data_2OD4 # _entry.id 2OD4 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.383 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2OD4 pdb_00002od4 10.2210/pdb2od4/pdb RCSB RCSB040984 ? ? WWPDB D_1000040984 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2007-01-23 2 'Structure model' 1 1 2008-05-01 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2017-10-18 5 'Structure model' 1 4 2017-10-25 6 'Structure model' 1 5 2023-12-27 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' Advisory 3 3 'Structure model' 'Version format compliance' 4 4 'Structure model' 'Refinement description' 5 5 'Structure model' 'Author supporting evidence' 6 6 'Structure model' 'Data collection' 7 6 'Structure model' 'Database references' 8 6 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' software 2 5 'Structure model' pdbx_struct_assembly_auth_evidence 3 6 'Structure model' chem_comp_atom 4 6 'Structure model' chem_comp_bond 5 6 'Structure model' database_2 6 6 'Structure model' struct_conn 7 6 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_software.classification' 2 4 'Structure model' '_software.name' 3 6 'Structure model' '_database_2.pdbx_DOI' 4 6 'Structure model' '_database_2.pdbx_database_accession' 5 6 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 6 6 'Structure model' '_struct_site.pdbx_auth_asym_id' 7 6 'Structure model' '_struct_site.pdbx_auth_comp_id' 8 6 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_database_status.SG_entry Y _pdbx_database_status.entry_id 2OD4 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2006-12-21 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # _pdbx_database_related.db_name TargetDB _pdbx_database_related.db_id 367439 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _audit_author.name 'Joint Center for Structural Genomics (JCSG)' _audit_author.pdbx_ordinal 1 # _citation.id primary _citation.title ;Crystal structure of hypothetical protein (JCVI_PEP_1096665735785) from an environmental metagenome (unidentified marine microbe), Sorcerer II Global Ocean Sampling experiment at 1.70 A resolution ; _citation.journal_abbrev 'To be published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # _citation_author.citation_id primary _citation_author.name 'Joint Center for Structural Genomics (JCSG)' _citation_author.ordinal 1 _citation_author.identifier_ORCID ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'hypothetical protein' 11721.772 2 ? ? ? ? 2 non-polymer syn 'CHLORIDE ION' 35.453 4 ? ? ? ? 3 non-polymer syn 1,2-ETHANEDIOL 62.068 1 ? ? ? ? 4 water nat water 18.015 188 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;G(MSE)FAGSIP(MSE)YIRVVSITAQSKLQFD(MSE)TVTYFENVWSPKVISLGAISAEFVQSNENSG(MSE)YIIHYP DKQTAISVFDKIKPEVDEVRTQNRIQITEGKRLFRVD ; _entity_poly.pdbx_seq_one_letter_code_can ;GMFAGSIPMYIRVVSITAQSKLQFDMTVTYFENVWSPKVISLGAISAEFVQSNENSGMYIIHYPDKQTAISVFDKIKPEV DEVRTQNRIQITEGKRLFRVD ; _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier 367439 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'CHLORIDE ION' CL 3 1,2-ETHANEDIOL EDO 4 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 MSE n 1 3 PHE n 1 4 ALA n 1 5 GLY n 1 6 SER n 1 7 ILE n 1 8 PRO n 1 9 MSE n 1 10 TYR n 1 11 ILE n 1 12 ARG n 1 13 VAL n 1 14 VAL n 1 15 SER n 1 16 ILE n 1 17 THR n 1 18 ALA n 1 19 GLN n 1 20 SER n 1 21 LYS n 1 22 LEU n 1 23 GLN n 1 24 PHE n 1 25 ASP n 1 26 MSE n 1 27 THR n 1 28 VAL n 1 29 THR n 1 30 TYR n 1 31 PHE n 1 32 GLU n 1 33 ASN n 1 34 VAL n 1 35 TRP n 1 36 SER n 1 37 PRO n 1 38 LYS n 1 39 VAL n 1 40 ILE n 1 41 SER n 1 42 LEU n 1 43 GLY n 1 44 ALA n 1 45 ILE n 1 46 SER n 1 47 ALA n 1 48 GLU n 1 49 PHE n 1 50 VAL n 1 51 GLN n 1 52 SER n 1 53 ASN n 1 54 GLU n 1 55 ASN n 1 56 SER n 1 57 GLY n 1 58 MSE n 1 59 TYR n 1 60 ILE n 1 61 ILE n 1 62 HIS n 1 63 TYR n 1 64 PRO n 1 65 ASP n 1 66 LYS n 1 67 GLN n 1 68 THR n 1 69 ALA n 1 70 ILE n 1 71 SER n 1 72 VAL n 1 73 PHE n 1 74 ASP n 1 75 LYS n 1 76 ILE n 1 77 LYS n 1 78 PRO n 1 79 GLU n 1 80 VAL n 1 81 ASP n 1 82 GLU n 1 83 VAL n 1 84 ARG n 1 85 THR n 1 86 GLN n 1 87 ASN n 1 88 ARG n 1 89 ILE n 1 90 GLN n 1 91 ILE n 1 92 THR n 1 93 GLU n 1 94 GLY n 1 95 LYS n 1 96 ARG n 1 97 LEU n 1 98 PHE n 1 99 ARG n 1 100 VAL n 1 101 ASP n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'uncultured marine organism' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 360281 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type Plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description 'SYNTHETIC GENE: The gene product was based on JCVI_PEP_1096665735785 from the Sorcerer II Global Ocean Sampling experiment' # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CL non-polymer . 'CHLORIDE ION' ? 'Cl -1' 35.453 EDO non-polymer . 1,2-ETHANEDIOL 'ETHYLENE GLYCOL' 'C2 H6 O2' 62.068 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 0 0 GLY GLY A . n A 1 2 MSE 2 1 1 MSE MSE A . n A 1 3 PHE 3 2 2 PHE PHE A . n A 1 4 ALA 4 3 3 ALA ALA A . n A 1 5 GLY 5 4 4 GLY GLY A . n A 1 6 SER 6 5 5 SER SER A . n A 1 7 ILE 7 6 6 ILE ILE A . n A 1 8 PRO 8 7 7 PRO PRO A . n A 1 9 MSE 9 8 8 MSE MSE A . n A 1 10 TYR 10 9 9 TYR TYR A . n A 1 11 ILE 11 10 10 ILE ILE A . n A 1 12 ARG 12 11 11 ARG ARG A . n A 1 13 VAL 13 12 12 VAL VAL A . n A 1 14 VAL 14 13 13 VAL VAL A . n A 1 15 SER 15 14 14 SER SER A . n A 1 16 ILE 16 15 15 ILE ILE A . n A 1 17 THR 17 16 16 THR THR A . n A 1 18 ALA 18 17 17 ALA ALA A . n A 1 19 GLN 19 18 18 GLN GLN A . n A 1 20 SER 20 19 19 SER SER A . n A 1 21 LYS 21 20 20 LYS LYS A . n A 1 22 LEU 22 21 21 LEU LEU A . n A 1 23 GLN 23 22 22 GLN GLN A . n A 1 24 PHE 24 23 23 PHE PHE A . n A 1 25 ASP 25 24 24 ASP ASP A . n A 1 26 MSE 26 25 25 MSE MSE A . n A 1 27 THR 27 26 26 THR THR A . n A 1 28 VAL 28 27 27 VAL VAL A . n A 1 29 THR 29 28 28 THR THR A . n A 1 30 TYR 30 29 29 TYR TYR A . n A 1 31 PHE 31 30 30 PHE PHE A . n A 1 32 GLU 32 31 31 GLU GLU A . n A 1 33 ASN 33 32 32 ASN ASN A . n A 1 34 VAL 34 33 33 VAL VAL A . n A 1 35 TRP 35 34 34 TRP TRP A . n A 1 36 SER 36 35 35 SER SER A . n A 1 37 PRO 37 36 36 PRO PRO A . n A 1 38 LYS 38 37 37 LYS LYS A . n A 1 39 VAL 39 38 38 VAL VAL A . n A 1 40 ILE 40 39 39 ILE ILE A . n A 1 41 SER 41 40 40 SER SER A . n A 1 42 LEU 42 41 41 LEU LEU A . n A 1 43 GLY 43 42 42 GLY GLY A . n A 1 44 ALA 44 43 43 ALA ALA A . n A 1 45 ILE 45 44 44 ILE ILE A . n A 1 46 SER 46 45 45 SER SER A . n A 1 47 ALA 47 46 46 ALA ALA A . n A 1 48 GLU 48 47 47 GLU GLU A . n A 1 49 PHE 49 48 48 PHE PHE A . n A 1 50 VAL 50 49 49 VAL VAL A . n A 1 51 GLN 51 50 50 GLN GLN A . n A 1 52 SER 52 51 51 SER SER A . n A 1 53 ASN 53 52 52 ASN ASN A . n A 1 54 GLU 54 53 53 GLU GLU A . n A 1 55 ASN 55 54 54 ASN ASN A . n A 1 56 SER 56 55 55 SER SER A . n A 1 57 GLY 57 56 56 GLY GLY A . n A 1 58 MSE 58 57 57 MSE MSE A . n A 1 59 TYR 59 58 58 TYR TYR A . n A 1 60 ILE 60 59 59 ILE ILE A . n A 1 61 ILE 61 60 60 ILE ILE A . n A 1 62 HIS 62 61 61 HIS HIS A . n A 1 63 TYR 63 62 62 TYR TYR A . n A 1 64 PRO 64 63 63 PRO PRO A . n A 1 65 ASP 65 64 64 ASP ASP A . n A 1 66 LYS 66 65 65 LYS LYS A . n A 1 67 GLN 67 66 66 GLN GLN A . n A 1 68 THR 68 67 67 THR THR A . n A 1 69 ALA 69 68 68 ALA ALA A . n A 1 70 ILE 70 69 69 ILE ILE A . n A 1 71 SER 71 70 70 SER SER A . n A 1 72 VAL 72 71 71 VAL VAL A . n A 1 73 PHE 73 72 72 PHE PHE A . n A 1 74 ASP 74 73 73 ASP ASP A . n A 1 75 LYS 75 74 74 LYS LYS A . n A 1 76 ILE 76 75 75 ILE ILE A . n A 1 77 LYS 77 76 76 LYS LYS A . n A 1 78 PRO 78 77 77 PRO PRO A . n A 1 79 GLU 79 78 78 GLU GLU A . n A 1 80 VAL 80 79 79 VAL VAL A . n A 1 81 ASP 81 80 80 ASP ASP A . n A 1 82 GLU 82 81 81 GLU GLU A . n A 1 83 VAL 83 82 82 VAL VAL A . n A 1 84 ARG 84 83 83 ARG ARG A . n A 1 85 THR 85 84 84 THR THR A . n A 1 86 GLN 86 85 85 GLN GLN A . n A 1 87 ASN 87 86 86 ASN ASN A . n A 1 88 ARG 88 87 87 ARG ARG A . n A 1 89 ILE 89 88 88 ILE ILE A . n A 1 90 GLN 90 89 89 GLN GLN A . n A 1 91 ILE 91 90 90 ILE ILE A . n A 1 92 THR 92 91 91 THR THR A . n A 1 93 GLU 93 92 92 GLU GLU A . n A 1 94 GLY 94 93 93 GLY GLY A . n A 1 95 LYS 95 94 94 LYS LYS A . n A 1 96 ARG 96 95 95 ARG ARG A . n A 1 97 LEU 97 96 96 LEU LEU A . n A 1 98 PHE 98 97 97 PHE PHE A . n A 1 99 ARG 99 98 98 ARG ARG A . n A 1 100 VAL 100 99 99 VAL VAL A . n A 1 101 ASP 101 100 100 ASP ASP A . n B 1 1 GLY 1 0 0 GLY GLY B . n B 1 2 MSE 2 1 1 MSE MSE B . n B 1 3 PHE 3 2 2 PHE PHE B . n B 1 4 ALA 4 3 3 ALA ALA B . n B 1 5 GLY 5 4 4 GLY GLY B . n B 1 6 SER 6 5 5 SER SER B . n B 1 7 ILE 7 6 6 ILE ILE B . n B 1 8 PRO 8 7 7 PRO PRO B . n B 1 9 MSE 9 8 8 MSE MSE B . n B 1 10 TYR 10 9 9 TYR TYR B . n B 1 11 ILE 11 10 10 ILE ILE B . n B 1 12 ARG 12 11 11 ARG ARG B . n B 1 13 VAL 13 12 12 VAL VAL B . n B 1 14 VAL 14 13 13 VAL VAL B . n B 1 15 SER 15 14 14 SER SER B . n B 1 16 ILE 16 15 15 ILE ILE B . n B 1 17 THR 17 16 16 THR THR B . n B 1 18 ALA 18 17 17 ALA ALA B . n B 1 19 GLN 19 18 18 GLN GLN B . n B 1 20 SER 20 19 19 SER SER B . n B 1 21 LYS 21 20 20 LYS LYS B . n B 1 22 LEU 22 21 21 LEU LEU B . n B 1 23 GLN 23 22 22 GLN GLN B . n B 1 24 PHE 24 23 23 PHE PHE B . n B 1 25 ASP 25 24 24 ASP ASP B . n B 1 26 MSE 26 25 25 MSE MSE B . n B 1 27 THR 27 26 26 THR THR B . n B 1 28 VAL 28 27 27 VAL VAL B . n B 1 29 THR 29 28 28 THR THR B . n B 1 30 TYR 30 29 29 TYR TYR B . n B 1 31 PHE 31 30 30 PHE PHE B . n B 1 32 GLU 32 31 31 GLU GLU B . n B 1 33 ASN 33 32 32 ASN ASN B . n B 1 34 VAL 34 33 33 VAL VAL B . n B 1 35 TRP 35 34 34 TRP TRP B . n B 1 36 SER 36 35 35 SER SER B . n B 1 37 PRO 37 36 36 PRO PRO B . n B 1 38 LYS 38 37 37 LYS LYS B . n B 1 39 VAL 39 38 38 VAL VAL B . n B 1 40 ILE 40 39 39 ILE ILE B . n B 1 41 SER 41 40 40 SER SER B . n B 1 42 LEU 42 41 41 LEU LEU B . n B 1 43 GLY 43 42 42 GLY GLY B . n B 1 44 ALA 44 43 43 ALA ALA B . n B 1 45 ILE 45 44 44 ILE ILE B . n B 1 46 SER 46 45 45 SER SER B . n B 1 47 ALA 47 46 46 ALA ALA B . n B 1 48 GLU 48 47 47 GLU GLU B . n B 1 49 PHE 49 48 48 PHE PHE B . n B 1 50 VAL 50 49 49 VAL VAL B . n B 1 51 GLN 51 50 50 GLN GLN B . n B 1 52 SER 52 51 51 SER SER B . n B 1 53 ASN 53 52 52 ASN ASN B . n B 1 54 GLU 54 53 53 GLU GLU B . n B 1 55 ASN 55 54 54 ASN ASN B . n B 1 56 SER 56 55 55 SER SER B . n B 1 57 GLY 57 56 56 GLY GLY B . n B 1 58 MSE 58 57 57 MSE MSE B . n B 1 59 TYR 59 58 58 TYR TYR B . n B 1 60 ILE 60 59 59 ILE ILE B . n B 1 61 ILE 61 60 60 ILE ILE B . n B 1 62 HIS 62 61 61 HIS HIS B . n B 1 63 TYR 63 62 62 TYR TYR B . n B 1 64 PRO 64 63 63 PRO PRO B . n B 1 65 ASP 65 64 64 ASP ASP B . n B 1 66 LYS 66 65 65 LYS LYS B . n B 1 67 GLN 67 66 66 GLN GLN B . n B 1 68 THR 68 67 67 THR THR B . n B 1 69 ALA 69 68 68 ALA ALA B . n B 1 70 ILE 70 69 69 ILE ILE B . n B 1 71 SER 71 70 70 SER SER B . n B 1 72 VAL 72 71 71 VAL VAL B . n B 1 73 PHE 73 72 72 PHE PHE B . n B 1 74 ASP 74 73 73 ASP ASP B . n B 1 75 LYS 75 74 74 LYS LYS B . n B 1 76 ILE 76 75 75 ILE ILE B . n B 1 77 LYS 77 76 76 LYS LYS B . n B 1 78 PRO 78 77 77 PRO PRO B . n B 1 79 GLU 79 78 78 GLU GLU B . n B 1 80 VAL 80 79 79 VAL VAL B . n B 1 81 ASP 81 80 80 ASP ASP B . n B 1 82 GLU 82 81 81 GLU GLU B . n B 1 83 VAL 83 82 82 VAL VAL B . n B 1 84 ARG 84 83 83 ARG ARG B . n B 1 85 THR 85 84 84 THR THR B . n B 1 86 GLN 86 85 85 GLN GLN B . n B 1 87 ASN 87 86 86 ASN ASN B . n B 1 88 ARG 88 87 87 ARG ARG B . n B 1 89 ILE 89 88 88 ILE ILE B . n B 1 90 GLN 90 89 89 GLN GLN B . n B 1 91 ILE 91 90 90 ILE ILE B . n B 1 92 THR 92 91 91 THR THR B . n B 1 93 GLU 93 92 92 GLU GLU B . n B 1 94 GLY 94 93 93 GLY GLY B . n B 1 95 LYS 95 94 94 LYS LYS B . n B 1 96 ARG 96 95 95 ARG ARG B . n B 1 97 LEU 97 96 96 LEU LEU B . n B 1 98 PHE 98 97 97 PHE PHE B . n B 1 99 ARG 99 98 98 ARG ARG B . n B 1 100 VAL 100 99 99 VAL VAL B . n B 1 101 ASP 101 100 100 ASP ASP B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 CL 1 101 3 CL CL A . D 2 CL 1 102 4 CL CL A . E 3 EDO 1 103 1 EDO EDO A . F 2 CL 1 101 2 CL CL B . G 2 CL 1 102 5 CL CL B . H 4 HOH 1 104 6 HOH HOH A . H 4 HOH 2 105 7 HOH HOH A . H 4 HOH 3 106 15 HOH HOH A . H 4 HOH 4 107 16 HOH HOH A . H 4 HOH 5 108 17 HOH HOH A . H 4 HOH 6 109 19 HOH HOH A . H 4 HOH 7 110 20 HOH HOH A . H 4 HOH 8 111 22 HOH HOH A . H 4 HOH 9 112 23 HOH HOH A . H 4 HOH 10 113 24 HOH HOH A . H 4 HOH 11 114 25 HOH HOH A . H 4 HOH 12 115 27 HOH HOH A . H 4 HOH 13 116 29 HOH HOH A . H 4 HOH 14 117 31 HOH HOH A . H 4 HOH 15 118 33 HOH HOH A . H 4 HOH 16 119 36 HOH HOH A . H 4 HOH 17 120 37 HOH HOH A . H 4 HOH 18 121 38 HOH HOH A . H 4 HOH 19 122 39 HOH HOH A . H 4 HOH 20 123 40 HOH HOH A . H 4 HOH 21 124 45 HOH HOH A . H 4 HOH 22 125 49 HOH HOH A . H 4 HOH 23 126 52 HOH HOH A . H 4 HOH 24 127 54 HOH HOH A . H 4 HOH 25 128 55 HOH HOH A . H 4 HOH 26 129 57 HOH HOH A . H 4 HOH 27 130 59 HOH HOH A . H 4 HOH 28 131 60 HOH HOH A . H 4 HOH 29 132 61 HOH HOH A . H 4 HOH 30 133 63 HOH HOH A . H 4 HOH 31 134 64 HOH HOH A . H 4 HOH 32 135 69 HOH HOH A . H 4 HOH 33 136 70 HOH HOH A . H 4 HOH 34 137 76 HOH HOH A . H 4 HOH 35 138 78 HOH HOH A . H 4 HOH 36 139 79 HOH HOH A . H 4 HOH 37 140 82 HOH HOH A . H 4 HOH 38 141 83 HOH HOH A . H 4 HOH 39 142 84 HOH HOH A . H 4 HOH 40 143 88 HOH HOH A . H 4 HOH 41 144 90 HOH HOH A . H 4 HOH 42 145 93 HOH HOH A . H 4 HOH 43 146 96 HOH HOH A . H 4 HOH 44 147 98 HOH HOH A . H 4 HOH 45 148 101 HOH HOH A . H 4 HOH 46 149 104 HOH HOH A . H 4 HOH 47 150 106 HOH HOH A . H 4 HOH 48 151 107 HOH HOH A . H 4 HOH 49 152 113 HOH HOH A . H 4 HOH 50 153 116 HOH HOH A . H 4 HOH 51 154 117 HOH HOH A . H 4 HOH 52 155 119 HOH HOH A . H 4 HOH 53 156 121 HOH HOH A . H 4 HOH 54 157 122 HOH HOH A . H 4 HOH 55 158 124 HOH HOH A . H 4 HOH 56 159 125 HOH HOH A . H 4 HOH 57 160 127 HOH HOH A . H 4 HOH 58 161 131 HOH HOH A . H 4 HOH 59 162 132 HOH HOH A . H 4 HOH 60 163 133 HOH HOH A . H 4 HOH 61 164 138 HOH HOH A . H 4 HOH 62 165 139 HOH HOH A . H 4 HOH 63 166 142 HOH HOH A . H 4 HOH 64 167 145 HOH HOH A . H 4 HOH 65 168 147 HOH HOH A . H 4 HOH 66 169 148 HOH HOH A . H 4 HOH 67 170 159 HOH HOH A . H 4 HOH 68 171 160 HOH HOH A . H 4 HOH 69 172 161 HOH HOH A . H 4 HOH 70 173 162 HOH HOH A . H 4 HOH 71 174 164 HOH HOH A . H 4 HOH 72 175 165 HOH HOH A . H 4 HOH 73 176 167 HOH HOH A . H 4 HOH 74 177 169 HOH HOH A . H 4 HOH 75 178 171 HOH HOH A . H 4 HOH 76 179 172 HOH HOH A . H 4 HOH 77 180 174 HOH HOH A . H 4 HOH 78 181 175 HOH HOH A . H 4 HOH 79 182 178 HOH HOH A . H 4 HOH 80 183 183 HOH HOH A . H 4 HOH 81 184 186 HOH HOH A . H 4 HOH 82 185 188 HOH HOH A . H 4 HOH 83 186 190 HOH HOH A . H 4 HOH 84 187 191 HOH HOH A . I 4 HOH 1 103 8 HOH HOH B . I 4 HOH 2 104 9 HOH HOH B . I 4 HOH 3 105 10 HOH HOH B . I 4 HOH 4 106 11 HOH HOH B . I 4 HOH 5 107 12 HOH HOH B . I 4 HOH 6 108 13 HOH HOH B . I 4 HOH 7 109 14 HOH HOH B . I 4 HOH 8 110 18 HOH HOH B . I 4 HOH 9 111 21 HOH HOH B . I 4 HOH 10 112 26 HOH HOH B . I 4 HOH 11 113 28 HOH HOH B . I 4 HOH 12 114 30 HOH HOH B . I 4 HOH 13 115 32 HOH HOH B . I 4 HOH 14 116 34 HOH HOH B . I 4 HOH 15 117 35 HOH HOH B . I 4 HOH 16 118 41 HOH HOH B . I 4 HOH 17 119 42 HOH HOH B . I 4 HOH 18 120 43 HOH HOH B . I 4 HOH 19 121 44 HOH HOH B . I 4 HOH 20 122 46 HOH HOH B . I 4 HOH 21 123 47 HOH HOH B . I 4 HOH 22 124 48 HOH HOH B . I 4 HOH 23 125 50 HOH HOH B . I 4 HOH 24 126 51 HOH HOH B . I 4 HOH 25 127 53 HOH HOH B . I 4 HOH 26 128 56 HOH HOH B . I 4 HOH 27 129 58 HOH HOH B . I 4 HOH 28 130 62 HOH HOH B . I 4 HOH 29 131 65 HOH HOH B . I 4 HOH 30 132 66 HOH HOH B . I 4 HOH 31 133 67 HOH HOH B . I 4 HOH 32 134 68 HOH HOH B . I 4 HOH 33 135 71 HOH HOH B . I 4 HOH 34 136 72 HOH HOH B . I 4 HOH 35 137 73 HOH HOH B . I 4 HOH 36 138 74 HOH HOH B . I 4 HOH 37 139 75 HOH HOH B . I 4 HOH 38 140 77 HOH HOH B . I 4 HOH 39 141 80 HOH HOH B . I 4 HOH 40 142 81 HOH HOH B . I 4 HOH 41 143 85 HOH HOH B . I 4 HOH 42 144 86 HOH HOH B . I 4 HOH 43 145 87 HOH HOH B . I 4 HOH 44 146 89 HOH HOH B . I 4 HOH 45 147 91 HOH HOH B . I 4 HOH 46 148 92 HOH HOH B . I 4 HOH 47 149 94 HOH HOH B . I 4 HOH 48 150 95 HOH HOH B . I 4 HOH 49 151 97 HOH HOH B . I 4 HOH 50 152 99 HOH HOH B . I 4 HOH 51 153 100 HOH HOH B . I 4 HOH 52 154 102 HOH HOH B . I 4 HOH 53 155 103 HOH HOH B . I 4 HOH 54 156 105 HOH HOH B . I 4 HOH 55 157 108 HOH HOH B . I 4 HOH 56 158 109 HOH HOH B . I 4 HOH 57 159 110 HOH HOH B . I 4 HOH 58 160 111 HOH HOH B . I 4 HOH 59 161 112 HOH HOH B . I 4 HOH 60 162 114 HOH HOH B . I 4 HOH 61 163 115 HOH HOH B . I 4 HOH 62 164 118 HOH HOH B . I 4 HOH 63 165 120 HOH HOH B . I 4 HOH 64 166 123 HOH HOH B . I 4 HOH 65 167 126 HOH HOH B . I 4 HOH 66 168 128 HOH HOH B . I 4 HOH 67 169 129 HOH HOH B . I 4 HOH 68 170 130 HOH HOH B . I 4 HOH 69 171 134 HOH HOH B . I 4 HOH 70 172 135 HOH HOH B . I 4 HOH 71 173 136 HOH HOH B . I 4 HOH 72 174 137 HOH HOH B . I 4 HOH 73 175 140 HOH HOH B . I 4 HOH 74 176 141 HOH HOH B . I 4 HOH 75 177 143 HOH HOH B . I 4 HOH 76 178 144 HOH HOH B . I 4 HOH 77 179 146 HOH HOH B . I 4 HOH 78 180 149 HOH HOH B . I 4 HOH 79 181 150 HOH HOH B . I 4 HOH 80 182 151 HOH HOH B . I 4 HOH 81 183 152 HOH HOH B . I 4 HOH 82 184 153 HOH HOH B . I 4 HOH 83 185 154 HOH HOH B . I 4 HOH 84 186 155 HOH HOH B . I 4 HOH 85 187 156 HOH HOH B . I 4 HOH 86 188 157 HOH HOH B . I 4 HOH 87 189 158 HOH HOH B . I 4 HOH 88 190 163 HOH HOH B . I 4 HOH 89 191 166 HOH HOH B . I 4 HOH 90 192 168 HOH HOH B . I 4 HOH 91 193 170 HOH HOH B . I 4 HOH 92 194 173 HOH HOH B . I 4 HOH 93 195 176 HOH HOH B . I 4 HOH 94 196 177 HOH HOH B . I 4 HOH 95 197 179 HOH HOH B . I 4 HOH 96 198 180 HOH HOH B . I 4 HOH 97 199 181 HOH HOH B . I 4 HOH 98 200 182 HOH HOH B . I 4 HOH 99 201 184 HOH HOH B . I 4 HOH 100 202 185 HOH HOH B . I 4 HOH 101 203 187 HOH HOH B . I 4 HOH 102 204 189 HOH HOH B . I 4 HOH 103 205 192 HOH HOH B . I 4 HOH 104 206 193 HOH HOH B . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 B GLU 53 ? CD ? B GLU 54 CD 2 1 Y 1 B GLU 53 ? OE1 ? B GLU 54 OE1 3 1 Y 1 B GLU 53 ? OE2 ? B GLU 54 OE2 # loop_ _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id _software.pdbx_ordinal MolProbity 3beta29 ? package 'D.C. & J.S. Richardson lab' molprobity@kinemage.biochem.duke.edu 'model building' http://kinemage.biochem.duke.edu/molprobity/ ? ? 1 SOLVE . ? package 'Tom Terwilliger' terwilliger@LANL.gov phasing http://www.solve.lanl.gov/ ? ? 2 REFMAC 5.2.0019 ? program 'Murshudov, G.N.' ccp4@dl.ac.uk refinement http://www.ccp4.ac.uk/main.html Fortran_77 ? 3 XSCALE . ? package 'Wolfgang Kabsch' ? 'data scaling' http://www.mpimf-heidelberg.mpg.de/~kabsch/xds/xscale_program.html ? ? 4 PDB_EXTRACT 2.000 'April. 3, 2006' package PDB sw-help@rcsb.rutgers.edu 'data extraction' http://pdb.rutgers.edu/software/ C++ ? 5 Blu-Ice 'V. 5.0' ? ? ? ? 'data collection' ? ? ? 6 XDS . ? ? ? ? 'data reduction' ? ? ? 7 # _cell.entry_id 2OD4 _cell.length_a 31.890 _cell.length_b 77.790 _cell.length_c 43.810 _cell.angle_alpha 90.000 _cell.angle_beta 102.660 _cell.angle_gamma 90.000 _cell.pdbx_unique_axis ? _cell.Z_PDB 4 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 2OD4 _symmetry.Int_Tables_number 4 _symmetry.space_group_name_H-M 'P 1 21 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # _exptl.crystals_number 1 _exptl.method 'X-RAY DIFFRACTION' _exptl.entry_id 2OD4 # _exptl_crystal.id 1 _exptl_crystal.density_Matthews 2.26 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 45.59 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP, NANODROP' _exptl_crystal_grow.pH 4.5 _exptl_crystal_grow.temp 277 _exptl_crystal_grow.pdbx_details '0.2M Li2SO4, 2.5M NaCl, 0.1M Acetate pH 4.5, VAPOR DIFFUSION, SITTING DROP, NANODROP, temperature 277K' _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'MARMOSAIC 325 mm CCD' _diffrn_detector.details 'Flat mirror (vertical focusing)' _diffrn_detector.pdbx_collection_date 2006-11-19 # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Single crystal Si(111) bent monochromator (horizontal focusing)' _diffrn_radiation.pdbx_diffrn_protocol MAD _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_scattering_type x-ray # loop_ _diffrn_radiation_wavelength.id _diffrn_radiation_wavelength.wavelength _diffrn_radiation_wavelength.wt 1 0.91837 1.0 2 0.97966 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.pdbx_synchrotron_beamline BL11-1 _diffrn_source.type 'SSRL BEAMLINE BL11-1' _diffrn_source.pdbx_wavelength_list '0.91837, 0.97966' _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_site SSRL # _reflns.entry_id 2OD4 _reflns.d_resolution_high 1.700 _reflns.d_resolution_low 28.892 _reflns.number_obs 22797 _reflns.pdbx_Rmerge_I_obs 0.061 _reflns.pdbx_netI_over_sigmaI 6.76 _reflns.percent_possible_obs 98.30 _reflns.B_iso_Wilson_estimate 21.1 _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.number_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_redundancy ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.number_measured_obs _reflns_shell.number_measured_all _reflns_shell.number_unique_obs _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_redundancy _reflns_shell.percent_possible_obs _reflns_shell.number_unique_all _reflns_shell.percent_possible_all _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id 1.70 1.76 7045 ? ? 0.403 2.02 ? ? ? ? ? 99.0 1 1 1.76 1.83 7002 ? ? 0.337 2.47 ? ? ? ? ? 98.9 2 1 1.83 1.91 6894 ? ? 0.257 3.07 ? ? ? ? ? 98.4 3 1 1.91 2.02 7704 ? ? 0.175 4.27 ? ? ? ? ? 98.6 4 1 2.02 2.14 6687 ? ? 0.125 5.55 ? ? ? ? ? 99.0 5 1 2.14 2.31 7288 ? ? 0.091 6.89 ? ? ? ? ? 98.5 6 1 2.31 2.54 6984 ? ? 0.075 8.06 ? ? ? ? ? 98.3 7 1 2.54 2.90 7006 ? ? 0.063 9.66 ? ? ? ? ? 97.9 8 1 2.90 3.66 7195 ? ? 0.05 12.10 ? ? ? ? ? 97.5 9 1 3.66 28.9 7089 ? ? 0.04 13.73 ? ? ? ? ? 96.5 10 1 # _refine.entry_id 2OD4 _refine.ls_d_res_high 1.700 _refine.ls_d_res_low 28.892 _refine.pdbx_ls_sigma_F 0.00 _refine.ls_percent_reflns_obs 99.110 _refine.ls_number_reflns_obs 22774 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details RANDOM _refine.details ;1. HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS. 2. A MET-INHIBITION PROTOCOL WAS USED FOR SELENOMETHIONINE INCORPORATION DURING PROTEIN EXPRESSION. THE OCCUPANCY OF THE SE ATOMS IN THE MSE RESIDUES WAS REDUCED TO 0.75 FOR THE REDUCED SCATTERING POWER DUE TO PARTIAL S-MET INCORPORATION. 3. AN EDO MOLECULE FROM THE CRYO SOLUTION IS MODELED. 4. ATOM RECORDS CONTAIN RESIDUAL B FACTORS ONLY. ; _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.159 _refine.ls_R_factor_R_free 0.193 _refine.ls_percent_reflns_R_free 5.100 _refine.ls_number_reflns_R_free 1172 _refine.B_iso_mean 20.689 _refine.aniso_B[1][1] 2.630 _refine.aniso_B[2][2] -0.970 _refine.aniso_B[3][3] -1.510 _refine.aniso_B[1][2] 0.000 _refine.aniso_B[1][3] 0.350 _refine.aniso_B[2][3] 0.000 _refine.correlation_coeff_Fo_to_Fc 0.971 _refine.correlation_coeff_Fo_to_Fc_free 0.958 _refine.pdbx_overall_ESU_R 0.100 _refine.pdbx_overall_ESU_R_Free 0.098 _refine.overall_SU_ML 0.075 _refine.overall_SU_B 4.644 _refine.solvent_model_details 'BABINET MODEL WITH MASK' _refine.pdbx_solvent_vdw_probe_radii 1.200 _refine.pdbx_solvent_ion_probe_radii 0.800 _refine.pdbx_solvent_shrinkage_radii 0.800 _refine.pdbx_method_to_determine_struct MAD _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD WITH PHASES' _refine.pdbx_ls_sigma_I ? _refine.ls_number_reflns_all ? _refine.ls_R_factor_obs 0.161 _refine.ls_redundancy_reflns_obs ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_starting_model ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.pdbx_isotropic_thermal_model ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag 'LIKELY RESIDUAL' _refine.pdbx_diffrn_id 1 _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1619 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 8 _refine_hist.number_atoms_solvent 188 _refine_hist.number_atoms_total 1815 _refine_hist.d_res_high 1.700 _refine_hist.d_res_low 28.892 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 1692 0.015 0.022 ? 'X-RAY DIFFRACTION' ? r_bond_other_d 1158 0.001 0.020 ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 2297 1.415 1.948 ? 'X-RAY DIFFRACTION' ? r_angle_other_deg 2836 0.881 3.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 214 5.445 5.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 77 36.483 24.286 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 308 13.235 15.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 10 17.156 15.000 ? 'X-RAY DIFFRACTION' ? r_chiral_restr 261 0.086 0.200 ? 'X-RAY DIFFRACTION' ? r_gen_planes_refined 1867 0.006 0.020 ? 'X-RAY DIFFRACTION' ? r_gen_planes_other 345 0.001 0.020 ? 'X-RAY DIFFRACTION' ? r_nbd_refined 290 0.215 0.200 ? 'X-RAY DIFFRACTION' ? r_nbd_other 1168 0.188 0.200 ? 'X-RAY DIFFRACTION' ? r_nbtor_refined 851 0.187 0.200 ? 'X-RAY DIFFRACTION' ? r_nbtor_other 953 0.087 0.200 ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 123 0.175 0.200 ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 23 0.261 0.200 ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other 52 0.285 0.200 ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 14 0.145 0.200 ? 'X-RAY DIFFRACTION' ? r_mcbond_it 1231 2.427 3.000 ? 'X-RAY DIFFRACTION' ? r_mcbond_other 411 0.503 3.000 ? 'X-RAY DIFFRACTION' ? r_mcangle_it 1696 2.832 5.000 ? 'X-RAY DIFFRACTION' ? r_scbond_it 740 5.384 8.000 ? 'X-RAY DIFFRACTION' ? r_scangle_it 594 7.614 11.000 ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.d_res_high 1.700 _refine_ls_shell.d_res_low 1.744 _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.percent_reflns_obs 99.590 _refine_ls_shell.number_reflns_R_work 1608 _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_R_work 0.227 _refine_ls_shell.R_factor_R_free 0.25 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 74 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.number_reflns_all ? _refine_ls_shell.number_reflns_obs 1682 _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 2OD4 _struct.title ;Crystal structure of a dimeric ferredoxin-like protein (jcvi_pep_1096665735785) from uncultured marine organism at 1.70 A resolution ; _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.text ;Metagenomics target, structural genomics, Joint Center for Structural Genomics, JCSG, Protein Structure Initiative, PSI-2, unknown function ; _struct_keywords.pdbx_keywords 'UNKNOWN FUNCTION' _struct_keywords.entry_id 2OD4 # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 2 ? E N N 3 ? F N N 2 ? G N N 2 ? H N N 4 ? I N N 4 ? # _struct_ref.id 1 _struct_ref.entity_id 1 _struct_ref.db_name PDB _struct_ref.db_code 2OD4 _struct_ref.pdbx_db_accession 2OD4 _struct_ref.pdbx_db_isoform ? _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 2OD4 A 1 ? 101 ? 2OD4 0 ? 100 ? 0 100 2 1 2OD4 B 1 ? 101 ? 2OD4 0 ? 100 ? 0 100 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 3350 ? 1 MORE -58 ? 1 'SSA (A^2)' 10670 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I # loop_ _pdbx_struct_assembly_auth_evidence.id _pdbx_struct_assembly_auth_evidence.assembly_id _pdbx_struct_assembly_auth_evidence.experimental_support _pdbx_struct_assembly_auth_evidence.details 1 1 'gel filtration' ? 2 1 'light scattering' ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 _struct_biol.details ;SIZE EXCLUSION CHROMATOGRAPHY WITH STATIC LIGHT SCATTERING SUPPORTS THE ASSIGNMENT OF A DIMER AS A BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE. ; _struct_biol.pdbx_parent_biol_id ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 SER A 20 ? VAL A 34 ? SER A 19 VAL A 33 1 ? 15 HELX_P HELX_P2 2 VAL A 34 ? GLY A 43 ? VAL A 33 GLY A 42 1 ? 10 HELX_P HELX_P3 3 ASP A 65 ? ASN A 87 ? ASP A 64 ASN A 86 1 ? 23 HELX_P HELX_P4 4 SER B 20 ? VAL B 34 ? SER B 19 VAL B 33 1 ? 15 HELX_P HELX_P5 5 VAL B 34 ? GLY B 43 ? VAL B 33 GLY B 42 1 ? 10 HELX_P HELX_P6 6 ASP B 65 ? LYS B 75 ? ASP B 64 LYS B 74 1 ? 11 HELX_P HELX_P7 7 ILE B 76 ? ASN B 87 ? ILE B 75 ASN B 86 1 ? 12 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A GLY 1 C ? ? ? 1_555 A MSE 2 N ? ? A GLY 0 A MSE 1 1_555 ? ? ? ? ? ? ? 1.323 ? ? covale2 covale both ? A MSE 2 C ? ? ? 1_555 A PHE 3 N ? ? A MSE 1 A PHE 2 1_555 ? ? ? ? ? ? ? 1.326 ? ? covale3 covale both ? A PRO 8 C ? ? ? 1_555 A MSE 9 N ? ? A PRO 7 A MSE 8 1_555 ? ? ? ? ? ? ? 1.342 ? ? covale4 covale both ? A MSE 9 C ? ? ? 1_555 A TYR 10 N ? ? A MSE 8 A TYR 9 1_555 ? ? ? ? ? ? ? 1.339 ? ? covale5 covale both ? A ASP 25 C ? ? ? 1_555 A MSE 26 N ? ? A ASP 24 A MSE 25 1_555 ? ? ? ? ? ? ? 1.327 ? ? covale6 covale both ? A MSE 26 C ? ? ? 1_555 A THR 27 N ? ? A MSE 25 A THR 26 1_555 ? ? ? ? ? ? ? 1.326 ? ? covale7 covale both ? A GLY 57 C ? ? ? 1_555 A MSE 58 N ? ? A GLY 56 A MSE 57 1_555 ? ? ? ? ? ? ? 1.324 ? ? covale8 covale both ? A MSE 58 C ? ? ? 1_555 A TYR 59 N ? ? A MSE 57 A TYR 58 1_555 ? ? ? ? ? ? ? 1.323 ? ? covale9 covale both ? B GLY 1 C ? ? ? 1_555 B MSE 2 N ? ? B GLY 0 B MSE 1 1_555 ? ? ? ? ? ? ? 1.333 ? ? covale10 covale both ? B MSE 2 C ? ? ? 1_555 B PHE 3 N ? ? B MSE 1 B PHE 2 1_555 ? ? ? ? ? ? ? 1.324 ? ? covale11 covale both ? B PRO 8 C ? ? ? 1_555 B MSE 9 N ? ? B PRO 7 B MSE 8 1_555 ? ? ? ? ? ? ? 1.324 ? ? covale12 covale both ? B MSE 9 C ? ? ? 1_555 B TYR 10 N ? ? B MSE 8 B TYR 9 1_555 ? ? ? ? ? ? ? 1.323 ? ? covale13 covale both ? B ASP 25 C ? ? ? 1_555 B MSE 26 N ? ? B ASP 24 B MSE 25 1_555 ? ? ? ? ? ? ? 1.338 ? ? covale14 covale both ? B MSE 26 C ? ? ? 1_555 B THR 27 N ? ? B MSE 25 B THR 26 1_555 ? ? ? ? ? ? ? 1.336 ? ? covale15 covale both ? B GLY 57 C ? ? ? 1_555 B MSE 58 N ? ? B GLY 56 B MSE 57 1_555 ? ? ? ? ? ? ? 1.330 ? ? covale16 covale both ? B MSE 58 C ? ? ? 1_555 B TYR 59 N ? ? B MSE 57 B TYR 58 1_555 ? ? ? ? ? ? ? 1.334 ? ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 9 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel A 5 6 ? anti-parallel A 6 7 ? anti-parallel A 7 8 ? anti-parallel A 8 9 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 TYR A 10 ? THR A 17 ? TYR A 9 THR A 16 A 2 SER A 56 ? TYR A 63 ? SER A 55 TYR A 62 A 3 SER A 46 ? ASN A 53 ? SER A 45 ASN A 52 A 4 ARG B 88 ? VAL B 100 ? ARG B 87 VAL B 99 A 5 TYR B 10 ? THR B 17 ? TYR B 9 THR B 16 A 6 SER B 56 ? TYR B 63 ? SER B 55 TYR B 62 A 7 SER B 46 ? ASN B 53 ? SER B 45 ASN B 52 A 8 ARG A 88 ? VAL A 100 ? ARG A 87 VAL A 99 A 9 TYR A 10 ? THR A 17 ? TYR A 9 THR A 16 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N ARG A 12 ? N ARG A 11 O ILE A 61 ? O ILE A 60 A 2 3 O ILE A 60 ? O ILE A 59 N GLU A 48 ? N GLU A 47 A 3 4 N PHE A 49 ? N PHE A 48 O LEU B 97 ? O LEU B 96 A 4 5 O GLN B 90 ? O GLN B 89 N SER B 15 ? N SER B 14 A 5 6 N VAL B 14 ? N VAL B 13 O TYR B 59 ? O TYR B 58 A 6 7 O ILE B 60 ? O ILE B 59 N GLU B 48 ? N GLU B 47 A 7 8 O ALA B 47 ? O ALA B 46 N VAL A 100 ? N VAL A 99 A 8 9 O GLN A 90 ? O GLN A 89 N SER A 15 ? N SER A 14 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software B CL 101 ? 4 'BINDING SITE FOR RESIDUE CL B 101' AC2 Software A CL 101 ? 3 'BINDING SITE FOR RESIDUE CL A 101' AC3 Software A CL 102 ? 3 'BINDING SITE FOR RESIDUE CL A 102' AC4 Software B CL 102 ? 2 'BINDING SITE FOR RESIDUE CL B 102' AC5 Software A EDO 103 ? 5 'BINDING SITE FOR RESIDUE EDO A 103' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 4 ARG B 12 ? ARG B 11 . ? 1_555 ? 2 AC1 4 TRP B 35 ? TRP B 34 . ? 1_555 ? 3 AC1 4 ILE B 61 ? ILE B 60 . ? 1_555 ? 4 AC1 4 TYR B 63 ? TYR B 62 . ? 1_555 ? 5 AC2 3 ARG A 12 ? ARG A 11 . ? 1_555 ? 6 AC2 3 TYR A 63 ? TYR A 62 . ? 1_555 ? 7 AC2 3 EDO E . ? EDO A 103 . ? 1_555 ? 8 AC3 3 ARG A 84 ? ARG A 83 . ? 1_555 ? 9 AC3 3 GLN A 90 ? GLN A 89 . ? 1_555 ? 10 AC3 3 ILE A 91 ? ILE A 90 . ? 1_555 ? 11 AC4 2 ARG A 96 ? ARG A 95 . ? 1_455 ? 12 AC4 2 ARG B 88 ? ARG B 87 . ? 1_555 ? 13 AC5 5 ARG A 12 ? ARG A 11 . ? 1_555 ? 14 AC5 5 TRP A 35 ? TRP A 34 . ? 1_555 ? 15 AC5 5 PHE A 73 ? PHE A 72 . ? 1_555 ? 16 AC5 5 ILE A 76 ? ILE A 75 . ? 1_555 ? 17 AC5 5 CL C . ? CL A 101 . ? 1_555 ? # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 O _pdbx_validate_close_contact.auth_asym_id_1 A _pdbx_validate_close_contact.auth_comp_id_1 ASN _pdbx_validate_close_contact.auth_seq_id_1 86 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 O _pdbx_validate_close_contact.auth_asym_id_2 A _pdbx_validate_close_contact.auth_comp_id_2 HOH _pdbx_validate_close_contact.auth_seq_id_2 128 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 2.19 # _pdbx_validate_torsion.id 1 _pdbx_validate_torsion.PDB_model_num 1 _pdbx_validate_torsion.auth_comp_id VAL _pdbx_validate_torsion.auth_asym_id A _pdbx_validate_torsion.auth_seq_id 33 _pdbx_validate_torsion.PDB_ins_code ? _pdbx_validate_torsion.label_alt_id ? _pdbx_validate_torsion.phi -120.78 _pdbx_validate_torsion.psi -53.84 # _pdbx_SG_project.project_name 'PSI, Protein Structure Initiative' _pdbx_SG_project.full_name_of_center 'Joint Center for Structural Genomics' _pdbx_SG_project.id 1 _pdbx_SG_project.initial_of_center JCSG # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 2 A MSE 1 ? MET SELENOMETHIONINE 2 A MSE 9 A MSE 8 ? MET SELENOMETHIONINE 3 A MSE 26 A MSE 25 ? MET SELENOMETHIONINE 4 A MSE 58 A MSE 57 ? MET SELENOMETHIONINE 5 B MSE 2 B MSE 1 ? MET SELENOMETHIONINE 6 B MSE 9 B MSE 8 ? MET SELENOMETHIONINE 7 B MSE 26 B MSE 25 ? MET SELENOMETHIONINE 8 B MSE 58 B MSE 57 ? MET SELENOMETHIONINE # loop_ _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.pdbx_refine_id 1 ? refined 4.0350 36.6640 29.8930 -0.1134 -0.0025 0.0122 0.0212 -0.0262 -0.0051 0.3985 0.5512 2.7460 0.4561 0.0990 0.3953 -0.0268 0.0084 0.0184 0.0179 -0.0179 -0.0474 -0.0763 -0.1476 -0.0776 'X-RAY DIFFRACTION' 2 ? refined -0.9800 25.3830 43.7510 -0.0861 -0.0072 0.0187 0.0104 -0.0187 -0.0034 0.3023 0.7154 1.2012 -0.0235 -0.2899 0.0084 -0.0044 -0.0012 0.0056 -0.0186 -0.0115 -0.0187 0.0140 0.1186 -0.0974 'X-RAY DIFFRACTION' # loop_ _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.selection_details 1 1 A 1 A 101 ALL A 0 A 100 'X-RAY DIFFRACTION' ? 2 2 B 1 B 101 ALL B 0 B 100 'X-RAY DIFFRACTION' ? # _phasing.method MAD # loop_ _pdbx_database_remark.id _pdbx_database_remark.text 300 ;BIOMOLECULE: 1,2 THIS ENTRY CONTAINS THE CRYSTALLOGRAPHIC ASYMMETRIC UNIT WHICH CONSISTS OF 2 CHAINS. SEE REMARK 350 FOR INFORMATION ON GENERATING THE BIOLOGICAL MOLECULE(S). SIZE EXCLUSION CHROMATOGRAPHY WITH STATIC LIGHT SCATTERING SUPPORTS THE ASSIGNMENT OF A DIMER AS A BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE. ; 999 ;SEQUENCE (1) THE CONSTRUCT WAS EXPRESSED WITH A PURIFICATION TAG MGSDKIHHHHHHENLYFQG. THE TAG WAS REMOVED WITH TEV PROTEASE LEAVING ONLY A GLYCINE (0) FOLLOWED BY THE TARGET SEQUENCE. (2) THE SEQUENCE OF THE PROTEIN WAS NOT AVAILABLE IN THE UNP DATABASE AT THE TIME OF PROCESSING. (3) PRODUCT OF THE EXPRESSED SYNTHETIC GENE WAS BASED ON THE PREDICTED SEQUENCE OF ACCESSION ID JCVI_PEP_1096665735785 FROM THE J. CRAIG VENTER INSTITUTE. ; # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CL CL CL N N 74 EDO C1 C N N 75 EDO O1 O N N 76 EDO C2 C N N 77 EDO O2 O N N 78 EDO H11 H N N 79 EDO H12 H N N 80 EDO HO1 H N N 81 EDO H21 H N N 82 EDO H22 H N N 83 EDO HO2 H N N 84 GLN N N N N 85 GLN CA C N S 86 GLN C C N N 87 GLN O O N N 88 GLN CB C N N 89 GLN CG C N N 90 GLN CD C N N 91 GLN OE1 O N N 92 GLN NE2 N N N 93 GLN OXT O N N 94 GLN H H N N 95 GLN H2 H N N 96 GLN HA H N N 97 GLN HB2 H N N 98 GLN HB3 H N N 99 GLN HG2 H N N 100 GLN HG3 H N N 101 GLN HE21 H N N 102 GLN HE22 H N N 103 GLN HXT H N N 104 GLU N N N N 105 GLU CA C N S 106 GLU C C N N 107 GLU O O N N 108 GLU CB C N N 109 GLU CG C N N 110 GLU CD C N N 111 GLU OE1 O N N 112 GLU OE2 O N N 113 GLU OXT O N N 114 GLU H H N N 115 GLU H2 H N N 116 GLU HA H N N 117 GLU HB2 H N N 118 GLU HB3 H N N 119 GLU HG2 H N N 120 GLU HG3 H N N 121 GLU HE2 H N N 122 GLU HXT H N N 123 GLY N N N N 124 GLY CA C N N 125 GLY C C N N 126 GLY O O N N 127 GLY OXT O N N 128 GLY H H N N 129 GLY H2 H N N 130 GLY HA2 H N N 131 GLY HA3 H N N 132 GLY HXT H N N 133 HIS N N N N 134 HIS CA C N S 135 HIS C C N N 136 HIS O O N N 137 HIS CB C N N 138 HIS CG C Y N 139 HIS ND1 N Y N 140 HIS CD2 C Y N 141 HIS CE1 C Y N 142 HIS NE2 N Y N 143 HIS OXT O N N 144 HIS H H N N 145 HIS H2 H N N 146 HIS HA H N N 147 HIS HB2 H N N 148 HIS HB3 H N N 149 HIS HD1 H N N 150 HIS HD2 H N N 151 HIS HE1 H N N 152 HIS HE2 H N N 153 HIS HXT H N N 154 HOH O O N N 155 HOH H1 H N N 156 HOH H2 H N N 157 ILE N N N N 158 ILE CA C N S 159 ILE C C N N 160 ILE O O N N 161 ILE CB C N S 162 ILE CG1 C N N 163 ILE CG2 C N N 164 ILE CD1 C N N 165 ILE OXT O N N 166 ILE H H N N 167 ILE H2 H N N 168 ILE HA H N N 169 ILE HB H N N 170 ILE HG12 H N N 171 ILE HG13 H N N 172 ILE HG21 H N N 173 ILE HG22 H N N 174 ILE HG23 H N N 175 ILE HD11 H N N 176 ILE HD12 H N N 177 ILE HD13 H N N 178 ILE HXT H N N 179 LEU N N N N 180 LEU CA C N S 181 LEU C C N N 182 LEU O O N N 183 LEU CB C N N 184 LEU CG C N N 185 LEU CD1 C N N 186 LEU CD2 C N N 187 LEU OXT O N N 188 LEU H H N N 189 LEU H2 H N N 190 LEU HA H N N 191 LEU HB2 H N N 192 LEU HB3 H N N 193 LEU HG H N N 194 LEU HD11 H N N 195 LEU HD12 H N N 196 LEU HD13 H N N 197 LEU HD21 H N N 198 LEU HD22 H N N 199 LEU HD23 H N N 200 LEU HXT H N N 201 LYS N N N N 202 LYS CA C N S 203 LYS C C N N 204 LYS O O N N 205 LYS CB C N N 206 LYS CG C N N 207 LYS CD C N N 208 LYS CE C N N 209 LYS NZ N N N 210 LYS OXT O N N 211 LYS H H N N 212 LYS H2 H N N 213 LYS HA H N N 214 LYS HB2 H N N 215 LYS HB3 H N N 216 LYS HG2 H N N 217 LYS HG3 H N N 218 LYS HD2 H N N 219 LYS HD3 H N N 220 LYS HE2 H N N 221 LYS HE3 H N N 222 LYS HZ1 H N N 223 LYS HZ2 H N N 224 LYS HZ3 H N N 225 LYS HXT H N N 226 MSE N N N N 227 MSE CA C N S 228 MSE C C N N 229 MSE O O N N 230 MSE OXT O N N 231 MSE CB C N N 232 MSE CG C N N 233 MSE SE SE N N 234 MSE CE C N N 235 MSE H H N N 236 MSE H2 H N N 237 MSE HA H N N 238 MSE HXT H N N 239 MSE HB2 H N N 240 MSE HB3 H N N 241 MSE HG2 H N N 242 MSE HG3 H N N 243 MSE HE1 H N N 244 MSE HE2 H N N 245 MSE HE3 H N N 246 PHE N N N N 247 PHE CA C N S 248 PHE C C N N 249 PHE O O N N 250 PHE CB C N N 251 PHE CG C Y N 252 PHE CD1 C Y N 253 PHE CD2 C Y N 254 PHE CE1 C Y N 255 PHE CE2 C Y N 256 PHE CZ C Y N 257 PHE OXT O N N 258 PHE H H N N 259 PHE H2 H N N 260 PHE HA H N N 261 PHE HB2 H N N 262 PHE HB3 H N N 263 PHE HD1 H N N 264 PHE HD2 H N N 265 PHE HE1 H N N 266 PHE HE2 H N N 267 PHE HZ H N N 268 PHE HXT H N N 269 PRO N N N N 270 PRO CA C N S 271 PRO C C N N 272 PRO O O N N 273 PRO CB C N N 274 PRO CG C N N 275 PRO CD C N N 276 PRO OXT O N N 277 PRO H H N N 278 PRO HA H N N 279 PRO HB2 H N N 280 PRO HB3 H N N 281 PRO HG2 H N N 282 PRO HG3 H N N 283 PRO HD2 H N N 284 PRO HD3 H N N 285 PRO HXT H N N 286 SER N N N N 287 SER CA C N S 288 SER C C N N 289 SER O O N N 290 SER CB C N N 291 SER OG O N N 292 SER OXT O N N 293 SER H H N N 294 SER H2 H N N 295 SER HA H N N 296 SER HB2 H N N 297 SER HB3 H N N 298 SER HG H N N 299 SER HXT H N N 300 THR N N N N 301 THR CA C N S 302 THR C C N N 303 THR O O N N 304 THR CB C N R 305 THR OG1 O N N 306 THR CG2 C N N 307 THR OXT O N N 308 THR H H N N 309 THR H2 H N N 310 THR HA H N N 311 THR HB H N N 312 THR HG1 H N N 313 THR HG21 H N N 314 THR HG22 H N N 315 THR HG23 H N N 316 THR HXT H N N 317 TRP N N N N 318 TRP CA C N S 319 TRP C C N N 320 TRP O O N N 321 TRP CB C N N 322 TRP CG C Y N 323 TRP CD1 C Y N 324 TRP CD2 C Y N 325 TRP NE1 N Y N 326 TRP CE2 C Y N 327 TRP CE3 C Y N 328 TRP CZ2 C Y N 329 TRP CZ3 C Y N 330 TRP CH2 C Y N 331 TRP OXT O N N 332 TRP H H N N 333 TRP H2 H N N 334 TRP HA H N N 335 TRP HB2 H N N 336 TRP HB3 H N N 337 TRP HD1 H N N 338 TRP HE1 H N N 339 TRP HE3 H N N 340 TRP HZ2 H N N 341 TRP HZ3 H N N 342 TRP HH2 H N N 343 TRP HXT H N N 344 TYR N N N N 345 TYR CA C N S 346 TYR C C N N 347 TYR O O N N 348 TYR CB C N N 349 TYR CG C Y N 350 TYR CD1 C Y N 351 TYR CD2 C Y N 352 TYR CE1 C Y N 353 TYR CE2 C Y N 354 TYR CZ C Y N 355 TYR OH O N N 356 TYR OXT O N N 357 TYR H H N N 358 TYR H2 H N N 359 TYR HA H N N 360 TYR HB2 H N N 361 TYR HB3 H N N 362 TYR HD1 H N N 363 TYR HD2 H N N 364 TYR HE1 H N N 365 TYR HE2 H N N 366 TYR HH H N N 367 TYR HXT H N N 368 VAL N N N N 369 VAL CA C N S 370 VAL C C N N 371 VAL O O N N 372 VAL CB C N N 373 VAL CG1 C N N 374 VAL CG2 C N N 375 VAL OXT O N N 376 VAL H H N N 377 VAL H2 H N N 378 VAL HA H N N 379 VAL HB H N N 380 VAL HG11 H N N 381 VAL HG12 H N N 382 VAL HG13 H N N 383 VAL HG21 H N N 384 VAL HG22 H N N 385 VAL HG23 H N N 386 VAL HXT H N N 387 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 EDO C1 O1 sing N N 70 EDO C1 C2 sing N N 71 EDO C1 H11 sing N N 72 EDO C1 H12 sing N N 73 EDO O1 HO1 sing N N 74 EDO C2 O2 sing N N 75 EDO C2 H21 sing N N 76 EDO C2 H22 sing N N 77 EDO O2 HO2 sing N N 78 GLN N CA sing N N 79 GLN N H sing N N 80 GLN N H2 sing N N 81 GLN CA C sing N N 82 GLN CA CB sing N N 83 GLN CA HA sing N N 84 GLN C O doub N N 85 GLN C OXT sing N N 86 GLN CB CG sing N N 87 GLN CB HB2 sing N N 88 GLN CB HB3 sing N N 89 GLN CG CD sing N N 90 GLN CG HG2 sing N N 91 GLN CG HG3 sing N N 92 GLN CD OE1 doub N N 93 GLN CD NE2 sing N N 94 GLN NE2 HE21 sing N N 95 GLN NE2 HE22 sing N N 96 GLN OXT HXT sing N N 97 GLU N CA sing N N 98 GLU N H sing N N 99 GLU N H2 sing N N 100 GLU CA C sing N N 101 GLU CA CB sing N N 102 GLU CA HA sing N N 103 GLU C O doub N N 104 GLU C OXT sing N N 105 GLU CB CG sing N N 106 GLU CB HB2 sing N N 107 GLU CB HB3 sing N N 108 GLU CG CD sing N N 109 GLU CG HG2 sing N N 110 GLU CG HG3 sing N N 111 GLU CD OE1 doub N N 112 GLU CD OE2 sing N N 113 GLU OE2 HE2 sing N N 114 GLU OXT HXT sing N N 115 GLY N CA sing N N 116 GLY N H sing N N 117 GLY N H2 sing N N 118 GLY CA C sing N N 119 GLY CA HA2 sing N N 120 GLY CA HA3 sing N N 121 GLY C O doub N N 122 GLY C OXT sing N N 123 GLY OXT HXT sing N N 124 HIS N CA sing N N 125 HIS N H sing N N 126 HIS N H2 sing N N 127 HIS CA C sing N N 128 HIS CA CB sing N N 129 HIS CA HA sing N N 130 HIS C O doub N N 131 HIS C OXT sing N N 132 HIS CB CG sing N N 133 HIS CB HB2 sing N N 134 HIS CB HB3 sing N N 135 HIS CG ND1 sing Y N 136 HIS CG CD2 doub Y N 137 HIS ND1 CE1 doub Y N 138 HIS ND1 HD1 sing N N 139 HIS CD2 NE2 sing Y N 140 HIS CD2 HD2 sing N N 141 HIS CE1 NE2 sing Y N 142 HIS CE1 HE1 sing N N 143 HIS NE2 HE2 sing N N 144 HIS OXT HXT sing N N 145 HOH O H1 sing N N 146 HOH O H2 sing N N 147 ILE N CA sing N N 148 ILE N H sing N N 149 ILE N H2 sing N N 150 ILE CA C sing N N 151 ILE CA CB sing N N 152 ILE CA HA sing N N 153 ILE C O doub N N 154 ILE C OXT sing N N 155 ILE CB CG1 sing N N 156 ILE CB CG2 sing N N 157 ILE CB HB sing N N 158 ILE CG1 CD1 sing N N 159 ILE CG1 HG12 sing N N 160 ILE CG1 HG13 sing N N 161 ILE CG2 HG21 sing N N 162 ILE CG2 HG22 sing N N 163 ILE CG2 HG23 sing N N 164 ILE CD1 HD11 sing N N 165 ILE CD1 HD12 sing N N 166 ILE CD1 HD13 sing N N 167 ILE OXT HXT sing N N 168 LEU N CA sing N N 169 LEU N H sing N N 170 LEU N H2 sing N N 171 LEU CA C sing N N 172 LEU CA CB sing N N 173 LEU CA HA sing N N 174 LEU C O doub N N 175 LEU C OXT sing N N 176 LEU CB CG sing N N 177 LEU CB HB2 sing N N 178 LEU CB HB3 sing N N 179 LEU CG CD1 sing N N 180 LEU CG CD2 sing N N 181 LEU CG HG sing N N 182 LEU CD1 HD11 sing N N 183 LEU CD1 HD12 sing N N 184 LEU CD1 HD13 sing N N 185 LEU CD2 HD21 sing N N 186 LEU CD2 HD22 sing N N 187 LEU CD2 HD23 sing N N 188 LEU OXT HXT sing N N 189 LYS N CA sing N N 190 LYS N H sing N N 191 LYS N H2 sing N N 192 LYS CA C sing N N 193 LYS CA CB sing N N 194 LYS CA HA sing N N 195 LYS C O doub N N 196 LYS C OXT sing N N 197 LYS CB CG sing N N 198 LYS CB HB2 sing N N 199 LYS CB HB3 sing N N 200 LYS CG CD sing N N 201 LYS CG HG2 sing N N 202 LYS CG HG3 sing N N 203 LYS CD CE sing N N 204 LYS CD HD2 sing N N 205 LYS CD HD3 sing N N 206 LYS CE NZ sing N N 207 LYS CE HE2 sing N N 208 LYS CE HE3 sing N N 209 LYS NZ HZ1 sing N N 210 LYS NZ HZ2 sing N N 211 LYS NZ HZ3 sing N N 212 LYS OXT HXT sing N N 213 MSE N CA sing N N 214 MSE N H sing N N 215 MSE N H2 sing N N 216 MSE CA C sing N N 217 MSE CA CB sing N N 218 MSE CA HA sing N N 219 MSE C O doub N N 220 MSE C OXT sing N N 221 MSE OXT HXT sing N N 222 MSE CB CG sing N N 223 MSE CB HB2 sing N N 224 MSE CB HB3 sing N N 225 MSE CG SE sing N N 226 MSE CG HG2 sing N N 227 MSE CG HG3 sing N N 228 MSE SE CE sing N N 229 MSE CE HE1 sing N N 230 MSE CE HE2 sing N N 231 MSE CE HE3 sing N N 232 PHE N CA sing N N 233 PHE N H sing N N 234 PHE N H2 sing N N 235 PHE CA C sing N N 236 PHE CA CB sing N N 237 PHE CA HA sing N N 238 PHE C O doub N N 239 PHE C OXT sing N N 240 PHE CB CG sing N N 241 PHE CB HB2 sing N N 242 PHE CB HB3 sing N N 243 PHE CG CD1 doub Y N 244 PHE CG CD2 sing Y N 245 PHE CD1 CE1 sing Y N 246 PHE CD1 HD1 sing N N 247 PHE CD2 CE2 doub Y N 248 PHE CD2 HD2 sing N N 249 PHE CE1 CZ doub Y N 250 PHE CE1 HE1 sing N N 251 PHE CE2 CZ sing Y N 252 PHE CE2 HE2 sing N N 253 PHE CZ HZ sing N N 254 PHE OXT HXT sing N N 255 PRO N CA sing N N 256 PRO N CD sing N N 257 PRO N H sing N N 258 PRO CA C sing N N 259 PRO CA CB sing N N 260 PRO CA HA sing N N 261 PRO C O doub N N 262 PRO C OXT sing N N 263 PRO CB CG sing N N 264 PRO CB HB2 sing N N 265 PRO CB HB3 sing N N 266 PRO CG CD sing N N 267 PRO CG HG2 sing N N 268 PRO CG HG3 sing N N 269 PRO CD HD2 sing N N 270 PRO CD HD3 sing N N 271 PRO OXT HXT sing N N 272 SER N CA sing N N 273 SER N H sing N N 274 SER N H2 sing N N 275 SER CA C sing N N 276 SER CA CB sing N N 277 SER CA HA sing N N 278 SER C O doub N N 279 SER C OXT sing N N 280 SER CB OG sing N N 281 SER CB HB2 sing N N 282 SER CB HB3 sing N N 283 SER OG HG sing N N 284 SER OXT HXT sing N N 285 THR N CA sing N N 286 THR N H sing N N 287 THR N H2 sing N N 288 THR CA C sing N N 289 THR CA CB sing N N 290 THR CA HA sing N N 291 THR C O doub N N 292 THR C OXT sing N N 293 THR CB OG1 sing N N 294 THR CB CG2 sing N N 295 THR CB HB sing N N 296 THR OG1 HG1 sing N N 297 THR CG2 HG21 sing N N 298 THR CG2 HG22 sing N N 299 THR CG2 HG23 sing N N 300 THR OXT HXT sing N N 301 TRP N CA sing N N 302 TRP N H sing N N 303 TRP N H2 sing N N 304 TRP CA C sing N N 305 TRP CA CB sing N N 306 TRP CA HA sing N N 307 TRP C O doub N N 308 TRP C OXT sing N N 309 TRP CB CG sing N N 310 TRP CB HB2 sing N N 311 TRP CB HB3 sing N N 312 TRP CG CD1 doub Y N 313 TRP CG CD2 sing Y N 314 TRP CD1 NE1 sing Y N 315 TRP CD1 HD1 sing N N 316 TRP CD2 CE2 doub Y N 317 TRP CD2 CE3 sing Y N 318 TRP NE1 CE2 sing Y N 319 TRP NE1 HE1 sing N N 320 TRP CE2 CZ2 sing Y N 321 TRP CE3 CZ3 doub Y N 322 TRP CE3 HE3 sing N N 323 TRP CZ2 CH2 doub Y N 324 TRP CZ2 HZ2 sing N N 325 TRP CZ3 CH2 sing Y N 326 TRP CZ3 HZ3 sing N N 327 TRP CH2 HH2 sing N N 328 TRP OXT HXT sing N N 329 TYR N CA sing N N 330 TYR N H sing N N 331 TYR N H2 sing N N 332 TYR CA C sing N N 333 TYR CA CB sing N N 334 TYR CA HA sing N N 335 TYR C O doub N N 336 TYR C OXT sing N N 337 TYR CB CG sing N N 338 TYR CB HB2 sing N N 339 TYR CB HB3 sing N N 340 TYR CG CD1 doub Y N 341 TYR CG CD2 sing Y N 342 TYR CD1 CE1 sing Y N 343 TYR CD1 HD1 sing N N 344 TYR CD2 CE2 doub Y N 345 TYR CD2 HD2 sing N N 346 TYR CE1 CZ doub Y N 347 TYR CE1 HE1 sing N N 348 TYR CE2 CZ sing Y N 349 TYR CE2 HE2 sing N N 350 TYR CZ OH sing N N 351 TYR OH HH sing N N 352 TYR OXT HXT sing N N 353 VAL N CA sing N N 354 VAL N H sing N N 355 VAL N H2 sing N N 356 VAL CA C sing N N 357 VAL CA CB sing N N 358 VAL CA HA sing N N 359 VAL C O doub N N 360 VAL C OXT sing N N 361 VAL CB CG1 sing N N 362 VAL CB CG2 sing N N 363 VAL CB HB sing N N 364 VAL CG1 HG11 sing N N 365 VAL CG1 HG12 sing N N 366 VAL CG1 HG13 sing N N 367 VAL CG2 HG21 sing N N 368 VAL CG2 HG22 sing N N 369 VAL CG2 HG23 sing N N 370 VAL OXT HXT sing N N 371 # _atom_sites.entry_id 2OD4 _atom_sites.fract_transf_matrix[1][1] 0.03136 _atom_sites.fract_transf_matrix[1][2] 0.00000 _atom_sites.fract_transf_matrix[1][3] 0.00704 _atom_sites.fract_transf_matrix[2][1] 0.00000 _atom_sites.fract_transf_matrix[2][2] 0.01285 _atom_sites.fract_transf_matrix[2][3] 0.00000 _atom_sites.fract_transf_matrix[3][1] 0.00000 _atom_sites.fract_transf_matrix[3][2] 0.00000 _atom_sites.fract_transf_matrix[3][3] 0.02340 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C CL N O SE # loop_