data_2OU6 # _entry.id 2OU6 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.365 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2OU6 pdb_00002ou6 10.2210/pdb2ou6/pdb RCSB RCSB041589 ? ? WWPDB D_1000041589 ? ? # _pdbx_database_related.db_name TargetDB _pdbx_database_related.db_id 370329 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.SG_entry Y _pdbx_database_status.entry_id 2OU6 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2007-02-09 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # _audit_author.name 'Joint Center for Structural Genomics (JCSG)' _audit_author.pdbx_ordinal 1 # _citation.id primary _citation.title 'Crystal structure of hypothetical protein (NP_294789.1) from Deinococcus radiodurans at 1.80 A resolution' _citation.journal_abbrev 'To be published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # _citation_author.citation_id primary _citation_author.name 'Joint Center for Structural Genomics (JCSG)' _citation_author.ordinal 1 _citation_author.identifier_ORCID ? # _cell.entry_id 2OU6 _cell.length_a 57.933 _cell.length_b 57.933 _cell.length_c 250.773 _cell.angle_alpha 90.000 _cell.angle_beta 90.000 _cell.angle_gamma 120.000 _cell.pdbx_unique_axis ? _cell.Z_PDB 12 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 2OU6 _symmetry.Int_Tables_number 179 _symmetry.space_group_name_H-M 'P 65 2 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Hypothetical protein' 21128.984 1 ? ? ? ? 2 non-polymer syn 'NICKEL (II) ION' 58.693 1 ? ? ? ? 3 non-polymer syn 'SULFATE ION' 96.063 2 ? ? ? ? 4 non-polymer syn GLYCEROL 92.094 2 ? ? ? ? 5 water nat water 18.015 266 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;G(MSE)PTFNPELHAQTLNSERAYFVQPDADPAFTPHIGALVE(MSE)LTYARLTTLQAVEGLPEDQLWATAPGFANSIG TLLAHIAAVERVYHVLSFQGRDVTPEDDGAAYWGLT(MSE)GKEGTAPARLPTLDELRAELADARAETLRVFAAKDDAWL AEPLGPGWANQHWAWFHV(MSE)EDEVNHRGQLRLLRQVLAPEEGG ; _entity_poly.pdbx_seq_one_letter_code_can ;GMPTFNPELHAQTLNSERAYFVQPDADPAFTPHIGALVEMLTYARLTTLQAVEGLPEDQLWATAPGFANSIGTLLAHIAA VERVYHVLSFQGRDVTPEDDGAAYWGLTMGKEGTAPARLPTLDELRAELADARAETLRVFAAKDDAWLAEPLGPGWANQH WAWFHVMEDEVNHRGQLRLLRQVLAPEEGG ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier 370329 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 MSE n 1 3 PRO n 1 4 THR n 1 5 PHE n 1 6 ASN n 1 7 PRO n 1 8 GLU n 1 9 LEU n 1 10 HIS n 1 11 ALA n 1 12 GLN n 1 13 THR n 1 14 LEU n 1 15 ASN n 1 16 SER n 1 17 GLU n 1 18 ARG n 1 19 ALA n 1 20 TYR n 1 21 PHE n 1 22 VAL n 1 23 GLN n 1 24 PRO n 1 25 ASP n 1 26 ALA n 1 27 ASP n 1 28 PRO n 1 29 ALA n 1 30 PHE n 1 31 THR n 1 32 PRO n 1 33 HIS n 1 34 ILE n 1 35 GLY n 1 36 ALA n 1 37 LEU n 1 38 VAL n 1 39 GLU n 1 40 MSE n 1 41 LEU n 1 42 THR n 1 43 TYR n 1 44 ALA n 1 45 ARG n 1 46 LEU n 1 47 THR n 1 48 THR n 1 49 LEU n 1 50 GLN n 1 51 ALA n 1 52 VAL n 1 53 GLU n 1 54 GLY n 1 55 LEU n 1 56 PRO n 1 57 GLU n 1 58 ASP n 1 59 GLN n 1 60 LEU n 1 61 TRP n 1 62 ALA n 1 63 THR n 1 64 ALA n 1 65 PRO n 1 66 GLY n 1 67 PHE n 1 68 ALA n 1 69 ASN n 1 70 SER n 1 71 ILE n 1 72 GLY n 1 73 THR n 1 74 LEU n 1 75 LEU n 1 76 ALA n 1 77 HIS n 1 78 ILE n 1 79 ALA n 1 80 ALA n 1 81 VAL n 1 82 GLU n 1 83 ARG n 1 84 VAL n 1 85 TYR n 1 86 HIS n 1 87 VAL n 1 88 LEU n 1 89 SER n 1 90 PHE n 1 91 GLN n 1 92 GLY n 1 93 ARG n 1 94 ASP n 1 95 VAL n 1 96 THR n 1 97 PRO n 1 98 GLU n 1 99 ASP n 1 100 ASP n 1 101 GLY n 1 102 ALA n 1 103 ALA n 1 104 TYR n 1 105 TRP n 1 106 GLY n 1 107 LEU n 1 108 THR n 1 109 MSE n 1 110 GLY n 1 111 LYS n 1 112 GLU n 1 113 GLY n 1 114 THR n 1 115 ALA n 1 116 PRO n 1 117 ALA n 1 118 ARG n 1 119 LEU n 1 120 PRO n 1 121 THR n 1 122 LEU n 1 123 ASP n 1 124 GLU n 1 125 LEU n 1 126 ARG n 1 127 ALA n 1 128 GLU n 1 129 LEU n 1 130 ALA n 1 131 ASP n 1 132 ALA n 1 133 ARG n 1 134 ALA n 1 135 GLU n 1 136 THR n 1 137 LEU n 1 138 ARG n 1 139 VAL n 1 140 PHE n 1 141 ALA n 1 142 ALA n 1 143 LYS n 1 144 ASP n 1 145 ASP n 1 146 ALA n 1 147 TRP n 1 148 LEU n 1 149 ALA n 1 150 GLU n 1 151 PRO n 1 152 LEU n 1 153 GLY n 1 154 PRO n 1 155 GLY n 1 156 TRP n 1 157 ALA n 1 158 ASN n 1 159 GLN n 1 160 HIS n 1 161 TRP n 1 162 ALA n 1 163 TRP n 1 164 PHE n 1 165 HIS n 1 166 VAL n 1 167 MSE n 1 168 GLU n 1 169 ASP n 1 170 GLU n 1 171 VAL n 1 172 ASN n 1 173 HIS n 1 174 ARG n 1 175 GLY n 1 176 GLN n 1 177 LEU n 1 178 ARG n 1 179 LEU n 1 180 LEU n 1 181 ARG n 1 182 GLN n 1 183 VAL n 1 184 LEU n 1 185 ALA n 1 186 PRO n 1 187 GLU n 1 188 GLU n 1 189 GLY n 1 190 GLY n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus Deinococcus _entity_src_gen.pdbx_gene_src_gene 'NP_294789.1, DR_1065' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain 'DSM 20539, IFO 15346, LMG 4051, NCIB 9279, R1' _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Deinococcus radiodurans' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 1299 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc 13939 _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain HK100 _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type Plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name speedET _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q9RVG4_DEIRA _struct_ref.pdbx_db_accession Q9RVG4 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MPTFNPELHAQTLNSERAYFVQPDADPAFTPHIGALVEMLTYARLTTLQAVEGLPEDQLWATAPGFANSIGTLLAHIAAV ERVYHVLSFQGRDVTPEDDGAAYWGLTMGKEGTAPARLPTLDELRAELADARAETLRVFAAKDDAWLAEPLGPGWANQHW AWFHVMEDEVNHRGQLRLLRQVLAPEEGG ; _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 2OU6 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 2 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 190 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q9RVG4 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 189 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 189 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 2OU6 GLY A 1 ? UNP Q9RVG4 ? ? 'expression tag' 0 1 1 2OU6 MSE A 2 ? UNP Q9RVG4 MET 1 'modified residue' 1 2 1 2OU6 MSE A 40 ? UNP Q9RVG4 MET 39 'modified residue' 39 3 1 2OU6 MSE A 109 ? UNP Q9RVG4 MET 108 'modified residue' 108 4 1 2OU6 MSE A 167 ? UNP Q9RVG4 MET 166 'modified residue' 166 5 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 GOL non-polymer . GLYCEROL 'GLYCERIN; PROPANE-1,2,3-TRIOL' 'C3 H8 O3' 92.094 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 NI non-polymer . 'NICKEL (II) ION' ? 'Ni 2' 58.693 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 SO4 non-polymer . 'SULFATE ION' ? 'O4 S -2' 96.063 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.crystals_number 1 _exptl.method 'X-RAY DIFFRACTION' _exptl.entry_id 2OU6 # _exptl_crystal.id 1 _exptl_crystal.density_Matthews 2.87 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 57.19 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.pH 6.0 _exptl_crystal_grow.temp 277 _exptl_crystal_grow.pdbx_details 'NANODROP, 1.6M (NH4)2SO4, 0.1M MES pH 6.0, VAPOR DIFFUSION, SITTING DROP, temperature 277K' _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'MARMOSAIC 325 mm CCD' _diffrn_detector.details 'Flat mirror (vertical focusing)' _diffrn_detector.pdbx_collection_date 2007-02-01 # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Single crystal Si(111) bent (horizontal focusing)' _diffrn_radiation.pdbx_diffrn_protocol MAD _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_scattering_type x-ray # loop_ _diffrn_radiation_wavelength.id _diffrn_radiation_wavelength.wavelength _diffrn_radiation_wavelength.wt 1 0.97905 1.0 2 0.97932 1.0 3 0.91837 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.pdbx_synchrotron_beamline BL11-1 _diffrn_source.type 'SSRL BEAMLINE BL11-1' _diffrn_source.pdbx_wavelength_list '0.97905, 0.97932, 0.91837' _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_site SSRL # _reflns.entry_id 2OU6 _reflns.d_resolution_high 1.800 _reflns.d_resolution_low 125.000 _reflns.number_obs 22207 _reflns.pdbx_Rmerge_I_obs 0.07 _reflns.pdbx_netI_over_sigmaI 7.100 _reflns.pdbx_Rsym_value 0.07 _reflns.pdbx_redundancy 6.900 _reflns.percent_possible_obs 91.100 _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.number_all ? _reflns.B_iso_Wilson_estimate 21.72 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.number_measured_obs _reflns_shell.number_measured_all _reflns_shell.number_unique_obs _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_redundancy _reflns_shell.percent_possible_obs _reflns_shell.number_unique_all _reflns_shell.percent_possible_all _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id 1.80 1.85 ? 2678 ? 0.268 2.5 0.268 ? 2.60 ? 1047 61.40 1 1 1.85 1.90 ? 3766 ? 0.237 2.7 0.237 ? 3.00 ? 1244 74.10 2 1 1.90 1.95 ? 5100 ? 0.219 2.8 0.219 ? 3.80 ? 1340 82.00 3 1 1.95 2.01 ? 7047 ? 0.203 3.1 0.203 ? 5.20 ? 1364 83.70 4 1 2.01 2.08 ? 7020 ? 0.16 3.9 0.16 ? 5.10 ? 1372 87.50 5 1 2.08 2.15 ? 6977 ? 0.133 4.5 0.133 ? 5.00 ? 1383 92.00 6 1 2.15 2.23 ? 7278 ? 0.119 5.1 0.119 ? 5.20 ? 1404 94.90 7 1 2.23 2.32 ? 7344 ? 0.108 5.4 0.108 ? 5.30 ? 1383 98.40 8 1 2.32 2.43 ? 7663 ? 0.096 6.2 0.096 ? 5.60 ? 1362 99.60 9 1 2.43 2.55 ? 7769 ? 0.095 6.3 0.095 ? 6.00 ? 1293 99.90 10 1 2.55 2.68 ? 8380 ? 0.093 6.4 0.093 ? 6.60 ? 1262 100.00 11 1 2.68 2.85 ? 8669 ? 0.086 7.0 0.086 ? 7.30 ? 1192 100.00 12 1 2.85 3.04 ? 9090 ? 0.077 7.8 0.077 ? 7.90 ? 1145 100.00 13 1 3.04 3.29 ? 9158 ? 0.066 8.9 0.066 ? 8.80 ? 1043 100.00 14 1 3.29 3.60 ? 10158 ? 0.062 9.6 0.062 ? 10.20 ? 999 100.00 15 1 3.60 4.02 ? 11380 ? 0.062 9.3 0.062 ? 12.60 ? 901 100.00 16 1 4.02 4.65 ? 11680 ? 0.061 10.2 0.061 ? 14.40 ? 809 100.00 17 1 4.65 5.69 ? 9936 ? 0.061 9.7 0.061 ? 14.00 ? 711 100.00 18 1 5.69 8.05 ? 7754 ? 0.066 8.6 0.066 ? 13.30 ? 581 100.00 19 1 8.05 125.43 ? 3843 ? 0.058 10.2 0.058 ? 10.30 ? 372 98.30 20 1 # _refine.entry_id 2OU6 _refine.ls_d_res_high 1.800 _refine.ls_d_res_low 125.000 _refine.pdbx_ls_sigma_F 0.00 _refine.ls_percent_reflns_obs 91.060 _refine.ls_number_reflns_obs 22101 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details RANDOM _refine.details ;1. HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS. 2. A MET-INHIBITION PROTOCOL WAS USED FOR SELENOMETHIONINE INCORPORATION DURING PROTEIN EXPRESSION. THE OCCUPANCY OF THE SE ATOMS IN THE MSE RESIDUES WAS REDUCED TO 0.75 FOR THE REDUCED SCATTERING POWER DUE TO PARTIAL S-MET INCORPORATION. 3. ATOM RECORD CONTAINS RESIDUAL B FACTORS ONLY. 4. NI MODELED BASED ON GEOMETRY AND HOMOLOGS. 5. SO4 AND GOL MODELED BASED ON CRYSTALLIZATION CONDITIONS. 6. THERE IS UNMODELED DENSITY NEAR PHE 120 AND TRP 160. ; _refine.ls_R_factor_all 0.157 _refine.ls_R_factor_R_work 0.155 _refine.ls_R_factor_R_free 0.188 _refine.ls_percent_reflns_R_free 5.100 _refine.ls_number_reflns_R_free 1137 _refine.B_iso_mean 19.024 _refine.aniso_B[1][1] -1.320 _refine.aniso_B[2][2] -1.320 _refine.aniso_B[3][3] 1.980 _refine.aniso_B[1][2] -0.660 _refine.aniso_B[1][3] 0.000 _refine.aniso_B[2][3] 0.000 _refine.correlation_coeff_Fo_to_Fc 0.962 _refine.correlation_coeff_Fo_to_Fc_free 0.944 _refine.pdbx_overall_ESU_R 0.103 _refine.pdbx_overall_ESU_R_Free 0.103 _refine.overall_SU_ML 0.056 _refine.overall_SU_B 3.232 _refine.solvent_model_details MASK _refine.pdbx_solvent_vdw_probe_radii 1.200 _refine.pdbx_solvent_ion_probe_radii 0.800 _refine.pdbx_solvent_shrinkage_radii 0.800 _refine.pdbx_method_to_determine_struct MAD _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD WITH PHASES' _refine.pdbx_ls_sigma_I ? _refine.ls_number_reflns_all ? _refine.ls_R_factor_obs 0.157 _refine.ls_redundancy_reflns_obs ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_starting_model ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.pdbx_isotropic_thermal_model ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag 'LIKELY RESIDUAL' _refine.pdbx_diffrn_id 1 _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1428 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 23 _refine_hist.number_atoms_solvent 266 _refine_hist.number_atoms_total 1717 _refine_hist.d_res_high 1.800 _refine_hist.d_res_low 125.000 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 1517 0.015 0.022 ? 'X-RAY DIFFRACTION' ? r_bond_other_d 1354 0.001 0.020 ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 2083 1.548 1.947 ? 'X-RAY DIFFRACTION' ? r_angle_other_deg 3130 0.912 3.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 192 5.626 5.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 75 36.358 23.867 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 217 11.829 15.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 11 15.484 15.000 ? 'X-RAY DIFFRACTION' ? r_chiral_restr 227 0.102 0.200 ? 'X-RAY DIFFRACTION' ? r_gen_planes_refined 1718 0.008 0.020 ? 'X-RAY DIFFRACTION' ? r_gen_planes_other 315 0.001 0.020 ? 'X-RAY DIFFRACTION' ? r_nbd_refined 322 0.217 0.200 ? 'X-RAY DIFFRACTION' ? r_nbd_other 1293 0.185 0.200 ? 'X-RAY DIFFRACTION' ? r_nbtor_refined 754 0.181 0.200 ? 'X-RAY DIFFRACTION' ? r_nbtor_other 805 0.087 0.200 ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 201 0.161 0.200 ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 12 0.136 0.200 ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other 49 0.303 0.200 ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 11 0.089 0.200 ? 'X-RAY DIFFRACTION' ? r_mcbond_it 998 2.020 3.000 ? 'X-RAY DIFFRACTION' ? r_mcbond_other 373 0.505 3.000 ? 'X-RAY DIFFRACTION' ? r_mcangle_it 1489 2.609 5.000 ? 'X-RAY DIFFRACTION' ? r_scbond_it 653 4.621 8.000 ? 'X-RAY DIFFRACTION' ? r_scangle_it 589 6.492 11.000 ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.d_res_high 1.800 _refine_ls_shell.d_res_low 1.847 _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.percent_reflns_obs 60.710 _refine_ls_shell.number_reflns_R_work 973 _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_R_work 0.175 _refine_ls_shell.R_factor_R_free 0.251 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 73 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.number_reflns_all ? _refine_ls_shell.number_reflns_obs 1046 _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 2OU6 _struct.title 'Crystal structure of a putative metalloenzyme of the duf664 family (dr_1065) from deinococcus radiodurans at 1.80 A resolution' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.text 'Structural genomics, Joint Center for Structural Genomics, JCSG, Protein Structure Initiative, PSI-2, metal binding protein' _struct_keywords.pdbx_keywords 'METAL BINDING PROTEIN' _struct_keywords.entry_id 2OU6 # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 3 ? E N N 4 ? F N N 4 ? G N N 5 ? # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ASN A 6 ? HIS A 10 ? ASN A 5 HIS A 9 5 ? 5 HELX_P HELX_P2 2 SER A 16 ? PHE A 21 ? SER A 15 PHE A 20 5 ? 6 HELX_P HELX_P3 3 THR A 31 ? GLU A 53 ? THR A 30 GLU A 52 1 ? 23 HELX_P HELX_P4 4 PRO A 56 ? LEU A 60 ? PRO A 55 LEU A 59 5 ? 5 HELX_P HELX_P5 5 SER A 70 ? PHE A 90 ? SER A 69 PHE A 89 1 ? 21 HELX_P HELX_P6 6 ASP A 100 ? THR A 108 ? ASP A 99 THR A 107 1 ? 9 HELX_P HELX_P7 7 THR A 121 ? ALA A 141 ? THR A 120 ALA A 140 1 ? 21 HELX_P HELX_P8 8 ASP A 144 ? ALA A 149 ? ASP A 143 ALA A 148 1 ? 6 HELX_P HELX_P9 9 ASN A 158 ? ALA A 185 ? ASN A 157 ALA A 184 1 ? 28 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A GLU 39 C ? ? ? 1_555 A MSE 40 N ? ? A GLU 38 A MSE 39 1_555 ? ? ? ? ? ? ? 1.321 ? ? covale2 covale both ? A MSE 40 C ? ? ? 1_555 A LEU 41 N ? ? A MSE 39 A LEU 40 1_555 ? ? ? ? ? ? ? 1.330 ? ? covale3 covale both ? A THR 108 C ? ? ? 1_555 A MSE 109 N ? ? A THR 107 A MSE 108 1_555 ? ? ? ? ? ? ? 1.313 ? ? covale4 covale both ? A MSE 109 C ? ? ? 1_555 A GLY 110 N ? ? A MSE 108 A GLY 109 1_555 ? ? ? ? ? ? ? 1.325 ? ? covale5 covale both ? A VAL 166 C ? ? ? 1_555 A MSE 167 N ? ? A VAL 165 A MSE 166 1_555 ? ? ? ? ? ? ? 1.325 ? ? covale6 covale both ? A MSE 167 C ? ? ? 1_555 A GLU 168 N ? ? A MSE 166 A GLU 167 1_555 ? ? ? ? ? ? ? 1.320 ? ? metalc1 metalc ? ? A HIS 77 NE2 ? ? ? 1_555 B NI . NI ? ? A HIS 76 A NI 300 1_555 ? ? ? ? ? ? ? 2.089 ? ? metalc2 metalc ? ? A ASP 169 OD2 ? ? ? 1_555 B NI . NI ? ? A ASP 168 A NI 300 1_555 ? ? ? ? ? ? ? 2.080 ? ? metalc3 metalc ? ? A HIS 173 NE2 ? ? ? 1_555 B NI . NI ? ? A HIS 172 A NI 300 1_555 ? ? ? ? ? ? ? 2.079 ? ? metalc4 metalc ? ? B NI . NI ? ? ? 1_555 G HOH . O ? ? A NI 300 A HOH 403 1_555 ? ? ? ? ? ? ? 2.208 ? ? metalc5 metalc ? ? B NI . NI ? ? ? 1_555 G HOH . O ? ? A NI 300 A HOH 436 1_555 ? ? ? ? ? ? ? 2.185 ? ? metalc6 metalc ? ? B NI . NI ? ? ? 1_555 G HOH . O ? ? A NI 300 A HOH 449 1_555 ? ? ? ? ? ? ? 2.357 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? metalc ? ? # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A NI 300 ? 6 'BINDING SITE FOR RESIDUE NI A 300' AC2 Software A SO4 301 ? 6 'BINDING SITE FOR RESIDUE SO4 A 301' AC3 Software A SO4 302 ? 9 'BINDING SITE FOR RESIDUE SO4 A 302' AC4 Software A GOL 303 ? 5 'BINDING SITE FOR RESIDUE GOL A 303' AC5 Software A GOL 304 ? 3 'BINDING SITE FOR RESIDUE GOL A 304' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 6 HIS A 77 ? HIS A 76 . ? 1_555 ? 2 AC1 6 ASP A 169 ? ASP A 168 . ? 1_555 ? 3 AC1 6 HIS A 173 ? HIS A 172 . ? 1_555 ? 4 AC1 6 HOH G . ? HOH A 403 . ? 1_555 ? 5 AC1 6 HOH G . ? HOH A 436 . ? 1_555 ? 6 AC1 6 HOH G . ? HOH A 449 . ? 1_555 ? 7 AC2 6 PRO A 116 ? PRO A 115 . ? 1_555 ? 8 AC2 6 ALA A 117 ? ALA A 116 . ? 1_555 ? 9 AC2 6 LYS A 143 ? LYS A 142 . ? 8_565 ? 10 AC2 6 HOH G . ? HOH A 337 . ? 1_555 ? 11 AC2 6 HOH G . ? HOH A 377 . ? 1_555 ? 12 AC2 6 HOH G . ? HOH A 541 . ? 8_565 ? 13 AC3 9 ASN A 172 ? ASN A 171 . ? 1_555 ? 14 AC3 9 HIS A 173 ? HIS A 172 . ? 1_555 ? 15 AC3 9 GLN A 176 ? GLN A 175 . ? 1_555 ? 16 AC3 9 ARG A 178 ? ARG A 177 . ? 8_675 ? 17 AC3 9 HOH G . ? HOH A 402 . ? 8_675 ? 18 AC3 9 HOH G . ? HOH A 403 . ? 1_555 ? 19 AC3 9 HOH G . ? HOH A 409 . ? 1_555 ? 20 AC3 9 HOH G . ? HOH A 449 . ? 1_555 ? 21 AC3 9 HOH G . ? HOH A 477 . ? 8_675 ? 22 AC4 5 THR A 73 ? THR A 72 . ? 1_555 ? 23 AC4 5 TRP A 105 ? TRP A 104 . ? 1_555 ? 24 AC4 5 HOH G . ? HOH A 363 . ? 1_555 ? 25 AC4 5 HOH G . ? HOH A 388 . ? 1_555 ? 26 AC4 5 HOH G . ? HOH A 532 . ? 1_555 ? 27 AC5 3 VAL A 84 ? VAL A 83 . ? 1_555 ? 28 AC5 3 TYR A 85 ? TYR A 84 . ? 1_555 ? 29 AC5 3 HIS A 165 ? HIS A 164 . ? 1_555 ? # _database_PDB_matrix.entry_id 2OU6 _database_PDB_matrix.origx[1][1] 1.00000 _database_PDB_matrix.origx[1][2] 0.00000 _database_PDB_matrix.origx[1][3] 0.00000 _database_PDB_matrix.origx[2][1] 0.00000 _database_PDB_matrix.origx[2][2] 1.00000 _database_PDB_matrix.origx[2][3] 0.00000 _database_PDB_matrix.origx[3][1] 0.00000 _database_PDB_matrix.origx[3][2] 0.00000 _database_PDB_matrix.origx[3][3] 1.00000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 2OU6 _atom_sites.fract_transf_matrix[1][1] 0.01726 _atom_sites.fract_transf_matrix[1][2] 0.00997 _atom_sites.fract_transf_matrix[1][3] 0.00000 _atom_sites.fract_transf_matrix[2][1] 0.00000 _atom_sites.fract_transf_matrix[2][2] 0.01993 _atom_sites.fract_transf_matrix[2][3] 0.00000 _atom_sites.fract_transf_matrix[3][1] 0.00000 _atom_sites.fract_transf_matrix[3][2] 0.00000 _atom_sites.fract_transf_matrix[3][3] 0.00399 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N NI O S SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 0 ? ? ? A . n A 1 2 MSE 2 1 ? ? ? A . n A 1 3 PRO 3 2 2 PRO PRO A . n A 1 4 THR 4 3 3 THR THR A . n A 1 5 PHE 5 4 4 PHE PHE A . n A 1 6 ASN 6 5 5 ASN ASN A . n A 1 7 PRO 7 6 6 PRO PRO A . n A 1 8 GLU 8 7 7 GLU GLU A . n A 1 9 LEU 9 8 8 LEU LEU A . n A 1 10 HIS 10 9 9 HIS HIS A . n A 1 11 ALA 11 10 10 ALA ALA A . n A 1 12 GLN 12 11 11 GLN GLN A . n A 1 13 THR 13 12 12 THR THR A . n A 1 14 LEU 14 13 13 LEU LEU A . n A 1 15 ASN 15 14 14 ASN ASN A . n A 1 16 SER 16 15 15 SER SER A . n A 1 17 GLU 17 16 16 GLU GLU A . n A 1 18 ARG 18 17 17 ARG ARG A . n A 1 19 ALA 19 18 18 ALA ALA A . n A 1 20 TYR 20 19 19 TYR TYR A . n A 1 21 PHE 21 20 20 PHE PHE A . n A 1 22 VAL 22 21 21 VAL VAL A . n A 1 23 GLN 23 22 22 GLN GLN A . n A 1 24 PRO 24 23 23 PRO PRO A . n A 1 25 ASP 25 24 24 ASP ASP A . n A 1 26 ALA 26 25 25 ALA ALA A . n A 1 27 ASP 27 26 26 ASP ASP A . n A 1 28 PRO 28 27 27 PRO PRO A . n A 1 29 ALA 29 28 28 ALA ALA A . n A 1 30 PHE 30 29 29 PHE PHE A . n A 1 31 THR 31 30 30 THR THR A . n A 1 32 PRO 32 31 31 PRO PRO A . n A 1 33 HIS 33 32 32 HIS HIS A . n A 1 34 ILE 34 33 33 ILE ILE A . n A 1 35 GLY 35 34 34 GLY GLY A . n A 1 36 ALA 36 35 35 ALA ALA A . n A 1 37 LEU 37 36 36 LEU LEU A . n A 1 38 VAL 38 37 37 VAL VAL A . n A 1 39 GLU 39 38 38 GLU GLU A . n A 1 40 MSE 40 39 39 MSE MSE A . n A 1 41 LEU 41 40 40 LEU LEU A . n A 1 42 THR 42 41 41 THR THR A . n A 1 43 TYR 43 42 42 TYR TYR A . n A 1 44 ALA 44 43 43 ALA ALA A . n A 1 45 ARG 45 44 44 ARG ARG A . n A 1 46 LEU 46 45 45 LEU LEU A . n A 1 47 THR 47 46 46 THR THR A . n A 1 48 THR 48 47 47 THR THR A . n A 1 49 LEU 49 48 48 LEU LEU A . n A 1 50 GLN 50 49 49 GLN GLN A . n A 1 51 ALA 51 50 50 ALA ALA A . n A 1 52 VAL 52 51 51 VAL VAL A . n A 1 53 GLU 53 52 52 GLU GLU A . n A 1 54 GLY 54 53 53 GLY GLY A . n A 1 55 LEU 55 54 54 LEU LEU A . n A 1 56 PRO 56 55 55 PRO PRO A . n A 1 57 GLU 57 56 56 GLU GLU A . n A 1 58 ASP 58 57 57 ASP ASP A . n A 1 59 GLN 59 58 58 GLN GLN A . n A 1 60 LEU 60 59 59 LEU LEU A . n A 1 61 TRP 61 60 60 TRP TRP A . n A 1 62 ALA 62 61 61 ALA ALA A . n A 1 63 THR 63 62 62 THR THR A . n A 1 64 ALA 64 63 63 ALA ALA A . n A 1 65 PRO 65 64 64 PRO PRO A . n A 1 66 GLY 66 65 65 GLY GLY A . n A 1 67 PHE 67 66 66 PHE PHE A . n A 1 68 ALA 68 67 67 ALA ALA A . n A 1 69 ASN 69 68 68 ASN ASN A . n A 1 70 SER 70 69 69 SER SER A . n A 1 71 ILE 71 70 70 ILE ILE A . n A 1 72 GLY 72 71 71 GLY GLY A . n A 1 73 THR 73 72 72 THR THR A . n A 1 74 LEU 74 73 73 LEU LEU A . n A 1 75 LEU 75 74 74 LEU LEU A . n A 1 76 ALA 76 75 75 ALA ALA A . n A 1 77 HIS 77 76 76 HIS HIS A . n A 1 78 ILE 78 77 77 ILE ILE A . n A 1 79 ALA 79 78 78 ALA ALA A . n A 1 80 ALA 80 79 79 ALA ALA A . n A 1 81 VAL 81 80 80 VAL VAL A . n A 1 82 GLU 82 81 81 GLU GLU A . n A 1 83 ARG 83 82 82 ARG ARG A . n A 1 84 VAL 84 83 83 VAL VAL A . n A 1 85 TYR 85 84 84 TYR TYR A . n A 1 86 HIS 86 85 85 HIS HIS A . n A 1 87 VAL 87 86 86 VAL VAL A . n A 1 88 LEU 88 87 87 LEU LEU A . n A 1 89 SER 89 88 88 SER SER A . n A 1 90 PHE 90 89 89 PHE PHE A . n A 1 91 GLN 91 90 90 GLN GLN A . n A 1 92 GLY 92 91 91 GLY GLY A . n A 1 93 ARG 93 92 92 ARG ARG A . n A 1 94 ASP 94 93 93 ASP ASP A . n A 1 95 VAL 95 94 94 VAL VAL A . n A 1 96 THR 96 95 95 THR THR A . n A 1 97 PRO 97 96 96 PRO PRO A . n A 1 98 GLU 98 97 97 GLU GLU A . n A 1 99 ASP 99 98 98 ASP ASP A . n A 1 100 ASP 100 99 99 ASP ASP A . n A 1 101 GLY 101 100 100 GLY GLY A . n A 1 102 ALA 102 101 101 ALA ALA A . n A 1 103 ALA 103 102 102 ALA ALA A . n A 1 104 TYR 104 103 103 TYR TYR A . n A 1 105 TRP 105 104 104 TRP TRP A . n A 1 106 GLY 106 105 105 GLY GLY A . n A 1 107 LEU 107 106 106 LEU LEU A . n A 1 108 THR 108 107 107 THR THR A . n A 1 109 MSE 109 108 108 MSE MSE A . n A 1 110 GLY 110 109 109 GLY GLY A . n A 1 111 LYS 111 110 110 LYS LYS A . n A 1 112 GLU 112 111 111 GLU GLU A . n A 1 113 GLY 113 112 112 GLY GLY A . n A 1 114 THR 114 113 113 THR THR A . n A 1 115 ALA 115 114 114 ALA ALA A . n A 1 116 PRO 116 115 115 PRO PRO A . n A 1 117 ALA 117 116 116 ALA ALA A . n A 1 118 ARG 118 117 117 ARG ARG A . n A 1 119 LEU 119 118 118 LEU LEU A . n A 1 120 PRO 120 119 119 PRO PRO A . n A 1 121 THR 121 120 120 THR THR A . n A 1 122 LEU 122 121 121 LEU LEU A . n A 1 123 ASP 123 122 122 ASP ASP A . n A 1 124 GLU 124 123 123 GLU GLU A . n A 1 125 LEU 125 124 124 LEU LEU A . n A 1 126 ARG 126 125 125 ARG ARG A . n A 1 127 ALA 127 126 126 ALA ALA A . n A 1 128 GLU 128 127 127 GLU GLU A . n A 1 129 LEU 129 128 128 LEU LEU A . n A 1 130 ALA 130 129 129 ALA ALA A . n A 1 131 ASP 131 130 130 ASP ASP A . n A 1 132 ALA 132 131 131 ALA ALA A . n A 1 133 ARG 133 132 132 ARG ARG A . n A 1 134 ALA 134 133 133 ALA ALA A . n A 1 135 GLU 135 134 134 GLU GLU A . n A 1 136 THR 136 135 135 THR THR A . n A 1 137 LEU 137 136 136 LEU LEU A . n A 1 138 ARG 138 137 137 ARG ARG A . n A 1 139 VAL 139 138 138 VAL VAL A . n A 1 140 PHE 140 139 139 PHE PHE A . n A 1 141 ALA 141 140 140 ALA ALA A . n A 1 142 ALA 142 141 141 ALA ALA A . n A 1 143 LYS 143 142 142 LYS LYS A . n A 1 144 ASP 144 143 143 ASP ASP A . n A 1 145 ASP 145 144 144 ASP ASP A . n A 1 146 ALA 146 145 145 ALA ALA A . n A 1 147 TRP 147 146 146 TRP TRP A . n A 1 148 LEU 148 147 147 LEU LEU A . n A 1 149 ALA 149 148 148 ALA ALA A . n A 1 150 GLU 150 149 149 GLU GLU A . n A 1 151 PRO 151 150 150 PRO PRO A . n A 1 152 LEU 152 151 151 LEU LEU A . n A 1 153 GLY 153 152 152 GLY GLY A . n A 1 154 PRO 154 153 153 PRO PRO A . n A 1 155 GLY 155 154 154 GLY GLY A . n A 1 156 TRP 156 155 155 TRP TRP A . n A 1 157 ALA 157 156 156 ALA ALA A . n A 1 158 ASN 158 157 157 ASN ASN A . n A 1 159 GLN 159 158 158 GLN GLN A . n A 1 160 HIS 160 159 159 HIS HIS A . n A 1 161 TRP 161 160 160 TRP TRP A . n A 1 162 ALA 162 161 161 ALA ALA A . n A 1 163 TRP 163 162 162 TRP TRP A . n A 1 164 PHE 164 163 163 PHE PHE A . n A 1 165 HIS 165 164 164 HIS HIS A . n A 1 166 VAL 166 165 165 VAL VAL A . n A 1 167 MSE 167 166 166 MSE MSE A . n A 1 168 GLU 168 167 167 GLU GLU A . n A 1 169 ASP 169 168 168 ASP ASP A . n A 1 170 GLU 170 169 169 GLU GLU A . n A 1 171 VAL 171 170 170 VAL VAL A . n A 1 172 ASN 172 171 171 ASN ASN A . n A 1 173 HIS 173 172 172 HIS HIS A . n A 1 174 ARG 174 173 173 ARG ARG A . n A 1 175 GLY 175 174 174 GLY GLY A . n A 1 176 GLN 176 175 175 GLN GLN A . n A 1 177 LEU 177 176 176 LEU LEU A . n A 1 178 ARG 178 177 177 ARG ARG A . n A 1 179 LEU 179 178 178 LEU LEU A . n A 1 180 LEU 180 179 179 LEU LEU A . n A 1 181 ARG 181 180 180 ARG ARG A . n A 1 182 GLN 182 181 181 GLN GLN A . n A 1 183 VAL 183 182 182 VAL VAL A . n A 1 184 LEU 184 183 183 LEU LEU A . n A 1 185 ALA 185 184 184 ALA ALA A . n A 1 186 PRO 186 185 ? ? ? A . n A 1 187 GLU 187 186 ? ? ? A . n A 1 188 GLU 188 187 ? ? ? A . n A 1 189 GLY 189 188 ? ? ? A . n A 1 190 GLY 190 189 ? ? ? A . n # _pdbx_SG_project.project_name 'PSI, Protein Structure Initiative' _pdbx_SG_project.full_name_of_center 'Joint Center for Structural Genomics' _pdbx_SG_project.id 1 _pdbx_SG_project.initial_of_center JCSG # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 NI 1 300 300 NI NI A . C 3 SO4 1 301 1 SO4 SO4 A . D 3 SO4 1 302 2 SO4 SO4 A . E 4 GOL 1 303 3 GOL GOL A . F 4 GOL 1 304 4 GOL GOL A . G 5 HOH 1 305 5 HOH HOH A . G 5 HOH 2 306 6 HOH HOH A . G 5 HOH 3 307 7 HOH HOH A . G 5 HOH 4 308 8 HOH HOH A . G 5 HOH 5 309 9 HOH HOH A . G 5 HOH 6 310 10 HOH HOH A . G 5 HOH 7 311 11 HOH HOH A . G 5 HOH 8 312 12 HOH HOH A . G 5 HOH 9 313 13 HOH HOH A . G 5 HOH 10 314 14 HOH HOH A . G 5 HOH 11 315 15 HOH HOH A . G 5 HOH 12 316 16 HOH HOH A . G 5 HOH 13 317 17 HOH HOH A . G 5 HOH 14 318 18 HOH HOH A . G 5 HOH 15 319 19 HOH HOH A . G 5 HOH 16 320 20 HOH HOH A . G 5 HOH 17 321 21 HOH HOH A . G 5 HOH 18 322 22 HOH HOH A . G 5 HOH 19 323 23 HOH HOH A . G 5 HOH 20 324 24 HOH HOH A . G 5 HOH 21 325 25 HOH HOH A . G 5 HOH 22 326 26 HOH HOH A . G 5 HOH 23 327 27 HOH HOH A . G 5 HOH 24 328 28 HOH HOH A . G 5 HOH 25 329 29 HOH HOH A . G 5 HOH 26 330 30 HOH HOH A . G 5 HOH 27 331 31 HOH HOH A . G 5 HOH 28 332 32 HOH HOH A . G 5 HOH 29 333 33 HOH HOH A . G 5 HOH 30 334 34 HOH HOH A . G 5 HOH 31 335 35 HOH HOH A . G 5 HOH 32 336 36 HOH HOH A . G 5 HOH 33 337 37 HOH HOH A . G 5 HOH 34 338 38 HOH HOH A . G 5 HOH 35 339 39 HOH HOH A . G 5 HOH 36 340 40 HOH HOH A . G 5 HOH 37 341 41 HOH HOH A . G 5 HOH 38 342 42 HOH HOH A . G 5 HOH 39 343 43 HOH HOH A . G 5 HOH 40 344 44 HOH HOH A . G 5 HOH 41 345 45 HOH HOH A . G 5 HOH 42 346 46 HOH HOH A . G 5 HOH 43 347 47 HOH HOH A . G 5 HOH 44 348 48 HOH HOH A . G 5 HOH 45 349 49 HOH HOH A . G 5 HOH 46 350 50 HOH HOH A . G 5 HOH 47 351 51 HOH HOH A . G 5 HOH 48 352 52 HOH HOH A . G 5 HOH 49 353 53 HOH HOH A . G 5 HOH 50 354 54 HOH HOH A . G 5 HOH 51 355 55 HOH HOH A . G 5 HOH 52 356 56 HOH HOH A . G 5 HOH 53 357 57 HOH HOH A . G 5 HOH 54 358 58 HOH HOH A . G 5 HOH 55 359 59 HOH HOH A . G 5 HOH 56 360 60 HOH HOH A . G 5 HOH 57 361 61 HOH HOH A . G 5 HOH 58 362 62 HOH HOH A . G 5 HOH 59 363 63 HOH HOH A . G 5 HOH 60 364 64 HOH HOH A . G 5 HOH 61 365 65 HOH HOH A . G 5 HOH 62 366 66 HOH HOH A . G 5 HOH 63 367 67 HOH HOH A . G 5 HOH 64 368 68 HOH HOH A . G 5 HOH 65 369 69 HOH HOH A . G 5 HOH 66 370 70 HOH HOH A . G 5 HOH 67 371 71 HOH HOH A . G 5 HOH 68 372 72 HOH HOH A . G 5 HOH 69 373 73 HOH HOH A . G 5 HOH 70 374 74 HOH HOH A . G 5 HOH 71 375 75 HOH HOH A . G 5 HOH 72 376 76 HOH HOH A . G 5 HOH 73 377 77 HOH HOH A . G 5 HOH 74 378 78 HOH HOH A . G 5 HOH 75 379 79 HOH HOH A . G 5 HOH 76 380 80 HOH HOH A . G 5 HOH 77 381 81 HOH HOH A . G 5 HOH 78 382 82 HOH HOH A . G 5 HOH 79 383 83 HOH HOH A . G 5 HOH 80 384 84 HOH HOH A . G 5 HOH 81 385 85 HOH HOH A . G 5 HOH 82 386 86 HOH HOH A . G 5 HOH 83 387 87 HOH HOH A . G 5 HOH 84 388 88 HOH HOH A . G 5 HOH 85 389 89 HOH HOH A . G 5 HOH 86 390 90 HOH HOH A . G 5 HOH 87 391 91 HOH HOH A . G 5 HOH 88 392 92 HOH HOH A . G 5 HOH 89 393 93 HOH HOH A . G 5 HOH 90 394 94 HOH HOH A . G 5 HOH 91 395 95 HOH HOH A . G 5 HOH 92 396 96 HOH HOH A . G 5 HOH 93 397 97 HOH HOH A . G 5 HOH 94 398 98 HOH HOH A . G 5 HOH 95 399 99 HOH HOH A . G 5 HOH 96 400 100 HOH HOH A . G 5 HOH 97 401 101 HOH HOH A . G 5 HOH 98 402 102 HOH HOH A . G 5 HOH 99 403 103 HOH HOH A . G 5 HOH 100 404 104 HOH HOH A . G 5 HOH 101 405 105 HOH HOH A . G 5 HOH 102 406 106 HOH HOH A . G 5 HOH 103 407 107 HOH HOH A . G 5 HOH 104 408 108 HOH HOH A . G 5 HOH 105 409 109 HOH HOH A . G 5 HOH 106 410 110 HOH HOH A . G 5 HOH 107 411 111 HOH HOH A . G 5 HOH 108 412 112 HOH HOH A . G 5 HOH 109 413 113 HOH HOH A . G 5 HOH 110 414 114 HOH HOH A . G 5 HOH 111 415 115 HOH HOH A . G 5 HOH 112 416 116 HOH HOH A . G 5 HOH 113 417 117 HOH HOH A . G 5 HOH 114 418 118 HOH HOH A . G 5 HOH 115 419 119 HOH HOH A . G 5 HOH 116 420 120 HOH HOH A . G 5 HOH 117 421 121 HOH HOH A . G 5 HOH 118 422 122 HOH HOH A . G 5 HOH 119 423 123 HOH HOH A . G 5 HOH 120 424 124 HOH HOH A . G 5 HOH 121 425 125 HOH HOH A . G 5 HOH 122 426 126 HOH HOH A . G 5 HOH 123 427 127 HOH HOH A . G 5 HOH 124 428 128 HOH HOH A . G 5 HOH 125 429 129 HOH HOH A . G 5 HOH 126 430 130 HOH HOH A . G 5 HOH 127 431 131 HOH HOH A . G 5 HOH 128 432 132 HOH HOH A . G 5 HOH 129 433 133 HOH HOH A . G 5 HOH 130 434 134 HOH HOH A . G 5 HOH 131 435 135 HOH HOH A . G 5 HOH 132 436 136 HOH HOH A . G 5 HOH 133 437 137 HOH HOH A . G 5 HOH 134 438 138 HOH HOH A . G 5 HOH 135 439 139 HOH HOH A . G 5 HOH 136 440 140 HOH HOH A . G 5 HOH 137 441 141 HOH HOH A . G 5 HOH 138 442 142 HOH HOH A . G 5 HOH 139 443 143 HOH HOH A . G 5 HOH 140 444 144 HOH HOH A . G 5 HOH 141 445 145 HOH HOH A . G 5 HOH 142 446 146 HOH HOH A . G 5 HOH 143 447 147 HOH HOH A . G 5 HOH 144 448 148 HOH HOH A . G 5 HOH 145 449 149 HOH HOH A . G 5 HOH 146 450 150 HOH HOH A . G 5 HOH 147 451 151 HOH HOH A . G 5 HOH 148 452 152 HOH HOH A . G 5 HOH 149 453 153 HOH HOH A . G 5 HOH 150 454 154 HOH HOH A . G 5 HOH 151 455 155 HOH HOH A . G 5 HOH 152 456 156 HOH HOH A . G 5 HOH 153 457 157 HOH HOH A . G 5 HOH 154 458 158 HOH HOH A . G 5 HOH 155 459 159 HOH HOH A . G 5 HOH 156 460 160 HOH HOH A . G 5 HOH 157 461 161 HOH HOH A . G 5 HOH 158 462 162 HOH HOH A . G 5 HOH 159 463 163 HOH HOH A . G 5 HOH 160 464 164 HOH HOH A . G 5 HOH 161 465 165 HOH HOH A . G 5 HOH 162 466 166 HOH HOH A . G 5 HOH 163 467 167 HOH HOH A . G 5 HOH 164 468 168 HOH HOH A . G 5 HOH 165 469 169 HOH HOH A . G 5 HOH 166 470 170 HOH HOH A . G 5 HOH 167 471 171 HOH HOH A . G 5 HOH 168 472 172 HOH HOH A . G 5 HOH 169 473 173 HOH HOH A . G 5 HOH 170 474 174 HOH HOH A . G 5 HOH 171 475 175 HOH HOH A . G 5 HOH 172 476 176 HOH HOH A . G 5 HOH 173 477 177 HOH HOH A . G 5 HOH 174 478 178 HOH HOH A . G 5 HOH 175 479 179 HOH HOH A . G 5 HOH 176 480 180 HOH HOH A . G 5 HOH 177 481 181 HOH HOH A . G 5 HOH 178 482 182 HOH HOH A . G 5 HOH 179 483 183 HOH HOH A . G 5 HOH 180 484 184 HOH HOH A . G 5 HOH 181 485 185 HOH HOH A . G 5 HOH 182 486 186 HOH HOH A . G 5 HOH 183 487 187 HOH HOH A . G 5 HOH 184 488 188 HOH HOH A . G 5 HOH 185 489 189 HOH HOH A . G 5 HOH 186 490 190 HOH HOH A . G 5 HOH 187 491 191 HOH HOH A . G 5 HOH 188 492 192 HOH HOH A . G 5 HOH 189 493 193 HOH HOH A . G 5 HOH 190 494 194 HOH HOH A . G 5 HOH 191 495 195 HOH HOH A . G 5 HOH 192 496 196 HOH HOH A . G 5 HOH 193 497 197 HOH HOH A . G 5 HOH 194 498 198 HOH HOH A . G 5 HOH 195 499 199 HOH HOH A . G 5 HOH 196 500 200 HOH HOH A . G 5 HOH 197 501 201 HOH HOH A . G 5 HOH 198 502 202 HOH HOH A . G 5 HOH 199 503 203 HOH HOH A . G 5 HOH 200 504 204 HOH HOH A . G 5 HOH 201 505 205 HOH HOH A . G 5 HOH 202 506 206 HOH HOH A . G 5 HOH 203 507 207 HOH HOH A . G 5 HOH 204 508 208 HOH HOH A . G 5 HOH 205 509 209 HOH HOH A . G 5 HOH 206 510 210 HOH HOH A . G 5 HOH 207 511 211 HOH HOH A . G 5 HOH 208 512 212 HOH HOH A . G 5 HOH 209 513 213 HOH HOH A . G 5 HOH 210 514 214 HOH HOH A . G 5 HOH 211 515 215 HOH HOH A . G 5 HOH 212 516 216 HOH HOH A . G 5 HOH 213 517 217 HOH HOH A . G 5 HOH 214 518 218 HOH HOH A . G 5 HOH 215 519 219 HOH HOH A . G 5 HOH 216 520 220 HOH HOH A . G 5 HOH 217 521 221 HOH HOH A . G 5 HOH 218 522 222 HOH HOH A . G 5 HOH 219 523 223 HOH HOH A . G 5 HOH 220 524 224 HOH HOH A . G 5 HOH 221 525 225 HOH HOH A . G 5 HOH 222 526 226 HOH HOH A . G 5 HOH 223 527 227 HOH HOH A . G 5 HOH 224 528 228 HOH HOH A . G 5 HOH 225 529 229 HOH HOH A . G 5 HOH 226 530 230 HOH HOH A . G 5 HOH 227 531 231 HOH HOH A . G 5 HOH 228 532 232 HOH HOH A . G 5 HOH 229 533 233 HOH HOH A . G 5 HOH 230 534 234 HOH HOH A . G 5 HOH 231 535 235 HOH HOH A . G 5 HOH 232 536 236 HOH HOH A . G 5 HOH 233 537 237 HOH HOH A . G 5 HOH 234 538 238 HOH HOH A . G 5 HOH 235 539 239 HOH HOH A . G 5 HOH 236 540 240 HOH HOH A . G 5 HOH 237 541 241 HOH HOH A . G 5 HOH 238 542 242 HOH HOH A . G 5 HOH 239 543 243 HOH HOH A . G 5 HOH 240 544 244 HOH HOH A . G 5 HOH 241 545 245 HOH HOH A . G 5 HOH 242 546 246 HOH HOH A . G 5 HOH 243 547 247 HOH HOH A . G 5 HOH 244 548 248 HOH HOH A . G 5 HOH 245 549 249 HOH HOH A . G 5 HOH 246 550 250 HOH HOH A . G 5 HOH 247 551 251 HOH HOH A . G 5 HOH 248 552 252 HOH HOH A . G 5 HOH 249 553 253 HOH HOH A . G 5 HOH 250 554 254 HOH HOH A . G 5 HOH 251 555 255 HOH HOH A . G 5 HOH 252 556 256 HOH HOH A . G 5 HOH 253 557 257 HOH HOH A . G 5 HOH 254 558 258 HOH HOH A . G 5 HOH 255 559 259 HOH HOH A . G 5 HOH 256 560 260 HOH HOH A . G 5 HOH 257 561 261 HOH HOH A . G 5 HOH 258 562 262 HOH HOH A . G 5 HOH 259 563 263 HOH HOH A . G 5 HOH 260 564 264 HOH HOH A . G 5 HOH 261 565 265 HOH HOH A . G 5 HOH 262 566 266 HOH HOH A . G 5 HOH 263 567 267 HOH HOH A . G 5 HOH 264 568 268 HOH HOH A . G 5 HOH 265 569 269 HOH HOH A . G 5 HOH 266 570 270 HOH HOH A . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 40 A MSE 39 ? MET SELENOMETHIONINE 2 A MSE 109 A MSE 108 ? MET SELENOMETHIONINE 3 A MSE 167 A MSE 166 ? MET SELENOMETHIONINE # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA,PQS _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 4960 ? 1 MORE -100 ? 1 'SSA (A^2)' 15040 ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 8_675 x-y+1,-y+2,-z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 100.3428994349 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 # _pdbx_struct_special_symmetry.id 1 _pdbx_struct_special_symmetry.PDB_model_num 1 _pdbx_struct_special_symmetry.auth_asym_id A _pdbx_struct_special_symmetry.auth_comp_id HOH _pdbx_struct_special_symmetry.auth_seq_id 315 _pdbx_struct_special_symmetry.PDB_ins_code ? _pdbx_struct_special_symmetry.label_asym_id G _pdbx_struct_special_symmetry.label_comp_id HOH _pdbx_struct_special_symmetry.label_seq_id . # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 NE2 ? A HIS 77 ? A HIS 76 ? 1_555 NI ? B NI . ? A NI 300 ? 1_555 OD2 ? A ASP 169 ? A ASP 168 ? 1_555 98.4 ? 2 NE2 ? A HIS 77 ? A HIS 76 ? 1_555 NI ? B NI . ? A NI 300 ? 1_555 NE2 ? A HIS 173 ? A HIS 172 ? 1_555 96.1 ? 3 OD2 ? A ASP 169 ? A ASP 168 ? 1_555 NI ? B NI . ? A NI 300 ? 1_555 NE2 ? A HIS 173 ? A HIS 172 ? 1_555 96.9 ? 4 NE2 ? A HIS 77 ? A HIS 76 ? 1_555 NI ? B NI . ? A NI 300 ? 1_555 O ? G HOH . ? A HOH 403 ? 1_555 88.1 ? 5 OD2 ? A ASP 169 ? A ASP 168 ? 1_555 NI ? B NI . ? A NI 300 ? 1_555 O ? G HOH . ? A HOH 403 ? 1_555 170.1 ? 6 NE2 ? A HIS 173 ? A HIS 172 ? 1_555 NI ? B NI . ? A NI 300 ? 1_555 O ? G HOH . ? A HOH 403 ? 1_555 89.7 ? 7 NE2 ? A HIS 77 ? A HIS 76 ? 1_555 NI ? B NI . ? A NI 300 ? 1_555 O ? G HOH . ? A HOH 436 ? 1_555 93.0 ? 8 OD2 ? A ASP 169 ? A ASP 168 ? 1_555 NI ? B NI . ? A NI 300 ? 1_555 O ? G HOH . ? A HOH 436 ? 1_555 90.0 ? 9 NE2 ? A HIS 173 ? A HIS 172 ? 1_555 NI ? B NI . ? A NI 300 ? 1_555 O ? G HOH . ? A HOH 436 ? 1_555 167.6 ? 10 O ? G HOH . ? A HOH 403 ? 1_555 NI ? B NI . ? A NI 300 ? 1_555 O ? G HOH . ? A HOH 436 ? 1_555 82.2 ? 11 NE2 ? A HIS 77 ? A HIS 76 ? 1_555 NI ? B NI . ? A NI 300 ? 1_555 O ? G HOH . ? A HOH 449 ? 1_555 165.7 ? 12 OD2 ? A ASP 169 ? A ASP 168 ? 1_555 NI ? B NI . ? A NI 300 ? 1_555 O ? G HOH . ? A HOH 449 ? 1_555 95.7 ? 13 NE2 ? A HIS 173 ? A HIS 172 ? 1_555 NI ? B NI . ? A NI 300 ? 1_555 O ? G HOH . ? A HOH 449 ? 1_555 84.5 ? 14 O ? G HOH . ? A HOH 403 ? 1_555 NI ? B NI . ? A NI 300 ? 1_555 O ? G HOH . ? A HOH 449 ? 1_555 77.6 ? 15 O ? G HOH . ? A HOH 436 ? 1_555 NI ? B NI . ? A NI 300 ? 1_555 O ? G HOH . ? A HOH 449 ? 1_555 84.6 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2007-02-20 2 'Structure model' 1 1 2008-05-01 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2017-10-18 5 'Structure model' 1 4 2023-01-25 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' Advisory 3 3 'Structure model' 'Derived calculations' 4 3 'Structure model' 'Version format compliance' 5 4 'Structure model' 'Refinement description' 6 5 'Structure model' 'Database references' 7 5 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' software 2 5 'Structure model' database_2 3 5 'Structure model' pdbx_struct_conn_angle 4 5 'Structure model' struct_conn 5 5 'Structure model' struct_ref_seq_dif 6 5 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_software.classification' 2 4 'Structure model' '_software.name' 3 5 'Structure model' '_database_2.pdbx_DOI' 4 5 'Structure model' '_database_2.pdbx_database_accession' 5 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 6 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 7 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 8 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 9 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 10 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 11 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 12 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 13 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 14 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 15 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 16 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 17 5 'Structure model' '_pdbx_struct_conn_angle.value' 18 5 'Structure model' '_struct_conn.pdbx_dist_value' 19 5 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 20 5 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 21 5 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 22 5 'Structure model' '_struct_conn.ptnr1_label_asym_id' 23 5 'Structure model' '_struct_conn.ptnr1_label_atom_id' 24 5 'Structure model' '_struct_conn.ptnr1_label_comp_id' 25 5 'Structure model' '_struct_conn.ptnr1_label_seq_id' 26 5 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 27 5 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 28 5 'Structure model' '_struct_conn.ptnr2_label_asym_id' 29 5 'Structure model' '_struct_conn.ptnr2_label_atom_id' 30 5 'Structure model' '_struct_conn.ptnr2_label_comp_id' 31 5 'Structure model' '_struct_conn.ptnr2_label_seq_id' 32 5 'Structure model' '_struct_ref_seq_dif.details' 33 5 'Structure model' '_struct_site.pdbx_auth_asym_id' 34 5 'Structure model' '_struct_site.pdbx_auth_comp_id' 35 5 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_refine_tls.id 1 _pdbx_refine_tls.details ? _pdbx_refine_tls.method refined _pdbx_refine_tls.origin_x 13.6470 _pdbx_refine_tls.origin_y 39.1930 _pdbx_refine_tls.origin_z 2.4930 _pdbx_refine_tls.T[1][1] 0.0107 _pdbx_refine_tls.T[2][2] -0.0383 _pdbx_refine_tls.T[3][3] -0.0890 _pdbx_refine_tls.T[1][2] -0.0021 _pdbx_refine_tls.T[1][3] 0.0017 _pdbx_refine_tls.T[2][3] -0.0119 _pdbx_refine_tls.L[1][1] 0.4919 _pdbx_refine_tls.L[2][2] 0.7817 _pdbx_refine_tls.L[3][3] 0.5193 _pdbx_refine_tls.L[1][2] 0.1147 _pdbx_refine_tls.L[1][3] -0.0674 _pdbx_refine_tls.L[2][3] -0.0598 _pdbx_refine_tls.S[1][1] 0.0203 _pdbx_refine_tls.S[2][2] -0.0112 _pdbx_refine_tls.S[3][3] -0.0091 _pdbx_refine_tls.S[1][2] -0.0194 _pdbx_refine_tls.S[1][3] -0.0413 _pdbx_refine_tls.S[2][3] 0.0191 _pdbx_refine_tls.S[2][1] 0.0356 _pdbx_refine_tls.S[3][1] 0.0985 _pdbx_refine_tls.S[3][2] -0.0105 _pdbx_refine_tls.pdbx_refine_id 'X-RAY DIFFRACTION' # _pdbx_refine_tls_group.id 1 _pdbx_refine_tls_group.refine_tls_id 1 _pdbx_refine_tls_group.beg_label_asym_id A _pdbx_refine_tls_group.beg_label_seq_id 3 _pdbx_refine_tls_group.end_label_asym_id A _pdbx_refine_tls_group.end_label_seq_id 185 _pdbx_refine_tls_group.selection ALL _pdbx_refine_tls_group.beg_auth_asym_id A _pdbx_refine_tls_group.beg_auth_seq_id 2 _pdbx_refine_tls_group.end_auth_asym_id A _pdbx_refine_tls_group.end_auth_seq_id 184 _pdbx_refine_tls_group.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls_group.selection_details ? # _phasing.method MAD # loop_ _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id _software.pdbx_ordinal MolProbity 3beta29 ? package 'D.C. & J.S. Richardson lab' molprobity@kinemage.biochem.duke.edu 'model building' http://kinemage.biochem.duke.edu/molprobity/ ? ? 1 SHELX . ? package 'George Sheldrick' gsheldr@shelx.uni-ac.gwdg.de phasing http://shelx.uni-ac.gwdg.de/SHELX/ Fortran_77 ? 2 REFMAC 5.2.0005 ? program 'Murshudov, G.N.' ccp4@dl.ac.uk refinement http://www.ccp4.ac.uk/main.html Fortran_77 ? 3 SCALA . ? other 'Phil Evans' pre@mrc-lmb.cam.ac.uk 'data scaling' http://www.ccp4.ac.uk/dist/html/INDEX.html Fortran_77 ? 4 PDB_EXTRACT 2.000 'April. 3, 2006' package PDB sw-help@rcsb.rutgers.edu 'data extraction' http://pdb.rutgers.edu/software/ C++ ? 5 MAR345 CCD ? ? ? ? 'data collection' ? ? ? 6 MOSFLM . ? ? ? ? 'data reduction' ? ? ? 7 CCP4 '(SCALA)' ? ? ? ? 'data scaling' ? ? ? 8 SHELXD . ? ? ? ? phasing ? ? ? 9 autoSHARP . ? ? ? ? phasing ? ? ? 10 # _pdbx_database_remark.id 999 _pdbx_database_remark.text ; SEQUENCE THE CONSTRUCT WAS EXPRESSED WITH A PURIFICATION TAG MGSDKIHHHHHHENLYFQG. THE TAG WAS REMOVED WITH TEV PROTEASE LEAVING ONLY A GLYCINE, FOLLOWED BY THE TARGET SEQUENCE. ; # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 OE2 A GLU 56 ? ? O A HOH 567 ? ? 2.11 2 1 ND2 A ASN 14 ? ? O A HOH 568 ? ? 2.14 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASN A 14 ? ? -89.69 45.17 2 1 TRP A 155 ? ? 82.76 -1.50 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A GLU 7 ? CD ? A GLU 8 CD 2 1 Y 1 A GLU 7 ? OE1 ? A GLU 8 OE1 3 1 Y 1 A GLU 7 ? OE2 ? A GLU 8 OE2 4 1 Y 1 A LYS 110 ? CD ? A LYS 111 CD 5 1 Y 1 A LYS 110 ? CE ? A LYS 111 CE 6 1 Y 1 A LYS 110 ? NZ ? A LYS 111 NZ # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 0 ? A GLY 1 2 1 Y 1 A MSE 1 ? A MSE 2 3 1 Y 1 A PRO 185 ? A PRO 186 4 1 Y 1 A GLU 186 ? A GLU 187 5 1 Y 1 A GLU 187 ? A GLU 188 6 1 Y 1 A GLY 188 ? A GLY 189 7 1 Y 1 A GLY 189 ? A GLY 190 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'NICKEL (II) ION' NI 3 'SULFATE ION' SO4 4 GLYCEROL GOL 5 water HOH #