data_2P4D # _entry.id 2P4D # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.286 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 2P4D RCSB RCSB041950 WWPDB D_1000041950 # _pdbx_database_status.entry_id 2P4D _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2007-03-12 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Phan, J.' 1 'Tropea, J.E.' 2 'Waugh, D.S.' 3 # _citation.id primary _citation.title 'Structure-assisted discovery of variola major H1 phosphatase inhibitors' _citation.journal_abbrev 'Acta Crystallogr.,Sect.D' _citation.journal_volume D63 _citation.page_first 698 _citation.page_last 704 _citation.year 2007 _citation.journal_id_ASTM ABCRE6 _citation.country DK _citation.journal_id_ISSN 0907-4449 _citation.journal_id_CSD 0766 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 17505108 _citation.pdbx_database_id_DOI 10.1107/S0907444907014904 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Phan, J.' 1 primary 'Tropea, J.E.' 2 primary 'Waugh, D.S.' 3 # _cell.length_a 101.441 _cell.length_b 101.441 _cell.length_c 95.101 _cell.angle_alpha 90.000 _cell.angle_beta 90.000 _cell.angle_gamma 90.000 _cell.entry_id 2P4D _cell.pdbx_unique_axis ? _cell.Z_PDB 16 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.space_group_name_H-M 'I 41 2 2' _symmetry.entry_id 2P4D _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.Int_Tables_number 98 _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Dual specificity protein phosphatase' 20235.174 1 '3.1.3.48, 3.1.3.16' ? Enzyme ? 2 water nat water 18.015 190 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Late protein H1' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;SMDKKSLYKYLLLRSTGD(MSE)RRAKSPTI(MSE)TRVTNNVYLGNYKNA(MSE)NAPSSEVKFKYVLNLT(MSE)DKY TLPNSNINIIHIPLVDDTTTDISKYFDDVTAFLSKCDQRNEPVLVHCVAGVNRSGA(MSE)ILAYL(MSE)SKNKESSP (MSE)LYFLYVYHS(MSE)RDLRGAFVENPSFKRQIIEKYVIDKN ; _entity_poly.pdbx_seq_one_letter_code_can ;SMDKKSLYKYLLLRSTGDMRRAKSPTIMTRVTNNVYLGNYKNAMNAPSSEVKFKYVLNLTMDKYTLPNSNINIIHIPLVD DTTTDISKYFDDVTAFLSKCDQRNEPVLVHCVAGVNRSGAMILAYLMSKNKESSPMLYFLYVYHSMRDLRGAFVENPSFK RQIIEKYVIDKN ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 SER n 1 2 MET n 1 3 ASP n 1 4 LYS n 1 5 LYS n 1 6 SER n 1 7 LEU n 1 8 TYR n 1 9 LYS n 1 10 TYR n 1 11 LEU n 1 12 LEU n 1 13 LEU n 1 14 ARG n 1 15 SER n 1 16 THR n 1 17 GLY n 1 18 ASP n 1 19 MSE n 1 20 ARG n 1 21 ARG n 1 22 ALA n 1 23 LYS n 1 24 SER n 1 25 PRO n 1 26 THR n 1 27 ILE n 1 28 MSE n 1 29 THR n 1 30 ARG n 1 31 VAL n 1 32 THR n 1 33 ASN n 1 34 ASN n 1 35 VAL n 1 36 TYR n 1 37 LEU n 1 38 GLY n 1 39 ASN n 1 40 TYR n 1 41 LYS n 1 42 ASN n 1 43 ALA n 1 44 MSE n 1 45 ASN n 1 46 ALA n 1 47 PRO n 1 48 SER n 1 49 SER n 1 50 GLU n 1 51 VAL n 1 52 LYS n 1 53 PHE n 1 54 LYS n 1 55 TYR n 1 56 VAL n 1 57 LEU n 1 58 ASN n 1 59 LEU n 1 60 THR n 1 61 MSE n 1 62 ASP n 1 63 LYS n 1 64 TYR n 1 65 THR n 1 66 LEU n 1 67 PRO n 1 68 ASN n 1 69 SER n 1 70 ASN n 1 71 ILE n 1 72 ASN n 1 73 ILE n 1 74 ILE n 1 75 HIS n 1 76 ILE n 1 77 PRO n 1 78 LEU n 1 79 VAL n 1 80 ASP n 1 81 ASP n 1 82 THR n 1 83 THR n 1 84 THR n 1 85 ASP n 1 86 ILE n 1 87 SER n 1 88 LYS n 1 89 TYR n 1 90 PHE n 1 91 ASP n 1 92 ASP n 1 93 VAL n 1 94 THR n 1 95 ALA n 1 96 PHE n 1 97 LEU n 1 98 SER n 1 99 LYS n 1 100 CYS n 1 101 ASP n 1 102 GLN n 1 103 ARG n 1 104 ASN n 1 105 GLU n 1 106 PRO n 1 107 VAL n 1 108 LEU n 1 109 VAL n 1 110 HIS n 1 111 CYS n 1 112 VAL n 1 113 ALA n 1 114 GLY n 1 115 VAL n 1 116 ASN n 1 117 ARG n 1 118 SER n 1 119 GLY n 1 120 ALA n 1 121 MSE n 1 122 ILE n 1 123 LEU n 1 124 ALA n 1 125 TYR n 1 126 LEU n 1 127 MSE n 1 128 SER n 1 129 LYS n 1 130 ASN n 1 131 LYS n 1 132 GLU n 1 133 SER n 1 134 SER n 1 135 PRO n 1 136 MSE n 1 137 LEU n 1 138 TYR n 1 139 PHE n 1 140 LEU n 1 141 TYR n 1 142 VAL n 1 143 TYR n 1 144 HIS n 1 145 SER n 1 146 MSE n 1 147 ARG n 1 148 ASP n 1 149 LEU n 1 150 ARG n 1 151 GLY n 1 152 ALA n 1 153 PHE n 1 154 VAL n 1 155 GLU n 1 156 ASN n 1 157 PRO n 1 158 SER n 1 159 PHE n 1 160 LYS n 1 161 ARG n 1 162 GLN n 1 163 ILE n 1 164 ILE n 1 165 GLU n 1 166 LYS n 1 167 TYR n 1 168 VAL n 1 169 ILE n 1 170 ASP n 1 171 LYS n 1 172 ASN n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus Orthopoxvirus _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Variola virus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 10255 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21(DE3)' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species 'Escherichia coli' _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type Plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pVPPase2 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code DUSP_VARV _struct_ref.pdbx_db_accession P33064 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MDKKSLYKYLLLRSTGDMRRAKSPTIMTRVTNNVYLGNYKNAMNAPSSEVKFKYVLNLTMDKYTLPNSNINIIHIPLVDD TTTDISKYFDDVTAFLSKCDQRNEPVLVHCVAGVNRSGAMILAYLMSKNKESSPMLYFLYVYHSMRDLRGAFVENPSFKR QIIEKYVIDKN ; _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 2P4D _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 2 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 172 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P33064 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 171 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 171 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 2P4D SER A 1 ? UNP P33064 ? ? 'cloning artifact' 0 1 1 2P4D MSE A 19 ? UNP P33064 MET 18 'MODIFIED RESIDUE' 18 2 1 2P4D MSE A 28 ? UNP P33064 MET 27 'MODIFIED RESIDUE' 27 3 1 2P4D MSE A 44 ? UNP P33064 MET 43 'MODIFIED RESIDUE' 43 4 1 2P4D MSE A 61 ? UNP P33064 MET 60 'MODIFIED RESIDUE' 60 5 1 2P4D MSE A 121 ? UNP P33064 MET 120 'MODIFIED RESIDUE' 120 6 1 2P4D MSE A 127 ? UNP P33064 MET 126 'MODIFIED RESIDUE' 126 7 1 2P4D MSE A 136 ? UNP P33064 MET 135 'MODIFIED RESIDUE' 135 8 1 2P4D MSE A 146 ? UNP P33064 MET 145 'MODIFIED RESIDUE' 145 9 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.crystals_number 1 _exptl.entry_id 2P4D _exptl.method 'X-RAY DIFFRACTION' # _exptl_crystal.id 1 _exptl_crystal.density_Matthews 3.1 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 60.0 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.pH 6.5 _exptl_crystal_grow.temp 290 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_details '26% PEG MME 2000, 1.5 M KF, 3 mM Na3VO4, 0.1 M Bis-Tris, pH 6.5, VAPOR DIFFUSION, SITTING DROP, temperature 290K' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'MAR CCD 165 mm' _diffrn_detector.pdbx_collection_date 2005-02-05 _diffrn_detector.details 'Crystals and mirrors' # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_diffrn_protocol MAD _diffrn_radiation.monochromator Si-220 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_scattering_type x-ray # loop_ _diffrn_radiation_wavelength.id _diffrn_radiation_wavelength.wavelength _diffrn_radiation_wavelength.wt 1 0.9792 1.0 2 0.97925 1.0 3 0.97939 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'APS BEAMLINE 22-ID' _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list '0.9792, 0.97925, 0.97939' _diffrn_source.pdbx_synchrotron_site APS _diffrn_source.pdbx_synchrotron_beamline 22-ID # _reflns.entry_id 2P4D _reflns.B_iso_Wilson_estimate 28.915 _reflns.observed_criterion_sigma_F 2 _reflns.observed_criterion_sigma_I 2 _reflns.d_resolution_high 1.8 _reflns.d_resolution_low 25 _reflns.number_all 22420 _reflns.number_obs 22420 _reflns.percent_possible_obs 88.1 _reflns.pdbx_Rmerge_I_obs 0.1 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 12.9 _reflns.pdbx_redundancy 7.5 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 1.80 _reflns_shell.d_res_low 1.86 _reflns_shell.percent_possible_obs ? _reflns_shell.percent_possible_all ? _reflns_shell.Rmerge_I_obs 0.39 _reflns_shell.meanI_over_sigI_obs 5.0 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_redundancy 7.2 _reflns_shell.number_unique_all 2239 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 2P4D _refine.ls_d_res_high 1.800 _refine.ls_d_res_low 25.000 _refine.pdbx_ls_sigma_F 0.00 _refine.ls_percent_reflns_obs 95.970 _refine.ls_number_reflns_obs 22330 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details RANDOM _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.ls_R_factor_obs 0.179 _refine.ls_R_factor_R_work 0.178 _refine.ls_R_factor_R_free 0.195 _refine.ls_percent_reflns_R_free 5.200 _refine.ls_number_reflns_R_free 1155 _refine.B_iso_mean 31.769 _refine.aniso_B[1][1] 0.080 _refine.aniso_B[2][2] 0.080 _refine.aniso_B[3][3] -0.170 _refine.aniso_B[1][2] 0.000 _refine.aniso_B[1][3] 0.000 _refine.aniso_B[2][3] 0.000 _refine.correlation_coeff_Fo_to_Fc 0.960 _refine.correlation_coeff_Fo_to_Fc_free 0.957 _refine.pdbx_overall_ESU_R 0.104 _refine.pdbx_overall_ESU_R_Free 0.097 _refine.overall_SU_ML 0.056 _refine.overall_SU_B 1.744 _refine.solvent_model_details MASK _refine.pdbx_solvent_vdw_probe_radii 1.200 _refine.pdbx_solvent_ion_probe_radii 0.800 _refine.pdbx_solvent_shrinkage_radii 0.800 _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_ls_sigma_I ? _refine.ls_number_reflns_all ? _refine.ls_R_factor_all ? _refine.ls_redundancy_reflns_obs ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_method_to_determine_struct MAD _refine.pdbx_starting_model ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.pdbx_isotropic_thermal_model ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1316 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 190 _refine_hist.number_atoms_total 1506 _refine_hist.d_res_high 1.800 _refine_hist.d_res_low 25.000 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 1343 0.021 0.022 ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1816 1.618 1.971 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 162 5.783 5.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 59 34.481 23.390 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 245 13.900 15.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 9 14.038 15.000 ? 'X-RAY DIFFRACTION' ? r_chiral_restr 206 0.125 0.200 ? 'X-RAY DIFFRACTION' ? r_gen_planes_refined 993 0.007 0.020 ? 'X-RAY DIFFRACTION' ? r_nbd_refined 582 0.208 0.200 ? 'X-RAY DIFFRACTION' ? r_nbtor_refined 925 0.311 0.200 ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 150 0.182 0.200 ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 38 0.151 0.200 ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 15 0.291 0.200 ? 'X-RAY DIFFRACTION' ? r_mcbond_it 843 1.373 1.500 ? 'X-RAY DIFFRACTION' ? r_mcangle_it 1331 2.027 2.000 ? 'X-RAY DIFFRACTION' ? r_scbond_it 573 3.467 3.000 ? 'X-RAY DIFFRACTION' ? r_scangle_it 485 4.802 4.500 ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.d_res_high 1.800 _refine_ls_shell.d_res_low 1.847 _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.percent_reflns_obs 97.550 _refine_ls_shell.number_reflns_R_work 1553 _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_R_work 0.2 _refine_ls_shell.R_factor_R_free 0.279 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 79 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.number_reflns_all ? _refine_ls_shell.number_reflns_obs 1632 _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 2P4D _struct.title 'Structure-assisted discovery of Variola major H1 phosphatase inhibitors' _struct.pdbx_descriptor 'Dual specificity protein phosphatase (E.C.3.1.3.48, 3.1.3.16)' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2P4D _struct_keywords.pdbx_keywords HYDROLASE _struct_keywords.text 'dual specificity phosphatase, enzyme, small pox, drug design, HYDROLASE' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 SER A 6 ? THR A 16 ? SER A 5 THR A 15 1 ? 11 HELX_P HELX_P2 2 ASN A 39 ? ALA A 46 ? ASN A 38 ALA A 45 1 ? 8 HELX_P HELX_P3 3 PRO A 47 ? SER A 49 ? PRO A 46 SER A 48 5 ? 3 HELX_P HELX_P4 4 ILE A 86 ? LYS A 88 ? ILE A 85 LYS A 87 5 ? 3 HELX_P HELX_P5 5 TYR A 89 ? ASN A 104 ? TYR A 88 ASN A 103 1 ? 16 HELX_P HELX_P6 6 ASN A 116 ? ASN A 130 ? ASN A 115 ASN A 129 1 ? 15 HELX_P HELX_P7 7 SER A 134 ? GLY A 151 ? SER A 133 GLY A 150 1 ? 18 HELX_P HELX_P8 8 ASN A 156 ? VAL A 168 ? ASN A 155 VAL A 167 1 ? 13 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale1 covale ? ? A ASP 18 C ? ? ? 1_555 A MSE 19 N ? ? A ASP 17 A MSE 18 1_555 ? ? ? ? ? ? ? 1.332 ? covale2 covale ? ? A MSE 19 C ? ? ? 1_555 A ARG 20 N ? ? A MSE 18 A ARG 19 1_555 ? ? ? ? ? ? ? 1.331 ? covale3 covale ? ? A ILE 27 C ? ? ? 1_555 A MSE 28 N ? ? A ILE 26 A MSE 27 1_555 ? ? ? ? ? ? ? 1.353 ? covale4 covale ? ? A MSE 28 C ? ? ? 1_555 A THR 29 N ? ? A MSE 27 A THR 28 1_555 ? ? ? ? ? ? ? 1.344 ? covale5 covale ? ? A ALA 43 C ? ? ? 1_555 A MSE 44 N ? ? A ALA 42 A MSE 43 1_555 ? ? ? ? ? ? ? 1.339 ? covale6 covale ? ? A MSE 44 C ? ? ? 1_555 A ASN 45 N ? ? A MSE 43 A ASN 44 1_555 ? ? ? ? ? ? ? 1.325 ? covale7 covale ? ? A THR 60 C ? ? ? 1_555 A MSE 61 N ? ? A THR 59 A MSE 60 1_555 ? ? ? ? ? ? ? 1.334 ? covale8 covale ? ? A MSE 61 C ? ? ? 1_555 A ASP 62 N ? ? A MSE 60 A ASP 61 1_555 ? ? ? ? ? ? ? 1.346 ? covale9 covale ? ? A ALA 120 C ? ? ? 1_555 A MSE 121 N ? ? A ALA 119 A MSE 120 1_555 ? ? ? ? ? ? ? 1.333 ? covale10 covale ? ? A MSE 121 C ? ? ? 1_555 A ILE 122 N ? ? A MSE 120 A ILE 121 1_555 ? ? ? ? ? ? ? 1.335 ? covale11 covale ? ? A LEU 126 C ? ? ? 1_555 A MSE 127 N ? ? A LEU 125 A MSE 126 1_555 ? ? ? ? ? ? ? 1.336 ? covale12 covale ? ? A MSE 127 C ? ? ? 1_555 A SER 128 N ? ? A MSE 126 A SER 127 1_555 ? ? ? ? ? ? ? 1.338 ? covale13 covale ? ? A PRO 135 C ? ? ? 1_555 A MSE 136 N ? ? A PRO 134 A MSE 135 1_555 ? ? ? ? ? ? ? 1.343 ? covale14 covale ? ? A MSE 136 C ? ? ? 1_555 A LEU 137 N ? ? A MSE 135 A LEU 136 1_555 ? ? ? ? ? ? ? 1.327 ? covale15 covale ? ? A SER 145 C ? ? ? 1_555 A MSE 146 N ? ? A SER 144 A MSE 145 1_555 ? ? ? ? ? ? ? 1.336 ? covale16 covale ? ? A MSE 146 C ? ? ? 1_555 A ARG 147 N ? ? A MSE 145 A ARG 146 1_555 ? ? ? ? ? ? ? 1.349 ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 5 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? parallel A 3 4 ? parallel A 4 5 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 THR A 29 ? ARG A 30 ? THR A 28 ARG A 29 A 2 VAL A 35 ? GLY A 38 ? VAL A 34 GLY A 37 A 3 VAL A 107 ? HIS A 110 ? VAL A 106 HIS A 109 A 4 TYR A 55 ? ASN A 58 ? TYR A 54 ASN A 57 A 5 ASN A 72 ? HIS A 75 ? ASN A 71 HIS A 74 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N THR A 29 ? N THR A 28 O LEU A 37 ? O LEU A 36 A 2 3 N TYR A 36 ? N TYR A 35 O VAL A 109 ? O VAL A 108 A 3 4 O LEU A 108 ? O LEU A 107 N LEU A 57 ? N LEU A 56 A 4 5 N VAL A 56 ? N VAL A 55 O ILE A 74 ? O ILE A 73 # _atom_sites.entry_id 2P4D _atom_sites.fract_transf_matrix[1][1] 0.009858 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.009858 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.010515 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C N O S SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 SER 1 0 ? ? ? A . n A 1 2 MET 2 1 ? ? ? A . n A 1 3 ASP 3 2 ? ? ? A . n A 1 4 LYS 4 3 ? ? ? A . n A 1 5 LYS 5 4 ? ? ? A . n A 1 6 SER 6 5 5 SER SER A . n A 1 7 LEU 7 6 6 LEU LEU A . n A 1 8 TYR 8 7 7 TYR TYR A . n A 1 9 LYS 9 8 8 LYS LYS A . n A 1 10 TYR 10 9 9 TYR TYR A . n A 1 11 LEU 11 10 10 LEU LEU A . n A 1 12 LEU 12 11 11 LEU LEU A . n A 1 13 LEU 13 12 12 LEU LEU A . n A 1 14 ARG 14 13 13 ARG ARG A . n A 1 15 SER 15 14 14 SER SER A . n A 1 16 THR 16 15 15 THR THR A . n A 1 17 GLY 17 16 16 GLY GLY A . n A 1 18 ASP 18 17 17 ASP ASP A . n A 1 19 MSE 19 18 18 MSE MSE A . n A 1 20 ARG 20 19 19 ARG ARG A . n A 1 21 ARG 21 20 20 ARG ARG A . n A 1 22 ALA 22 21 21 ALA ALA A . n A 1 23 LYS 23 22 22 LYS LYS A . n A 1 24 SER 24 23 23 SER SER A . n A 1 25 PRO 25 24 24 PRO PRO A . n A 1 26 THR 26 25 25 THR THR A . n A 1 27 ILE 27 26 26 ILE ILE A . n A 1 28 MSE 28 27 27 MSE MSE A . n A 1 29 THR 29 28 28 THR THR A . n A 1 30 ARG 30 29 29 ARG ARG A . n A 1 31 VAL 31 30 30 VAL VAL A . n A 1 32 THR 32 31 31 THR THR A . n A 1 33 ASN 33 32 32 ASN ASN A . n A 1 34 ASN 34 33 33 ASN ASN A . n A 1 35 VAL 35 34 34 VAL VAL A . n A 1 36 TYR 36 35 35 TYR TYR A . n A 1 37 LEU 37 36 36 LEU LEU A . n A 1 38 GLY 38 37 37 GLY GLY A . n A 1 39 ASN 39 38 38 ASN ASN A . n A 1 40 TYR 40 39 39 TYR TYR A . n A 1 41 LYS 41 40 40 LYS LYS A . n A 1 42 ASN 42 41 41 ASN ASN A . n A 1 43 ALA 43 42 42 ALA ALA A . n A 1 44 MSE 44 43 43 MSE MSE A . n A 1 45 ASN 45 44 44 ASN ASN A . n A 1 46 ALA 46 45 45 ALA ALA A . n A 1 47 PRO 47 46 46 PRO PRO A . n A 1 48 SER 48 47 47 SER SER A . n A 1 49 SER 49 48 48 SER SER A . n A 1 50 GLU 50 49 49 GLU GLU A . n A 1 51 VAL 51 50 50 VAL VAL A . n A 1 52 LYS 52 51 51 LYS LYS A . n A 1 53 PHE 53 52 52 PHE PHE A . n A 1 54 LYS 54 53 53 LYS LYS A . n A 1 55 TYR 55 54 54 TYR TYR A . n A 1 56 VAL 56 55 55 VAL VAL A . n A 1 57 LEU 57 56 56 LEU LEU A . n A 1 58 ASN 58 57 57 ASN ASN A . n A 1 59 LEU 59 58 58 LEU LEU A . n A 1 60 THR 60 59 59 THR THR A . n A 1 61 MSE 61 60 60 MSE MSE A . n A 1 62 ASP 62 61 61 ASP ASP A . n A 1 63 LYS 63 62 62 LYS LYS A . n A 1 64 TYR 64 63 63 TYR TYR A . n A 1 65 THR 65 64 64 THR THR A . n A 1 66 LEU 66 65 65 LEU LEU A . n A 1 67 PRO 67 66 66 PRO PRO A . n A 1 68 ASN 68 67 67 ASN ASN A . n A 1 69 SER 69 68 68 SER SER A . n A 1 70 ASN 70 69 69 ASN ASN A . n A 1 71 ILE 71 70 70 ILE ILE A . n A 1 72 ASN 72 71 71 ASN ASN A . n A 1 73 ILE 73 72 72 ILE ILE A . n A 1 74 ILE 74 73 73 ILE ILE A . n A 1 75 HIS 75 74 74 HIS HIS A . n A 1 76 ILE 76 75 75 ILE ILE A . n A 1 77 PRO 77 76 76 PRO PRO A . n A 1 78 LEU 78 77 77 LEU LEU A . n A 1 79 VAL 79 78 78 VAL VAL A . n A 1 80 ASP 80 79 79 ASP ASP A . n A 1 81 ASP 81 80 80 ASP ASP A . n A 1 82 THR 82 81 81 THR THR A . n A 1 83 THR 83 82 82 THR THR A . n A 1 84 THR 84 83 83 THR THR A . n A 1 85 ASP 85 84 84 ASP ASP A . n A 1 86 ILE 86 85 85 ILE ILE A . n A 1 87 SER 87 86 86 SER SER A . n A 1 88 LYS 88 87 87 LYS LYS A . n A 1 89 TYR 89 88 88 TYR TYR A . n A 1 90 PHE 90 89 89 PHE PHE A . n A 1 91 ASP 91 90 90 ASP ASP A . n A 1 92 ASP 92 91 91 ASP ASP A . n A 1 93 VAL 93 92 92 VAL VAL A . n A 1 94 THR 94 93 93 THR THR A . n A 1 95 ALA 95 94 94 ALA ALA A . n A 1 96 PHE 96 95 95 PHE PHE A . n A 1 97 LEU 97 96 96 LEU LEU A . n A 1 98 SER 98 97 97 SER SER A . n A 1 99 LYS 99 98 98 LYS LYS A . n A 1 100 CYS 100 99 99 CYS CYS A . n A 1 101 ASP 101 100 100 ASP ASP A . n A 1 102 GLN 102 101 101 GLN GLN A . n A 1 103 ARG 103 102 102 ARG ARG A . n A 1 104 ASN 104 103 103 ASN ASN A . n A 1 105 GLU 105 104 104 GLU GLU A . n A 1 106 PRO 106 105 105 PRO PRO A . n A 1 107 VAL 107 106 106 VAL VAL A . n A 1 108 LEU 108 107 107 LEU LEU A . n A 1 109 VAL 109 108 108 VAL VAL A . n A 1 110 HIS 110 109 109 HIS HIS A . n A 1 111 CYS 111 110 110 CYS CYS A . n A 1 112 VAL 112 111 111 VAL VAL A . n A 1 113 ALA 113 112 112 ALA ALA A . n A 1 114 GLY 114 113 113 GLY GLY A . n A 1 115 VAL 115 114 114 VAL VAL A . n A 1 116 ASN 116 115 115 ASN ASN A . n A 1 117 ARG 117 116 116 ARG ARG A . n A 1 118 SER 118 117 117 SER SER A . n A 1 119 GLY 119 118 118 GLY GLY A . n A 1 120 ALA 120 119 119 ALA ALA A . n A 1 121 MSE 121 120 120 MSE MSE A . n A 1 122 ILE 122 121 121 ILE ILE A . n A 1 123 LEU 123 122 122 LEU LEU A . n A 1 124 ALA 124 123 123 ALA ALA A . n A 1 125 TYR 125 124 124 TYR TYR A . n A 1 126 LEU 126 125 125 LEU LEU A . n A 1 127 MSE 127 126 126 MSE MSE A . n A 1 128 SER 128 127 127 SER SER A . n A 1 129 LYS 129 128 128 LYS LYS A . n A 1 130 ASN 130 129 129 ASN ASN A . n A 1 131 LYS 131 130 130 LYS LYS A . n A 1 132 GLU 132 131 131 GLU GLU A . n A 1 133 SER 133 132 132 SER SER A . n A 1 134 SER 134 133 133 SER SER A . n A 1 135 PRO 135 134 134 PRO PRO A . n A 1 136 MSE 136 135 135 MSE MSE A . n A 1 137 LEU 137 136 136 LEU LEU A . n A 1 138 TYR 138 137 137 TYR TYR A . n A 1 139 PHE 139 138 138 PHE PHE A . n A 1 140 LEU 140 139 139 LEU LEU A . n A 1 141 TYR 141 140 140 TYR TYR A . n A 1 142 VAL 142 141 141 VAL VAL A . n A 1 143 TYR 143 142 142 TYR TYR A . n A 1 144 HIS 144 143 143 HIS HIS A . n A 1 145 SER 145 144 144 SER SER A . n A 1 146 MSE 146 145 145 MSE MSE A . n A 1 147 ARG 147 146 146 ARG ARG A . n A 1 148 ASP 148 147 147 ASP ASP A . n A 1 149 LEU 149 148 148 LEU LEU A . n A 1 150 ARG 150 149 149 ARG ARG A . n A 1 151 GLY 151 150 150 GLY GLY A . n A 1 152 ALA 152 151 151 ALA ALA A . n A 1 153 PHE 153 152 152 PHE PHE A . n A 1 154 VAL 154 153 153 VAL VAL A . n A 1 155 GLU 155 154 154 GLU GLU A . n A 1 156 ASN 156 155 155 ASN ASN A . n A 1 157 PRO 157 156 156 PRO PRO A . n A 1 158 SER 158 157 157 SER SER A . n A 1 159 PHE 159 158 158 PHE PHE A . n A 1 160 LYS 160 159 159 LYS LYS A . n A 1 161 ARG 161 160 160 ARG ARG A . n A 1 162 GLN 162 161 161 GLN GLN A . n A 1 163 ILE 163 162 162 ILE ILE A . n A 1 164 ILE 164 163 163 ILE ILE A . n A 1 165 GLU 165 164 164 GLU GLU A . n A 1 166 LYS 166 165 165 LYS LYS A . n A 1 167 TYR 167 166 166 TYR TYR A . n A 1 168 VAL 168 167 167 VAL VAL A . n A 1 169 ILE 169 168 ? ? ? A . n A 1 170 ASP 170 169 ? ? ? A . n A 1 171 LYS 171 170 ? ? ? A . n A 1 172 ASN 172 171 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HOH 1 172 1 HOH WAT A . B 2 HOH 2 173 2 HOH WAT A . B 2 HOH 3 174 3 HOH WAT A . B 2 HOH 4 175 4 HOH WAT A . B 2 HOH 5 176 5 HOH WAT A . B 2 HOH 6 177 6 HOH WAT A . B 2 HOH 7 178 7 HOH WAT A . B 2 HOH 8 179 8 HOH WAT A . B 2 HOH 9 180 9 HOH WAT A . B 2 HOH 10 181 10 HOH WAT A . B 2 HOH 11 182 11 HOH WAT A . B 2 HOH 12 183 12 HOH WAT A . B 2 HOH 13 184 13 HOH WAT A . B 2 HOH 14 185 14 HOH WAT A . B 2 HOH 15 186 15 HOH WAT A . B 2 HOH 16 187 16 HOH WAT A . B 2 HOH 17 188 17 HOH WAT A . B 2 HOH 18 189 18 HOH WAT A . B 2 HOH 19 190 19 HOH WAT A . B 2 HOH 20 191 20 HOH WAT A . B 2 HOH 21 192 21 HOH WAT A . B 2 HOH 22 193 22 HOH WAT A . B 2 HOH 23 194 23 HOH WAT A . B 2 HOH 24 195 24 HOH WAT A . B 2 HOH 25 196 25 HOH WAT A . B 2 HOH 26 197 26 HOH WAT A . B 2 HOH 27 198 27 HOH WAT A . B 2 HOH 28 199 28 HOH WAT A . B 2 HOH 29 200 29 HOH WAT A . B 2 HOH 30 201 30 HOH WAT A . B 2 HOH 31 202 31 HOH WAT A . B 2 HOH 32 203 32 HOH WAT A . B 2 HOH 33 204 33 HOH WAT A . B 2 HOH 34 205 34 HOH WAT A . B 2 HOH 35 206 35 HOH WAT A . B 2 HOH 36 207 36 HOH WAT A . B 2 HOH 37 208 37 HOH WAT A . B 2 HOH 38 209 38 HOH WAT A . B 2 HOH 39 210 39 HOH WAT A . B 2 HOH 40 211 40 HOH WAT A . B 2 HOH 41 212 41 HOH WAT A . B 2 HOH 42 213 42 HOH WAT A . B 2 HOH 43 214 43 HOH WAT A . B 2 HOH 44 215 44 HOH WAT A . B 2 HOH 45 216 45 HOH WAT A . B 2 HOH 46 217 46 HOH WAT A . B 2 HOH 47 218 47 HOH WAT A . B 2 HOH 48 219 48 HOH WAT A . B 2 HOH 49 220 49 HOH WAT A . B 2 HOH 50 221 50 HOH WAT A . B 2 HOH 51 222 51 HOH WAT A . B 2 HOH 52 223 52 HOH WAT A . B 2 HOH 53 224 53 HOH WAT A . B 2 HOH 54 225 54 HOH WAT A . B 2 HOH 55 226 55 HOH WAT A . B 2 HOH 56 227 56 HOH WAT A . B 2 HOH 57 228 57 HOH WAT A . B 2 HOH 58 229 58 HOH WAT A . B 2 HOH 59 230 59 HOH WAT A . B 2 HOH 60 231 60 HOH WAT A . B 2 HOH 61 232 61 HOH WAT A . B 2 HOH 62 233 62 HOH WAT A . B 2 HOH 63 234 63 HOH WAT A . B 2 HOH 64 235 64 HOH WAT A . B 2 HOH 65 236 65 HOH WAT A . B 2 HOH 66 237 66 HOH WAT A . B 2 HOH 67 238 67 HOH WAT A . B 2 HOH 68 239 68 HOH WAT A . B 2 HOH 69 240 69 HOH WAT A . B 2 HOH 70 241 70 HOH WAT A . B 2 HOH 71 242 71 HOH WAT A . B 2 HOH 72 243 72 HOH WAT A . B 2 HOH 73 244 73 HOH WAT A . B 2 HOH 74 245 74 HOH WAT A . B 2 HOH 75 246 75 HOH WAT A . B 2 HOH 76 247 76 HOH WAT A . B 2 HOH 77 248 77 HOH WAT A . B 2 HOH 78 249 78 HOH WAT A . B 2 HOH 79 250 79 HOH WAT A . B 2 HOH 80 251 80 HOH WAT A . B 2 HOH 81 252 81 HOH WAT A . B 2 HOH 82 253 82 HOH WAT A . B 2 HOH 83 254 83 HOH WAT A . B 2 HOH 84 255 84 HOH WAT A . B 2 HOH 85 256 85 HOH WAT A . B 2 HOH 86 257 86 HOH WAT A . B 2 HOH 87 258 87 HOH WAT A . B 2 HOH 88 259 88 HOH WAT A . B 2 HOH 89 260 89 HOH WAT A . B 2 HOH 90 261 90 HOH WAT A . B 2 HOH 91 262 91 HOH WAT A . B 2 HOH 92 263 92 HOH WAT A . B 2 HOH 93 264 93 HOH WAT A . B 2 HOH 94 265 94 HOH WAT A . B 2 HOH 95 266 95 HOH WAT A . B 2 HOH 96 267 96 HOH WAT A . B 2 HOH 97 268 97 HOH WAT A . B 2 HOH 98 269 98 HOH WAT A . B 2 HOH 99 270 99 HOH WAT A . B 2 HOH 100 271 100 HOH WAT A . B 2 HOH 101 272 101 HOH WAT A . B 2 HOH 102 273 102 HOH WAT A . B 2 HOH 103 274 103 HOH WAT A . B 2 HOH 104 275 104 HOH WAT A . B 2 HOH 105 276 105 HOH WAT A . B 2 HOH 106 277 106 HOH WAT A . B 2 HOH 107 278 107 HOH WAT A . B 2 HOH 108 279 108 HOH WAT A . B 2 HOH 109 280 109 HOH WAT A . B 2 HOH 110 281 110 HOH WAT A . B 2 HOH 111 282 111 HOH WAT A . B 2 HOH 112 283 112 HOH WAT A . B 2 HOH 113 284 113 HOH WAT A . B 2 HOH 114 285 114 HOH WAT A . B 2 HOH 115 286 115 HOH WAT A . B 2 HOH 116 287 116 HOH WAT A . B 2 HOH 117 288 117 HOH WAT A . B 2 HOH 118 289 118 HOH WAT A . B 2 HOH 119 290 119 HOH WAT A . B 2 HOH 120 291 120 HOH WAT A . B 2 HOH 121 292 121 HOH WAT A . B 2 HOH 122 293 122 HOH WAT A . B 2 HOH 123 294 123 HOH WAT A . B 2 HOH 124 295 124 HOH WAT A . B 2 HOH 125 296 125 HOH WAT A . B 2 HOH 126 297 126 HOH WAT A . B 2 HOH 127 298 127 HOH WAT A . B 2 HOH 128 299 128 HOH WAT A . B 2 HOH 129 300 129 HOH WAT A . B 2 HOH 130 301 130 HOH WAT A . B 2 HOH 131 302 131 HOH WAT A . B 2 HOH 132 303 132 HOH WAT A . B 2 HOH 133 304 133 HOH WAT A . B 2 HOH 134 305 134 HOH WAT A . B 2 HOH 135 306 135 HOH WAT A . B 2 HOH 136 307 136 HOH WAT A . B 2 HOH 137 308 137 HOH WAT A . B 2 HOH 138 309 138 HOH WAT A . B 2 HOH 139 310 139 HOH WAT A . B 2 HOH 140 311 140 HOH WAT A . B 2 HOH 141 312 141 HOH WAT A . B 2 HOH 142 313 142 HOH WAT A . B 2 HOH 143 314 143 HOH WAT A . B 2 HOH 144 315 144 HOH WAT A . B 2 HOH 145 316 145 HOH WAT A . B 2 HOH 146 317 146 HOH WAT A . B 2 HOH 147 318 147 HOH WAT A . B 2 HOH 148 319 148 HOH WAT A . B 2 HOH 149 320 149 HOH WAT A . B 2 HOH 150 321 150 HOH WAT A . B 2 HOH 151 322 151 HOH WAT A . B 2 HOH 152 323 152 HOH WAT A . B 2 HOH 153 324 153 HOH WAT A . B 2 HOH 154 325 154 HOH WAT A . B 2 HOH 155 326 155 HOH WAT A . B 2 HOH 156 327 156 HOH WAT A . B 2 HOH 157 328 157 HOH WAT A . B 2 HOH 158 329 158 HOH WAT A . B 2 HOH 159 330 159 HOH WAT A . B 2 HOH 160 331 160 HOH WAT A . B 2 HOH 161 332 161 HOH WAT A . B 2 HOH 162 333 162 HOH WAT A . B 2 HOH 163 334 163 HOH WAT A . B 2 HOH 164 335 164 HOH WAT A . B 2 HOH 165 336 165 HOH WAT A . B 2 HOH 166 337 166 HOH WAT A . B 2 HOH 167 338 167 HOH WAT A . B 2 HOH 168 339 168 HOH WAT A . B 2 HOH 169 340 169 HOH WAT A . B 2 HOH 170 341 170 HOH WAT A . B 2 HOH 171 342 171 HOH WAT A . B 2 HOH 172 343 172 HOH WAT A . B 2 HOH 173 344 173 HOH WAT A . B 2 HOH 174 345 174 HOH WAT A . B 2 HOH 175 346 175 HOH WAT A . B 2 HOH 176 347 176 HOH WAT A . B 2 HOH 177 348 177 HOH WAT A . B 2 HOH 178 349 178 HOH WAT A . B 2 HOH 179 350 179 HOH WAT A . B 2 HOH 180 351 180 HOH WAT A . B 2 HOH 181 352 181 HOH WAT A . B 2 HOH 182 353 182 HOH WAT A . B 2 HOH 183 354 183 HOH WAT A . B 2 HOH 184 355 184 HOH WAT A . B 2 HOH 185 356 185 HOH WAT A . B 2 HOH 186 357 186 HOH WAT A . B 2 HOH 187 358 187 HOH WAT A . B 2 HOH 188 359 188 HOH WAT A . B 2 HOH 189 360 189 HOH WAT A . B 2 HOH 190 361 190 HOH WAT A . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 19 A MSE 18 ? MET SELENOMETHIONINE 2 A MSE 28 A MSE 27 ? MET SELENOMETHIONINE 3 A MSE 44 A MSE 43 ? MET SELENOMETHIONINE 4 A MSE 61 A MSE 60 ? MET SELENOMETHIONINE 5 A MSE 121 A MSE 120 ? MET SELENOMETHIONINE 6 A MSE 127 A MSE 126 ? MET SELENOMETHIONINE 7 A MSE 136 A MSE 135 ? MET SELENOMETHIONINE 8 A MSE 146 A MSE 145 ? MET SELENOMETHIONINE # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _pdbx_struct_special_symmetry.id 1 _pdbx_struct_special_symmetry.PDB_model_num 1 _pdbx_struct_special_symmetry.auth_asym_id A _pdbx_struct_special_symmetry.auth_comp_id HOH _pdbx_struct_special_symmetry.auth_seq_id 190 _pdbx_struct_special_symmetry.PDB_ins_code ? _pdbx_struct_special_symmetry.label_asym_id B _pdbx_struct_special_symmetry.label_comp_id HOH _pdbx_struct_special_symmetry.label_seq_id . # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2007-05-29 2 'Structure model' 1 1 2008-05-01 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2017-10-11 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' reflns_shell 2 4 'Structure model' software # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_reflns_shell.percent_possible_all' 2 4 'Structure model' '_software.name' # loop_ _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id _software.pdbx_ordinal REFMAC 5.2.0005 ? program 'Murshudov, G.N.' ccp4@dl.ac.uk refinement http://www.ccp4.ac.uk/main.html Fortran_77 ? 1 PDB_EXTRACT 2.000 'April. 3, 2006' package PDB sw-help@rcsb.rutgers.edu 'data extraction' http://pdb.rutgers.edu/software/ C++ ? 2 MAR345 . ? ? ? ? 'data collection' ? ? ? 3 HKL-2000 . ? ? ? ? 'data reduction' ? ? ? 4 HKL-2000 . ? ? ? ? 'data scaling' ? ? ? 5 SHARP . ? ? ? ? phasing ? ? ? 6 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 THR A 25 ? ? -119.92 -88.27 2 1 ASN A 38 ? ? -112.72 -168.66 3 1 LYS A 51 ? ? 67.59 60.25 4 1 CYS A 110 ? ? -126.13 -142.74 5 1 ASN A 115 ? ? -93.49 -63.44 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A SER 0 ? A SER 1 2 1 Y 1 A MET 1 ? A MET 2 3 1 Y 1 A ASP 2 ? A ASP 3 4 1 Y 1 A LYS 3 ? A LYS 4 5 1 Y 1 A LYS 4 ? A LYS 5 6 1 Y 1 A ILE 168 ? A ILE 169 7 1 Y 1 A ASP 169 ? A ASP 170 8 1 Y 1 A LYS 170 ? A LYS 171 9 1 Y 1 A ASN 171 ? A ASN 172 # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH #