample.concentration 180 _pdbx_nmr_exptl_sample.concentration_range ? _pdbx_nmr_exptl_sample.concentration_units mM _pdbx_nmr_exptl_sample.isotopic_labeling ? _pdbx_nmr_exptl_sample.solution_id 1 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 4FO A 2 ? ? -67.95 -163.42 2 1 TRP A 5 ? ? -89.46 -72.82 3 1 DAB A 7 ? ? 68.59 -171.06 4 1 4FO A 8 ? ? -56.46 175.72 5 2 4FO A 2 ? ? -69.04 -150.78 6 2 TRP A 5 ? ? -89.48 -72.77 7 2 DAB A 7 ? ? 66.99 179.52 8 2 4FO A 8 ? ? -62.85 -178.04 9 3 4FO A 2 ? ? -68.89 -114.73 10 3 TRP A 5 ? ? -89.67 -72.88 11 3 DAB A 7 ? ? 54.05 -175.97 12 3 4FO A 8 ? ? -64.20 -165.83 13 3 28J A 12 ? ? 95.26 -31.77 14 4 4FO A 2 ? ? -69.08 -145.04 15 4 TRP A 5 ? ? -89.48 -72.86 16 5 4FO A 2 ? ? -69.11 -144.98 17 5 TRP A 5 ? ? -89.68 -72.84 18 5 DAB A 7 ? ? 53.64 -174.91 19 5 4FO A 8 ? ? -62.93 179.66 20 5 GLU A 10 ? ? -108.04 43.36 21 6 TRP A 5 ? ? -89.34 -72.59 22 6 DAB A 7 ? ? -178.20 -50.71 23 7 4FO A 2 ? ? -69.06 -145.64 24 7 SER A 4 ? ? 56.72 93.72 25 7 TRP A 5 ? ? -87.44 -72.65 26 7 DAB A 7 ? ? -171.37 -45.15 27 7 GLU A 10 ? ? -140.84 26.50 28 8 4FO A 2 ? ? -63.08 -167.86 29 8 SER A 4 ? ? 58.32 94.96 30 8 TRP A 5 ? ? -90.96 -72.74 31 8 DAB A 7 ? ? -178.18 -39.88 32 9 4FO A 2 ? ? -69.03 -145.35 33 9 TRP A 5 ? ? -89.63 -72.70 34 9 DAB A 7 ? ? 57.52 175.49 35 9 4FO A 8 ? ? 52.74 -176.07 36 10 4FO A 2 ? ? 172.31 173.45 37 10 SER A 4 ? ? -64.49 -174.36 38 10 TRP A 5 ? ? -89.39 -72.76 39 10 SER A 6 ? ? -64.77 -172.18 40 10 DAB A 7 ? ? -47.72 152.33 41 11 4FO A 2 ? ? 178.18 178.54 42 11 SER A 4 ? ? -177.76 109.09 43 11 TRP A 5 ? ? -93.20 -72.59 44 11 DAB A 7 ? ? -178.36 37.32 45 12 4FO A 2 ? ? -66.93 -160.95 46 12 TRP A 5 ? ? -86.69 -72.37 47 12 SER A 6 ? ? -55.19 179.25 48 12 4FO A 8 ? ? -56.25 176.02 49 13 4FO A 2 ? ? -63.53 -166.27 50 13 SER A 4 ? ? -71.01 -169.95 51 13 TRP A 5 ? ? -86.79 -72.56 52 13 DAB A 7 ? ? -47.61 164.22 53 13 GLU A 10 ? ? -139.42 -48.65 54 14 4FO A 2 ? ? 178.22 -149.64 55 14 TRP A 5 ? ? -89.69 -72.33 56 14 SER A 6 ? ? -53.94 170.95 57 14 DAB A 7 ? ? -54.83 -170.86 58 15 4FO A 2 ? ? 178.13 -118.71 59 15 SER A 4 ? ? -61.09 -169.93 60 15 TRP A 5 ? ? -88.46 -72.52 61 15 SER A 6 ? ? -81.87 -72.30 62 15 GLU A 10 ? ? -134.69 -41.26 63 16 TRP A 5 ? ? -88.32 -72.34 64 16 DAB A 7 ? ? -47.89 164.24 65 17 4FO A 2 ? ? -67.76 -151.44 66 17 SER A 4 ? ? -60.58 -170.93 67 17 TRP A 5 ? ? -87.47 -72.60 68 17 SER A 6 ? ? -80.82 -72.41 69 17 4FO A 8 ? ? 68.90 175.97 70 18 4FO A 2 ? ? 174.76 -139.85 71 18 TRP A 5 ? ? -93.14 -72.19 72 18 SER A 6 ? ? -56.04 -174.82 73 18 4FO A 8 ? ? -56.18 175.88 74 19 4FO A 2 ? ? 170.72 -142.81 75 19 SER A 4 ? ? 58.01 95.67 76 19 TRP A 5 ? ? -87.14 -72.45 77 19 DAB A 7 ? ? -171.04 35.47 78 20 4FO A 2 ? ? -69.14 -145.92 79 20 TRP A 5 ? ? -89.53 -72.81 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal 28J N N N N 1 28J CA C N R 2 28J CB C N S 3 28J CG2 C N N 4 28J CG1 C N N 5 28J CD1 C N N 6 28J C C N N 7 28J O O N N 8 28J H H N N 9 28J HA H N N 10 28J H22 H N N 11 28J H23 H N N 12 28J H24 H N N 13 28J H25 H N N 14 28J H26 H N N 15 28J H27 H N N 16 28J H28 H N N 17 28J H29 H N N 18 28J H30 H N N 19 28J H2 H N N 20 28J OXT O N N 21 28J HXT H N N 22 4FO N N N N 23 4FO CA C N R 24 4FO C C N N 25 4FO O O N N 26 4FO CB C N N 27 4FO CG C N N 28 4FO NZ N N N 29 4FO OXT O N N 30 4FO H H N N 31 4FO H2 H N N 32 4FO HA H N N 33 4FO HB2 H N N 34 4FO HB3 H N N 35 4FO HG3 H N N 36 4FO HG2 H N N 37 4FO HZ3 H N N 38 4FO HZ2 H N N 39 4FO HXT H N N 40 4N3 N N N N 41 4N3 CA C N R 42 4N3 CB C N N 43 4N3 CG1 C N N 44 4N3 CG2 C N N 45 4N3 C C N N 46 4N3 O O N N 47 4N3 CO1 C N N 48 4N3 O2 O N N 49 4N3 CD C N N 50 4N3 CE C N N 51 4N3 CF C N N 52 4N3 CH C N N 53 4N3 CI C N N 54 4N3 CJ C N N 55 4N3 CK C N N 56 4N3 H1 H N N 57 4N3 HA H N N 58 4N3 HB H N N 59 4N3 HG13 H N N 60 4N3 HG11 H N N 61 4N3 HG12 H N N 62 4N3 HG22 H N N 63 4N3 HG23 H N N 64 4N3 HG21 H N N 65 4N3 OXT O N N 66 4N3 HD2 H N N 67 4N3 HD1 H N N 68 4N3 HE1 H N N 69 4N3 HE2 H N N 70 4N3 HF2 H N N 71 4N3 HF1 H N N 72 4N3 HH1 H N N 73 4N3 HH2 H N N 74 4N3 HI1 H N N 75 4N3 HI2 H N N 76 4N3 HJ1 H N N 77 4N3 HJ2 H N N 78 4N3 HK3 H N N 79 4N3 HK2 H N N 80 4N3 HK1 H N N 81 4N3 HXT H N N 82 ALA N N N N 83 ALA CA C N S 84 ALA C C N N 85 ALA O O N N 86 ALA CB C N N 87 ALA OXT O N N 88 ALA H H N N 89 ALA H2 H N N 90 ALA HA H N N 91 ALA HB1 H N N 92 ALA HB2 H N N 93 ALA HB3 H N N 94 ALA HXT H N N 95 DAB N N N N 96 DAB CA C N S 97 DAB C C N N 98 DAB O O N N 99 DAB CB C N N 100 DAB CG C N N 101 DAB ND N N N 102 DAB OXT O N N 103 DAB H H N N 104 DAB H2 H N N 105 DAB HA H N N 106 DAB HB2 H N N 107 DAB HB3 H N N 108 DAB HG2 H N N 109 DAB HG3 H N N 110 DAB HD1 H N N 111 DAB HD2 H N N 112 DAB HXT H N N 113 GLU N N N N 114 GLU CA C N S 115 GLU C C N N 116 GLU O O N N 117 GLU CB C N N 118 GLU CG C N N 119 GLU CD C N N 120 GLU OE1 O N N 121 GLU OE2 O N N 122 GLU OXT O N N 123 GLU H H N N 124 GLU H2 H N N 125 GLU HA H N N 126 GLU HB2 H N N 127 GLU HB3 H N N 128 GLU HG2 H N N 129 GLU HG3 H N N 130 GLU HE2 H N N 131 GLU HXT H N N 132 GLY N N N N 133 GLY CA C N N 134 GLY C C N N 135 GLY O O N N 136 GLY OXT O N N 137 GLY H H N N 138 GLY H2 H N N 139 GLY HA2 H N N 140 GLY HA3 H N N 141 GLY HXT H N N 142 PHE N N N N 143 PHE CA C N S 144 PHE C C N N 145 PHE O O N N 146 PHE CB C N N 147 PHE CG C Y N 148 PHE CD1 C Y N 149 PHE CD2 C Y N 150 PHE CE1 C Y N 151 PHE CE2 C Y N 152 PHE CZ C Y N 153 PHE OXT O N N 154 PHE H H N N 155 PHE H2 H N N 156 PHE HA H N N 157 PHE HB2 H N N 158 PHE HB3 H N N 159 PHE HD1 H N N 160 PHE HD2 H N N 161 PHE HE1 H N N 162 PHE HE2 H N N 163 PHE HZ H N N 164 PHE HXT H N N 165 SER N N N N 166 SER CA C N S 167 SER C C N N 168 SER O O N N 169 SER CB C N N 170 SER OG O N N 171 SER OXT O N N 172 SER H H N N 173 SER H2 H N N 174 SER HA H N N 175 SER HB2 H N N 176 SER HB3 H N N 177 SER HG H N N 178 SER HXT H N N 179 TRP N N N N 180 TRP CA C N S 181 TRP C C N N 182 TRP O O N N 183 TRP CB C N N 184 TRP CG C Y N 185 TRP CD1 C Y N 186 TRP CD2 C Y N 187 TRP NE1 N Y N 188 TRP CE2 C Y N 189 TRP CE3 C Y N 190 TRP CZ2 C Y N 191 TRP CZ3 C Y N 192 TRP CH2 C Y N 193 TRP OXT O N N 194 TRP H H N N 195 TRP H2 H N N 196 TRP HA H N N 197 TRP HB2 H N N 198 TRP HB3 H N N 199 TRP HD1 H N N 200 TRP HE1 H N N 201 TRP HE3 H N N 202 TRP HZ2 H N N 203 TRP HZ3 H N N 204 TRP HH2 H N N 205 TRP HXT H N N 206 VAL N N N N 207 VAL CA C N S 208 VAL C C N N 209 VAL O O N N 210 VAL CB C N N 211 VAL CG1 C N N 212 VAL CG2 C N N 213 VAL OXT O N N 214 VAL H H N N 215 VAL H2 H N N 216 VAL HA H N N 217 VAL HB H N N 218 VAL HG11 H N N 219 VAL HG12 H N N 220 VAL HG13 H N N 221 VAL HG21 H N N 222 VAL HG22 H N N 223 VAL HG23 H N N 224 VAL HXT H N N 225 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 28J CG2 CB sing N N 1 28J CB CG1 sing N N 2 28J CB CA sing N N 3 28J CG1 CD1 sing N N 4 28J CA N sing N N 5 28J CA C sing N N 6 28J C O doub N N 7 28J N H sing N N 8 28J CA HA sing N N 9 28J CB H22 sing N N 10 28J CG2 H23 sing N N 11 28J CG2 H24 sing N N 12 28J CG2 H25 sing N N 13 28J CG1 H26 sing N N 14 28J CG1 H27 sing N N 15 28J CD1 H28 sing N N 16 28J CD1 H29 sing N N 17 28J CD1 H30 sing N N 18 28J N H2 sing N N 19 28J C OXT sing N N 20 28J OXT HXT sing N N 21 4FO CG NZ sing N N 22 4FO CG CB sing N N 23 4FO N CA sing N N 24 4FO CA CB sing N N 25 4FO CA C sing N N 26 4FO C O doub N N 27 4FO C OXT sing N N 28 4FO N H sing N N 29 4FO N H2 sing N N 30 4FO CA HA sing N N 31 4FO CB HB2 sing N N 32 4FO CB HB3 sing N N 33 4FO CG HG3 sing N N 34 4FO CG HG2 sing N N 35 4FO NZ HZ3 sing N N 36 4FO NZ HZ2 sing N N 37 4FO OXT HXT sing N N 38 4N3 C O doub N N 39 4N3 C CA sing N N 40 4N3 N CA sing N N 41 4N3 N CO1 sing N N 42 4N3 CB CA sing N N 43 4N3 CB CG2 sing N N 44 4N3 CB CG1 sing N N 45 4N3 CD CO1 sing N N 46 4N3 CD CE sing N N 47 4N3 CF CE sing N N 48 4N3 CF CH sing N N 49 4N3 CO1 O2 doub N N 50 4N3 CI CH sing N N 51 4N3 CI CJ sing N N 52 4N3 CJ CK sing N N 53 4N3 N H1 sing N N 54 4N3 CA HA sing N N 55 4N3 CB HB sing N N 56 4N3 CG1 HG13 sing N N 57 4N3 CG1 HG11 sing N N 58 4N3 CG1 HG12 sing N N 59 4N3 CG2 HG22 sing N N 60 4N3 CG2 HG23 sing N N 61 4N3 CG2 HG21 sing N N 62 4N3 C OXT sing N N 63 4N3 CD HD2 sing N N 64 4N3 CD HD1 sing N N 65 4N3 CE HE1 sing N N 66 4N3 CE HE2 sing N N 67 4N3 CF HF2 sing N N 68 4N3 CF HF1 sing N N 69 4N3 CH HH1 sing N N 70 4N3 CH HH2 sing N N 71 4N3 CI HI1 sing N N 72 4N3 CI HI2 sing N N 73 4N3 CJ HJ1 sing N N 74 4N3 CJ HJ2 sing N N 75 4N3 CK HK3 sing N N 76 4N3 CK HK2 sing N N 77 4N3 CK HK1 sing N N 78 4N3 OXT HXT sing N N 79 ALA N CA sing N N 80 ALA N H sing N N 81 ALA N H2 sing N N 82 ALA CA C sing N N 83 ALA CA CB sing N N 84 ALA CA HA sing N N 85 ALA C O doub N N 86 ALA C OXT sing N N 87 ALA CB HB1 sing N N 88 ALA CB HB2 sing N N 89 ALA CB HB3 sing N N 90 ALA OXT HXT sing N N 91 DAB N CA sing N N 92 DAB N H sing N N 93 DAB N H2 sing N N 94 DAB CA C sing N N 95 DAB CA CB sing N N 96 DAB CA HA sing N N 97 DAB C O doub N N 98 DAB C OXT sing N N 99 DAB CB CG sing N N 100 DAB CB HB2 sing N N 101 DAB CB HB3 sing N N 102 DAB CG ND sing N N 103 DAB CG HG2 sing N N 104 DAB CG HG3 sing N N 105 DAB ND HD1 sing N N 106 DAB ND HD2 sing N N 107 DAB OXT HXT sing N N 108 GLU N CA sing N N 109 GLU N H sing N N 110 GLU N H2 sing N N 111 GLU CA C sing N N 112 GLU CA CB sing N N 113 GLU CA HA sing N N 114 GLU C O doub N N 115 GLU C OXT sing N N 116 GLU CB CG sing N N 117 GLU CB HB2 sing N N 118 GLU CB HB3 sing N N 119 GLU CG CD sing N N 120 GLU CG HG2 sing N N 121 GLU CG HG3 sing N N 122 GLU CD OE1 doub N N 123 GLU CD OE2 sing N N 124 GLU OE2 HE2 sing N N 125 GLU OXT HXT sing N N 126 GLY N CA sing N N 127 GLY N H sing N N 128 GLY N H2 sing N N 129 GLY CA C sing N N 130 GLY CA HA2 sing N N 131 GLY CA HA3 sing N N 132 GLY C O doub N N 133 GLY C OXT sing N N 134 GLY OXT HXT sing N N 135 PHE N CA sing N N 136 PHE N H sing N N 137 PHE N H2 sing N N 138 PHE CA C sing N N 139 PHE CA CB sing N N 140 PHE CA HA sing N N 141 PHE C O doub N N 142 PHE C OXT sing N N 143 PHE CB CG sing N N 144 PHE CB HB2 sing N N 145 PHE CB HB3 sing N N 146 PHE CG CD1 doub Y N 147 PHE CG CD2 sing Y N 148 PHE CD1 CE1 sing Y N 149 PHE CD1 HD1 sing N N 150 PHE CD2 CE2 doub Y N 151 PHE CD2 HD2 sing N N 152 PHE CE1 CZ doub Y N 153 PHE CE1 HE1 sing N N 154 PHE CE2 CZ sing Y N 155 PHE CE2 HE2 sing N N 156 PHE CZ HZ sing N N 157 PHE OXT HXT sing N N 158 SER N CA sing N N 159 SER N H sing N N 160 SER N H2 sing N N 161 SER CA C sing N N 162 SER CA CB sing N N 163 SER CA HA sing N N 164 SER C O doub N N 165 SER C OXT sing N N 166 SER CB OG sing N N 167 SER CB HB2 sing N N 168 SER CB HB3 sing N N 169 SER OG HG sing N N 170 SER OXT HXT sing N N 171 TRP N CA sing N N 172 TRP N H sing N N 173 TRP N H2 sing N N 174 TRP CA C sing N N 175 TRP CA CB sing N N 176 TRP CA HA sing N N 177 TRP C O doub N N 178 TRP C OXT sing N N 179 TRP CB CG sing N N 180 TRP CB HB2 sing N N 181 TRP CB HB3 sing N N 182 TRP CG CD1 doub Y N 183 TRP CG CD2 sing Y N 184 TRP CD1 NE1 sing Y N 185 TRP CD1 HD1 sing N N 186 TRP CD2 CE2 doub Y N 187 TRP CD2 CE3 sing Y N 188 TRP NE1 CE2 sing Y N 189 TRP NE1 HE1 sing N N 190 TRP CE2 CZ2 sing Y N 191 TRP CE3 CZ3 doub Y N 192 TRP CE3 HE3 sing N N 193 TRP CZ2 CH2 doub Y N 194 TRP CZ2 HZ2 sing N N 195 TRP CZ3 CH2 sing Y N 196 TRP CZ3 HZ3 sing N N 197 TRP CH2 HH2 sing N N 198 TRP OXT HXT sing N N 199 VAL N CA sing N N 200 VAL N H sing N N 201 VAL N H2 sing N N 202 VAL CA C sing N N 203 VAL CA CB sing N N 204 VAL CA HA sing N N 205 VAL C O doub N N 206 VAL C OXT sing N N 207 VAL CB CG1 sing N N 208 VAL CB CG2 sing N N 209 VAL CB HB sing N N 210 VAL CG1 HG11 sing N N 211 VAL CG1 HG12 sing N N 212 VAL CG1 HG13 sing N N 213 VAL CG2 HG21 sing N N 214 VAL CG2 HG22 sing N N 215 VAL CG2 HG23 sing N N 216 VAL OXT HXT sing N N 217 #