data_2O2G # _entry.id 2O2G # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.365 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2O2G pdb_00002o2g 10.2210/pdb2o2g/pdb RCSB RCSB040602 ? ? WWPDB D_1000040602 ? ? # _pdbx_database_related.db_name TargetDB _pdbx_database_related.db_id 370216 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.SG_entry Y _pdbx_database_status.entry_id 2O2G _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2006-11-29 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # _audit_author.name 'Joint Center for Structural Genomics (JCSG)' _audit_author.pdbx_ordinal 1 # _citation.id primary _citation.title 'Crystal structure of Dienelactone hydrolase (YP_324580.1) from Anabaena variabilis ATCC 29413 at 1.92 A resolution' _citation.journal_abbrev 'To be published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # _citation_author.citation_id primary _citation_author.name 'Joint Center for Structural Genomics (JCSG)' _citation_author.ordinal 1 _citation_author.identifier_ORCID ? # _cell.entry_id 2O2G _cell.length_a 47.895 _cell.length_b 62.465 _cell.length_c 67.998 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 2O2G _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Dienelactone hydrolase' 24214.088 1 ? ? ? ? 2 non-polymer syn 'SULFATE ION' 96.063 2 ? ? ? ? 3 non-polymer syn 1,2-ETHANEDIOL 62.068 2 ? ? ? ? 4 water nat water 18.015 168 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;G(MSE)DRTLTHQPQEYAVSVSVGEVKLKGNLVIPNGATGIVLFAHGSGSSRYSPRNRYVAEVLQQAGLATLLIDLLTQE EEEIDLRTRHLRFDIGLLASRLVGATDWLTHNPDTQHLKVGYFGASTGGGAALVAAAERPETVQAVVSRGGRPDLAPSAL PHVKAPTLLIVGGYDLPVIA(MSE)NEDALEQLQTSKRLVIIPRASHLFEEPGALTAVAQLASEWF(MSE)HYLR ; _entity_poly.pdbx_seq_one_letter_code_can ;GMDRTLTHQPQEYAVSVSVGEVKLKGNLVIPNGATGIVLFAHGSGSSRYSPRNRYVAEVLQQAGLATLLIDLLTQEEEEI DLRTRHLRFDIGLLASRLVGATDWLTHNPDTQHLKVGYFGASTGGGAALVAAAERPETVQAVVSRGGRPDLAPSALPHVK APTLLIVGGYDLPVIAMNEDALEQLQTSKRLVIIPRASHLFEEPGALTAVAQLASEWFMHYLR ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier 370216 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 MSE n 1 3 ASP n 1 4 ARG n 1 5 THR n 1 6 LEU n 1 7 THR n 1 8 HIS n 1 9 GLN n 1 10 PRO n 1 11 GLN n 1 12 GLU n 1 13 TYR n 1 14 ALA n 1 15 VAL n 1 16 SER n 1 17 VAL n 1 18 SER n 1 19 VAL n 1 20 GLY n 1 21 GLU n 1 22 VAL n 1 23 LYS n 1 24 LEU n 1 25 LYS n 1 26 GLY n 1 27 ASN n 1 28 LEU n 1 29 VAL n 1 30 ILE n 1 31 PRO n 1 32 ASN n 1 33 GLY n 1 34 ALA n 1 35 THR n 1 36 GLY n 1 37 ILE n 1 38 VAL n 1 39 LEU n 1 40 PHE n 1 41 ALA n 1 42 HIS n 1 43 GLY n 1 44 SER n 1 45 GLY n 1 46 SER n 1 47 SER n 1 48 ARG n 1 49 TYR n 1 50 SER n 1 51 PRO n 1 52 ARG n 1 53 ASN n 1 54 ARG n 1 55 TYR n 1 56 VAL n 1 57 ALA n 1 58 GLU n 1 59 VAL n 1 60 LEU n 1 61 GLN n 1 62 GLN n 1 63 ALA n 1 64 GLY n 1 65 LEU n 1 66 ALA n 1 67 THR n 1 68 LEU n 1 69 LEU n 1 70 ILE n 1 71 ASP n 1 72 LEU n 1 73 LEU n 1 74 THR n 1 75 GLN n 1 76 GLU n 1 77 GLU n 1 78 GLU n 1 79 GLU n 1 80 ILE n 1 81 ASP n 1 82 LEU n 1 83 ARG n 1 84 THR n 1 85 ARG n 1 86 HIS n 1 87 LEU n 1 88 ARG n 1 89 PHE n 1 90 ASP n 1 91 ILE n 1 92 GLY n 1 93 LEU n 1 94 LEU n 1 95 ALA n 1 96 SER n 1 97 ARG n 1 98 LEU n 1 99 VAL n 1 100 GLY n 1 101 ALA n 1 102 THR n 1 103 ASP n 1 104 TRP n 1 105 LEU n 1 106 THR n 1 107 HIS n 1 108 ASN n 1 109 PRO n 1 110 ASP n 1 111 THR n 1 112 GLN n 1 113 HIS n 1 114 LEU n 1 115 LYS n 1 116 VAL n 1 117 GLY n 1 118 TYR n 1 119 PHE n 1 120 GLY n 1 121 ALA n 1 122 SER n 1 123 THR n 1 124 GLY n 1 125 GLY n 1 126 GLY n 1 127 ALA n 1 128 ALA n 1 129 LEU n 1 130 VAL n 1 131 ALA n 1 132 ALA n 1 133 ALA n 1 134 GLU n 1 135 ARG n 1 136 PRO n 1 137 GLU n 1 138 THR n 1 139 VAL n 1 140 GLN n 1 141 ALA n 1 142 VAL n 1 143 VAL n 1 144 SER n 1 145 ARG n 1 146 GLY n 1 147 GLY n 1 148 ARG n 1 149 PRO n 1 150 ASP n 1 151 LEU n 1 152 ALA n 1 153 PRO n 1 154 SER n 1 155 ALA n 1 156 LEU n 1 157 PRO n 1 158 HIS n 1 159 VAL n 1 160 LYS n 1 161 ALA n 1 162 PRO n 1 163 THR n 1 164 LEU n 1 165 LEU n 1 166 ILE n 1 167 VAL n 1 168 GLY n 1 169 GLY n 1 170 TYR n 1 171 ASP n 1 172 LEU n 1 173 PRO n 1 174 VAL n 1 175 ILE n 1 176 ALA n 1 177 MSE n 1 178 ASN n 1 179 GLU n 1 180 ASP n 1 181 ALA n 1 182 LEU n 1 183 GLU n 1 184 GLN n 1 185 LEU n 1 186 GLN n 1 187 THR n 1 188 SER n 1 189 LYS n 1 190 ARG n 1 191 LEU n 1 192 VAL n 1 193 ILE n 1 194 ILE n 1 195 PRO n 1 196 ARG n 1 197 ALA n 1 198 SER n 1 199 HIS n 1 200 LEU n 1 201 PHE n 1 202 GLU n 1 203 GLU n 1 204 PRO n 1 205 GLY n 1 206 ALA n 1 207 LEU n 1 208 THR n 1 209 ALA n 1 210 VAL n 1 211 ALA n 1 212 GLN n 1 213 LEU n 1 214 ALA n 1 215 SER n 1 216 GLU n 1 217 TRP n 1 218 PHE n 1 219 MSE n 1 220 HIS n 1 221 TYR n 1 222 LEU n 1 223 ARG n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus Anabaena _entity_src_gen.pdbx_gene_src_gene YP_324580.1 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Anabaena variabilis' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 1172 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type Plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q3M5Q1_ANAVT _struct_ref.pdbx_db_accession Q3M5Q1 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MDRTLTHQPQEYAVSVSVGEVKLKGNLVIPNGATGIVLFAHGSGSSRYSPRNRYVAEVLQQAGLATLLIDLLTQEEEEID LRTRHLRFDIGLLASRLVGATDWLTHNPDTQHLKVGYFGASTGGGAALVAAAERPETVQAVVSRGGRPDLAPSALPHVKA PTLLIVGGYDLPVIAMNEDALEQLQTSKRLVIIPRASHLFEEPGALTAVAQLASEWFMHYLR ; _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 2O2G _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 2 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 223 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q3M5Q1 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 222 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 222 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 2O2G GLY A 1 ? UNP Q3M5Q1 ? ? 'expression tag' 0 1 1 2O2G MSE A 2 ? UNP Q3M5Q1 MET 1 'modified residue' 1 2 1 2O2G MSE A 177 ? UNP Q3M5Q1 MET 176 'modified residue' 176 3 1 2O2G MSE A 219 ? UNP Q3M5Q1 MET 218 'modified residue' 218 4 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 EDO non-polymer . 1,2-ETHANEDIOL 'ETHYLENE GLYCOL' 'C2 H6 O2' 62.068 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 SO4 non-polymer . 'SULFATE ION' ? 'O4 S -2' 96.063 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.crystals_number 1 _exptl.method 'X-RAY DIFFRACTION' _exptl.entry_id 2O2G # _exptl_crystal.id 1 _exptl_crystal.density_Matthews 2.10 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 41.41 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP, NANODROP' _exptl_crystal_grow.pH 9.5 _exptl_crystal_grow.temp 277 _exptl_crystal_grow.pdbx_details '1.26M (NH4)2SO4, 0.2M NaCl, 0.1M CHES pH 9.5, VAPOR DIFFUSION, SITTING DROP, NANODROP, temperature 277K' _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'MARMOSAIC 300 mm CCD' _diffrn_detector.details 'Adjustable focusing mirrors in K-B geometry' _diffrn_detector.pdbx_collection_date 2006-10-19 # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Si(111) Double Crystal Monochromator' _diffrn_radiation.pdbx_diffrn_protocol MAD _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_scattering_type x-ray # loop_ _diffrn_radiation_wavelength.id _diffrn_radiation_wavelength.wavelength _diffrn_radiation_wavelength.wt 1 0.94645 1.0 2 0.97942 1.0 3 0.97921 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.pdbx_synchrotron_beamline 23-ID-D _diffrn_source.type 'APS BEAMLINE 23-ID-D' _diffrn_source.pdbx_wavelength_list '0.94645, 0.97942, 0.97921' _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_site APS # _reflns.entry_id 2O2G _reflns.d_resolution_high 1.920 _reflns.d_resolution_low 39.163 _reflns.number_obs 14877 _reflns.pdbx_Rmerge_I_obs 0.07 _reflns.pdbx_netI_over_sigmaI 9.600 _reflns.pdbx_chi_squared 1.068 _reflns.pdbx_redundancy 3.900 _reflns.percent_possible_obs 92.000 _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.number_all ? _reflns.pdbx_Rsym_value ? _reflns.B_iso_Wilson_estimate 20.056 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.number_measured_obs _reflns_shell.number_measured_all _reflns_shell.number_unique_obs _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_redundancy _reflns_shell.percent_possible_obs _reflns_shell.number_unique_all _reflns_shell.percent_possible_all _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id 1.92 1.99 ? ? ? 0.275 2.857 ? 0.936 2.60 ? 1273 81.00 1 1 1.99 2.07 ? ? ? 0.236 ? ? 0.932 3.20 ? 1454 91.90 2 1 2.07 2.16 ? ? ? 0.215 ? ? 0.957 3.70 ? 1552 98.10 3 1 2.16 2.28 ? ? ? 0.186 ? ? 1.121 3.90 ? 1042 65.40 4 1 2.28 2.42 ? ? ? 0.157 ? ? 0.976 4.20 ? 1604 99.90 5 1 2.42 2.61 ? ? ? 0.117 ? ? 1.033 4.20 ? 1597 99.80 6 1 2.61 2.87 ? ? ? 0.094 ? ? 1.186 4.30 ? 1601 99.80 7 1 2.87 3.28 ? ? ? 0.06 ? ? 1.110 4.20 ? 1628 99.70 8 1 3.28 4.14 ? ? ? 0.05 ? ? 1.174 4.10 ? 1413 86.00 9 1 4.14 50.00 ? ? ? 0.035 ? ? 1.139 4.00 ? 1713 97.40 10 1 # _refine.entry_id 2O2G _refine.ls_d_res_high 1.920 _refine.ls_d_res_low 39.163 _refine.pdbx_ls_sigma_F 0.00 _refine.ls_percent_reflns_obs 91.850 _refine.ls_number_reflns_obs 14828 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details RANDOM _refine.details ;1. HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS. 2. ATOM RECORD CONTAINS RESIDUAL B FACTORS ONLY. 3. A MET-INHIBITION PROTOCOL WAS USED FOR SELENOMETHIONINE INCORPORATION DURING PROTEIN EXPRESSION. THE OCCUPANCY OF THE SE ATOMS IN THE MSE RESIDUES WAS REDUCED TO 0.70 TO ACCOUNT FOR THE REDUCED SCATTERING POWER DUE TO PARTIAL S-MET INCORPORATION. 4. TWO SULFATE MOLECULES FROM CRYSTALLIZATION SOLUTION AND TWO ETHYLENE GLYCOL MOLECULES (CRYOPROTECTANT) ARE INCLUDED IN THE MODEL. 5. ELECTRON DENSITY CORRESPONDING TO RESIDUES 1-6 WAS DISORDERED AND THESE RESIDUES WERE NOT MODELED. ; _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.183 _refine.ls_R_factor_R_free 0.238 _refine.ls_percent_reflns_R_free 5.000 _refine.ls_number_reflns_R_free 740 _refine.B_iso_mean 26.006 _refine.aniso_B[1][1] 2.740 _refine.aniso_B[2][2] -1.240 _refine.aniso_B[3][3] -1.500 _refine.aniso_B[1][2] 0.000 _refine.aniso_B[1][3] 0.000 _refine.aniso_B[2][3] 0.000 _refine.correlation_coeff_Fo_to_Fc 0.953 _refine.correlation_coeff_Fo_to_Fc_free 0.922 _refine.pdbx_overall_ESU_R 0.190 _refine.pdbx_overall_ESU_R_Free 0.172 _refine.overall_SU_ML 0.138 _refine.overall_SU_B 9.103 _refine.solvent_model_details 'BABINET MODEL WITH MASK' _refine.pdbx_solvent_vdw_probe_radii 1.200 _refine.pdbx_solvent_ion_probe_radii 0.800 _refine.pdbx_solvent_shrinkage_radii 0.800 _refine.pdbx_method_to_determine_struct MAD _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD WITH PHASES' _refine.pdbx_ls_sigma_I ? _refine.ls_number_reflns_all ? _refine.ls_R_factor_obs 0.186 _refine.ls_redundancy_reflns_obs ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_starting_model ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.pdbx_isotropic_thermal_model ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag 'LIKELY RESIDUAL' _refine.pdbx_diffrn_id 1 _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1612 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 18 _refine_hist.number_atoms_solvent 168 _refine_hist.number_atoms_total 1798 _refine_hist.d_res_high 1.920 _refine_hist.d_res_low 39.163 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 1688 0.015 0.022 ? 'X-RAY DIFFRACTION' ? r_bond_other_d 1576 0.002 0.020 ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 2308 1.688 1.977 ? 'X-RAY DIFFRACTION' ? r_angle_other_deg 3644 0.917 3.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 225 3.660 5.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 68 31.827 23.824 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 261 10.201 15.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 11 15.158 15.000 ? 'X-RAY DIFFRACTION' ? r_chiral_restr 269 0.092 0.200 ? 'X-RAY DIFFRACTION' ? r_gen_planes_refined 1904 0.006 0.020 ? 'X-RAY DIFFRACTION' ? r_gen_planes_other 325 0.002 0.020 ? 'X-RAY DIFFRACTION' ? r_nbd_refined 343 0.214 0.300 ? 'X-RAY DIFFRACTION' ? r_nbd_other 1619 0.167 0.300 ? 'X-RAY DIFFRACTION' ? r_nbtor_refined 808 0.175 0.500 ? 'X-RAY DIFFRACTION' ? r_nbtor_other 1012 0.083 0.500 ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 216 0.197 0.500 ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 7 0.103 0.300 ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other 58 0.226 0.300 ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 16 0.143 0.500 ? 'X-RAY DIFFRACTION' ? r_mcbond_it 1110 2.115 3.000 ? 'X-RAY DIFFRACTION' ? r_mcbond_other 446 0.620 3.000 ? 'X-RAY DIFFRACTION' ? r_mcangle_it 1745 2.977 5.000 ? 'X-RAY DIFFRACTION' ? r_scbond_it 640 5.410 8.000 ? 'X-RAY DIFFRACTION' ? r_scangle_it 558 6.990 11.000 ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.d_res_high 1.920 _refine_ls_shell.d_res_low 1.969 _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.percent_reflns_obs 77.630 _refine_ls_shell.number_reflns_R_work 849 _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_R_work 0.252 _refine_ls_shell.R_factor_R_free 0.345 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 50 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.number_reflns_all ? _refine_ls_shell.number_reflns_obs 899 _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 2O2G _struct.title 'Crystal structure of Dienelactone hydrolase (YP_324580.1) from Anabaena variabilis ATCC 29413 at 1.92 A resolution' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.text ;YP_324580.1, Dienelactone hydrolase, Structural Genomics, Joint Center for Structural Genomics, JCSG, Protein Structure Initiative, PSI-2, HYDROLASE ; _struct_keywords.pdbx_keywords HYDROLASE _struct_keywords.entry_id 2O2G # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 2 ? D N N 3 ? E N N 3 ? F N N 4 ? # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 SER A 50 ? ALA A 63 ? SER A 49 ALA A 62 1 ? 14 HELX_P HELX_P2 2 THR A 74 ? ARG A 85 ? THR A 73 ARG A 84 1 ? 12 HELX_P HELX_P3 3 ASP A 90 ? ASN A 108 ? ASP A 89 ASN A 107 1 ? 19 HELX_P HELX_P4 4 SER A 122 ? ARG A 135 ? SER A 121 ARG A 134 1 ? 14 HELX_P HELX_P5 5 ARG A 148 ? ALA A 152 ? ARG A 147 ALA A 151 5 ? 5 HELX_P HELX_P6 6 ALA A 155 ? VAL A 159 ? ALA A 154 VAL A 158 5 ? 5 HELX_P HELX_P7 7 ASP A 171 ? LEU A 185 ? ASP A 170 LEU A 184 1 ? 15 HELX_P HELX_P8 8 GLY A 205 ? LEU A 222 ? GLY A 204 LEU A 221 1 ? 18 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A ALA 176 C ? ? ? 1_555 A MSE 177 N ? ? A ALA 175 A MSE 176 1_555 ? ? ? ? ? ? ? 1.332 ? ? covale2 covale both ? A MSE 177 C ? ? ? 1_555 A ASN 178 N ? ? A MSE 176 A ASN 177 1_555 ? ? ? ? ? ? ? 1.337 ? ? covale3 covale both ? A PHE 218 C ? ? ? 1_555 A MSE 219 N ? ? A PHE 217 A MSE 218 1_555 ? ? ? ? ? ? ? 1.333 ? ? covale4 covale both ? A MSE 219 C ? ? ? 1_555 A HIS 220 N ? ? A MSE 218 A HIS 219 1_555 ? ? ? ? ? ? ? 1.313 ? ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 8 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? parallel A 4 5 ? parallel A 5 6 ? parallel A 6 7 ? parallel A 7 8 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 GLU A 12 ? VAL A 19 ? GLU A 11 VAL A 18 A 2 VAL A 22 ? VAL A 29 ? VAL A 21 VAL A 28 A 3 ALA A 66 ? ILE A 70 ? ALA A 65 ILE A 69 A 4 GLY A 36 ? ALA A 41 ? GLY A 35 ALA A 40 A 5 LYS A 115 ? ALA A 121 ? LYS A 114 ALA A 120 A 6 VAL A 139 ? ARG A 145 ? VAL A 138 ARG A 144 A 7 THR A 163 ? GLY A 168 ? THR A 162 GLY A 167 A 8 LYS A 189 ? ILE A 194 ? LYS A 188 ILE A 193 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N VAL A 19 ? N VAL A 18 O VAL A 22 ? O VAL A 21 A 2 3 N ASN A 27 ? N ASN A 26 O LEU A 69 ? O LEU A 68 A 3 4 O ALA A 66 ? O ALA A 65 N GLY A 36 ? N GLY A 35 A 4 5 N LEU A 39 ? N LEU A 38 O GLY A 117 ? O GLY A 116 A 5 6 N VAL A 116 ? N VAL A 115 O GLN A 140 ? O GLN A 139 A 6 7 N SER A 144 ? N SER A 143 O ILE A 166 ? O ILE A 165 A 7 8 N LEU A 165 ? N LEU A 164 O ARG A 190 ? O ARG A 189 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A SO4 223 ? 9 'BINDING SITE FOR RESIDUE SO4 A 223' AC2 Software A SO4 224 ? 5 'BINDING SITE FOR RESIDUE SO4 A 224' AC3 Software A EDO 225 ? 5 'BINDING SITE FOR RESIDUE EDO A 225' AC4 Software A EDO 226 ? 2 'BINDING SITE FOR RESIDUE EDO A 226' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 9 HIS A 42 ? HIS A 41 . ? 1_555 ? 2 AC1 9 GLY A 43 ? GLY A 42 . ? 1_555 ? 3 AC1 9 SER A 46 ? SER A 45 . ? 1_555 ? 4 AC1 9 SER A 50 ? SER A 49 . ? 1_555 ? 5 AC1 9 ARG A 52 ? ARG A 51 . ? 1_555 ? 6 AC1 9 ASN A 53 ? ASN A 52 . ? 1_555 ? 7 AC1 9 ALA A 121 ? ALA A 120 . ? 1_555 ? 8 AC1 9 ARG A 145 ? ARG A 144 . ? 1_555 ? 9 AC1 9 HOH F . ? HOH A 355 . ? 1_555 ? 10 AC2 5 GLU A 134 ? GLU A 133 . ? 1_555 ? 11 AC2 5 ARG A 135 ? ARG A 134 . ? 1_555 ? 12 AC2 5 PRO A 136 ? PRO A 135 . ? 1_555 ? 13 AC2 5 GLU A 137 ? GLU A 136 . ? 1_555 ? 14 AC2 5 THR A 138 ? THR A 137 . ? 1_555 ? 15 AC3 5 ALA A 14 ? ALA A 13 . ? 1_555 ? 16 AC3 5 VAL A 15 ? VAL A 14 . ? 1_555 ? 17 AC3 5 LYS A 25 ? LYS A 24 . ? 1_555 ? 18 AC3 5 GLY A 26 ? GLY A 25 . ? 1_555 ? 19 AC3 5 ARG A 48 ? ARG A 47 . ? 1_555 ? 20 AC4 2 TRP A 217 ? TRP A 216 . ? 3_645 ? 21 AC4 2 HIS A 220 ? HIS A 219 . ? 3_645 ? # _atom_sites.entry_id 2O2G _atom_sites.fract_transf_matrix[1][1] 0.020879 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.016009 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.014706 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 0 ? ? ? A . n A 1 2 MSE 2 1 ? ? ? A . n A 1 3 ASP 3 2 ? ? ? A . n A 1 4 ARG 4 3 ? ? ? A . n A 1 5 THR 5 4 ? ? ? A . n A 1 6 LEU 6 5 ? ? ? A . n A 1 7 THR 7 6 ? ? ? A . n A 1 8 HIS 8 7 7 HIS HIS A . n A 1 9 GLN 9 8 8 GLN GLN A . n A 1 10 PRO 10 9 9 PRO PRO A . n A 1 11 GLN 11 10 10 GLN GLN A . n A 1 12 GLU 12 11 11 GLU GLU A . n A 1 13 TYR 13 12 12 TYR TYR A . n A 1 14 ALA 14 13 13 ALA ALA A . n A 1 15 VAL 15 14 14 VAL VAL A . n A 1 16 SER 16 15 15 SER SER A . n A 1 17 VAL 17 16 16 VAL VAL A . n A 1 18 SER 18 17 17 SER SER A . n A 1 19 VAL 19 18 18 VAL VAL A . n A 1 20 GLY 20 19 19 GLY GLY A . n A 1 21 GLU 21 20 20 GLU GLU A . n A 1 22 VAL 22 21 21 VAL VAL A . n A 1 23 LYS 23 22 22 LYS LYS A . n A 1 24 LEU 24 23 23 LEU LEU A . n A 1 25 LYS 25 24 24 LYS LYS A . n A 1 26 GLY 26 25 25 GLY GLY A . n A 1 27 ASN 27 26 26 ASN ASN A . n A 1 28 LEU 28 27 27 LEU LEU A . n A 1 29 VAL 29 28 28 VAL VAL A . n A 1 30 ILE 30 29 29 ILE ILE A . n A 1 31 PRO 31 30 30 PRO PRO A . n A 1 32 ASN 32 31 31 ASN ASN A . n A 1 33 GLY 33 32 32 GLY GLY A . n A 1 34 ALA 34 33 33 ALA ALA A . n A 1 35 THR 35 34 34 THR THR A . n A 1 36 GLY 36 35 35 GLY GLY A . n A 1 37 ILE 37 36 36 ILE ILE A . n A 1 38 VAL 38 37 37 VAL VAL A . n A 1 39 LEU 39 38 38 LEU LEU A . n A 1 40 PHE 40 39 39 PHE PHE A . n A 1 41 ALA 41 40 40 ALA ALA A . n A 1 42 HIS 42 41 41 HIS HIS A . n A 1 43 GLY 43 42 42 GLY GLY A . n A 1 44 SER 44 43 43 SER SER A . n A 1 45 GLY 45 44 44 GLY GLY A . n A 1 46 SER 46 45 45 SER SER A . n A 1 47 SER 47 46 46 SER SER A . n A 1 48 ARG 48 47 47 ARG ARG A . n A 1 49 TYR 49 48 48 TYR TYR A . n A 1 50 SER 50 49 49 SER SER A . n A 1 51 PRO 51 50 50 PRO PRO A . n A 1 52 ARG 52 51 51 ARG ARG A . n A 1 53 ASN 53 52 52 ASN ASN A . n A 1 54 ARG 54 53 53 ARG ARG A . n A 1 55 TYR 55 54 54 TYR TYR A . n A 1 56 VAL 56 55 55 VAL VAL A . n A 1 57 ALA 57 56 56 ALA ALA A . n A 1 58 GLU 58 57 57 GLU GLU A . n A 1 59 VAL 59 58 58 VAL VAL A . n A 1 60 LEU 60 59 59 LEU LEU A . n A 1 61 GLN 61 60 60 GLN GLN A . n A 1 62 GLN 62 61 61 GLN GLN A . n A 1 63 ALA 63 62 62 ALA ALA A . n A 1 64 GLY 64 63 63 GLY GLY A . n A 1 65 LEU 65 64 64 LEU LEU A . n A 1 66 ALA 66 65 65 ALA ALA A . n A 1 67 THR 67 66 66 THR THR A . n A 1 68 LEU 68 67 67 LEU LEU A . n A 1 69 LEU 69 68 68 LEU LEU A . n A 1 70 ILE 70 69 69 ILE ILE A . n A 1 71 ASP 71 70 70 ASP ASP A . n A 1 72 LEU 72 71 71 LEU LEU A . n A 1 73 LEU 73 72 72 LEU LEU A . n A 1 74 THR 74 73 73 THR THR A . n A 1 75 GLN 75 74 74 GLN GLN A . n A 1 76 GLU 76 75 75 GLU GLU A . n A 1 77 GLU 77 76 76 GLU GLU A . n A 1 78 GLU 78 77 77 GLU GLU A . n A 1 79 GLU 79 78 78 GLU GLU A . n A 1 80 ILE 80 79 79 ILE ILE A . n A 1 81 ASP 81 80 80 ASP ASP A . n A 1 82 LEU 82 81 81 LEU LEU A . n A 1 83 ARG 83 82 82 ARG ARG A . n A 1 84 THR 84 83 83 THR THR A . n A 1 85 ARG 85 84 84 ARG ARG A . n A 1 86 HIS 86 85 85 HIS HIS A . n A 1 87 LEU 87 86 86 LEU LEU A . n A 1 88 ARG 88 87 87 ARG ARG A . n A 1 89 PHE 89 88 88 PHE PHE A . n A 1 90 ASP 90 89 89 ASP ASP A . n A 1 91 ILE 91 90 90 ILE ILE A . n A 1 92 GLY 92 91 91 GLY GLY A . n A 1 93 LEU 93 92 92 LEU LEU A . n A 1 94 LEU 94 93 93 LEU LEU A . n A 1 95 ALA 95 94 94 ALA ALA A . n A 1 96 SER 96 95 95 SER SER A . n A 1 97 ARG 97 96 96 ARG ARG A . n A 1 98 LEU 98 97 97 LEU LEU A . n A 1 99 VAL 99 98 98 VAL VAL A . n A 1 100 GLY 100 99 99 GLY GLY A . n A 1 101 ALA 101 100 100 ALA ALA A . n A 1 102 THR 102 101 101 THR THR A . n A 1 103 ASP 103 102 102 ASP ASP A . n A 1 104 TRP 104 103 103 TRP TRP A . n A 1 105 LEU 105 104 104 LEU LEU A . n A 1 106 THR 106 105 105 THR THR A . n A 1 107 HIS 107 106 106 HIS HIS A . n A 1 108 ASN 108 107 107 ASN ASN A . n A 1 109 PRO 109 108 108 PRO PRO A . n A 1 110 ASP 110 109 109 ASP ASP A . n A 1 111 THR 111 110 110 THR THR A . n A 1 112 GLN 112 111 111 GLN GLN A . n A 1 113 HIS 113 112 112 HIS HIS A . n A 1 114 LEU 114 113 113 LEU LEU A . n A 1 115 LYS 115 114 114 LYS LYS A . n A 1 116 VAL 116 115 115 VAL VAL A . n A 1 117 GLY 117 116 116 GLY GLY A . n A 1 118 TYR 118 117 117 TYR TYR A . n A 1 119 PHE 119 118 118 PHE PHE A . n A 1 120 GLY 120 119 119 GLY GLY A . n A 1 121 ALA 121 120 120 ALA ALA A . n A 1 122 SER 122 121 121 SER SER A . n A 1 123 THR 123 122 122 THR THR A . n A 1 124 GLY 124 123 123 GLY GLY A . n A 1 125 GLY 125 124 124 GLY GLY A . n A 1 126 GLY 126 125 125 GLY GLY A . n A 1 127 ALA 127 126 126 ALA ALA A . n A 1 128 ALA 128 127 127 ALA ALA A . n A 1 129 LEU 129 128 128 LEU LEU A . n A 1 130 VAL 130 129 129 VAL VAL A . n A 1 131 ALA 131 130 130 ALA ALA A . n A 1 132 ALA 132 131 131 ALA ALA A . n A 1 133 ALA 133 132 132 ALA ALA A . n A 1 134 GLU 134 133 133 GLU GLU A . n A 1 135 ARG 135 134 134 ARG ARG A . n A 1 136 PRO 136 135 135 PRO PRO A . n A 1 137 GLU 137 136 136 GLU GLU A . n A 1 138 THR 138 137 137 THR THR A . n A 1 139 VAL 139 138 138 VAL VAL A . n A 1 140 GLN 140 139 139 GLN GLN A . n A 1 141 ALA 141 140 140 ALA ALA A . n A 1 142 VAL 142 141 141 VAL VAL A . n A 1 143 VAL 143 142 142 VAL VAL A . n A 1 144 SER 144 143 143 SER SER A . n A 1 145 ARG 145 144 144 ARG ARG A . n A 1 146 GLY 146 145 145 GLY GLY A . n A 1 147 GLY 147 146 146 GLY GLY A . n A 1 148 ARG 148 147 147 ARG ARG A . n A 1 149 PRO 149 148 148 PRO PRO A . n A 1 150 ASP 150 149 149 ASP ASP A . n A 1 151 LEU 151 150 150 LEU LEU A . n A 1 152 ALA 152 151 151 ALA ALA A . n A 1 153 PRO 153 152 152 PRO PRO A . n A 1 154 SER 154 153 153 SER SER A . n A 1 155 ALA 155 154 154 ALA ALA A . n A 1 156 LEU 156 155 155 LEU LEU A . n A 1 157 PRO 157 156 156 PRO PRO A . n A 1 158 HIS 158 157 157 HIS HIS A . n A 1 159 VAL 159 158 158 VAL VAL A . n A 1 160 LYS 160 159 159 LYS LYS A . n A 1 161 ALA 161 160 160 ALA ALA A . n A 1 162 PRO 162 161 161 PRO PRO A . n A 1 163 THR 163 162 162 THR THR A . n A 1 164 LEU 164 163 163 LEU LEU A . n A 1 165 LEU 165 164 164 LEU LEU A . n A 1 166 ILE 166 165 165 ILE ILE A . n A 1 167 VAL 167 166 166 VAL VAL A . n A 1 168 GLY 168 167 167 GLY GLY A . n A 1 169 GLY 169 168 168 GLY GLY A . n A 1 170 TYR 170 169 169 TYR TYR A . n A 1 171 ASP 171 170 170 ASP ASP A . n A 1 172 LEU 172 171 171 LEU LEU A . n A 1 173 PRO 173 172 172 PRO PRO A . n A 1 174 VAL 174 173 173 VAL VAL A . n A 1 175 ILE 175 174 174 ILE ILE A . n A 1 176 ALA 176 175 175 ALA ALA A . n A 1 177 MSE 177 176 176 MSE MSE A . n A 1 178 ASN 178 177 177 ASN ASN A . n A 1 179 GLU 179 178 178 GLU GLU A . n A 1 180 ASP 180 179 179 ASP ASP A . n A 1 181 ALA 181 180 180 ALA ALA A . n A 1 182 LEU 182 181 181 LEU LEU A . n A 1 183 GLU 183 182 182 GLU GLU A . n A 1 184 GLN 184 183 183 GLN GLN A . n A 1 185 LEU 185 184 184 LEU LEU A . n A 1 186 GLN 186 185 185 GLN GLN A . n A 1 187 THR 187 186 186 THR THR A . n A 1 188 SER 188 187 187 SER SER A . n A 1 189 LYS 189 188 188 LYS LYS A . n A 1 190 ARG 190 189 189 ARG ARG A . n A 1 191 LEU 191 190 190 LEU LEU A . n A 1 192 VAL 192 191 191 VAL VAL A . n A 1 193 ILE 193 192 192 ILE ILE A . n A 1 194 ILE 194 193 193 ILE ILE A . n A 1 195 PRO 195 194 194 PRO PRO A . n A 1 196 ARG 196 195 195 ARG ARG A . n A 1 197 ALA 197 196 196 ALA ALA A . n A 1 198 SER 198 197 197 SER SER A . n A 1 199 HIS 199 198 198 HIS HIS A . n A 1 200 LEU 200 199 199 LEU LEU A . n A 1 201 PHE 201 200 200 PHE PHE A . n A 1 202 GLU 202 201 201 GLU GLU A . n A 1 203 GLU 203 202 202 GLU GLU A . n A 1 204 PRO 204 203 203 PRO PRO A . n A 1 205 GLY 205 204 204 GLY GLY A . n A 1 206 ALA 206 205 205 ALA ALA A . n A 1 207 LEU 207 206 206 LEU LEU A . n A 1 208 THR 208 207 207 THR THR A . n A 1 209 ALA 209 208 208 ALA ALA A . n A 1 210 VAL 210 209 209 VAL VAL A . n A 1 211 ALA 211 210 210 ALA ALA A . n A 1 212 GLN 212 211 211 GLN GLN A . n A 1 213 LEU 213 212 212 LEU LEU A . n A 1 214 ALA 214 213 213 ALA ALA A . n A 1 215 SER 215 214 214 SER SER A . n A 1 216 GLU 216 215 215 GLU GLU A . n A 1 217 TRP 217 216 216 TRP TRP A . n A 1 218 PHE 218 217 217 PHE PHE A . n A 1 219 MSE 219 218 218 MSE MSE A . n A 1 220 HIS 220 219 219 HIS HIS A . n A 1 221 TYR 221 220 220 TYR TYR A . n A 1 222 LEU 222 221 221 LEU LEU A . n A 1 223 ARG 223 222 222 ARG ARG A . n # _pdbx_SG_project.project_name 'PSI, Protein Structure Initiative' _pdbx_SG_project.full_name_of_center 'Joint Center for Structural Genomics' _pdbx_SG_project.id 1 _pdbx_SG_project.initial_of_center JCSG # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 SO4 1 223 1 SO4 SO4 A . C 2 SO4 1 224 2 SO4 SO4 A . D 3 EDO 1 225 3 EDO EDO A . E 3 EDO 1 226 4 EDO EDO A . F 4 HOH 1 227 5 HOH HOH A . F 4 HOH 2 228 6 HOH HOH A . F 4 HOH 3 229 7 HOH HOH A . F 4 HOH 4 230 8 HOH HOH A . F 4 HOH 5 231 9 HOH HOH A . F 4 HOH 6 232 10 HOH HOH A . F 4 HOH 7 233 11 HOH HOH A . F 4 HOH 8 234 12 HOH HOH A . F 4 HOH 9 235 13 HOH HOH A . F 4 HOH 10 236 14 HOH HOH A . F 4 HOH 11 237 15 HOH HOH A . F 4 HOH 12 238 16 HOH HOH A . F 4 HOH 13 239 17 HOH HOH A . F 4 HOH 14 240 18 HOH HOH A . F 4 HOH 15 241 19 HOH HOH A . F 4 HOH 16 242 20 HOH HOH A . F 4 HOH 17 243 21 HOH HOH A . F 4 HOH 18 244 22 HOH HOH A . F 4 HOH 19 245 23 HOH HOH A . F 4 HOH 20 246 24 HOH HOH A . F 4 HOH 21 247 25 HOH HOH A . F 4 HOH 22 248 26 HOH HOH A . F 4 HOH 23 249 27 HOH HOH A . F 4 HOH 24 250 28 HOH HOH A . F 4 HOH 25 251 29 HOH HOH A . F 4 HOH 26 252 30 HOH HOH A . F 4 HOH 27 253 31 HOH HOH A . F 4 HOH 28 254 32 HOH HOH A . F 4 HOH 29 255 33 HOH HOH A . F 4 HOH 30 256 34 HOH HOH A . F 4 HOH 31 257 35 HOH HOH A . F 4 HOH 32 258 36 HOH HOH A . F 4 HOH 33 259 37 HOH HOH A . F 4 HOH 34 260 38 HOH HOH A . F 4 HOH 35 261 39 HOH HOH A . F 4 HOH 36 262 40 HOH HOH A . F 4 HOH 37 263 41 HOH HOH A . F 4 HOH 38 264 42 HOH HOH A . F 4 HOH 39 265 43 HOH HOH A . F 4 HOH 40 266 44 HOH HOH A . F 4 HOH 41 267 45 HOH HOH A . F 4 HOH 42 268 46 HOH HOH A . F 4 HOH 43 269 47 HOH HOH A . F 4 HOH 44 270 48 HOH HOH A . F 4 HOH 45 271 49 HOH HOH A . F 4 HOH 46 272 50 HOH HOH A . F 4 HOH 47 273 51 HOH HOH A . F 4 HOH 48 274 52 HOH HOH A . F 4 HOH 49 275 53 HOH HOH A . F 4 HOH 50 276 54 HOH HOH A . F 4 HOH 51 277 55 HOH HOH A . F 4 HOH 52 278 56 HOH HOH A . F 4 HOH 53 279 57 HOH HOH A . F 4 HOH 54 280 58 HOH HOH A . F 4 HOH 55 281 59 HOH HOH A . F 4 HOH 56 282 60 HOH HOH A . F 4 HOH 57 283 61 HOH HOH A . F 4 HOH 58 284 62 HOH HOH A . F 4 HOH 59 285 63 HOH HOH A . F 4 HOH 60 286 64 HOH HOH A . F 4 HOH 61 287 65 HOH HOH A . F 4 HOH 62 288 66 HOH HOH A . F 4 HOH 63 289 67 HOH HOH A . F 4 HOH 64 290 68 HOH HOH A . F 4 HOH 65 291 69 HOH HOH A . F 4 HOH 66 292 70 HOH HOH A . F 4 HOH 67 293 71 HOH HOH A . F 4 HOH 68 294 72 HOH HOH A . F 4 HOH 69 295 73 HOH HOH A . F 4 HOH 70 296 74 HOH HOH A . F 4 HOH 71 297 75 HOH HOH A . F 4 HOH 72 298 76 HOH HOH A . F 4 HOH 73 299 77 HOH HOH A . F 4 HOH 74 300 78 HOH HOH A . F 4 HOH 75 301 79 HOH HOH A . F 4 HOH 76 302 80 HOH HOH A . F 4 HOH 77 303 81 HOH HOH A . F 4 HOH 78 304 82 HOH HOH A . F 4 HOH 79 305 83 HOH HOH A . F 4 HOH 80 306 84 HOH HOH A . F 4 HOH 81 307 85 HOH HOH A . F 4 HOH 82 308 86 HOH HOH A . F 4 HOH 83 309 87 HOH HOH A . F 4 HOH 84 310 88 HOH HOH A . F 4 HOH 85 311 89 HOH HOH A . F 4 HOH 86 312 90 HOH HOH A . F 4 HOH 87 313 91 HOH HOH A . F 4 HOH 88 314 92 HOH HOH A . F 4 HOH 89 315 93 HOH HOH A . F 4 HOH 90 316 94 HOH HOH A . F 4 HOH 91 317 95 HOH HOH A . F 4 HOH 92 318 96 HOH HOH A . F 4 HOH 93 319 97 HOH HOH A . F 4 HOH 94 320 98 HOH HOH A . F 4 HOH 95 321 99 HOH HOH A . F 4 HOH 96 322 100 HOH HOH A . F 4 HOH 97 323 101 HOH HOH A . F 4 HOH 98 324 102 HOH HOH A . F 4 HOH 99 325 103 HOH HOH A . F 4 HOH 100 326 104 HOH HOH A . F 4 HOH 101 327 105 HOH HOH A . F 4 HOH 102 328 106 HOH HOH A . F 4 HOH 103 329 107 HOH HOH A . F 4 HOH 104 330 108 HOH HOH A . F 4 HOH 105 331 109 HOH HOH A . F 4 HOH 106 332 110 HOH HOH A . F 4 HOH 107 333 111 HOH HOH A . F 4 HOH 108 334 112 HOH HOH A . F 4 HOH 109 335 113 HOH HOH A . F 4 HOH 110 336 114 HOH HOH A . F 4 HOH 111 337 115 HOH HOH A . F 4 HOH 112 338 116 HOH HOH A . F 4 HOH 113 339 117 HOH HOH A . F 4 HOH 114 340 118 HOH HOH A . F 4 HOH 115 341 119 HOH HOH A . F 4 HOH 116 342 120 HOH HOH A . F 4 HOH 117 343 121 HOH HOH A . F 4 HOH 118 344 122 HOH HOH A . F 4 HOH 119 345 123 HOH HOH A . F 4 HOH 120 346 124 HOH HOH A . F 4 HOH 121 347 125 HOH HOH A . F 4 HOH 122 348 126 HOH HOH A . F 4 HOH 123 349 127 HOH HOH A . F 4 HOH 124 350 128 HOH HOH A . F 4 HOH 125 351 129 HOH HOH A . F 4 HOH 126 352 130 HOH HOH A . F 4 HOH 127 353 131 HOH HOH A . F 4 HOH 128 354 132 HOH HOH A . F 4 HOH 129 355 133 HOH HOH A . F 4 HOH 130 356 134 HOH HOH A . F 4 HOH 131 357 135 HOH HOH A . F 4 HOH 132 358 136 HOH HOH A . F 4 HOH 133 359 137 HOH HOH A . F 4 HOH 134 360 138 HOH HOH A . F 4 HOH 135 361 139 HOH HOH A . F 4 HOH 136 362 140 HOH HOH A . F 4 HOH 137 363 141 HOH HOH A . F 4 HOH 138 364 142 HOH HOH A . F 4 HOH 139 365 143 HOH HOH A . F 4 HOH 140 366 144 HOH HOH A . F 4 HOH 141 367 145 HOH HOH A . F 4 HOH 142 368 146 HOH HOH A . F 4 HOH 143 369 147 HOH HOH A . F 4 HOH 144 370 148 HOH HOH A . F 4 HOH 145 371 149 HOH HOH A . F 4 HOH 146 372 150 HOH HOH A . F 4 HOH 147 373 151 HOH HOH A . F 4 HOH 148 374 152 HOH HOH A . F 4 HOH 149 375 153 HOH HOH A . F 4 HOH 150 376 154 HOH HOH A . F 4 HOH 151 377 155 HOH HOH A . F 4 HOH 152 378 156 HOH HOH A . F 4 HOH 153 379 157 HOH HOH A . F 4 HOH 154 380 158 HOH HOH A . F 4 HOH 155 381 159 HOH HOH A . F 4 HOH 156 382 160 HOH HOH A . F 4 HOH 157 383 161 HOH HOH A . F 4 HOH 158 384 162 HOH HOH A . F 4 HOH 159 385 163 HOH HOH A . F 4 HOH 160 386 164 HOH HOH A . F 4 HOH 161 387 165 HOH HOH A . F 4 HOH 162 388 166 HOH HOH A . F 4 HOH 163 389 167 HOH HOH A . F 4 HOH 164 390 168 HOH HOH A . F 4 HOH 165 391 169 HOH HOH A . F 4 HOH 166 392 170 HOH HOH A . F 4 HOH 167 393 171 HOH HOH A . F 4 HOH 168 394 172 HOH HOH A . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 177 A MSE 176 ? MET SELENOMETHIONINE 2 A MSE 219 A MSE 218 ? MET SELENOMETHIONINE # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2006-12-19 2 'Structure model' 1 1 2008-05-01 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2017-10-18 5 'Structure model' 1 4 2023-01-25 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' Advisory 3 3 'Structure model' 'Version format compliance' 4 4 'Structure model' 'Refinement description' 5 5 'Structure model' 'Database references' 6 5 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' software 2 5 'Structure model' database_2 3 5 'Structure model' struct_conn 4 5 'Structure model' struct_ref_seq_dif 5 5 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_software.classification' 2 4 'Structure model' '_software.name' 3 5 'Structure model' '_database_2.pdbx_DOI' 4 5 'Structure model' '_database_2.pdbx_database_accession' 5 5 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 6 5 'Structure model' '_struct_ref_seq_dif.details' 7 5 'Structure model' '_struct_site.pdbx_auth_asym_id' 8 5 'Structure model' '_struct_site.pdbx_auth_comp_id' 9 5 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_refine_tls.id 1 _pdbx_refine_tls.details ? _pdbx_refine_tls.method refined _pdbx_refine_tls.origin_x 32.1491 _pdbx_refine_tls.origin_y 4.2548 _pdbx_refine_tls.origin_z 15.1916 _pdbx_refine_tls.T[1][1] -0.1706 _pdbx_refine_tls.T[2][2] -0.1423 _pdbx_refine_tls.T[3][3] -0.1384 _pdbx_refine_tls.T[1][2] -0.0084 _pdbx_refine_tls.T[1][3] 0.0055 _pdbx_refine_tls.T[2][3] 0.0063 _pdbx_refine_tls.L[1][1] 1.1062 _pdbx_refine_tls.L[2][2] 2.0487 _pdbx_refine_tls.L[3][3] 1.8003 _pdbx_refine_tls.L[1][2] -0.6773 _pdbx_refine_tls.L[1][3] 0.1588 _pdbx_refine_tls.L[2][3] 0.3537 _pdbx_refine_tls.S[1][1] -0.0565 _pdbx_refine_tls.S[2][2] 0.0985 _pdbx_refine_tls.S[3][3] -0.0420 _pdbx_refine_tls.S[1][2] -0.0549 _pdbx_refine_tls.S[1][3] -0.0105 _pdbx_refine_tls.S[2][3] 0.0002 _pdbx_refine_tls.S[2][1] 0.0035 _pdbx_refine_tls.S[3][1] -0.0339 _pdbx_refine_tls.S[3][2] 0.0407 _pdbx_refine_tls.pdbx_refine_id 'X-RAY DIFFRACTION' # _pdbx_refine_tls_group.id 1 _pdbx_refine_tls_group.refine_tls_id 1 _pdbx_refine_tls_group.beg_label_asym_id A _pdbx_refine_tls_group.beg_label_seq_id 8 _pdbx_refine_tls_group.end_label_asym_id A _pdbx_refine_tls_group.end_label_seq_id 223 _pdbx_refine_tls_group.selection ALL _pdbx_refine_tls_group.beg_auth_asym_id A _pdbx_refine_tls_group.beg_auth_seq_id 7 _pdbx_refine_tls_group.end_auth_asym_id A _pdbx_refine_tls_group.end_auth_seq_id 222 _pdbx_refine_tls_group.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls_group.selection_details ? # _phasing.method MAD # loop_ _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id _software.pdbx_ordinal MolProbity 3beta29 ? package 'D.C. & J.S. Richardson lab' molprobity@kinemage.biochem.duke.edu 'model building' http://kinemage.biochem.duke.edu/molprobity/ ? ? 1 SHELX . ? package 'George Sheldrick' gsheldr@shelx.uni-ac.gwdg.de phasing http://shelx.uni-ac.gwdg.de/SHELX/ Fortran_77 ? 2 REFMAC 5.2.0005 ? program 'Murshudov, G.N.' ccp4@dl.ac.uk refinement http://www.ccp4.ac.uk/main.html Fortran_77 ? 3 SCALEPACK . ? package 'Zbyszek Otwinowski' zbyszek@mix.swmed.edu 'data scaling' http://www.lnls.br/infra/linhasluz/denzo-hkl.htm ? ? 4 PDB_EXTRACT 2.000 'April. 3, 2006' package PDB sw-help@rcsb.rutgers.edu 'data extraction' http://pdb.rutgers.edu/software/ C++ ? 5 DENZO . ? ? ? ? 'data reduction' ? ? ? 6 SHELXD . ? ? ? ? phasing ? ? ? 7 autoSHARP . ? ? ? ? phasing ? ? ? 8 # _pdbx_database_remark.id 999 _pdbx_database_remark.text ;SEQUENCE THE CONSTRUCT WAS EXPRESSED WITH A PURIFICATION TAG MGSDKIHHHHHHENLYFQG. THE TAG WAS REMOVED WITH TEV PROTEASE LEAVING ONLY A GLYCINE (0) FOLLOWED BY THE TARGET SEQUENCE. ; # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 OE2 _pdbx_validate_close_contact.auth_asym_id_1 A _pdbx_validate_close_contact.auth_comp_id_1 GLU _pdbx_validate_close_contact.auth_seq_id_1 11 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 ND2 _pdbx_validate_close_contact.auth_asym_id_2 A _pdbx_validate_close_contact.auth_comp_id_2 ASN _pdbx_validate_close_contact.auth_seq_id_2 26 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 B _pdbx_validate_close_contact.dist 2.18 # _pdbx_validate_rmsd_angle.id 1 _pdbx_validate_rmsd_angle.PDB_model_num 1 _pdbx_validate_rmsd_angle.auth_atom_id_1 CG _pdbx_validate_rmsd_angle.auth_asym_id_1 A _pdbx_validate_rmsd_angle.auth_comp_id_1 MSE _pdbx_validate_rmsd_angle.auth_seq_id_1 176 _pdbx_validate_rmsd_angle.PDB_ins_code_1 ? _pdbx_validate_rmsd_angle.label_alt_id_1 ? _pdbx_validate_rmsd_angle.auth_atom_id_2 SE _pdbx_validate_rmsd_angle.auth_asym_id_2 A _pdbx_validate_rmsd_angle.auth_comp_id_2 MSE _pdbx_validate_rmsd_angle.auth_seq_id_2 176 _pdbx_validate_rmsd_angle.PDB_ins_code_2 ? _pdbx_validate_rmsd_angle.label_alt_id_2 ? _pdbx_validate_rmsd_angle.auth_atom_id_3 CE _pdbx_validate_rmsd_angle.auth_asym_id_3 A _pdbx_validate_rmsd_angle.auth_comp_id_3 MSE _pdbx_validate_rmsd_angle.auth_seq_id_3 176 _pdbx_validate_rmsd_angle.PDB_ins_code_3 ? _pdbx_validate_rmsd_angle.label_alt_id_3 ? _pdbx_validate_rmsd_angle.angle_value 113.45 _pdbx_validate_rmsd_angle.angle_target_value 98.90 _pdbx_validate_rmsd_angle.angle_deviation 14.55 _pdbx_validate_rmsd_angle.angle_standard_deviation 2.20 _pdbx_validate_rmsd_angle.linker_flag N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 SER A 121 ? ? 51.13 -120.10 2 1 SER A 121 ? ? 51.20 -120.27 3 1 ALA A 140 ? ? -171.48 149.79 4 1 LEU A 221 ? ? -102.39 44.65 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A HIS 7 ? CB ? A HIS 8 CB 2 1 Y 1 A HIS 7 ? CG ? A HIS 8 CG 3 1 Y 1 A HIS 7 ? ND1 ? A HIS 8 ND1 4 1 Y 1 A HIS 7 ? CD2 ? A HIS 8 CD2 5 1 Y 1 A HIS 7 ? CE1 ? A HIS 8 CE1 6 1 Y 1 A HIS 7 ? NE2 ? A HIS 8 NE2 7 1 Y 1 A GLN 8 ? CG ? A GLN 9 CG 8 1 Y 1 A GLN 8 ? CD ? A GLN 9 CD 9 1 Y 1 A GLN 8 ? OE1 ? A GLN 9 OE1 10 1 Y 1 A GLN 8 ? NE2 ? A GLN 9 NE2 11 1 Y 1 A LYS 22 ? CD ? A LYS 23 CD 12 1 Y 1 A LYS 22 ? CE ? A LYS 23 CE 13 1 Y 1 A LYS 22 ? NZ ? A LYS 23 NZ 14 1 Y 1 A GLU 78 ? CD ? A GLU 79 CD 15 1 Y 1 A GLU 78 ? OE1 ? A GLU 79 OE1 16 1 Y 1 A GLU 78 ? OE2 ? A GLU 79 OE2 17 1 Y 1 A ARG 82 ? CD ? A ARG 83 CD 18 1 Y 1 A ARG 82 ? NE ? A ARG 83 NE 19 1 Y 1 A ARG 82 ? CZ ? A ARG 83 CZ 20 1 Y 1 A ARG 82 ? NH1 ? A ARG 83 NH1 21 1 Y 1 A ARG 82 ? NH2 ? A ARG 83 NH2 22 1 Y 1 A GLU 136 ? CG ? A GLU 137 CG 23 1 Y 1 A GLU 136 ? CD ? A GLU 137 CD 24 1 Y 1 A GLU 136 ? OE1 ? A GLU 137 OE1 25 1 Y 1 A GLU 136 ? OE2 ? A GLU 137 OE2 26 1 Y 1 A LEU 171 ? CG ? A LEU 172 CG 27 1 Y 1 A LEU 171 ? CD1 ? A LEU 172 CD1 28 1 Y 1 A LEU 171 ? CD2 ? A LEU 172 CD2 29 1 Y 1 A ARG 222 ? NE ? A ARG 223 NE 30 1 Y 1 A ARG 222 ? CZ ? A ARG 223 CZ 31 1 Y 1 A ARG 222 ? NH1 ? A ARG 223 NH1 32 1 Y 1 A ARG 222 ? NH2 ? A ARG 223 NH2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 0 ? A GLY 1 2 1 Y 1 A MSE 1 ? A MSE 2 3 1 Y 1 A ASP 2 ? A ASP 3 4 1 Y 1 A ARG 3 ? A ARG 4 5 1 Y 1 A THR 4 ? A THR 5 6 1 Y 1 A LEU 5 ? A LEU 6 7 1 Y 1 A THR 6 ? A THR 7 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'SULFATE ION' SO4 3 1,2-ETHANEDIOL EDO 4 water HOH #