data_2OTA # _entry.id 2OTA # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.289 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 2OTA RCSB RCSB041558 WWPDB D_1000041558 # _pdbx_database_related.db_name TargetDB _pdbx_database_related.db_id CsR4 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 2OTA _pdbx_database_status.recvd_initial_deposition_date 2007-02-07 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry Y _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Vorobiev, S.M.' 1 'Zhou, W.' 2 'Su, M.' 3 'Seetharaman, J.' 4 'Wang, H.' 5 'Janjua, H.' 6 'Cunningham, K.' 7 'Ma, L.-C.' 8 'Xiao, R.' 9 'Liu, C.' 10 'Acton, T.B.' 11 'Montelione, G.T.' 12 'Tong, L.' 13 'Hunt, J.F.' 14 'Northeast Structural Genomics Consortium (NESG)' 15 # _citation.id primary _citation.title 'Crystal structure of the UPF0352 protein CPS_2611 from Colwellia psychrerythraea. NESG target CsR4.' _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Vorobiev, S.M.' 1 primary 'Zhou, W.' 2 primary 'Su, M.' 3 primary 'Seetharaman, J.' 4 primary 'Wang, H.' 5 primary 'Janjua, H.' 6 primary 'Cunningham, K.' 7 primary 'Ma, L.-C.' 8 primary 'Liu, C.' 9 primary 'Acton, T.B.' 10 primary 'Xiao, R.' 11 primary 'Montelione, G.T.' 12 primary 'Tong, L.' 13 primary 'Hunt, J.F.' 14 # _cell.entry_id 2OTA _cell.length_a 37.739 _cell.length_b 58.470 _cell.length_c 59.650 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 2OTA _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'UPF0352 protein CPS_2611' 8698.764 2 ? ? ? ? 2 water nat water 18.015 92 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;(MSE)PIVSKYSNERVEKIIQDLLDVLVKEEVTPDLAL(MSE)CLGNAVTNIIAQVPESKRVAVVDNFTKALKQSVLEHH HHHH ; _entity_poly.pdbx_seq_one_letter_code_can MPIVSKYSNERVEKIIQDLLDVLVKEEVTPDLALMCLGNAVTNIIAQVPESKRVAVVDNFTKALKQSVLEHHHHHH _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier CsR4 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MSE n 1 2 PRO n 1 3 ILE n 1 4 VAL n 1 5 SER n 1 6 LYS n 1 7 TYR n 1 8 SER n 1 9 ASN n 1 10 GLU n 1 11 ARG n 1 12 VAL n 1 13 GLU n 1 14 LYS n 1 15 ILE n 1 16 ILE n 1 17 GLN n 1 18 ASP n 1 19 LEU n 1 20 LEU n 1 21 ASP n 1 22 VAL n 1 23 LEU n 1 24 VAL n 1 25 LYS n 1 26 GLU n 1 27 GLU n 1 28 VAL n 1 29 THR n 1 30 PRO n 1 31 ASP n 1 32 LEU n 1 33 ALA n 1 34 LEU n 1 35 MSE n 1 36 CYS n 1 37 LEU n 1 38 GLY n 1 39 ASN n 1 40 ALA n 1 41 VAL n 1 42 THR n 1 43 ASN n 1 44 ILE n 1 45 ILE n 1 46 ALA n 1 47 GLN n 1 48 VAL n 1 49 PRO n 1 50 GLU n 1 51 SER n 1 52 LYS n 1 53 ARG n 1 54 VAL n 1 55 ALA n 1 56 VAL n 1 57 VAL n 1 58 ASP n 1 59 ASN n 1 60 PHE n 1 61 THR n 1 62 LYS n 1 63 ALA n 1 64 LEU n 1 65 LYS n 1 66 GLN n 1 67 SER n 1 68 VAL n 1 69 LEU n 1 70 GLU n 1 71 HIS n 1 72 HIS n 1 73 HIS n 1 74 HIS n 1 75 HIS n 1 76 HIS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus Colwellia _entity_src_gen.pdbx_gene_src_gene CPS_2611 _entity_src_gen.gene_src_species 'Colwellia psychrerythraea' _entity_src_gen.gene_src_strain 34H _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Colwellia psychrerythraea' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 167879 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc BAA-681 _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)+Magic' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type Plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET21 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Y2611_COLP3 _struct_ref.pdbx_db_accession Q481E4 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code MPIVSKYSNERVEKIIQDLLDVLVKEEVTPDLALMCLGNAVTNIIAQVPESKRVAVVDNFTKALKQSV _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 2OTA A 1 ? 68 ? Q481E4 1 ? 68 ? 1 68 2 1 2OTA B 1 ? 68 ? Q481E4 1 ? 68 ? 1 68 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 2OTA MSE A 1 ? UNP Q481E4 MET 1 'MODIFIED RESIDUE' 1 1 1 2OTA MSE A 35 ? UNP Q481E4 MET 35 'MODIFIED RESIDUE' 35 2 1 2OTA LEU A 69 ? UNP Q481E4 ? ? 'EXPRESSION TAG' 69 3 1 2OTA GLU A 70 ? UNP Q481E4 ? ? 'EXPRESSION TAG' 70 4 1 2OTA HIS A 71 ? UNP Q481E4 ? ? 'EXPRESSION TAG' 71 5 1 2OTA HIS A 72 ? UNP Q481E4 ? ? 'EXPRESSION TAG' 72 6 1 2OTA HIS A 73 ? UNP Q481E4 ? ? 'EXPRESSION TAG' 73 7 1 2OTA HIS A 74 ? UNP Q481E4 ? ? 'EXPRESSION TAG' 74 8 1 2OTA HIS A 75 ? UNP Q481E4 ? ? 'EXPRESSION TAG' 75 9 1 2OTA HIS A 76 ? UNP Q481E4 ? ? 'EXPRESSION TAG' 76 10 2 2OTA MSE B 1 ? UNP Q481E4 MET 1 'MODIFIED RESIDUE' 1 11 2 2OTA MSE B 35 ? UNP Q481E4 MET 35 'MODIFIED RESIDUE' 35 12 2 2OTA LEU B 69 ? UNP Q481E4 ? ? 'EXPRESSION TAG' 69 13 2 2OTA GLU B 70 ? UNP Q481E4 ? ? 'EXPRESSION TAG' 70 14 2 2OTA HIS B 71 ? UNP Q481E4 ? ? 'EXPRESSION TAG' 71 15 2 2OTA HIS B 72 ? UNP Q481E4 ? ? 'EXPRESSION TAG' 72 16 2 2OTA HIS B 73 ? UNP Q481E4 ? ? 'EXPRESSION TAG' 73 17 2 2OTA HIS B 74 ? UNP Q481E4 ? ? 'EXPRESSION TAG' 74 18 2 2OTA HIS B 75 ? UNP Q481E4 ? ? 'EXPRESSION TAG' 75 19 2 2OTA HIS B 76 ? UNP Q481E4 ? ? 'EXPRESSION TAG' 76 20 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 2OTA _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 1.89 _exptl_crystal.density_percent_sol 34.95 _exptl_crystal.description 'THE STRUCTURE FACTOR FILE CONTAINS FRIEDEL PAIRS' _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 6.5 _exptl_crystal_grow.pdbx_details '25 % PEG 3350, 0.2 M Ammonium sulfate, 0.1 M Bis-Tris, pH 6.5, VAPOR DIFFUSION, HANGING DROP, temperature 293K' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 4' _diffrn_detector.pdbx_collection_date 2007-01-31 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol MAD _diffrn_radiation.pdbx_scattering_type x-ray # loop_ _diffrn_radiation_wavelength.id _diffrn_radiation_wavelength.wavelength _diffrn_radiation_wavelength.wt 1 0.97903 1.0 2 0.97921 1.0 3 0.96862 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'NSLS BEAMLINE X4A' _diffrn_source.pdbx_synchrotron_site NSLS _diffrn_source.pdbx_synchrotron_beamline X4A _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list '0.97903, 0.97921, 0.96862' # _reflns.entry_id 2OTA _reflns.observed_criterion_sigma_I 0.0 _reflns.observed_criterion_sigma_F 0.0 _reflns.d_resolution_low 30.0 _reflns.d_resolution_high 2.2 _reflns.number_obs 12604 _reflns.number_all 12604 _reflns.percent_possible_obs 96.7 _reflns.pdbx_Rmerge_I_obs 0.047 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 50.9 _reflns.B_iso_Wilson_estimate 8.7 _reflns.pdbx_redundancy 6.9 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 2.20 _reflns_shell.d_res_low 2.28 _reflns_shell.percent_possible_all 81.4 _reflns_shell.Rmerge_I_obs 0.079 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 21.1 _reflns_shell.pdbx_redundancy 4.3 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 1053 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 2OTA _refine.ls_number_reflns_obs 12302 _refine.ls_number_reflns_all 12604 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 2.0 _refine.pdbx_data_cutoff_high_absF 462891.36 _refine.pdbx_data_cutoff_low_absF 0.000000 _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 29.83 _refine.ls_d_res_high 2.20 _refine.ls_percent_reflns_obs 95.1 _refine.ls_R_factor_obs 0.235 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.235 _refine.ls_R_factor_R_free 0.261 _refine.ls_R_factor_R_free_error 0.011 _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.0 _refine.ls_number_reflns_R_free 611 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean 19.6 _refine.aniso_B[1][1] -1.97 _refine.aniso_B[2][2] -1.81 _refine.aniso_B[3][3] 3.78 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details 'FLAT MODEL' _refine.solvent_model_param_ksol 0.376731 _refine.solvent_model_param_bsol 58.2151 _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'THE FRIEDEL PAIRS WERE USED FOR PHASING' _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct MAD _refine.pdbx_isotropic_thermal_model RESTRAINED _refine.pdbx_stereochemistry_target_values 'Engh & Huber' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 2OTA _refine_analyze.Luzzati_coordinate_error_obs 0.27 _refine_analyze.Luzzati_sigma_a_obs 0.06 _refine_analyze.Luzzati_d_res_low_obs 5.00 _refine_analyze.Luzzati_coordinate_error_free 0.32 _refine_analyze.Luzzati_sigma_a_free 0.21 _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.pdbx_Luzzati_d_res_high_obs ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 960 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 92 _refine_hist.number_atoms_total 1052 _refine_hist.d_res_high 2.20 _refine_hist.d_res_low 29.83 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function c_bond_d 0.007 ? ? ? 'X-RAY DIFFRACTION' ? c_bond_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_bond_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg 1.3 ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d 17.8 ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d 1.26 ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_mcbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? c_mcangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? c_scbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? c_scangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 6 _refine_ls_shell.d_res_high 2.20 _refine_ls_shell.d_res_low 2.34 _refine_ls_shell.number_reflns_R_work 1634 _refine_ls_shell.R_factor_R_work 0.223 _refine_ls_shell.percent_reflns_obs 80.4 _refine_ls_shell.R_factor_R_free 0.284 _refine_ls_shell.R_factor_R_free_error 0.030 _refine_ls_shell.percent_reflns_R_free 5.2 _refine_ls_shell.number_reflns_R_free 89 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # loop_ _pdbx_xplor_file.serial_no _pdbx_xplor_file.param_file _pdbx_xplor_file.topol_file _pdbx_xplor_file.pdbx_refine_id 1 protein_rep.param protein.top 'X-RAY DIFFRACTION' 2 water_rep.param water.top 'X-RAY DIFFRACTION' 3 ion.param ion.top 'X-RAY DIFFRACTION' # _struct.entry_id 2OTA _struct.title 'Crystal structure of the UPF0352 protein CPS_2611 from Colwellia psychrerythraea. NESG target CsR4.' _struct.pdbx_descriptor 'UPF0352 protein CPS_2611' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2OTA _struct_keywords.pdbx_keywords 'STRUCTURAL GENOMICS, UNKNOWN FUNCTION' _struct_keywords.text ;NESG, Y2611_COLP3, UPF0352, CPS_2611, Structural Genomics, PSI-2, Protein Structure Initiative, Northeast Structural Genomics Consortium, UNKNOWN FUNCTION ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 2 ? # _struct_biol.id 1 _struct_biol.details 'Dimer in solution' # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 SER A 8 ? GLU A 26 ? SER A 8 GLU A 26 1 ? 19 HELX_P HELX_P2 2 THR A 29 ? ALA A 46 ? THR A 29 ALA A 46 1 ? 18 HELX_P HELX_P3 3 GLN A 47 ? VAL A 48 ? GLN A 47 VAL A 48 5 ? 2 HELX_P HELX_P4 4 PRO A 49 ? SER A 51 ? PRO A 49 SER A 51 5 ? 3 HELX_P HELX_P5 5 LYS A 52 ? HIS A 71 ? LYS A 52 HIS A 71 1 ? 20 HELX_P HELX_P6 6 GLU B 10 ? GLU B 26 ? GLU B 10 GLU B 26 1 ? 17 HELX_P HELX_P7 7 THR B 29 ? ALA B 46 ? THR B 29 ALA B 46 1 ? 18 HELX_P HELX_P8 8 PRO B 49 ? LEU B 69 ? PRO B 49 LEU B 69 1 ? 21 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale1 covale ? ? A LEU 34 C ? ? ? 1_555 A MSE 35 N ? ? A LEU 34 A MSE 35 1_555 ? ? ? ? ? ? ? 1.326 ? covale2 covale ? ? A MSE 35 C ? ? ? 1_555 A CYS 36 N ? ? A MSE 35 A CYS 36 1_555 ? ? ? ? ? ? ? 1.325 ? covale3 covale ? ? B LEU 34 C ? ? ? 1_555 B MSE 35 N ? ? B LEU 34 B MSE 35 1_555 ? ? ? ? ? ? ? 1.325 ? covale4 covale ? ? B MSE 35 C ? ? ? 1_555 B CYS 36 N ? ? B MSE 35 B CYS 36 1_555 ? ? ? ? ? ? ? 1.327 ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # _database_PDB_matrix.entry_id 2OTA _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 2OTA _atom_sites.fract_transf_matrix[1][1] 0.026498 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.017103 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.016764 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MSE 1 1 ? ? ? A . n A 1 2 PRO 2 2 ? ? ? A . n A 1 3 ILE 3 3 ? ? ? A . n A 1 4 VAL 4 4 ? ? ? A . n A 1 5 SER 5 5 ? ? ? A . n A 1 6 LYS 6 6 ? ? ? A . n A 1 7 TYR 7 7 7 TYR TYR A . n A 1 8 SER 8 8 8 SER SER A . n A 1 9 ASN 9 9 9 ASN ALA A . n A 1 10 GLU 10 10 10 GLU ALA A . n A 1 11 ARG 11 11 11 ARG ARG A . n A 1 12 VAL 12 12 12 VAL VAL A . n A 1 13 GLU 13 13 13 GLU GLU A . n A 1 14 LYS 14 14 14 LYS ALA A . n A 1 15 ILE 15 15 15 ILE ILE A . n A 1 16 ILE 16 16 16 ILE ILE A . n A 1 17 GLN 17 17 17 GLN GLN A . n A 1 18 ASP 18 18 18 ASP ASP A . n A 1 19 LEU 19 19 19 LEU LEU A . n A 1 20 LEU 20 20 20 LEU LEU A . n A 1 21 ASP 21 21 21 ASP ASP A . n A 1 22 VAL 22 22 22 VAL VAL A . n A 1 23 LEU 23 23 23 LEU LEU A . n A 1 24 VAL 24 24 24 VAL VAL A . n A 1 25 LYS 25 25 25 LYS LYS A . n A 1 26 GLU 26 26 26 GLU GLU A . n A 1 27 GLU 27 27 27 GLU GLU A . n A 1 28 VAL 28 28 28 VAL VAL A . n A 1 29 THR 29 29 29 THR THR A . n A 1 30 PRO 30 30 30 PRO PRO A . n A 1 31 ASP 31 31 31 ASP ASP A . n A 1 32 LEU 32 32 32 LEU LEU A . n A 1 33 ALA 33 33 33 ALA ALA A . n A 1 34 LEU 34 34 34 LEU LEU A . n A 1 35 MSE 35 35 35 MSE MSE A . n A 1 36 CYS 36 36 36 CYS CYS A . n A 1 37 LEU 37 37 37 LEU LEU A . n A 1 38 GLY 38 38 38 GLY GLY A . n A 1 39 ASN 39 39 39 ASN ASN A . n A 1 40 ALA 40 40 40 ALA ALA A . n A 1 41 VAL 41 41 41 VAL VAL A . n A 1 42 THR 42 42 42 THR THR A . n A 1 43 ASN 43 43 43 ASN ASN A . n A 1 44 ILE 44 44 44 ILE ILE A . n A 1 45 ILE 45 45 45 ILE ILE A . n A 1 46 ALA 46 46 46 ALA ALA A . n A 1 47 GLN 47 47 47 GLN GLN A . n A 1 48 VAL 48 48 48 VAL VAL A . n A 1 49 PRO 49 49 49 PRO PRO A . n A 1 50 GLU 50 50 50 GLU GLU A . n A 1 51 SER 51 51 51 SER SER A . n A 1 52 LYS 52 52 52 LYS LYS A . n A 1 53 ARG 53 53 53 ARG ARG A . n A 1 54 VAL 54 54 54 VAL VAL A . n A 1 55 ALA 55 55 55 ALA ALA A . n A 1 56 VAL 56 56 56 VAL VAL A . n A 1 57 VAL 57 57 57 VAL VAL A . n A 1 58 ASP 58 58 58 ASP ASP A . n A 1 59 ASN 59 59 59 ASN ASN A . n A 1 60 PHE 60 60 60 PHE PHE A . n A 1 61 THR 61 61 61 THR THR A . n A 1 62 LYS 62 62 62 LYS LYS A . n A 1 63 ALA 63 63 63 ALA ALA A . n A 1 64 LEU 64 64 64 LEU LEU A . n A 1 65 LYS 65 65 65 LYS ALA A . n A 1 66 GLN 66 66 66 GLN ALA A . n A 1 67 SER 67 67 67 SER ALA A . n A 1 68 VAL 68 68 68 VAL VAL A . n A 1 69 LEU 69 69 69 LEU LEU A . n A 1 70 GLU 70 70 70 GLU GLU A . n A 1 71 HIS 71 71 71 HIS HIS A . n A 1 72 HIS 72 72 72 HIS ALA A . n A 1 73 HIS 73 73 73 HIS HIS A . n A 1 74 HIS 74 74 ? ? ? A . n A 1 75 HIS 75 75 ? ? ? A . n A 1 76 HIS 76 76 ? ? ? A . n B 1 1 MSE 1 1 ? ? ? B . n B 1 2 PRO 2 2 ? ? ? B . n B 1 3 ILE 3 3 ? ? ? B . n B 1 4 VAL 4 4 ? ? ? B . n B 1 5 SER 5 5 ? ? ? B . n B 1 6 LYS 6 6 ? ? ? B . n B 1 7 TYR 7 7 ? ? ? B . n B 1 8 SER 8 8 ? ? ? B . n B 1 9 ASN 9 9 9 ASN ALA B . n B 1 10 GLU 10 10 10 GLU ALA B . n B 1 11 ARG 11 11 11 ARG ARG B . n B 1 12 VAL 12 12 12 VAL VAL B . n B 1 13 GLU 13 13 13 GLU GLU B . n B 1 14 LYS 14 14 14 LYS ALA B . n B 1 15 ILE 15 15 15 ILE ILE B . n B 1 16 ILE 16 16 16 ILE ILE B . n B 1 17 GLN 17 17 17 GLN GLN B . n B 1 18 ASP 18 18 18 ASP ASP B . n B 1 19 LEU 19 19 19 LEU LEU B . n B 1 20 LEU 20 20 20 LEU LEU B . n B 1 21 ASP 21 21 21 ASP ASP B . n B 1 22 VAL 22 22 22 VAL VAL B . n B 1 23 LEU 23 23 23 LEU LEU B . n B 1 24 VAL 24 24 24 VAL VAL B . n B 1 25 LYS 25 25 25 LYS LYS B . n B 1 26 GLU 26 26 26 GLU GLU B . n B 1 27 GLU 27 27 27 GLU GLU B . n B 1 28 VAL 28 28 28 VAL VAL B . n B 1 29 THR 29 29 29 THR THR B . n B 1 30 PRO 30 30 30 PRO PRO B . n B 1 31 ASP 31 31 31 ASP ASP B . n B 1 32 LEU 32 32 32 LEU LEU B . n B 1 33 ALA 33 33 33 ALA ALA B . n B 1 34 LEU 34 34 34 LEU LEU B . n B 1 35 MSE 35 35 35 MSE MSE B . n B 1 36 CYS 36 36 36 CYS CYS B . n B 1 37 LEU 37 37 37 LEU LEU B . n B 1 38 GLY 38 38 38 GLY GLY B . n B 1 39 ASN 39 39 39 ASN ASN B . n B 1 40 ALA 40 40 40 ALA ALA B . n B 1 41 VAL 41 41 41 VAL VAL B . n B 1 42 THR 42 42 42 THR THR B . n B 1 43 ASN 43 43 43 ASN ASN B . n B 1 44 ILE 44 44 44 ILE ILE B . n B 1 45 ILE 45 45 45 ILE ILE B . n B 1 46 ALA 46 46 46 ALA ALA B . n B 1 47 GLN 47 47 47 GLN GLN B . n B 1 48 VAL 48 48 48 VAL VAL B . n B 1 49 PRO 49 49 49 PRO PRO B . n B 1 50 GLU 50 50 50 GLU GLU B . n B 1 51 SER 51 51 51 SER SER B . n B 1 52 LYS 52 52 52 LYS LYS B . n B 1 53 ARG 53 53 53 ARG ARG B . n B 1 54 VAL 54 54 54 VAL VAL B . n B 1 55 ALA 55 55 55 ALA ALA B . n B 1 56 VAL 56 56 56 VAL VAL B . n B 1 57 VAL 57 57 57 VAL VAL B . n B 1 58 ASP 58 58 58 ASP ASP B . n B 1 59 ASN 59 59 59 ASN ASN B . n B 1 60 PHE 60 60 60 PHE PHE B . n B 1 61 THR 61 61 61 THR THR B . n B 1 62 LYS 62 62 62 LYS LYS B . n B 1 63 ALA 63 63 63 ALA ALA B . n B 1 64 LEU 64 64 64 LEU LEU B . n B 1 65 LYS 65 65 65 LYS LYS B . n B 1 66 GLN 66 66 66 GLN GLN B . n B 1 67 SER 67 67 67 SER ALA B . n B 1 68 VAL 68 68 68 VAL VAL B . n B 1 69 LEU 69 69 69 LEU LEU B . n B 1 70 GLU 70 70 ? ? ? B . n B 1 71 HIS 71 71 ? ? ? B . n B 1 72 HIS 72 72 ? ? ? B . n B 1 73 HIS 73 73 ? ? ? B . n B 1 74 HIS 74 74 ? ? ? B . n B 1 75 HIS 75 75 ? ? ? B . n B 1 76 HIS 76 76 ? ? ? B . n # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name 'PSI, Protein Structure Initiative' _pdbx_SG_project.full_name_of_center 'Northeast Structural Genomics Consortium' _pdbx_SG_project.initial_of_center NESG # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 HOH 1 77 101 HOH WAT A . C 2 HOH 2 78 110 HOH WAT A . C 2 HOH 3 79 111 HOH WAT A . C 2 HOH 4 80 112 HOH WAT A . C 2 HOH 5 81 114 HOH WAT A . C 2 HOH 6 82 115 HOH WAT A . C 2 HOH 7 83 117 HOH WAT A . C 2 HOH 8 84 121 HOH WAT A . C 2 HOH 9 85 122 HOH WAT A . C 2 HOH 10 86 123 HOH WAT A . C 2 HOH 11 87 126 HOH WAT A . C 2 HOH 12 88 129 HOH WAT A . C 2 HOH 13 89 131 HOH WAT A . C 2 HOH 14 90 132 HOH WAT A . C 2 HOH 15 91 136 HOH WAT A . C 2 HOH 16 92 139 HOH WAT A . C 2 HOH 17 93 146 HOH WAT A . C 2 HOH 18 94 147 HOH WAT A . C 2 HOH 19 95 148 HOH WAT A . C 2 HOH 20 96 154 HOH WAT A . C 2 HOH 21 97 158 HOH WAT A . C 2 HOH 22 98 159 HOH WAT A . C 2 HOH 23 99 160 HOH WAT A . C 2 HOH 24 100 162 HOH WAT A . C 2 HOH 25 101 165 HOH WAT A . C 2 HOH 26 102 166 HOH WAT A . C 2 HOH 27 103 170 HOH WAT A . C 2 HOH 28 104 173 HOH WAT A . C 2 HOH 29 105 175 HOH WAT A . C 2 HOH 30 106 176 HOH WAT A . C 2 HOH 31 107 177 HOH WAT A . C 2 HOH 32 108 178 HOH WAT A . C 2 HOH 33 109 180 HOH WAT A . C 2 HOH 34 110 182 HOH WAT A . C 2 HOH 35 111 184 HOH WAT A . C 2 HOH 36 112 186 HOH WAT A . C 2 HOH 37 113 187 HOH WAT A . C 2 HOH 38 114 188 HOH WAT A . C 2 HOH 39 115 189 HOH WAT A . C 2 HOH 40 116 191 HOH WAT A . C 2 HOH 41 117 195 HOH WAT A . C 2 HOH 42 118 198 HOH WAT A . C 2 HOH 43 119 200 HOH WAT A . C 2 HOH 44 120 201 HOH WAT A . C 2 HOH 45 121 204 HOH WAT A . C 2 HOH 46 122 206 HOH WAT A . C 2 HOH 47 123 207 HOH WAT A . C 2 HOH 48 124 209 HOH WAT A . C 2 HOH 49 125 212 HOH WAT A . C 2 HOH 50 126 214 HOH WAT A . C 2 HOH 51 127 215 HOH WAT A . C 2 HOH 52 128 216 HOH WAT A . C 2 HOH 53 129 217 HOH WAT A . C 2 HOH 54 130 220 HOH WAT A . C 2 HOH 55 131 221 HOH WAT A . C 2 HOH 56 132 223 HOH WAT A . D 2 HOH 1 77 102 HOH WAT B . D 2 HOH 2 78 104 HOH WAT B . D 2 HOH 3 79 105 HOH WAT B . D 2 HOH 4 80 109 HOH WAT B . D 2 HOH 5 81 113 HOH WAT B . D 2 HOH 6 82 118 HOH WAT B . D 2 HOH 7 83 125 HOH WAT B . D 2 HOH 8 84 128 HOH WAT B . D 2 HOH 9 85 130 HOH WAT B . D 2 HOH 10 86 134 HOH WAT B . D 2 HOH 11 87 138 HOH WAT B . D 2 HOH 12 88 142 HOH WAT B . D 2 HOH 13 89 143 HOH WAT B . D 2 HOH 14 90 144 HOH WAT B . D 2 HOH 15 91 151 HOH WAT B . D 2 HOH 16 92 152 HOH WAT B . D 2 HOH 17 93 153 HOH WAT B . D 2 HOH 18 94 156 HOH WAT B . D 2 HOH 19 95 157 HOH WAT B . D 2 HOH 20 96 163 HOH WAT B . D 2 HOH 21 97 164 HOH WAT B . D 2 HOH 22 98 168 HOH WAT B . D 2 HOH 23 99 169 HOH WAT B . D 2 HOH 24 100 171 HOH WAT B . D 2 HOH 25 101 174 HOH WAT B . D 2 HOH 26 102 181 HOH WAT B . D 2 HOH 27 103 190 HOH WAT B . D 2 HOH 28 104 192 HOH WAT B . D 2 HOH 29 105 193 HOH WAT B . D 2 HOH 30 106 202 HOH WAT B . D 2 HOH 31 107 208 HOH WAT B . D 2 HOH 32 108 211 HOH WAT B . D 2 HOH 33 109 213 HOH WAT B . D 2 HOH 34 110 218 HOH WAT B . D 2 HOH 35 111 219 HOH WAT B . D 2 HOH 36 112 222 HOH WAT B . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 35 A MSE 35 ? MET SELENOMETHIONINE 2 B MSE 35 B MSE 35 ? MET SELENOMETHIONINE # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA,PQS _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 4090 ? 1 MORE -51 ? 1 'SSA (A^2)' 7290 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2007-02-20 2 'Structure model' 1 1 2007-10-01 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2017-10-18 5 'Structure model' 1 4 2018-01-24 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Derived calculations' 3 3 'Structure model' 'Source and taxonomy' 4 3 'Structure model' 'Version format compliance' 5 4 'Structure model' 'Refinement description' 6 5 'Structure model' 'Database references' 7 5 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' software 2 5 'Structure model' audit_author 3 5 'Structure model' citation_author # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_software.name' 2 5 'Structure model' '_audit_author.name' 3 5 'Structure model' '_citation_author.name' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal CNS refinement 1.1 ? 1 HKL-2000 'data collection' . ? 2 DENZO 'data reduction' . ? 3 SCALEPACK 'data scaling' . ? 4 SnB phasing . ? 5 RESOLVE phasing . ? 6 # _pdbx_database_remark.id 300 _pdbx_database_remark.text ; BIOMOLECULE: 1 THIS ENTRY CONTAINS THE CRYSTALLOGRAPHIC ASYMMETRIC UNIT WHICH CONSISTS OF 2 CHAIN(S). SEE REMARK 350 FOR INFORMATION ON GENERATING THE BIOLOGICAL MOLECULE(S). AUTHORS STATE THAT THEIR LIGHT SCATTERING DATA CONFIRM THAT THE PROTEIN IS A DIMER IN SOLUTION. ; # _pdbx_validate_rmsd_angle.id 1 _pdbx_validate_rmsd_angle.PDB_model_num 1 _pdbx_validate_rmsd_angle.auth_atom_id_1 N _pdbx_validate_rmsd_angle.auth_asym_id_1 B _pdbx_validate_rmsd_angle.auth_comp_id_1 GLU _pdbx_validate_rmsd_angle.auth_seq_id_1 10 _pdbx_validate_rmsd_angle.PDB_ins_code_1 ? _pdbx_validate_rmsd_angle.label_alt_id_1 ? _pdbx_validate_rmsd_angle.auth_atom_id_2 CA _pdbx_validate_rmsd_angle.auth_asym_id_2 B _pdbx_validate_rmsd_angle.auth_comp_id_2 GLU _pdbx_validate_rmsd_angle.auth_seq_id_2 10 _pdbx_validate_rmsd_angle.PDB_ins_code_2 ? _pdbx_validate_rmsd_angle.label_alt_id_2 ? _pdbx_validate_rmsd_angle.auth_atom_id_3 CB _pdbx_validate_rmsd_angle.auth_asym_id_3 B _pdbx_validate_rmsd_angle.auth_comp_id_3 GLU _pdbx_validate_rmsd_angle.auth_seq_id_3 10 _pdbx_validate_rmsd_angle.PDB_ins_code_3 ? _pdbx_validate_rmsd_angle.label_alt_id_3 ? _pdbx_validate_rmsd_angle.angle_value 124.87 _pdbx_validate_rmsd_angle.angle_target_value 110.60 _pdbx_validate_rmsd_angle.angle_deviation 14.27 _pdbx_validate_rmsd_angle.angle_standard_deviation 1.80 _pdbx_validate_rmsd_angle.linker_flag N # _pdbx_validate_peptide_omega.id 1 _pdbx_validate_peptide_omega.PDB_model_num 1 _pdbx_validate_peptide_omega.auth_comp_id_1 ASN _pdbx_validate_peptide_omega.auth_asym_id_1 B _pdbx_validate_peptide_omega.auth_seq_id_1 9 _pdbx_validate_peptide_omega.PDB_ins_code_1 ? _pdbx_validate_peptide_omega.label_alt_id_1 ? _pdbx_validate_peptide_omega.auth_comp_id_2 GLU _pdbx_validate_peptide_omega.auth_asym_id_2 B _pdbx_validate_peptide_omega.auth_seq_id_2 10 _pdbx_validate_peptide_omega.PDB_ins_code_2 ? _pdbx_validate_peptide_omega.label_alt_id_2 ? _pdbx_validate_peptide_omega.omega 144.46 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A ASN 9 ? CG ? A ASN 9 CG 2 1 Y 1 A ASN 9 ? OD1 ? A ASN 9 OD1 3 1 Y 1 A ASN 9 ? ND2 ? A ASN 9 ND2 4 1 Y 1 A GLU 10 ? CG ? A GLU 10 CG 5 1 Y 1 A GLU 10 ? CD ? A GLU 10 CD 6 1 Y 1 A GLU 10 ? OE1 ? A GLU 10 OE1 7 1 Y 1 A GLU 10 ? OE2 ? A GLU 10 OE2 8 1 Y 1 A LYS 14 ? CG ? A LYS 14 CG 9 1 Y 1 A LYS 14 ? CD ? A LYS 14 CD 10 1 Y 1 A LYS 14 ? CE ? A LYS 14 CE 11 1 Y 1 A LYS 14 ? NZ ? A LYS 14 NZ 12 1 Y 1 A LYS 65 ? CG ? A LYS 65 CG 13 1 Y 1 A LYS 65 ? CD ? A LYS 65 CD 14 1 Y 1 A LYS 65 ? CE ? A LYS 65 CE 15 1 Y 1 A LYS 65 ? NZ ? A LYS 65 NZ 16 1 Y 1 A GLN 66 ? CG ? A GLN 66 CG 17 1 Y 1 A GLN 66 ? CD ? A GLN 66 CD 18 1 Y 1 A GLN 66 ? OE1 ? A GLN 66 OE1 19 1 Y 1 A GLN 66 ? NE2 ? A GLN 66 NE2 20 1 Y 1 A SER 67 ? OG ? A SER 67 OG 21 1 Y 1 A HIS 72 ? CG ? A HIS 72 CG 22 1 Y 1 A HIS 72 ? ND1 ? A HIS 72 ND1 23 1 Y 1 A HIS 72 ? CD2 ? A HIS 72 CD2 24 1 Y 1 A HIS 72 ? CE1 ? A HIS 72 CE1 25 1 Y 1 A HIS 72 ? NE2 ? A HIS 72 NE2 26 1 Y 1 B ASN 9 ? CG ? B ASN 9 CG 27 1 Y 1 B ASN 9 ? OD1 ? B ASN 9 OD1 28 1 Y 1 B ASN 9 ? ND2 ? B ASN 9 ND2 29 1 Y 1 B GLU 10 ? CG ? B GLU 10 CG 30 1 Y 1 B GLU 10 ? CD ? B GLU 10 CD 31 1 Y 1 B GLU 10 ? OE1 ? B GLU 10 OE1 32 1 Y 1 B GLU 10 ? OE2 ? B GLU 10 OE2 33 1 Y 1 B LYS 14 ? CG ? B LYS 14 CG 34 1 Y 1 B LYS 14 ? CD ? B LYS 14 CD 35 1 Y 1 B LYS 14 ? CE ? B LYS 14 CE 36 1 Y 1 B LYS 14 ? NZ ? B LYS 14 NZ 37 1 Y 1 B SER 67 ? OG ? B SER 67 OG # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MSE 1 ? A MSE 1 2 1 Y 1 A PRO 2 ? A PRO 2 3 1 Y 1 A ILE 3 ? A ILE 3 4 1 Y 1 A VAL 4 ? A VAL 4 5 1 Y 1 A SER 5 ? A SER 5 6 1 Y 1 A LYS 6 ? A LYS 6 7 1 Y 1 A HIS 74 ? A HIS 74 8 1 Y 1 A HIS 75 ? A HIS 75 9 1 Y 1 A HIS 76 ? A HIS 76 10 1 Y 1 B MSE 1 ? B MSE 1 11 1 Y 1 B PRO 2 ? B PRO 2 12 1 Y 1 B ILE 3 ? B ILE 3 13 1 Y 1 B VAL 4 ? B VAL 4 14 1 Y 1 B SER 5 ? B SER 5 15 1 Y 1 B LYS 6 ? B LYS 6 16 1 Y 1 B TYR 7 ? B TYR 7 17 1 Y 1 B SER 8 ? B SER 8 18 1 Y 1 B GLU 70 ? B GLU 70 19 1 Y 1 B HIS 71 ? B HIS 71 20 1 Y 1 B HIS 72 ? B HIS 72 21 1 Y 1 B HIS 73 ? B HIS 73 22 1 Y 1 B HIS 74 ? B HIS 74 23 1 Y 1 B HIS 75 ? B HIS 75 24 1 Y 1 B HIS 76 ? B HIS 76 # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH #