data_2O88 # _entry.id 2O88 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.377 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2O88 pdb_00002o88 10.2210/pdb2o88/pdb RCSB RCSB040810 ? ? WWPDB D_1000040810 ? ? # _pdbx_database_related.db_name PDB _pdbx_database_related.db_id 1BBZ _pdbx_database_related.details 'wt structure' _pdbx_database_related.content_type unspecified # _pdbx_database_status.entry_id 2O88 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2006-12-12 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # _audit_author.name 'Camara-Artigas, A.' _audit_author.pdbx_ordinal 1 # _citation.id primary _citation.title ;Crystallization by capillary counter-diffusion and structure determination of the N114A mutant of the SH3 domain of Abl tyrosine kinase complexed with a high-affinity peptide ligand. ; _citation.journal_abbrev 'Acta Crystallogr.,Sect.D' _citation.journal_volume 63 _citation.page_first 646 _citation.page_last 652 _citation.year 2007 _citation.journal_id_ASTM ABCRE6 _citation.country DK _citation.journal_id_ISSN 0907-4449 _citation.journal_id_CSD 0766 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 17452790 _citation.pdbx_database_id_DOI 10.1107/S0907444907011109 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Camara-Artigas, A.' 1 ? primary 'Palencia, A.' 2 ? primary 'Martinez, J.C.' 3 ? primary 'Luque, I.' 4 ? primary 'Gavira, J.A.' 5 ? primary 'Garcia-Ruiz, J.M.' 6 ? # _cell.length_a 48.170 _cell.length_b 50.093 _cell.length_c 56.431 _cell.angle_alpha 90.000 _cell.angle_beta 90.000 _cell.angle_gamma 90.000 _cell.entry_id 2O88 _cell.pdbx_unique_axis ? _cell.Z_PDB 8 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.entry_id 2O88 _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.Int_Tables_number 19 _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Proto-oncogene tyrosine-protein kinase ABL1' 6380.054 2 2.7.10.2 N114A 'SH3 domain, residues 64-121' ? 2 polymer syn 'P41 peptide' 1035.149 2 ? ? ? ? 3 non-polymer syn 'SULFATE ION' 96.063 2 ? ? ? ? 4 water nat water 18.015 67 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'p150, c- ABL, Abelson murine leukemia viral oncogene homolog 1' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no NLFVALYDFVASGDNTLSITKGEKLRVLGYNHNGEWCEAQTKNGQGWVPSAYITPVNS NLFVALYDFVASGDNTLSITKGEKLRVLGYNHNGEWCEAQTKNGQGWVPSAYITPVNS A,B ? 2 'polypeptide(L)' no yes '(ACE)APSYSPPPPP' XAPSYSPPPPP C,D ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ASN n 1 2 LEU n 1 3 PHE n 1 4 VAL n 1 5 ALA n 1 6 LEU n 1 7 TYR n 1 8 ASP n 1 9 PHE n 1 10 VAL n 1 11 ALA n 1 12 SER n 1 13 GLY n 1 14 ASP n 1 15 ASN n 1 16 THR n 1 17 LEU n 1 18 SER n 1 19 ILE n 1 20 THR n 1 21 LYS n 1 22 GLY n 1 23 GLU n 1 24 LYS n 1 25 LEU n 1 26 ARG n 1 27 VAL n 1 28 LEU n 1 29 GLY n 1 30 TYR n 1 31 ASN n 1 32 HIS n 1 33 ASN n 1 34 GLY n 1 35 GLU n 1 36 TRP n 1 37 CYS n 1 38 GLU n 1 39 ALA n 1 40 GLN n 1 41 THR n 1 42 LYS n 1 43 ASN n 1 44 GLY n 1 45 GLN n 1 46 GLY n 1 47 TRP n 1 48 VAL n 1 49 PRO n 1 50 SER n 1 51 ALA n 1 52 TYR n 1 53 ILE n 1 54 THR n 1 55 PRO n 1 56 VAL n 1 57 ASN n 1 58 SER n 2 1 ACE n 2 2 ALA n 2 3 PRO n 2 4 SER n 2 5 TYR n 2 6 SER n 2 7 PRO n 2 8 PRO n 2 9 PRO n 2 10 PRO n 2 11 PRO n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus Homo _entity_src_gen.pdbx_gene_src_gene 'ABL1, ABL, JTK7' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain pBAT4 _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21(DE3)' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species 'Escherichia coli' _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21 (DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _pdbx_entity_src_syn.entity_id 2 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num ? _pdbx_entity_src_syn.pdbx_end_seq_num ? _pdbx_entity_src_syn.organism_scientific 'synthetic construct' _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id 32630 _pdbx_entity_src_syn.details ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform 1 UNP ABL1_HUMAN P00519 1 NLFVALYDFVASGDNTLSITKGEKLRVLGYNHNGEWCEAQTKNGQGWVPSNYITPVNS 64 ? 2 PDB 2O88 2O88 2 ? ? ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 2O88 A 1 ? 58 ? P00519 64 ? 121 ? 64 121 2 1 2O88 B 1 ? 58 ? P00519 64 ? 121 ? 64 121 3 2 2O88 C 1 ? 11 ? 2O88 0 ? 10 ? 0 10 4 2 2O88 D 1 ? 11 ? 2O88 0 ? 10 ? 0 10 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 2O88 ALA A 51 ? UNP P00519 ASN 114 'engineered mutation' 114 1 2 2O88 ALA B 51 ? UNP P00519 ASN 114 'engineered mutation' 114 2 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ACE non-polymer . 'ACETYL GROUP' ? 'C2 H4 O' 44.053 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 SO4 non-polymer . 'SULFATE ION' ? 'O4 S -2' 96.063 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.crystals_number 1 _exptl.entry_id 2O88 _exptl.method 'X-RAY DIFFRACTION' # _exptl_crystal.id 1 _exptl_crystal.density_Matthews 2.29 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 46.36 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'Capillary counter diffusion' _exptl_crystal_grow.pH 7 _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_details 'Ammoniun sulphate, pH 7, Capillary counter diffusion, temperature 293K' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'BRUKER SMART 6000' _diffrn_detector.pdbx_collection_date 2006-02-02 _diffrn_detector.details 'Bruker Microstar micro-focus (Montel Optics)' # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.monochromator 'Bruker Microstar micro-focus (Montel Optics)' _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.54 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source 'ROTATING ANODE' _diffrn_source.type 'BRUKER AXS MICROSTAR' _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.54 _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? # _reflns.entry_id 2O88 _reflns.observed_criterion_sigma_F 0 _reflns.observed_criterion_sigma_I 0 _reflns.d_resolution_high 1.75 _reflns.d_resolution_low 50 _reflns.number_all 13236 _reflns.number_obs 13236 _reflns.percent_possible_obs 92.2 _reflns.pdbx_Rmerge_I_obs 0.0682 _reflns.pdbx_Rsym_value 0.0415 _reflns.pdbx_netI_over_sigmaI 16.43 _reflns.B_iso_Wilson_estimate 19.272 _reflns.pdbx_redundancy 5.9 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 1.75 _reflns_shell.d_res_low 1.85 _reflns_shell.percent_possible_obs ? _reflns_shell.percent_possible_all 75.8 _reflns_shell.Rmerge_I_obs 0.2453 _reflns_shell.meanI_over_sigI_obs 4.41 _reflns_shell.pdbx_Rsym_value 0.219 _reflns_shell.pdbx_redundancy 2.79 _reflns_shell.number_unique_all 1638 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 2O88 _refine.ls_d_res_high 1.75 _refine.ls_d_res_low 20.000 _refine.pdbx_ls_sigma_F 0.00 _refine.ls_percent_reflns_obs 92.180 _refine.ls_number_reflns_obs 13178 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details RANDOM _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.ls_R_factor_obs 0.171 _refine.ls_R_factor_R_work 0.169 _refine.ls_R_factor_R_free 0.213 _refine.ls_percent_reflns_R_free 4.900 _refine.ls_number_reflns_R_free 647 _refine.B_iso_mean 24.290 _refine.aniso_B[1][1] -0.170 _refine.aniso_B[2][2] -0.010 _refine.aniso_B[3][3] 0.180 _refine.aniso_B[1][2] 0.000 _refine.aniso_B[1][3] 0.000 _refine.aniso_B[2][3] 0.000 _refine.correlation_coeff_Fo_to_Fc 0.967 _refine.correlation_coeff_Fo_to_Fc_free 0.954 _refine.pdbx_overall_ESU_R 0.116 _refine.pdbx_overall_ESU_R_Free 0.117 _refine.overall_SU_ML 0.074 _refine.overall_SU_B 4.793 _refine.solvent_model_details MASK _refine.pdbx_solvent_vdw_probe_radii 1.400 _refine.pdbx_solvent_ion_probe_radii 0.800 _refine.pdbx_solvent_shrinkage_radii 0.800 _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_ls_sigma_I ? _refine.ls_number_reflns_all 12531 _refine.ls_R_factor_all ? _refine.ls_redundancy_reflns_obs ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model 'PDB ENTRY 1BBZ' _refine.pdbx_stereochem_target_val_spec_case ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.pdbx_isotropic_thermal_model ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag 'LIKELY RESIDUAL' _refine.pdbx_diffrn_id 1 _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1037 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 10 _refine_hist.number_atoms_solvent 67 _refine_hist.number_atoms_total 1114 _refine_hist.d_res_high 1.75 _refine_hist.d_res_low 20.000 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 1087 0.008 0.022 ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1497 1.744 1.977 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 134 5.543 5.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 45 33.415 25.111 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 144 14.989 15.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 2 24.692 15.000 ? 'X-RAY DIFFRACTION' ? r_chiral_restr 156 0.112 0.200 ? 'X-RAY DIFFRACTION' ? r_gen_planes_refined 858 0.009 0.020 ? 'X-RAY DIFFRACTION' ? r_nbd_refined 359 0.206 0.200 ? 'X-RAY DIFFRACTION' ? r_nbtor_refined 728 0.312 0.200 ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 38 0.193 0.200 ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 33 0.155 0.200 ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 8 0.301 0.200 ? 'X-RAY DIFFRACTION' ? r_mcbond_it 701 1.067 1.500 ? 'X-RAY DIFFRACTION' ? r_mcangle_it 1110 1.580 2.000 ? 'X-RAY DIFFRACTION' ? r_scbond_it 458 2.361 3.000 ? 'X-RAY DIFFRACTION' ? r_scangle_it 385 3.443 4.500 ? 'X-RAY DIFFRACTION' ? # loop_ _refine_ls_restr_ncs.dom_id _refine_ls_restr_ncs.pdbx_type _refine_ls_restr_ncs.pdbx_auth_asym_id _refine_ls_restr_ncs.pdbx_number _refine_ls_restr_ncs.rms_dev_position _refine_ls_restr_ncs.weight_position _refine_ls_restr_ncs.pdbx_ens_id _refine_ls_restr_ncs.pdbx_refine_id _refine_ls_restr_ncs.pdbx_ordinal _refine_ls_restr_ncs.ncs_model_details _refine_ls_restr_ncs.rms_dev_B_iso _refine_ls_restr_ncs.weight_B_iso _refine_ls_restr_ncs.pdbx_asym_id _refine_ls_restr_ncs.pdbx_rms _refine_ls_restr_ncs.pdbx_weight 1 'MEDIUM POSITIONAL' A 428 0.320 0.500 1 'X-RAY DIFFRACTION' 1 ? ? ? ? ? ? 1 'MEDIUM THERMAL' A 428 0.880 2.000 1 'X-RAY DIFFRACTION' 2 ? ? ? ? ? ? 1 'MEDIUM POSITIONAL' C 75 0.090 0.500 2 'X-RAY DIFFRACTION' 3 ? ? ? ? ? ? 1 'MEDIUM THERMAL' C 75 0.490 2.000 2 'X-RAY DIFFRACTION' 4 ? ? ? ? ? ? # _refine_ls_shell.d_res_high 1.75 _refine_ls_shell.d_res_low 1.795 _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.percent_reflns_obs 74.600 _refine_ls_shell.number_reflns_R_work 745 _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_R_work 0.206 _refine_ls_shell.R_factor_R_free 0.268 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 39 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.number_reflns_all ? _refine_ls_shell.number_reflns_obs 784 _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # loop_ _struct_ncs_dom.pdbx_ens_id _struct_ncs_dom.id _struct_ncs_dom.details 1 1 A 1 2 B 2 1 C 2 2 D # loop_ _struct_ncs_dom_lim.pdbx_ens_id _struct_ncs_dom_lim.dom_id _struct_ncs_dom_lim.pdbx_component_id _struct_ncs_dom_lim.beg_label_asym_id _struct_ncs_dom_lim.beg_label_comp_id _struct_ncs_dom_lim.beg_label_seq_id _struct_ncs_dom_lim.beg_label_alt_id _struct_ncs_dom_lim.end_label_asym_id _struct_ncs_dom_lim.end_label_comp_id _struct_ncs_dom_lim.end_label_seq_id _struct_ncs_dom_lim.end_label_alt_id _struct_ncs_dom_lim.beg_auth_asym_id _struct_ncs_dom_lim.beg_auth_comp_id _struct_ncs_dom_lim.beg_auth_seq_id _struct_ncs_dom_lim.end_auth_asym_id _struct_ncs_dom_lim.end_auth_comp_id _struct_ncs_dom_lim.end_auth_seq_id _struct_ncs_dom_lim.pdbx_refine_code _struct_ncs_dom_lim.selection_details 1 1 1 A LEU 2 . A VAL 56 . A LEU 65 A VAL 119 4 ? 1 2 1 B LEU 2 . B VAL 56 . B LEU 65 B VAL 119 4 ? 2 1 1 C ALA 2 . C PRO 11 . C ALA 1 C PRO 10 4 ? 2 2 1 D ALA 2 . D PRO 11 . D ALA 1 D PRO 10 4 ? # loop_ _struct_ncs_ens.id _struct_ncs_ens.details 1 ? 2 ? # _struct.entry_id 2O88 _struct.title ;Crystal structure of the N114A mutant of ABL-SH3 domain complexed with a designed high-affinity peptide ligand: implications for SH3-ligand interactions ; _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2O88 _struct_keywords.pdbx_keywords 'SIGNALING PROTEIN' _struct_keywords.text 'SH3 domain High affinity peptide complex, SIGNALING PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 2 ? E N N 3 ? F N N 3 ? G N N 4 ? H N N 4 ? I N N 4 ? J N N 4 ? # _struct_biol.id 1 _struct_biol.details 'The biological assembly is formed by the SH3 domain (chain A/B) complexed with the acetylated peptide p41 (chain C/D)' _struct_biol.pdbx_parent_biol_id ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? C ACE 1 C ? ? ? 1_555 C ALA 2 N ? ? C ACE 0 C ALA 1 1_555 ? ? ? ? ? ? ? 1.332 ? ? covale2 covale both ? D ACE 1 C ? ? ? 1_555 D ALA 2 N ? ? D ACE 0 D ALA 1 1_555 ? ? ? ? ? ? ? 1.329 ? ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 5 ? B ? 5 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel B 4 5 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 GLY A 44 ? PRO A 49 ? GLY A 107 PRO A 112 A 2 TRP A 36 ? THR A 41 ? TRP A 99 THR A 104 A 3 LYS A 24 ? TYR A 30 ? LYS A 87 TYR A 93 A 4 LEU A 2 ? ALA A 5 ? LEU A 65 ALA A 68 A 5 ILE A 53 ? PRO A 55 ? ILE A 116 PRO A 118 B 1 GLY B 44 ? PRO B 49 ? GLY B 107 PRO B 112 B 2 TRP B 36 ? THR B 41 ? TRP B 99 THR B 104 B 3 LYS B 24 ? TYR B 30 ? LYS B 87 TYR B 93 B 4 PHE B 3 ? ALA B 5 ? PHE B 66 ALA B 68 B 5 ILE B 53 ? PRO B 55 ? ILE B 116 PRO B 118 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O VAL A 48 ? O VAL A 111 N CYS A 37 ? N CYS A 100 A 2 3 O GLU A 38 ? O GLU A 101 N LEU A 28 ? N LEU A 91 A 3 4 O LEU A 25 ? O LEU A 88 N PHE A 3 ? N PHE A 66 A 4 5 N VAL A 4 ? N VAL A 67 O THR A 54 ? O THR A 117 B 1 2 O GLY B 46 ? O GLY B 109 N ALA B 39 ? N ALA B 102 B 2 3 O GLU B 38 ? O GLU B 101 N LEU B 28 ? N LEU B 91 B 3 4 O LEU B 25 ? O LEU B 88 N PHE B 3 ? N PHE B 66 B 4 5 N VAL B 4 ? N VAL B 67 O THR B 54 ? O THR B 117 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software B SO4 122 ? 6 'BINDING SITE FOR RESIDUE SO4 B 122' AC2 Software A SO4 122 ? 6 'BINDING SITE FOR RESIDUE SO4 A 122' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 6 ARG A 26 ? ARG A 89 . ? 1_555 ? 2 AC1 6 ASN B 31 ? ASN B 94 . ? 1_555 ? 3 AC1 6 HIS B 32 ? HIS B 95 . ? 1_555 ? 4 AC1 6 HOH H . ? HOH B 143 . ? 1_555 ? 5 AC1 6 ACE D 1 ? ACE D 0 . ? 1_555 ? 6 AC1 6 ALA D 2 ? ALA D 1 . ? 1_555 ? 7 AC2 6 ASN A 31 ? ASN A 94 . ? 1_555 ? 8 AC2 6 HIS A 32 ? HIS A 95 . ? 1_555 ? 9 AC2 6 HOH G . ? HOH A 133 . ? 1_555 ? 10 AC2 6 ARG B 26 ? ARG B 89 . ? 1_555 ? 11 AC2 6 ACE C 1 ? ACE C 0 . ? 1_555 ? 12 AC2 6 ALA C 2 ? ALA C 1 . ? 1_555 ? # _atom_sites.entry_id 2O88 _atom_sites.fract_transf_matrix[1][1] 0.020760 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.019963 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.017721 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ASN 1 64 64 ASN ASN A . n A 1 2 LEU 2 65 65 LEU LEU A . n A 1 3 PHE 3 66 66 PHE PHE A . n A 1 4 VAL 4 67 67 VAL VAL A . n A 1 5 ALA 5 68 68 ALA ALA A . n A 1 6 LEU 6 69 69 LEU LEU A . n A 1 7 TYR 7 70 70 TYR TYR A . n A 1 8 ASP 8 71 71 ASP ASP A . n A 1 9 PHE 9 72 72 PHE PHE A . n A 1 10 VAL 10 73 73 VAL VAL A . n A 1 11 ALA 11 74 74 ALA ALA A . n A 1 12 SER 12 75 75 SER SER A . n A 1 13 GLY 13 76 76 GLY GLY A . n A 1 14 ASP 14 77 77 ASP ASP A . n A 1 15 ASN 15 78 78 ASN ASN A . n A 1 16 THR 16 79 79 THR THR A . n A 1 17 LEU 17 80 80 LEU LEU A . n A 1 18 SER 18 81 81 SER SER A . n A 1 19 ILE 19 82 82 ILE ILE A . n A 1 20 THR 20 83 83 THR THR A . n A 1 21 LYS 21 84 84 LYS LYS A . n A 1 22 GLY 22 85 85 GLY GLY A . n A 1 23 GLU 23 86 86 GLU GLU A . n A 1 24 LYS 24 87 87 LYS LYS A . n A 1 25 LEU 25 88 88 LEU LEU A . n A 1 26 ARG 26 89 89 ARG ARG A . n A 1 27 VAL 27 90 90 VAL VAL A . n A 1 28 LEU 28 91 91 LEU LEU A . n A 1 29 GLY 29 92 92 GLY GLY A . n A 1 30 TYR 30 93 93 TYR TYR A . n A 1 31 ASN 31 94 94 ASN ASN A . n A 1 32 HIS 32 95 95 HIS HIS A . n A 1 33 ASN 33 96 96 ASN ASN A . n A 1 34 GLY 34 97 97 GLY GLY A . n A 1 35 GLU 35 98 98 GLU GLU A . n A 1 36 TRP 36 99 99 TRP TRP A . n A 1 37 CYS 37 100 100 CYS CYS A . n A 1 38 GLU 38 101 101 GLU GLU A . n A 1 39 ALA 39 102 102 ALA ALA A . n A 1 40 GLN 40 103 103 GLN GLN A . n A 1 41 THR 41 104 104 THR THR A . n A 1 42 LYS 42 105 105 LYS LYS A . n A 1 43 ASN 43 106 106 ASN ASN A . n A 1 44 GLY 44 107 107 GLY GLY A . n A 1 45 GLN 45 108 108 GLN GLN A . n A 1 46 GLY 46 109 109 GLY GLY A . n A 1 47 TRP 47 110 110 TRP TRP A . n A 1 48 VAL 48 111 111 VAL VAL A . n A 1 49 PRO 49 112 112 PRO PRO A . n A 1 50 SER 50 113 113 SER SER A . n A 1 51 ALA 51 114 114 ALA ALA A . n A 1 52 TYR 52 115 115 TYR TYR A . n A 1 53 ILE 53 116 116 ILE ILE A . n A 1 54 THR 54 117 117 THR THR A . n A 1 55 PRO 55 118 118 PRO PRO A . n A 1 56 VAL 56 119 119 VAL VAL A . n A 1 57 ASN 57 120 120 ASN ASN A . n A 1 58 SER 58 121 121 SER SER A . n B 1 1 ASN 1 64 64 ASN ASN B . n B 1 2 LEU 2 65 65 LEU LEU B . n B 1 3 PHE 3 66 66 PHE PHE B . n B 1 4 VAL 4 67 67 VAL VAL B . n B 1 5 ALA 5 68 68 ALA ALA B . n B 1 6 LEU 6 69 69 LEU LEU B . n B 1 7 TYR 7 70 70 TYR TYR B . n B 1 8 ASP 8 71 71 ASP ASP B . n B 1 9 PHE 9 72 72 PHE PHE B . n B 1 10 VAL 10 73 73 VAL VAL B . n B 1 11 ALA 11 74 74 ALA ALA B . n B 1 12 SER 12 75 75 SER SER B . n B 1 13 GLY 13 76 76 GLY GLY B . n B 1 14 ASP 14 77 77 ASP ASP B . n B 1 15 ASN 15 78 78 ASN ASN B . n B 1 16 THR 16 79 79 THR THR B . n B 1 17 LEU 17 80 80 LEU LEU B . n B 1 18 SER 18 81 81 SER SER B . n B 1 19 ILE 19 82 82 ILE ILE B . n B 1 20 THR 20 83 83 THR THR B . n B 1 21 LYS 21 84 84 LYS LYS B . n B 1 22 GLY 22 85 85 GLY GLY B . n B 1 23 GLU 23 86 86 GLU GLU B . n B 1 24 LYS 24 87 87 LYS LYS B . n B 1 25 LEU 25 88 88 LEU LEU B . n B 1 26 ARG 26 89 89 ARG ARG B . n B 1 27 VAL 27 90 90 VAL VAL B . n B 1 28 LEU 28 91 91 LEU LEU B . n B 1 29 GLY 29 92 92 GLY GLY B . n B 1 30 TYR 30 93 93 TYR TYR B . n B 1 31 ASN 31 94 94 ASN ASN B . n B 1 32 HIS 32 95 95 HIS HIS B . n B 1 33 ASN 33 96 96 ASN ASN B . n B 1 34 GLY 34 97 97 GLY GLY B . n B 1 35 GLU 35 98 98 GLU GLU B . n B 1 36 TRP 36 99 99 TRP TRP B . n B 1 37 CYS 37 100 100 CYS CYS B . n B 1 38 GLU 38 101 101 GLU GLU B . n B 1 39 ALA 39 102 102 ALA ALA B . n B 1 40 GLN 40 103 103 GLN GLN B . n B 1 41 THR 41 104 104 THR THR B . n B 1 42 LYS 42 105 105 LYS LYS B . n B 1 43 ASN 43 106 106 ASN ASN B . n B 1 44 GLY 44 107 107 GLY GLY B . n B 1 45 GLN 45 108 108 GLN GLN B . n B 1 46 GLY 46 109 109 GLY GLY B . n B 1 47 TRP 47 110 110 TRP TRP B . n B 1 48 VAL 48 111 111 VAL VAL B . n B 1 49 PRO 49 112 112 PRO PRO B . n B 1 50 SER 50 113 113 SER SER B . n B 1 51 ALA 51 114 114 ALA ALA B . n B 1 52 TYR 52 115 115 TYR TYR B . n B 1 53 ILE 53 116 116 ILE ILE B . n B 1 54 THR 54 117 117 THR THR B . n B 1 55 PRO 55 118 118 PRO PRO B . n B 1 56 VAL 56 119 119 VAL VAL B . n B 1 57 ASN 57 120 ? ? ? B . n B 1 58 SER 58 121 ? ? ? B . n C 2 1 ACE 1 0 0 ACE ACE C . n C 2 2 ALA 2 1 1 ALA ALA C . n C 2 3 PRO 3 2 2 PRO PRO C . n C 2 4 SER 4 3 3 SER SER C . n C 2 5 TYR 5 4 4 TYR TYR C . n C 2 6 SER 6 5 5 SER SER C . n C 2 7 PRO 7 6 6 PRO PRO C . n C 2 8 PRO 8 7 7 PRO PRO C . n C 2 9 PRO 9 8 8 PRO PRO C . n C 2 10 PRO 10 9 9 PRO PRO C . n C 2 11 PRO 11 10 10 PRO PRO C . n D 2 1 ACE 1 0 0 ACE ACE D . n D 2 2 ALA 2 1 1 ALA ALA D . n D 2 3 PRO 3 2 2 PRO PRO D . n D 2 4 SER 4 3 3 SER SER D . n D 2 5 TYR 5 4 4 TYR TYR D . n D 2 6 SER 6 5 5 SER SER D . n D 2 7 PRO 7 6 6 PRO PRO D . n D 2 8 PRO 8 7 7 PRO PRO D . n D 2 9 PRO 9 8 8 PRO PRO D . n D 2 10 PRO 10 9 9 PRO PRO D . n D 2 11 PRO 11 10 10 PRO PRO D . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 SO4 1 122 2 SO4 SO4 A . F 3 SO4 1 122 1 SO4 SO4 B . G 4 HOH 1 123 1 HOH HOH A . G 4 HOH 2 124 4 HOH HOH A . G 4 HOH 3 125 11 HOH HOH A . G 4 HOH 4 126 13 HOH HOH A . G 4 HOH 5 127 16 HOH HOH A . G 4 HOH 6 128 18 HOH HOH A . G 4 HOH 7 129 20 HOH HOH A . G 4 HOH 8 130 23 HOH HOH A . G 4 HOH 9 131 24 HOH HOH A . G 4 HOH 10 132 25 HOH HOH A . G 4 HOH 11 133 29 HOH HOH A . G 4 HOH 12 134 34 HOH HOH A . G 4 HOH 13 135 36 HOH HOH A . G 4 HOH 14 136 39 HOH HOH A . G 4 HOH 15 137 42 HOH HOH A . G 4 HOH 16 138 43 HOH HOH A . G 4 HOH 17 139 47 HOH HOH A . G 4 HOH 18 140 49 HOH HOH A . G 4 HOH 19 141 50 HOH HOH A . G 4 HOH 20 142 51 HOH HOH A . G 4 HOH 21 143 52 HOH HOH A . G 4 HOH 22 144 58 HOH HOH A . G 4 HOH 23 145 59 HOH HOH A . G 4 HOH 24 146 64 HOH HOH A . H 4 HOH 1 123 2 HOH HOH B . H 4 HOH 2 124 3 HOH HOH B . H 4 HOH 3 125 5 HOH HOH B . H 4 HOH 4 126 7 HOH HOH B . H 4 HOH 5 127 10 HOH HOH B . H 4 HOH 6 128 12 HOH HOH B . H 4 HOH 7 129 14 HOH HOH B . H 4 HOH 8 130 17 HOH HOH B . H 4 HOH 9 131 19 HOH HOH B . H 4 HOH 10 132 21 HOH HOH B . H 4 HOH 11 133 26 HOH HOH B . H 4 HOH 12 134 27 HOH HOH B . H 4 HOH 13 135 28 HOH HOH B . H 4 HOH 14 136 31 HOH HOH B . H 4 HOH 15 137 33 HOH HOH B . H 4 HOH 16 138 35 HOH HOH B . H 4 HOH 17 139 38 HOH HOH B . H 4 HOH 18 140 40 HOH HOH B . H 4 HOH 19 141 41 HOH HOH B . H 4 HOH 20 142 44 HOH HOH B . H 4 HOH 21 143 45 HOH HOH B . H 4 HOH 22 144 46 HOH HOH B . H 4 HOH 23 145 48 HOH HOH B . H 4 HOH 24 146 53 HOH HOH B . H 4 HOH 25 147 54 HOH HOH B . H 4 HOH 26 148 56 HOH HOH B . H 4 HOH 27 149 57 HOH HOH B . H 4 HOH 28 150 60 HOH HOH B . H 4 HOH 29 151 61 HOH HOH B . H 4 HOH 30 152 62 HOH HOH B . H 4 HOH 31 153 65 HOH HOH B . H 4 HOH 32 154 66 HOH HOH B . H 4 HOH 33 155 67 HOH HOH B . I 4 HOH 1 11 8 HOH HOH C . I 4 HOH 2 12 9 HOH HOH C . I 4 HOH 3 13 15 HOH HOH C . I 4 HOH 4 14 22 HOH HOH C . I 4 HOH 5 15 55 HOH HOH C . I 4 HOH 6 16 63 HOH HOH C . J 4 HOH 1 11 6 HOH HOH D . J 4 HOH 2 12 30 HOH HOH D . J 4 HOH 3 13 32 HOH HOH D . J 4 HOH 4 14 37 HOH HOH D . # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_and_software_defined_assembly PISA dimeric 2 2 author_and_software_defined_assembly PISA dimeric 2 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,C,E,G,I 2 1 B,D,F,H,J # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 1280 ? 1 MORE -26 ? 1 'SSA (A^2)' 4360 ? 2 'ABSA (A^2)' 1280 ? 2 MORE -26 ? 2 'SSA (A^2)' 4050 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2007-05-01 2 'Structure model' 1 1 2008-05-01 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2017-10-18 5 'Structure model' 1 4 2021-10-20 6 'Structure model' 1 5 2023-08-30 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' Advisory 3 3 'Structure model' 'Version format compliance' 4 4 'Structure model' 'Refinement description' 5 5 'Structure model' 'Data collection' 6 5 'Structure model' 'Database references' 7 5 'Structure model' 'Derived calculations' 8 5 'Structure model' 'Source and taxonomy' 9 6 'Structure model' 'Data collection' 10 6 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' software 2 5 'Structure model' database_2 3 5 'Structure model' pdbx_entity_src_syn 4 5 'Structure model' struct_biol 5 5 'Structure model' struct_conn 6 5 'Structure model' struct_ref_seq_dif 7 5 'Structure model' struct_site 8 6 'Structure model' chem_comp_atom 9 6 'Structure model' chem_comp_bond 10 6 'Structure model' pdbx_initial_refinement_model 11 6 'Structure model' struct_ncs_dom_lim # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_software.classification' 2 4 'Structure model' '_software.contact_author' 3 4 'Structure model' '_software.contact_author_email' 4 4 'Structure model' '_software.date' 5 4 'Structure model' '_software.language' 6 4 'Structure model' '_software.location' 7 4 'Structure model' '_software.name' 8 4 'Structure model' '_software.type' 9 4 'Structure model' '_software.version' 10 5 'Structure model' '_database_2.pdbx_DOI' 11 5 'Structure model' '_database_2.pdbx_database_accession' 12 5 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 13 5 'Structure model' '_struct_ref_seq_dif.details' 14 5 'Structure model' '_struct_site.pdbx_auth_asym_id' 15 5 'Structure model' '_struct_site.pdbx_auth_comp_id' 16 5 'Structure model' '_struct_site.pdbx_auth_seq_id' 17 6 'Structure model' '_struct_ncs_dom_lim.beg_auth_comp_id' 18 6 'Structure model' '_struct_ncs_dom_lim.end_auth_comp_id' # loop_ _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.pdbx_refine_id 1 ? refined -4.4397 -10.1287 13.5651 -0.0901 -0.1067 -0.2088 0.0117 0.0185 -0.0438 10.5777 15.0570 5.1912 5.4335 0.5582 1.6293 0.2108 0.0164 -0.2273 -0.0537 0.2719 -0.1308 -0.1049 -0.1648 0.0708 'X-RAY DIFFRACTION' 2 ? refined -9.2682 -14.3911 9.9087 -0.0553 -0.1371 -0.2044 0.0045 -0.0155 -0.0264 48.0224 6.9319 2.2929 10.9001 -0.5203 0.4124 -0.1179 0.1651 -0.0472 0.0138 -0.6152 -0.1188 -0.2062 0.1754 0.0346 'X-RAY DIFFRACTION' 3 ? refined -10.1293 -2.6812 12.0597 -0.0556 -0.0889 0.2230 -0.0114 0.0008 0.1056 35.5955 7.0815 22.0563 -1.1015 -22.6557 4.2454 -0.5677 0.5235 0.0441 0.1463 1.6164 1.0688 0.0141 -0.0925 0.3751 'X-RAY DIFFRACTION' 4 ? refined -16.5271 -9.6135 21.3094 -0.0118 -0.0573 -0.0345 -0.0462 0.0480 -0.0926 25.3671 10.7681 41.2818 -2.9296 6.0128 10.1890 0.4464 -0.3908 -0.0555 -1.8503 0.9096 0.8194 1.1413 -0.1489 -0.8227 'X-RAY DIFFRACTION' 5 ? refined -7.9996 -7.1671 12.2045 -0.0709 -0.1046 -0.1119 -0.0083 0.0111 0.0095 9.8850 4.0983 3.8152 4.0115 1.0048 -0.5144 -0.1035 0.3381 -0.2346 0.7569 0.6059 0.0412 -0.1611 -0.3394 0.2520 'X-RAY DIFFRACTION' 6 ? refined -27.6095 -3.5302 0.9099 -0.0941 -0.2160 -0.1377 -0.0421 -0.0106 -0.0162 12.0372 4.8029 7.1684 -3.3993 -1.4402 1.7441 0.1846 -0.2220 0.0374 0.0403 0.0348 -0.0663 0.0249 0.0141 -0.0185 'X-RAY DIFFRACTION' 7 ? refined -34.1139 -6.8420 2.5733 -0.0532 -0.0997 -0.0679 -0.0486 -0.0053 -0.0324 26.8715 1.5272 21.8163 3.9249 -5.3275 -1.4058 0.0417 -0.3299 0.2882 -0.2506 -0.5805 0.2437 0.2184 0.5753 -0.7375 'X-RAY DIFFRACTION' 8 ? refined -24.4538 -2.2689 10.6468 0.0043 -0.0930 -0.1136 0.0057 -0.0413 0.0142 17.8597 14.5382 4.7684 12.3674 -3.7376 1.8282 -0.6034 0.2853 0.3181 -0.2560 0.0842 0.0928 0.2484 -0.2949 -0.1054 'X-RAY DIFFRACTION' 9 ? refined -19.7512 4.9652 3.5082 -0.0737 -0.1112 -0.0602 -0.0463 0.0085 -0.0201 15.5422 24.1529 10.4564 -5.3586 3.7590 -0.2282 0.1257 -0.2405 0.1148 -0.1782 1.2270 -0.0016 0.1030 -0.6917 0.6493 'X-RAY DIFFRACTION' 10 ? refined -27.0019 -3.7559 4.8880 -0.0692 -0.1536 -0.1833 -0.0227 0.0063 -0.0139 7.3843 6.3706 3.6019 -3.6985 0.5729 -2.0850 0.0359 -0.1401 0.1042 -0.2128 -0.2745 0.2659 0.3101 0.1505 -0.0734 'X-RAY DIFFRACTION' 11 ? refined -12.6057 -17.4357 20.3005 -0.0397 -0.0989 -0.0641 -0.0396 -0.0004 0.0680 6.5322 10.9356 12.0380 -7.7112 6.9732 -8.6821 -0.1506 -0.3414 0.4920 -0.0100 0.1985 -0.4638 0.3946 -0.0291 0.7284 'X-RAY DIFFRACTION' 12 ? refined -23.3061 4.5074 -4.7948 -0.0110 -0.0772 -0.1117 -0.0081 0.0222 0.0568 15.6762 8.6992 7.0921 -4.2844 0.6404 -4.5179 0.2599 0.0660 -0.3259 0.2346 0.0810 0.4037 0.2140 -0.2438 -0.2469 'X-RAY DIFFRACTION' # loop_ _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.selection_details 1 1 A 1 A 11 ALL A 64 A 74 'X-RAY DIFFRACTION' ? 2 2 A 12 A 23 ALL A 75 A 86 'X-RAY DIFFRACTION' ? 3 3 A 24 A 30 ALL A 87 A 93 'X-RAY DIFFRACTION' ? 4 4 A 31 A 37 ALL A 94 A 100 'X-RAY DIFFRACTION' ? 5 5 A 38 A 58 ALL A 101 A 121 'X-RAY DIFFRACTION' ? 6 6 B 1 B 18 ALL B 64 B 81 'X-RAY DIFFRACTION' ? 7 7 B 19 B 24 ALL B 82 B 87 'X-RAY DIFFRACTION' ? 8 8 B 25 B 30 ALL B 88 B 93 'X-RAY DIFFRACTION' ? 9 9 B 31 B 38 ALL B 94 B 101 'X-RAY DIFFRACTION' ? 10 10 B 39 B 56 ALL B 102 B 119 'X-RAY DIFFRACTION' ? 11 11 C 2 C 11 ALL C 1 C 10 'X-RAY DIFFRACTION' ? 12 12 D 2 D 11 ALL D 1 D 10 'X-RAY DIFFRACTION' ? # _pdbx_phasing_MR.entry_id 2O88 _pdbx_phasing_MR.method_rotation ? _pdbx_phasing_MR.method_translation ? _pdbx_phasing_MR.model_details ? _pdbx_phasing_MR.R_factor ? _pdbx_phasing_MR.R_rigid_body ? _pdbx_phasing_MR.correlation_coeff_Fo_to_Fc ? _pdbx_phasing_MR.correlation_coeff_Io_to_Ic ? _pdbx_phasing_MR.d_res_high_rotation 1.960 _pdbx_phasing_MR.d_res_low_rotation 36.640 _pdbx_phasing_MR.d_res_high_translation 1.960 _pdbx_phasing_MR.d_res_low_translation 36.640 _pdbx_phasing_MR.packing ? _pdbx_phasing_MR.reflns_percent_rotation ? _pdbx_phasing_MR.reflns_percent_translation ? _pdbx_phasing_MR.sigma_F_rotation ? _pdbx_phasing_MR.sigma_F_translation ? _pdbx_phasing_MR.sigma_I_rotation ? _pdbx_phasing_MR.sigma_I_translation ? # loop_ _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id _software.pdbx_ordinal DENZO . ? package 'Zbyszek Otwinowski' zbyszek@mix.swmed.edu 'data reduction' http://www.lnls.br/infra/linhasluz/denzo-hkl.htm ? ? 1 SCALEPACK . ? package 'Zbyszek Otwinowski' zbyszek@mix.swmed.edu 'data scaling' http://www.lnls.br/infra/linhasluz/denzo-hkl.htm ? ? 2 MOLREP . ? other 'A. Vagin' alexei@ysbl.york.ac.uk phasing http://www.ccp4.ac.uk/dist/html/molrep.html Fortran_77 ? 3 REFMAC . ? program 'Murshudov, G.N.' ccp4@dl.ac.uk refinement http://www.ccp4.ac.uk/main.html Fortran_77 ? 4 PDB_EXTRACT 2.000 'April. 3, 2006' package PDB sw-help@rcsb.rutgers.edu 'data extraction' http://pdb.rutgers.edu/software/ C++ ? 5 'PROTEUM PLUS' PLUS ? ? ? ? 'data collection' ? ? ? 6 SAINT . ? ? ? ? 'data reduction' ? ? ? 7 # _pdbx_validate_rmsd_angle.id 1 _pdbx_validate_rmsd_angle.PDB_model_num 1 _pdbx_validate_rmsd_angle.auth_atom_id_1 CB _pdbx_validate_rmsd_angle.auth_asym_id_1 A _pdbx_validate_rmsd_angle.auth_comp_id_1 ASP _pdbx_validate_rmsd_angle.auth_seq_id_1 71 _pdbx_validate_rmsd_angle.PDB_ins_code_1 ? _pdbx_validate_rmsd_angle.label_alt_id_1 ? _pdbx_validate_rmsd_angle.auth_atom_id_2 CG _pdbx_validate_rmsd_angle.auth_asym_id_2 A _pdbx_validate_rmsd_angle.auth_comp_id_2 ASP _pdbx_validate_rmsd_angle.auth_seq_id_2 71 _pdbx_validate_rmsd_angle.PDB_ins_code_2 ? _pdbx_validate_rmsd_angle.label_alt_id_2 ? _pdbx_validate_rmsd_angle.auth_atom_id_3 OD1 _pdbx_validate_rmsd_angle.auth_asym_id_3 A _pdbx_validate_rmsd_angle.auth_comp_id_3 ASP _pdbx_validate_rmsd_angle.auth_seq_id_3 71 _pdbx_validate_rmsd_angle.PDB_ins_code_3 ? _pdbx_validate_rmsd_angle.label_alt_id_3 ? _pdbx_validate_rmsd_angle.angle_value 123.82 _pdbx_validate_rmsd_angle.angle_target_value 118.30 _pdbx_validate_rmsd_angle.angle_deviation 5.52 _pdbx_validate_rmsd_angle.angle_standard_deviation 0.90 _pdbx_validate_rmsd_angle.linker_flag N # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 B ASN 120 ? B ASN 57 2 1 Y 1 B SER 121 ? B SER 58 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ACE C C N N 1 ACE O O N N 2 ACE CH3 C N N 3 ACE H H N N 4 ACE H1 H N N 5 ACE H2 H N N 6 ACE H3 H N N 7 ALA N N N N 8 ALA CA C N S 9 ALA C C N N 10 ALA O O N N 11 ALA CB C N N 12 ALA OXT O N N 13 ALA H H N N 14 ALA H2 H N N 15 ALA HA H N N 16 ALA HB1 H N N 17 ALA HB2 H N N 18 ALA HB3 H N N 19 ALA HXT H N N 20 ARG N N N N 21 ARG CA C N S 22 ARG C C N N 23 ARG O O N N 24 ARG CB C N N 25 ARG CG C N N 26 ARG CD C N N 27 ARG NE N N N 28 ARG CZ C N N 29 ARG NH1 N N N 30 ARG NH2 N N N 31 ARG OXT O N N 32 ARG H H N N 33 ARG H2 H N N 34 ARG HA H N N 35 ARG HB2 H N N 36 ARG HB3 H N N 37 ARG HG2 H N N 38 ARG HG3 H N N 39 ARG HD2 H N N 40 ARG HD3 H N N 41 ARG HE H N N 42 ARG HH11 H N N 43 ARG HH12 H N N 44 ARG HH21 H N N 45 ARG HH22 H N N 46 ARG HXT H N N 47 ASN N N N N 48 ASN CA C N S 49 ASN C C N N 50 ASN O O N N 51 ASN CB C N N 52 ASN CG C N N 53 ASN OD1 O N N 54 ASN ND2 N N N 55 ASN OXT O N N 56 ASN H H N N 57 ASN H2 H N N 58 ASN HA H N N 59 ASN HB2 H N N 60 ASN HB3 H N N 61 ASN HD21 H N N 62 ASN HD22 H N N 63 ASN HXT H N N 64 ASP N N N N 65 ASP CA C N S 66 ASP C C N N 67 ASP O O N N 68 ASP CB C N N 69 ASP CG C N N 70 ASP OD1 O N N 71 ASP OD2 O N N 72 ASP OXT O N N 73 ASP H H N N 74 ASP H2 H N N 75 ASP HA H N N 76 ASP HB2 H N N 77 ASP HB3 H N N 78 ASP HD2 H N N 79 ASP HXT H N N 80 CYS N N N N 81 CYS CA C N R 82 CYS C C N N 83 CYS O O N N 84 CYS CB C N N 85 CYS SG S N N 86 CYS OXT O N N 87 CYS H H N N 88 CYS H2 H N N 89 CYS HA H N N 90 CYS HB2 H N N 91 CYS HB3 H N N 92 CYS HG H N N 93 CYS HXT H N N 94 GLN N N N N 95 GLN CA C N S 96 GLN C C N N 97 GLN O O N N 98 GLN CB C N N 99 GLN CG C N N 100 GLN CD C N N 101 GLN OE1 O N N 102 GLN NE2 N N N 103 GLN OXT O N N 104 GLN H H N N 105 GLN H2 H N N 106 GLN HA H N N 107 GLN HB2 H N N 108 GLN HB3 H N N 109 GLN HG2 H N N 110 GLN HG3 H N N 111 GLN HE21 H N N 112 GLN HE22 H N N 113 GLN HXT H N N 114 GLU N N N N 115 GLU CA C N S 116 GLU C C N N 117 GLU O O N N 118 GLU CB C N N 119 GLU CG C N N 120 GLU CD C N N 121 GLU OE1 O N N 122 GLU OE2 O N N 123 GLU OXT O N N 124 GLU H H N N 125 GLU H2 H N N 126 GLU HA H N N 127 GLU HB2 H N N 128 GLU HB3 H N N 129 GLU HG2 H N N 130 GLU HG3 H N N 131 GLU HE2 H N N 132 GLU HXT H N N 133 GLY N N N N 134 GLY CA C N N 135 GLY C C N N 136 GLY O O N N 137 GLY OXT O N N 138 GLY H H N N 139 GLY H2 H N N 140 GLY HA2 H N N 141 GLY HA3 H N N 142 GLY HXT H N N 143 HIS N N N N 144 HIS CA C N S 145 HIS C C N N 146 HIS O O N N 147 HIS CB C N N 148 HIS CG C Y N 149 HIS ND1 N Y N 150 HIS CD2 C Y N 151 HIS CE1 C Y N 152 HIS NE2 N Y N 153 HIS OXT O N N 154 HIS H H N N 155 HIS H2 H N N 156 HIS HA H N N 157 HIS HB2 H N N 158 HIS HB3 H N N 159 HIS HD1 H N N 160 HIS HD2 H N N 161 HIS HE1 H N N 162 HIS HE2 H N N 163 HIS HXT H N N 164 HOH O O N N 165 HOH H1 H N N 166 HOH H2 H N N 167 ILE N N N N 168 ILE CA C N S 169 ILE C C N N 170 ILE O O N N 171 ILE CB C N S 172 ILE CG1 C N N 173 ILE CG2 C N N 174 ILE CD1 C N N 175 ILE OXT O N N 176 ILE H H N N 177 ILE H2 H N N 178 ILE HA H N N 179 ILE HB H N N 180 ILE HG12 H N N 181 ILE HG13 H N N 182 ILE HG21 H N N 183 ILE HG22 H N N 184 ILE HG23 H N N 185 ILE HD11 H N N 186 ILE HD12 H N N 187 ILE HD13 H N N 188 ILE HXT H N N 189 LEU N N N N 190 LEU CA C N S 191 LEU C C N N 192 LEU O O N N 193 LEU CB C N N 194 LEU CG C N N 195 LEU CD1 C N N 196 LEU CD2 C N N 197 LEU OXT O N N 198 LEU H H N N 199 LEU H2 H N N 200 LEU HA H N N 201 LEU HB2 H N N 202 LEU HB3 H N N 203 LEU HG H N N 204 LEU HD11 H N N 205 LEU HD12 H N N 206 LEU HD13 H N N 207 LEU HD21 H N N 208 LEU HD22 H N N 209 LEU HD23 H N N 210 LEU HXT H N N 211 LYS N N N N 212 LYS CA C N S 213 LYS C C N N 214 LYS O O N N 215 LYS CB C N N 216 LYS CG C N N 217 LYS CD C N N 218 LYS CE C N N 219 LYS NZ N N N 220 LYS OXT O N N 221 LYS H H N N 222 LYS H2 H N N 223 LYS HA H N N 224 LYS HB2 H N N 225 LYS HB3 H N N 226 LYS HG2 H N N 227 LYS HG3 H N N 228 LYS HD2 H N N 229 LYS HD3 H N N 230 LYS HE2 H N N 231 LYS HE3 H N N 232 LYS HZ1 H N N 233 LYS HZ2 H N N 234 LYS HZ3 H N N 235 LYS HXT H N N 236 PHE N N N N 237 PHE CA C N S 238 PHE C C N N 239 PHE O O N N 240 PHE CB C N N 241 PHE CG C Y N 242 PHE CD1 C Y N 243 PHE CD2 C Y N 244 PHE CE1 C Y N 245 PHE CE2 C Y N 246 PHE CZ C Y N 247 PHE OXT O N N 248 PHE H H N N 249 PHE H2 H N N 250 PHE HA H N N 251 PHE HB2 H N N 252 PHE HB3 H N N 253 PHE HD1 H N N 254 PHE HD2 H N N 255 PHE HE1 H N N 256 PHE HE2 H N N 257 PHE HZ H N N 258 PHE HXT H N N 259 PRO N N N N 260 PRO CA C N S 261 PRO C C N N 262 PRO O O N N 263 PRO CB C N N 264 PRO CG C N N 265 PRO CD C N N 266 PRO OXT O N N 267 PRO H H N N 268 PRO HA H N N 269 PRO HB2 H N N 270 PRO HB3 H N N 271 PRO HG2 H N N 272 PRO HG3 H N N 273 PRO HD2 H N N 274 PRO HD3 H N N 275 PRO HXT H N N 276 SER N N N N 277 SER CA C N S 278 SER C C N N 279 SER O O N N 280 SER CB C N N 281 SER OG O N N 282 SER OXT O N N 283 SER H H N N 284 SER H2 H N N 285 SER HA H N N 286 SER HB2 H N N 287 SER HB3 H N N 288 SER HG H N N 289 SER HXT H N N 290 SO4 S S N N 291 SO4 O1 O N N 292 SO4 O2 O N N 293 SO4 O3 O N N 294 SO4 O4 O N N 295 THR N N N N 296 THR CA C N S 297 THR C C N N 298 THR O O N N 299 THR CB C N R 300 THR OG1 O N N 301 THR CG2 C N N 302 THR OXT O N N 303 THR H H N N 304 THR H2 H N N 305 THR HA H N N 306 THR HB H N N 307 THR HG1 H N N 308 THR HG21 H N N 309 THR HG22 H N N 310 THR HG23 H N N 311 THR HXT H N N 312 TRP N N N N 313 TRP CA C N S 314 TRP C C N N 315 TRP O O N N 316 TRP CB C N N 317 TRP CG C Y N 318 TRP CD1 C Y N 319 TRP CD2 C Y N 320 TRP NE1 N Y N 321 TRP CE2 C Y N 322 TRP CE3 C Y N 323 TRP CZ2 C Y N 324 TRP CZ3 C Y N 325 TRP CH2 C Y N 326 TRP OXT O N N 327 TRP H H N N 328 TRP H2 H N N 329 TRP HA H N N 330 TRP HB2 H N N 331 TRP HB3 H N N 332 TRP HD1 H N N 333 TRP HE1 H N N 334 TRP HE3 H N N 335 TRP HZ2 H N N 336 TRP HZ3 H N N 337 TRP HH2 H N N 338 TRP HXT H N N 339 TYR N N N N 340 TYR CA C N S 341 TYR C C N N 342 TYR O O N N 343 TYR CB C N N 344 TYR CG C Y N 345 TYR CD1 C Y N 346 TYR CD2 C Y N 347 TYR CE1 C Y N 348 TYR CE2 C Y N 349 TYR CZ C Y N 350 TYR OH O N N 351 TYR OXT O N N 352 TYR H H N N 353 TYR H2 H N N 354 TYR HA H N N 355 TYR HB2 H N N 356 TYR HB3 H N N 357 TYR HD1 H N N 358 TYR HD2 H N N 359 TYR HE1 H N N 360 TYR HE2 H N N 361 TYR HH H N N 362 TYR HXT H N N 363 VAL N N N N 364 VAL CA C N S 365 VAL C C N N 366 VAL O O N N 367 VAL CB C N N 368 VAL CG1 C N N 369 VAL CG2 C N N 370 VAL OXT O N N 371 VAL H H N N 372 VAL H2 H N N 373 VAL HA H N N 374 VAL HB H N N 375 VAL HG11 H N N 376 VAL HG12 H N N 377 VAL HG13 H N N 378 VAL HG21 H N N 379 VAL HG22 H N N 380 VAL HG23 H N N 381 VAL HXT H N N 382 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ACE C O doub N N 1 ACE C CH3 sing N N 2 ACE C H sing N N 3 ACE CH3 H1 sing N N 4 ACE CH3 H2 sing N N 5 ACE CH3 H3 sing N N 6 ALA N CA sing N N 7 ALA N H sing N N 8 ALA N H2 sing N N 9 ALA CA C sing N N 10 ALA CA CB sing N N 11 ALA CA HA sing N N 12 ALA C O doub N N 13 ALA C OXT sing N N 14 ALA CB HB1 sing N N 15 ALA CB HB2 sing N N 16 ALA CB HB3 sing N N 17 ALA OXT HXT sing N N 18 ARG N CA sing N N 19 ARG N H sing N N 20 ARG N H2 sing N N 21 ARG CA C sing N N 22 ARG CA CB sing N N 23 ARG CA HA sing N N 24 ARG C O doub N N 25 ARG C OXT sing N N 26 ARG CB CG sing N N 27 ARG CB HB2 sing N N 28 ARG CB HB3 sing N N 29 ARG CG CD sing N N 30 ARG CG HG2 sing N N 31 ARG CG HG3 sing N N 32 ARG CD NE sing N N 33 ARG CD HD2 sing N N 34 ARG CD HD3 sing N N 35 ARG NE CZ sing N N 36 ARG NE HE sing N N 37 ARG CZ NH1 sing N N 38 ARG CZ NH2 doub N N 39 ARG NH1 HH11 sing N N 40 ARG NH1 HH12 sing N N 41 ARG NH2 HH21 sing N N 42 ARG NH2 HH22 sing N N 43 ARG OXT HXT sing N N 44 ASN N CA sing N N 45 ASN N H sing N N 46 ASN N H2 sing N N 47 ASN CA C sing N N 48 ASN CA CB sing N N 49 ASN CA HA sing N N 50 ASN C O doub N N 51 ASN C OXT sing N N 52 ASN CB CG sing N N 53 ASN CB HB2 sing N N 54 ASN CB HB3 sing N N 55 ASN CG OD1 doub N N 56 ASN CG ND2 sing N N 57 ASN ND2 HD21 sing N N 58 ASN ND2 HD22 sing N N 59 ASN OXT HXT sing N N 60 ASP N CA sing N N 61 ASP N H sing N N 62 ASP N H2 sing N N 63 ASP CA C sing N N 64 ASP CA CB sing N N 65 ASP CA HA sing N N 66 ASP C O doub N N 67 ASP C OXT sing N N 68 ASP CB CG sing N N 69 ASP CB HB2 sing N N 70 ASP CB HB3 sing N N 71 ASP CG OD1 doub N N 72 ASP CG OD2 sing N N 73 ASP OD2 HD2 sing N N 74 ASP OXT HXT sing N N 75 CYS N CA sing N N 76 CYS N H sing N N 77 CYS N H2 sing N N 78 CYS CA C sing N N 79 CYS CA CB sing N N 80 CYS CA HA sing N N 81 CYS C O doub N N 82 CYS C OXT sing N N 83 CYS CB SG sing N N 84 CYS CB HB2 sing N N 85 CYS CB HB3 sing N N 86 CYS SG HG sing N N 87 CYS OXT HXT sing N N 88 GLN N CA sing N N 89 GLN N H sing N N 90 GLN N H2 sing N N 91 GLN CA C sing N N 92 GLN CA CB sing N N 93 GLN CA HA sing N N 94 GLN C O doub N N 95 GLN C OXT sing N N 96 GLN CB CG sing N N 97 GLN CB HB2 sing N N 98 GLN CB HB3 sing N N 99 GLN CG CD sing N N 100 GLN CG HG2 sing N N 101 GLN CG HG3 sing N N 102 GLN CD OE1 doub N N 103 GLN CD NE2 sing N N 104 GLN NE2 HE21 sing N N 105 GLN NE2 HE22 sing N N 106 GLN OXT HXT sing N N 107 GLU N CA sing N N 108 GLU N H sing N N 109 GLU N H2 sing N N 110 GLU CA C sing N N 111 GLU CA CB sing N N 112 GLU CA HA sing N N 113 GLU C O doub N N 114 GLU C OXT sing N N 115 GLU CB CG sing N N 116 GLU CB HB2 sing N N 117 GLU CB HB3 sing N N 118 GLU CG CD sing N N 119 GLU CG HG2 sing N N 120 GLU CG HG3 sing N N 121 GLU CD OE1 doub N N 122 GLU CD OE2 sing N N 123 GLU OE2 HE2 sing N N 124 GLU OXT HXT sing N N 125 GLY N CA sing N N 126 GLY N H sing N N 127 GLY N H2 sing N N 128 GLY CA C sing N N 129 GLY CA HA2 sing N N 130 GLY CA HA3 sing N N 131 GLY C O doub N N 132 GLY C OXT sing N N 133 GLY OXT HXT sing N N 134 HIS N CA sing N N 135 HIS N H sing N N 136 HIS N H2 sing N N 137 HIS CA C sing N N 138 HIS CA CB sing N N 139 HIS CA HA sing N N 140 HIS C O doub N N 141 HIS C OXT sing N N 142 HIS CB CG sing N N 143 HIS CB HB2 sing N N 144 HIS CB HB3 sing N N 145 HIS CG ND1 sing Y N 146 HIS CG CD2 doub Y N 147 HIS ND1 CE1 doub Y N 148 HIS ND1 HD1 sing N N 149 HIS CD2 NE2 sing Y N 150 HIS CD2 HD2 sing N N 151 HIS CE1 NE2 sing Y N 152 HIS CE1 HE1 sing N N 153 HIS NE2 HE2 sing N N 154 HIS OXT HXT sing N N 155 HOH O H1 sing N N 156 HOH O H2 sing N N 157 ILE N CA sing N N 158 ILE N H sing N N 159 ILE N H2 sing N N 160 ILE CA C sing N N 161 ILE CA CB sing N N 162 ILE CA HA sing N N 163 ILE C O doub N N 164 ILE C OXT sing N N 165 ILE CB CG1 sing N N 166 ILE CB CG2 sing N N 167 ILE CB HB sing N N 168 ILE CG1 CD1 sing N N 169 ILE CG1 HG12 sing N N 170 ILE CG1 HG13 sing N N 171 ILE CG2 HG21 sing N N 172 ILE CG2 HG22 sing N N 173 ILE CG2 HG23 sing N N 174 ILE CD1 HD11 sing N N 175 ILE CD1 HD12 sing N N 176 ILE CD1 HD13 sing N N 177 ILE OXT HXT sing N N 178 LEU N CA sing N N 179 LEU N H sing N N 180 LEU N H2 sing N N 181 LEU CA C sing N N 182 LEU CA CB sing N N 183 LEU CA HA sing N N 184 LEU C O doub N N 185 LEU C OXT sing N N 186 LEU CB CG sing N N 187 LEU CB HB2 sing N N 188 LEU CB HB3 sing N N 189 LEU CG CD1 sing N N 190 LEU CG CD2 sing N N 191 LEU CG HG sing N N 192 LEU CD1 HD11 sing N N 193 LEU CD1 HD12 sing N N 194 LEU CD1 HD13 sing N N 195 LEU CD2 HD21 sing N N 196 LEU CD2 HD22 sing N N 197 LEU CD2 HD23 sing N N 198 LEU OXT HXT sing N N 199 LYS N CA sing N N 200 LYS N H sing N N 201 LYS N H2 sing N N 202 LYS CA C sing N N 203 LYS CA CB sing N N 204 LYS CA HA sing N N 205 LYS C O doub N N 206 LYS C OXT sing N N 207 LYS CB CG sing N N 208 LYS CB HB2 sing N N 209 LYS CB HB3 sing N N 210 LYS CG CD sing N N 211 LYS CG HG2 sing N N 212 LYS CG HG3 sing N N 213 LYS CD CE sing N N 214 LYS CD HD2 sing N N 215 LYS CD HD3 sing N N 216 LYS CE NZ sing N N 217 LYS CE HE2 sing N N 218 LYS CE HE3 sing N N 219 LYS NZ HZ1 sing N N 220 LYS NZ HZ2 sing N N 221 LYS NZ HZ3 sing N N 222 LYS OXT HXT sing N N 223 PHE N CA sing N N 224 PHE N H sing N N 225 PHE N H2 sing N N 226 PHE CA C sing N N 227 PHE CA CB sing N N 228 PHE CA HA sing N N 229 PHE C O doub N N 230 PHE C OXT sing N N 231 PHE CB CG sing N N 232 PHE CB HB2 sing N N 233 PHE CB HB3 sing N N 234 PHE CG CD1 doub Y N 235 PHE CG CD2 sing Y N 236 PHE CD1 CE1 sing Y N 237 PHE CD1 HD1 sing N N 238 PHE CD2 CE2 doub Y N 239 PHE CD2 HD2 sing N N 240 PHE CE1 CZ doub Y N 241 PHE CE1 HE1 sing N N 242 PHE CE2 CZ sing Y N 243 PHE CE2 HE2 sing N N 244 PHE CZ HZ sing N N 245 PHE OXT HXT sing N N 246 PRO N CA sing N N 247 PRO N CD sing N N 248 PRO N H sing N N 249 PRO CA C sing N N 250 PRO CA CB sing N N 251 PRO CA HA sing N N 252 PRO C O doub N N 253 PRO C OXT sing N N 254 PRO CB CG sing N N 255 PRO CB HB2 sing N N 256 PRO CB HB3 sing N N 257 PRO CG CD sing N N 258 PRO CG HG2 sing N N 259 PRO CG HG3 sing N N 260 PRO CD HD2 sing N N 261 PRO CD HD3 sing N N 262 PRO OXT HXT sing N N 263 SER N CA sing N N 264 SER N H sing N N 265 SER N H2 sing N N 266 SER CA C sing N N 267 SER CA CB sing N N 268 SER CA HA sing N N 269 SER C O doub N N 270 SER C OXT sing N N 271 SER CB OG sing N N 272 SER CB HB2 sing N N 273 SER CB HB3 sing N N 274 SER OG HG sing N N 275 SER OXT HXT sing N N 276 SO4 S O1 doub N N 277 SO4 S O2 doub N N 278 SO4 S O3 sing N N 279 SO4 S O4 sing N N 280 THR N CA sing N N 281 THR N H sing N N 282 THR N H2 sing N N 283 THR CA C sing N N 284 THR CA CB sing N N 285 THR CA HA sing N N 286 THR C O doub N N 287 THR C OXT sing N N 288 THR CB OG1 sing N N 289 THR CB CG2 sing N N 290 THR CB HB sing N N 291 THR OG1 HG1 sing N N 292 THR CG2 HG21 sing N N 293 THR CG2 HG22 sing N N 294 THR CG2 HG23 sing N N 295 THR OXT HXT sing N N 296 TRP N CA sing N N 297 TRP N H sing N N 298 TRP N H2 sing N N 299 TRP CA C sing N N 300 TRP CA CB sing N N 301 TRP CA HA sing N N 302 TRP C O doub N N 303 TRP C OXT sing N N 304 TRP CB CG sing N N 305 TRP CB HB2 sing N N 306 TRP CB HB3 sing N N 307 TRP CG CD1 doub Y N 308 TRP CG CD2 sing Y N 309 TRP CD1 NE1 sing Y N 310 TRP CD1 HD1 sing N N 311 TRP CD2 CE2 doub Y N 312 TRP CD2 CE3 sing Y N 313 TRP NE1 CE2 sing Y N 314 TRP NE1 HE1 sing N N 315 TRP CE2 CZ2 sing Y N 316 TRP CE3 CZ3 doub Y N 317 TRP CE3 HE3 sing N N 318 TRP CZ2 CH2 doub Y N 319 TRP CZ2 HZ2 sing N N 320 TRP CZ3 CH2 sing Y N 321 TRP CZ3 HZ3 sing N N 322 TRP CH2 HH2 sing N N 323 TRP OXT HXT sing N N 324 TYR N CA sing N N 325 TYR N H sing N N 326 TYR N H2 sing N N 327 TYR CA C sing N N 328 TYR CA CB sing N N 329 TYR CA HA sing N N 330 TYR C O doub N N 331 TYR C OXT sing N N 332 TYR CB CG sing N N 333 TYR CB HB2 sing N N 334 TYR CB HB3 sing N N 335 TYR CG CD1 doub Y N 336 TYR CG CD2 sing Y N 337 TYR CD1 CE1 sing Y N 338 TYR CD1 HD1 sing N N 339 TYR CD2 CE2 doub Y N 340 TYR CD2 HD2 sing N N 341 TYR CE1 CZ doub Y N 342 TYR CE1 HE1 sing N N 343 TYR CE2 CZ sing Y N 344 TYR CE2 HE2 sing N N 345 TYR CZ OH sing N N 346 TYR OH HH sing N N 347 TYR OXT HXT sing N N 348 VAL N CA sing N N 349 VAL N H sing N N 350 VAL N H2 sing N N 351 VAL CA C sing N N 352 VAL CA CB sing N N 353 VAL CA HA sing N N 354 VAL C O doub N N 355 VAL C OXT sing N N 356 VAL CB CG1 sing N N 357 VAL CB CG2 sing N N 358 VAL CB HB sing N N 359 VAL CG1 HG11 sing N N 360 VAL CG1 HG12 sing N N 361 VAL CG1 HG13 sing N N 362 VAL CG2 HG21 sing N N 363 VAL CG2 HG22 sing N N 364 VAL CG2 HG23 sing N N 365 VAL OXT HXT sing N N 366 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 3 'SULFATE ION' SO4 4 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1BBZ _pdbx_initial_refinement_model.details 'PDB ENTRY 1BBZ' #