data_2P58 # _entry.id 2P58 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.286 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 2P58 RCSB RCSB041981 WWPDB D_1000041981 # _pdbx_database_status.entry_id 2P58 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2007-03-14 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Sun, P.' 1 'Austin, B.P.' 2 'Tropea, J.E.' 3 'Waugh, D.S.' 4 # _citation.id primary _citation.title ;Structural characterization of the Yersinia pestis type III secretion system needle protein YscF in complex with its heterodimeric chaperone YscE/YscG. ; _citation.journal_abbrev J.Mol.Biol. _citation.journal_volume 377 _citation.page_first 819 _citation.page_last 830 _citation.year 2008 _citation.journal_id_ASTM JMOBAK _citation.country UK _citation.journal_id_ISSN 0022-2836 _citation.journal_id_CSD 0070 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 18281060 _citation.pdbx_database_id_DOI 10.1016/j.jmb.2007.12.067 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Sun, P.' 1 primary 'Tropea, J.E.' 2 primary 'Austin, B.P.' 3 primary 'Cherry, S.' 4 primary 'Waugh, D.S.' 5 # _cell.entry_id 2P58 _cell.length_a 74.500 _cell.length_b 94.540 _cell.length_c 31.300 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 2P58 _symmetry.space_group_name_H-M 'P 21 21 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Putative type III secretion protein YscE' 7673.239 1 ? ? 'YscE: Residues 10-63' ? 2 polymer man 'Putative type III secretion protein YscF' 9463.414 1 ? ? 'YscF: Residues 50-87' ? 3 polymer man 'Putative type III secretion protein YscG' 13313.736 1 ? ? 'YscG: Residues 3-114' ? 4 water nat water 18.015 227 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no yes ;TQLEEQLHNVETVRSIT(MSE)QLE(MSE)ALTKLKKD(MSE)(MSE)RGGDAKQYQVWQRESKALESAIAIIHYVAGDL K ; TQLEEQLHNVETVRSITMQLEMALTKLKKDMMRGGDAKQYQVWQRESKALESAIAIIHYVAGDLK A ? 2 'polypeptide(L)' no yes ;SNFSGFTKGTDIADLDAVAQTLKKPADDANKAVNDSIAALKDKPDNPALLADLQHSINKWSVIYNINSTIVRS(MSE)KD L(MSE)QGILQKFP ; ;SNFSGFTKGTDIADLDAVAQTLKKPADDANKAVNDSIAALKDKPDNPALLADLQHSINKWSVIYNINSTIVRSMKDLMQG ILQKFP ; B ? 3 'polypeptide(L)' no yes ;S(MSE)KYKLNVLLAEIALIGTGNHYHEEANCIAEWLHLKGEEEAVQLIRLSSL(MSE)NRGDYASALQQGNKLAYPDLE PWLALCEYRLGLGSALESRLNRLARSQDPRIQTFVNG(MSE)REQLKT ; ;SMKYKLNVLLAEIALIGTGNHYHEEANCIAEWLHLKGEEEAVQLIRLSSLMNRGDYASALQQGNKLAYPDLEPWLALCEY RLGLGSALESRLNRLARSQDPRIQTFVNGMREQLKT ; C ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 THR n 1 2 GLN n 1 3 LEU n 1 4 GLU n 1 5 GLU n 1 6 GLN n 1 7 LEU n 1 8 HIS n 1 9 ASN n 1 10 VAL n 1 11 GLU n 1 12 THR n 1 13 VAL n 1 14 ARG n 1 15 SER n 1 16 ILE n 1 17 THR n 1 18 MSE n 1 19 GLN n 1 20 LEU n 1 21 GLU n 1 22 MSE n 1 23 ALA n 1 24 LEU n 1 25 THR n 1 26 LYS n 1 27 LEU n 1 28 LYS n 1 29 LYS n 1 30 ASP n 1 31 MSE n 1 32 MSE n 1 33 ARG n 1 34 GLY n 1 35 GLY n 1 36 ASP n 1 37 ALA n 1 38 LYS n 1 39 GLN n 1 40 TYR n 1 41 GLN n 1 42 VAL n 1 43 TRP n 1 44 GLN n 1 45 ARG n 1 46 GLU n 1 47 SER n 1 48 LYS n 1 49 ALA n 1 50 LEU n 1 51 GLU n 1 52 SER n 1 53 ALA n 1 54 ILE n 1 55 ALA n 1 56 ILE n 1 57 ILE n 1 58 HIS n 1 59 TYR n 1 60 VAL n 1 61 ALA n 1 62 GLY n 1 63 ASP n 1 64 LEU n 1 65 LYS n 2 1 SER n 2 2 ASN n 2 3 PHE n 2 4 SER n 2 5 GLY n 2 6 PHE n 2 7 THR n 2 8 LYS n 2 9 GLY n 2 10 THR n 2 11 ASP n 2 12 ILE n 2 13 ALA n 2 14 ASP n 2 15 LEU n 2 16 ASP n 2 17 ALA n 2 18 VAL n 2 19 ALA n 2 20 GLN n 2 21 THR n 2 22 LEU n 2 23 LYS n 2 24 LYS n 2 25 PRO n 2 26 ALA n 2 27 ASP n 2 28 ASP n 2 29 ALA n 2 30 ASN n 2 31 LYS n 2 32 ALA n 2 33 VAL n 2 34 ASN n 2 35 ASP n 2 36 SER n 2 37 ILE n 2 38 ALA n 2 39 ALA n 2 40 LEU n 2 41 LYS n 2 42 ASP n 2 43 LYS n 2 44 PRO n 2 45 ASP n 2 46 ASN n 2 47 PRO n 2 48 ALA n 2 49 LEU n 2 50 LEU n 2 51 ALA n 2 52 ASP n 2 53 LEU n 2 54 GLN n 2 55 HIS n 2 56 SER n 2 57 ILE n 2 58 ASN n 2 59 LYS n 2 60 TRP n 2 61 SER n 2 62 VAL n 2 63 ILE n 2 64 TYR n 2 65 ASN n 2 66 ILE n 2 67 ASN n 2 68 SER n 2 69 THR n 2 70 ILE n 2 71 VAL n 2 72 ARG n 2 73 SER n 2 74 MSE n 2 75 LYS n 2 76 ASP n 2 77 LEU n 2 78 MSE n 2 79 GLN n 2 80 GLY n 2 81 ILE n 2 82 LEU n 2 83 GLN n 2 84 LYS n 2 85 PHE n 2 86 PRO n 3 1 SER n 3 2 MSE n 3 3 LYS n 3 4 TYR n 3 5 LYS n 3 6 LEU n 3 7 ASN n 3 8 VAL n 3 9 LEU n 3 10 LEU n 3 11 ALA n 3 12 GLU n 3 13 ILE n 3 14 ALA n 3 15 LEU n 3 16 ILE n 3 17 GLY n 3 18 THR n 3 19 GLY n 3 20 ASN n 3 21 HIS n 3 22 TYR n 3 23 HIS n 3 24 GLU n 3 25 GLU n 3 26 ALA n 3 27 ASN n 3 28 CYS n 3 29 ILE n 3 30 ALA n 3 31 GLU n 3 32 TRP n 3 33 LEU n 3 34 HIS n 3 35 LEU n 3 36 LYS n 3 37 GLY n 3 38 GLU n 3 39 GLU n 3 40 GLU n 3 41 ALA n 3 42 VAL n 3 43 GLN n 3 44 LEU n 3 45 ILE n 3 46 ARG n 3 47 LEU n 3 48 SER n 3 49 SER n 3 50 LEU n 3 51 MSE n 3 52 ASN n 3 53 ARG n 3 54 GLY n 3 55 ASP n 3 56 TYR n 3 57 ALA n 3 58 SER n 3 59 ALA n 3 60 LEU n 3 61 GLN n 3 62 GLN n 3 63 GLY n 3 64 ASN n 3 65 LYS n 3 66 LEU n 3 67 ALA n 3 68 TYR n 3 69 PRO n 3 70 ASP n 3 71 LEU n 3 72 GLU n 3 73 PRO n 3 74 TRP n 3 75 LEU n 3 76 ALA n 3 77 LEU n 3 78 CYS n 3 79 GLU n 3 80 TYR n 3 81 ARG n 3 82 LEU n 3 83 GLY n 3 84 LEU n 3 85 GLY n 3 86 SER n 3 87 ALA n 3 88 LEU n 3 89 GLU n 3 90 SER n 3 91 ARG n 3 92 LEU n 3 93 ASN n 3 94 ARG n 3 95 LEU n 3 96 ALA n 3 97 ARG n 3 98 SER n 3 99 GLN n 3 100 ASP n 3 101 PRO n 3 102 ARG n 3 103 ILE n 3 104 GLN n 3 105 THR n 3 106 PHE n 3 107 VAL n 3 108 ASN n 3 109 GLY n 3 110 MSE n 3 111 ARG n 3 112 GLU n 3 113 GLN n 3 114 LEU n 3 115 LYS n 3 116 THR n # loop_ _entity_src_gen.entity_id _entity_src_gen.pdbx_src_id _entity_src_gen.pdbx_alt_source_flag _entity_src_gen.pdbx_seq_type _entity_src_gen.pdbx_beg_seq_num _entity_src_gen.pdbx_end_seq_num _entity_src_gen.gene_src_common_name _entity_src_gen.gene_src_genus _entity_src_gen.pdbx_gene_src_gene _entity_src_gen.gene_src_species _entity_src_gen.gene_src_strain _entity_src_gen.gene_src_tissue _entity_src_gen.gene_src_tissue_fraction _entity_src_gen.gene_src_details _entity_src_gen.pdbx_gene_src_fragment _entity_src_gen.pdbx_gene_src_scientific_name _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id _entity_src_gen.pdbx_gene_src_variant _entity_src_gen.pdbx_gene_src_cell_line _entity_src_gen.pdbx_gene_src_atcc _entity_src_gen.pdbx_gene_src_organ _entity_src_gen.pdbx_gene_src_organelle _entity_src_gen.pdbx_gene_src_cell _entity_src_gen.pdbx_gene_src_cellular_location _entity_src_gen.host_org_common_name _entity_src_gen.pdbx_host_org_scientific_name _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id _entity_src_gen.host_org_genus _entity_src_gen.pdbx_host_org_gene _entity_src_gen.pdbx_host_org_organ _entity_src_gen.host_org_species _entity_src_gen.pdbx_host_org_tissue _entity_src_gen.pdbx_host_org_tissue_fraction _entity_src_gen.pdbx_host_org_strain _entity_src_gen.pdbx_host_org_variant _entity_src_gen.pdbx_host_org_cell_line _entity_src_gen.pdbx_host_org_atcc _entity_src_gen.pdbx_host_org_culture_collection _entity_src_gen.pdbx_host_org_cell _entity_src_gen.pdbx_host_org_organelle _entity_src_gen.pdbx_host_org_cellular_location _entity_src_gen.pdbx_host_org_vector_type _entity_src_gen.pdbx_host_org_vector _entity_src_gen.host_org_details _entity_src_gen.expression_system_id _entity_src_gen.plasmid_name _entity_src_gen.plasmid_details _entity_src_gen.pdbx_description 1 1 sample ? ? ? ? Yersinia 'yscE, YPCD1.54, pCD29' ? 'CO-92, Biovar Orientalis' ? ? ? ? 'Yersinia pestis' 632 ? ? ? ? ? ? ? ? 'Escherichia coli' 562 Escherichia ? ? ? ? ? 'B834(DE3)' ? ? ? ? ? ? ? plasmid ? ? ? pBA1578 ? ? 2 1 sample ? ? ? ? Yersinia 'yscF, YPCD1.55, pCD28' ? 'CO-92, Biovar Orientalis' ? ? ? ? 'Yersinia pestis' 632 ? ? ? ? ? ? ? ? 'Escherichia coli' 562 Escherichia ? ? ? ? ? 'B834(DE3)' ? ? ? ? ? ? ? plasmid ? ? ? pYscF2 ? ? 3 1 sample ? ? ? ? Yersinia 'yscG, YPCD1.56, pCD27' ? 'CO-92, Biovar Orientalis' ? ? ? ? 'Yersinia pestis' 632 ? ? ? ? ? ? ? ? 'Escherichia coli' 562 Escherichia ? ? ? ? ? 'B834(DE3)' ? ? ? ? ? ? ? plasmid ? ? ? pBA1578 ? ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform 1 UNP Q7ARI1_YERPE Q7ARI1 1 TQLEEQLHNVETVRSITMQLEMALTKLKKDMMRGGDAKQYQVWQRESKALESAIAIIHYVAGDLK 2 ? 2 UNP Q7ARI0_YERPE Q7ARI0 2 ;SNFSGFTKGTDIADLDAVAQTLKKPADDANKAVNDSIAALKDKPDNPALLADLQHSINKWSVIYNINSTIVRSMKDLMQG ILQKFP ; 2 ? 3 UNP Q7ARH9_YERPE Q7ARH9 3 ;MKYKLNVLLAEIALIGTGNHYHEEANCIAEWLHLKGEEEAVQLIRLSSLMNRGDYASALQQGNKLAYPDLEPWLALCEYR LGLGSALESRLNRLARSQDPRIQTFVNGMREQLKT ; 1 ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 2P58 A 1 ? 65 ? Q7ARI1 2 ? 66 ? 2 66 2 2 2P58 B 1 ? 86 ? Q7ARI0 2 ? 87 ? 2 87 3 3 2P58 C 2 ? 116 ? Q7ARH9 1 ? 115 ? 1 115 # _struct_ref_seq_dif.align_id 3 _struct_ref_seq_dif.pdbx_pdb_id_code 2P58 _struct_ref_seq_dif.mon_id SER _struct_ref_seq_dif.pdbx_pdb_strand_id C _struct_ref_seq_dif.seq_num 1 _struct_ref_seq_dif.pdbx_pdb_ins_code ? _struct_ref_seq_dif.pdbx_seq_db_name UNP _struct_ref_seq_dif.pdbx_seq_db_accession_code Q7ARH9 _struct_ref_seq_dif.db_mon_id ? _struct_ref_seq_dif.pdbx_seq_db_seq_num ? _struct_ref_seq_dif.details 'EXPRESSION TAG' _struct_ref_seq_dif.pdbx_auth_seq_num 0 _struct_ref_seq_dif.pdbx_ordinal 1 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.crystals_number 1 _exptl.entry_id 2P58 _exptl.method 'X-RAY DIFFRACTION' # _exptl_crystal.id 1 _exptl_crystal.density_Matthews 1.835 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 32.967 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.pH ? _exptl_crystal_grow.temp 291 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_details '0.2M Ammonium fluoride, 20% PEG3350, VAPOR DIFFUSION, SITTING DROP, temperature 291K' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'MARMOSAIC 300 mm CCD' _diffrn_detector.pdbx_collection_date 2006-10-14 _diffrn_detector.details mirror # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.monochromator silicon _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.97928 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'APS BEAMLINE 22-ID' _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.97928 _diffrn_source.pdbx_synchrotron_site APS _diffrn_source.pdbx_synchrotron_beamline 22-ID # _reflns.entry_id 2P58 _reflns.d_resolution_high 1.800 _reflns.d_resolution_low 50.000 _reflns.number_obs 21105 _reflns.pdbx_Rmerge_I_obs 0.101 _reflns.pdbx_netI_over_sigmaI 16.200 _reflns.pdbx_chi_squared 1.060 _reflns.pdbx_redundancy 6.500 _reflns.percent_possible_obs 98.600 _reflns.observed_criterion_sigma_F 0 _reflns.observed_criterion_sigma_I 0 _reflns.number_all 21105 _reflns.pdbx_Rsym_value ? _reflns.B_iso_Wilson_estimate 20.5 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 1.80 _reflns_shell.d_res_low 1.86 _reflns_shell.number_measured_obs ? _reflns_shell.number_measured_all ? _reflns_shell.number_unique_obs ? _reflns_shell.Rmerge_I_obs 0.367 _reflns_shell.meanI_over_sigI_obs 4.28 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared 1.139 _reflns_shell.pdbx_redundancy 4.60 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 1992 _reflns_shell.percent_possible_all 95.10 _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 2P58 _refine.ls_d_res_high 1.800 _refine.ls_d_res_low 50.000 _refine.pdbx_ls_sigma_F 0.00 _refine.ls_percent_reflns_obs 95.800 _refine.ls_number_reflns_obs 20372 _refine.ls_R_factor_R_work 0.1901 _refine.ls_R_factor_R_free 0.2214 _refine.ls_percent_reflns_R_free 9.400 _refine.ls_number_reflns_R_free 2001 _refine.B_iso_mean 27.677 _refine.solvent_model_param_bsol 41.347 _refine.aniso_B[1][1] -8.365 _refine.aniso_B[2][2] 3.483 _refine.aniso_B[3][3] 4.883 _refine.aniso_B[1][2] 0.000 _refine.aniso_B[1][3] 0.000 _refine.aniso_B[2][3] 0.000 _refine.pdbx_method_to_determine_struct SAD _refine.pdbx_ls_sigma_I 0 _refine.ls_number_reflns_all 20372 _refine.ls_R_factor_all 0.1901 _refine.ls_R_factor_obs 0.1901 _refine.ls_redundancy_reflns_obs ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_starting_model ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details random _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_stereochemistry_target_values 'Engh & Huber' _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.pdbx_isotropic_thermal_model RESTRAINED _refine.details ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_overall_ESU_R ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 2P58 _refine_analyze.Luzzati_coordinate_error_obs 0.19 _refine_analyze.Luzzati_sigma_a_obs 0.12 _refine_analyze.Luzzati_d_res_low_obs 5 _refine_analyze.Luzzati_coordinate_error_free 0.23 _refine_analyze.Luzzati_sigma_a_free 0.16 _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.pdbx_Luzzati_d_res_high_obs ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1632 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 227 _refine_hist.number_atoms_total 1859 _refine_hist.d_res_high 1.800 _refine_hist.d_res_low 50.000 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function c_mcbond_it ? 1.476 1.500 ? 'X-RAY DIFFRACTION' ? c_scbond_it ? 2.752 2.000 ? 'X-RAY DIFFRACTION' ? c_mcangle_it ? 2.224 2.000 ? 'X-RAY DIFFRACTION' ? c_scangle_it ? 4.169 2.500 ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.d_res_high 1.80 _refine_ls_shell.d_res_low 1.86 _refine_ls_shell.number_reflns_obs 1992 _refine_ls_shell.number_reflns_R_free 174 _refine_ls_shell.R_factor_R_work 0.221 _refine_ls_shell.R_factor_R_free 0.274 _refine_ls_shell.R_factor_R_free_error 0.021 _refine_ls_shell.percent_reflns_obs 87.6 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.pdbx_total_number_of_bins_used ? _refine_ls_shell.number_reflns_R_work ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # loop_ _pdbx_xplor_file.serial_no _pdbx_xplor_file.param_file _pdbx_xplor_file.topol_file _pdbx_xplor_file.pdbx_refine_id 1 CNS_TOPPAR:protein_rep.param ? 'X-RAY DIFFRACTION' 2 CNS_TOPPAR:water_rep.param ? 'X-RAY DIFFRACTION' 3 CNS_TOPPAR:ion.param ? 'X-RAY DIFFRACTION' # _struct.entry_id 2P58 _struct.title 'Structure of the Yersinia pestis Type III secretion system needle protein YscF in complex with its chaperones YscE/YscG' _struct.pdbx_descriptor 'Putative type III secretion protein' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2P58 _struct_keywords.pdbx_keywords 'TRANSPORT PROTEIN/CHAPERONE' _struct_keywords.text 'type III secretion system, needle protein, YscE, YscF, YscG, TRANSPORT PROTEIN-CHAPERONE COMPLEX' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 4 ? F N N 4 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ASN A 9 ? MSE A 31 ? ASN A 10 MSE A 32 1 ? 23 HELX_P HELX_P2 2 ASP A 36 ? ALA A 61 ? ASP A 37 ALA A 62 1 ? 26 HELX_P HELX_P3 3 LEU B 50 ? ASN B 58 ? LEU B 51 ASN B 59 1 ? 9 HELX_P HELX_P4 4 LYS B 59 ? ASN B 65 ? LYS B 60 ASN B 66 1 ? 7 HELX_P HELX_P5 5 ASN B 67 ? LYS B 84 ? ASN B 68 LYS B 85 1 ? 18 HELX_P HELX_P6 6 LYS C 5 ? GLY C 19 ? LYS C 4 GLY C 18 1 ? 15 HELX_P HELX_P7 7 TYR C 22 ? LYS C 36 ? TYR C 21 LYS C 35 1 ? 15 HELX_P HELX_P8 8 GLU C 38 ? ARG C 53 ? GLU C 37 ARG C 52 1 ? 16 HELX_P HELX_P9 9 ASP C 55 ? ASN C 64 ? ASP C 54 ASN C 63 1 ? 10 HELX_P HELX_P10 10 TYR C 68 ? ASP C 70 ? TYR C 67 ASP C 69 5 ? 3 HELX_P HELX_P11 11 LEU C 71 ? GLY C 83 ? LEU C 70 GLY C 82 1 ? 13 HELX_P HELX_P12 12 LEU C 84 ? ALA C 96 ? LEU C 83 ALA C 95 1 ? 13 HELX_P HELX_P13 13 ASP C 100 ? LYS C 115 ? ASP C 99 LYS C 114 1 ? 16 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale1 covale ? ? A THR 17 C ? ? ? 1_555 A MSE 18 N ? ? A THR 18 A MSE 19 1_555 ? ? ? ? ? ? ? 1.326 ? covale2 covale ? ? A MSE 18 C ? ? ? 1_555 A GLN 19 N ? ? A MSE 19 A GLN 20 1_555 ? ? ? ? ? ? ? 1.337 ? covale3 covale ? ? A GLU 21 C ? ? ? 1_555 A MSE 22 N ? ? A GLU 22 A MSE 23 1_555 ? ? ? ? ? ? ? 1.327 ? covale4 covale ? ? A MSE 22 C ? ? ? 1_555 A ALA 23 N ? ? A MSE 23 A ALA 24 1_555 ? ? ? ? ? ? ? 1.331 ? covale5 covale ? ? A ASP 30 C ? ? ? 1_555 A MSE 31 N ? ? A ASP 31 A MSE 32 1_555 ? ? ? ? ? ? ? 1.325 ? covale6 covale ? ? A MSE 31 C ? ? ? 1_555 A MSE 32 N ? ? A MSE 32 A MSE 33 1_555 ? ? ? ? ? ? ? 1.325 ? covale7 covale ? ? A MSE 32 C ? ? ? 1_555 A ARG 33 N ? ? A MSE 33 A ARG 34 1_555 ? ? ? ? ? ? ? 1.332 ? covale8 covale ? ? B SER 73 C ? ? ? 1_555 B MSE 74 N ? ? B SER 74 B MSE 75 1_555 ? ? ? ? ? ? ? 1.327 ? covale9 covale ? ? B MSE 74 C ? ? ? 1_555 B LYS 75 N ? ? B MSE 75 B LYS 76 1_555 ? ? ? ? ? ? ? 1.331 ? covale10 covale ? ? B LEU 77 C ? ? ? 1_555 B MSE 78 N ? ? B LEU 78 B MSE 79 1_555 ? ? ? ? ? ? ? 1.333 ? covale11 covale ? ? B MSE 78 C ? ? ? 1_555 B GLN 79 N ? ? B MSE 79 B GLN 80 1_555 ? ? ? ? ? ? ? 1.328 ? covale12 covale ? ? C LEU 50 C ? ? ? 1_555 C MSE 51 N ? ? C LEU 49 C MSE 50 1_555 ? ? ? ? ? ? ? 1.328 ? covale13 covale ? ? C MSE 51 C ? ? ? 1_555 C ASN 52 N ? ? C MSE 50 C ASN 51 1_555 ? ? ? ? ? ? ? 1.328 ? covale14 covale ? ? C GLY 109 C ? ? ? 1_555 C MSE 110 N ? ? C GLY 108 C MSE 109 1_555 ? ? ? ? ? ? ? 1.335 ? covale15 covale ? ? C MSE 110 C ? ? ? 1_555 C ARG 111 N ? ? C MSE 109 C ARG 110 1_555 ? ? ? ? ? ? ? 1.326 ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # _atom_sites.entry_id 2P58 _atom_sites.fract_transf_matrix[1][1] 0.013423 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.010578 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.031949 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 THR 1 2 ? ? ? A . n A 1 2 GLN 2 3 ? ? ? A . n A 1 3 LEU 3 4 ? ? ? A . n A 1 4 GLU 4 5 ? ? ? A . n A 1 5 GLU 5 6 ? ? ? A . n A 1 6 GLN 6 7 ? ? ? A . n A 1 7 LEU 7 8 ? ? ? A . n A 1 8 HIS 8 9 ? ? ? A . n A 1 9 ASN 9 10 10 ASN ASN A . n A 1 10 VAL 10 11 11 VAL VAL A . n A 1 11 GLU 11 12 12 GLU GLU A . n A 1 12 THR 12 13 13 THR THR A . n A 1 13 VAL 13 14 14 VAL VAL A . n A 1 14 ARG 14 15 15 ARG ARG A . n A 1 15 SER 15 16 16 SER SER A . n A 1 16 ILE 16 17 17 ILE ILE A . n A 1 17 THR 17 18 18 THR THR A . n A 1 18 MSE 18 19 19 MSE MSE A . n A 1 19 GLN 19 20 20 GLN GLN A . n A 1 20 LEU 20 21 21 LEU LEU A . n A 1 21 GLU 21 22 22 GLU GLU A . n A 1 22 MSE 22 23 23 MSE MSE A . n A 1 23 ALA 23 24 24 ALA ALA A . n A 1 24 LEU 24 25 25 LEU LEU A . n A 1 25 THR 25 26 26 THR THR A . n A 1 26 LYS 26 27 27 LYS LYS A . n A 1 27 LEU 27 28 28 LEU LEU A . n A 1 28 LYS 28 29 29 LYS LYS A . n A 1 29 LYS 29 30 30 LYS LYS A . n A 1 30 ASP 30 31 31 ASP ASP A . n A 1 31 MSE 31 32 32 MSE MSE A . n A 1 32 MSE 32 33 33 MSE MSE A . n A 1 33 ARG 33 34 34 ARG ARG A . n A 1 34 GLY 34 35 35 GLY GLY A . n A 1 35 GLY 35 36 36 GLY GLY A . n A 1 36 ASP 36 37 37 ASP ASP A . n A 1 37 ALA 37 38 38 ALA ALA A . n A 1 38 LYS 38 39 39 LYS LYS A . n A 1 39 GLN 39 40 40 GLN GLN A . n A 1 40 TYR 40 41 41 TYR TYR A . n A 1 41 GLN 41 42 42 GLN GLN A . n A 1 42 VAL 42 43 43 VAL VAL A . n A 1 43 TRP 43 44 44 TRP TRP A . n A 1 44 GLN 44 45 45 GLN GLN A . n A 1 45 ARG 45 46 46 ARG ARG A . n A 1 46 GLU 46 47 47 GLU GLU A . n A 1 47 SER 47 48 48 SER SER A . n A 1 48 LYS 48 49 49 LYS LYS A . n A 1 49 ALA 49 50 50 ALA ALA A . n A 1 50 LEU 50 51 51 LEU LEU A . n A 1 51 GLU 51 52 52 GLU GLU A . n A 1 52 SER 52 53 53 SER SER A . n A 1 53 ALA 53 54 54 ALA ALA A . n A 1 54 ILE 54 55 55 ILE ILE A . n A 1 55 ALA 55 56 56 ALA ALA A . n A 1 56 ILE 56 57 57 ILE ILE A . n A 1 57 ILE 57 58 58 ILE ILE A . n A 1 58 HIS 58 59 59 HIS HIS A . n A 1 59 TYR 59 60 60 TYR TYR A . n A 1 60 VAL 60 61 61 VAL VAL A . n A 1 61 ALA 61 62 62 ALA ALA A . n A 1 62 GLY 62 63 63 GLY GLY A . n A 1 63 ASP 63 64 ? ? ? A . n A 1 64 LEU 64 65 ? ? ? A . n A 1 65 LYS 65 66 ? ? ? A . n B 2 1 SER 1 2 ? ? ? B . n B 2 2 ASN 2 3 ? ? ? B . n B 2 3 PHE 3 4 ? ? ? B . n B 2 4 SER 4 5 ? ? ? B . n B 2 5 GLY 5 6 ? ? ? B . n B 2 6 PHE 6 7 ? ? ? B . n B 2 7 THR 7 8 ? ? ? B . n B 2 8 LYS 8 9 ? ? ? B . n B 2 9 GLY 9 10 ? ? ? B . n B 2 10 THR 10 11 ? ? ? B . n B 2 11 ASP 11 12 ? ? ? B . n B 2 12 ILE 12 13 ? ? ? B . n B 2 13 ALA 13 14 ? ? ? B . n B 2 14 ASP 14 15 ? ? ? B . n B 2 15 LEU 15 16 ? ? ? B . n B 2 16 ASP 16 17 ? ? ? B . n B 2 17 ALA 17 18 ? ? ? B . n B 2 18 VAL 18 19 ? ? ? B . n B 2 19 ALA 19 20 ? ? ? B . n B 2 20 GLN 20 21 ? ? ? B . n B 2 21 THR 21 22 ? ? ? B . n B 2 22 LEU 22 23 ? ? ? B . n B 2 23 LYS 23 24 ? ? ? B . n B 2 24 LYS 24 25 ? ? ? B . n B 2 25 PRO 25 26 ? ? ? B . n B 2 26 ALA 26 27 ? ? ? B . n B 2 27 ASP 27 28 ? ? ? B . n B 2 28 ASP 28 29 ? ? ? B . n B 2 29 ALA 29 30 ? ? ? B . n B 2 30 ASN 30 31 ? ? ? B . n B 2 31 LYS 31 32 ? ? ? B . n B 2 32 ALA 32 33 ? ? ? B . n B 2 33 VAL 33 34 ? ? ? B . n B 2 34 ASN 34 35 ? ? ? B . n B 2 35 ASP 35 36 ? ? ? B . n B 2 36 SER 36 37 ? ? ? B . n B 2 37 ILE 37 38 ? ? ? B . n B 2 38 ALA 38 39 ? ? ? B . n B 2 39 ALA 39 40 ? ? ? B . n B 2 40 LEU 40 41 ? ? ? B . n B 2 41 LYS 41 42 ? ? ? B . n B 2 42 ASP 42 43 ? ? ? B . n B 2 43 LYS 43 44 ? ? ? B . n B 2 44 PRO 44 45 ? ? ? B . n B 2 45 ASP 45 46 ? ? ? B . n B 2 46 ASN 46 47 ? ? ? B . n B 2 47 PRO 47 48 ? ? ? B . n B 2 48 ALA 48 49 ? ? ? B . n B 2 49 LEU 49 50 50 LEU LEU B . n B 2 50 LEU 50 51 51 LEU LEU B . n B 2 51 ALA 51 52 52 ALA ALA B . n B 2 52 ASP 52 53 53 ASP ASP B . n B 2 53 LEU 53 54 54 LEU LEU B . n B 2 54 GLN 54 55 55 GLN GLN B . n B 2 55 HIS 55 56 56 HIS HIS B . n B 2 56 SER 56 57 57 SER SER B . n B 2 57 ILE 57 58 58 ILE ILE B . n B 2 58 ASN 58 59 59 ASN ASN B . n B 2 59 LYS 59 60 60 LYS LYS B . n B 2 60 TRP 60 61 61 TRP TRP B . n B 2 61 SER 61 62 62 SER SER B . n B 2 62 VAL 62 63 63 VAL VAL B . n B 2 63 ILE 63 64 64 ILE ILE B . n B 2 64 TYR 64 65 65 TYR TYR B . n B 2 65 ASN 65 66 66 ASN ASN B . n B 2 66 ILE 66 67 67 ILE ILE B . n B 2 67 ASN 67 68 68 ASN ASN B . n B 2 68 SER 68 69 69 SER SER B . n B 2 69 THR 69 70 70 THR THR B . n B 2 70 ILE 70 71 71 ILE ILE B . n B 2 71 VAL 71 72 72 VAL VAL B . n B 2 72 ARG 72 73 73 ARG ARG B . n B 2 73 SER 73 74 74 SER SER B . n B 2 74 MSE 74 75 75 MSE MSE B . n B 2 75 LYS 75 76 76 LYS LYS B . n B 2 76 ASP 76 77 77 ASP ASP B . n B 2 77 LEU 77 78 78 LEU LEU B . n B 2 78 MSE 78 79 79 MSE MSE B . n B 2 79 GLN 79 80 80 GLN GLN B . n B 2 80 GLY 80 81 81 GLY GLY B . n B 2 81 ILE 81 82 82 ILE ILE B . n B 2 82 LEU 82 83 83 LEU LEU B . n B 2 83 GLN 83 84 84 GLN GLN B . n B 2 84 LYS 84 85 85 LYS LYS B . n B 2 85 PHE 85 86 86 PHE PHE B . n B 2 86 PRO 86 87 87 PRO PRO B . n C 3 1 SER 1 0 ? ? ? C . n C 3 2 MSE 2 1 ? ? ? C . n C 3 3 LYS 3 2 ? ? ? C . n C 3 4 TYR 4 3 3 TYR TYR C . n C 3 5 LYS 5 4 4 LYS LYS C . n C 3 6 LEU 6 5 5 LEU LEU C . n C 3 7 ASN 7 6 6 ASN ASN C . n C 3 8 VAL 8 7 7 VAL VAL C . n C 3 9 LEU 9 8 8 LEU LEU C . n C 3 10 LEU 10 9 9 LEU LEU C . n C 3 11 ALA 11 10 10 ALA ALA C . n C 3 12 GLU 12 11 11 GLU GLU C . n C 3 13 ILE 13 12 12 ILE ILE C . n C 3 14 ALA 14 13 13 ALA ALA C . n C 3 15 LEU 15 14 14 LEU LEU C . n C 3 16 ILE 16 15 15 ILE ILE C . n C 3 17 GLY 17 16 16 GLY GLY C . n C 3 18 THR 18 17 17 THR THR C . n C 3 19 GLY 19 18 18 GLY GLY C . n C 3 20 ASN 20 19 19 ASN ASN C . n C 3 21 HIS 21 20 20 HIS HIS C . n C 3 22 TYR 22 21 21 TYR TYR C . n C 3 23 HIS 23 22 22 HIS HIS C . n C 3 24 GLU 24 23 23 GLU GLU C . n C 3 25 GLU 25 24 24 GLU GLU C . n C 3 26 ALA 26 25 25 ALA ALA C . n C 3 27 ASN 27 26 26 ASN ASN C . n C 3 28 CYS 28 27 27 CYS CYS C . n C 3 29 ILE 29 28 28 ILE ILE C . n C 3 30 ALA 30 29 29 ALA ALA C . n C 3 31 GLU 31 30 30 GLU GLU C . n C 3 32 TRP 32 31 31 TRP TRP C . n C 3 33 LEU 33 32 32 LEU LEU C . n C 3 34 HIS 34 33 33 HIS HIS C . n C 3 35 LEU 35 34 34 LEU LEU C . n C 3 36 LYS 36 35 35 LYS LYS C . n C 3 37 GLY 37 36 36 GLY GLY C . n C 3 38 GLU 38 37 37 GLU GLU C . n C 3 39 GLU 39 38 38 GLU GLU C . n C 3 40 GLU 40 39 39 GLU GLU C . n C 3 41 ALA 41 40 40 ALA ALA C . n C 3 42 VAL 42 41 41 VAL VAL C . n C 3 43 GLN 43 42 42 GLN GLN C . n C 3 44 LEU 44 43 43 LEU LEU C . n C 3 45 ILE 45 44 44 ILE ILE C . n C 3 46 ARG 46 45 45 ARG ARG C . n C 3 47 LEU 47 46 46 LEU LEU C . n C 3 48 SER 48 47 47 SER SER C . n C 3 49 SER 49 48 48 SER SER C . n C 3 50 LEU 50 49 49 LEU LEU C . n C 3 51 MSE 51 50 50 MSE MSE C . n C 3 52 ASN 52 51 51 ASN ASN C . n C 3 53 ARG 53 52 52 ARG ARG C . n C 3 54 GLY 54 53 53 GLY GLY C . n C 3 55 ASP 55 54 54 ASP ASP C . n C 3 56 TYR 56 55 55 TYR TYR C . n C 3 57 ALA 57 56 56 ALA ALA C . n C 3 58 SER 58 57 57 SER SER C . n C 3 59 ALA 59 58 58 ALA ALA C . n C 3 60 LEU 60 59 59 LEU LEU C . n C 3 61 GLN 61 60 60 GLN GLN C . n C 3 62 GLN 62 61 61 GLN GLN C . n C 3 63 GLY 63 62 62 GLY GLY C . n C 3 64 ASN 64 63 63 ASN ASN C . n C 3 65 LYS 65 64 64 LYS LYS C . n C 3 66 LEU 66 65 65 LEU LEU C . n C 3 67 ALA 67 66 66 ALA ALA C . n C 3 68 TYR 68 67 67 TYR TYR C . n C 3 69 PRO 69 68 68 PRO PRO C . n C 3 70 ASP 70 69 69 ASP ASP C . n C 3 71 LEU 71 70 70 LEU LEU C . n C 3 72 GLU 72 71 71 GLU GLU C . n C 3 73 PRO 73 72 72 PRO PRO C . n C 3 74 TRP 74 73 73 TRP TRP C . n C 3 75 LEU 75 74 74 LEU LEU C . n C 3 76 ALA 76 75 75 ALA ALA C . n C 3 77 LEU 77 76 76 LEU LEU C . n C 3 78 CYS 78 77 77 CYS CYS C . n C 3 79 GLU 79 78 78 GLU GLU C . n C 3 80 TYR 80 79 79 TYR TYR C . n C 3 81 ARG 81 80 80 ARG ARG C . n C 3 82 LEU 82 81 81 LEU LEU C . n C 3 83 GLY 83 82 82 GLY GLY C . n C 3 84 LEU 84 83 83 LEU LEU C . n C 3 85 GLY 85 84 84 GLY GLY C . n C 3 86 SER 86 85 85 SER SER C . n C 3 87 ALA 87 86 86 ALA ALA C . n C 3 88 LEU 88 87 87 LEU LEU C . n C 3 89 GLU 89 88 88 GLU GLU C . n C 3 90 SER 90 89 89 SER SER C . n C 3 91 ARG 91 90 90 ARG ARG C . n C 3 92 LEU 92 91 91 LEU LEU C . n C 3 93 ASN 93 92 92 ASN ASN C . n C 3 94 ARG 94 93 93 ARG ARG C . n C 3 95 LEU 95 94 94 LEU LEU C . n C 3 96 ALA 96 95 95 ALA ALA C . n C 3 97 ARG 97 96 96 ARG ARG C . n C 3 98 SER 98 97 97 SER SER C . n C 3 99 GLN 99 98 98 GLN GLN C . n C 3 100 ASP 100 99 99 ASP ASP C . n C 3 101 PRO 101 100 100 PRO PRO C . n C 3 102 ARG 102 101 101 ARG ARG C . n C 3 103 ILE 103 102 102 ILE ILE C . n C 3 104 GLN 104 103 103 GLN GLN C . n C 3 105 THR 105 104 104 THR THR C . n C 3 106 PHE 106 105 105 PHE PHE C . n C 3 107 VAL 107 106 106 VAL VAL C . n C 3 108 ASN 108 107 107 ASN ASN C . n C 3 109 GLY 109 108 108 GLY GLY C . n C 3 110 MSE 110 109 109 MSE MSE C . n C 3 111 ARG 111 110 110 ARG ARG C . n C 3 112 GLU 112 111 111 GLU GLU C . n C 3 113 GLN 113 112 112 GLN GLN C . n C 3 114 LEU 114 113 113 LEU LEU C . n C 3 115 LYS 115 114 114 LYS LYS C . n C 3 116 THR 116 115 ? ? ? C . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 HOH 1 67 2 HOH HOH A . D 4 HOH 2 68 3 HOH HOH A . D 4 HOH 3 69 5 HOH HOH A . D 4 HOH 4 70 6 HOH HOH A . D 4 HOH 5 71 10 HOH HOH A . D 4 HOH 6 72 14 HOH HOH A . D 4 HOH 7 73 17 HOH HOH A . D 4 HOH 8 74 18 HOH HOH A . D 4 HOH 9 75 19 HOH HOH A . D 4 HOH 10 76 22 HOH HOH A . D 4 HOH 11 77 24 HOH HOH A . D 4 HOH 12 78 26 HOH HOH A . D 4 HOH 13 79 27 HOH HOH A . D 4 HOH 14 80 29 HOH HOH A . D 4 HOH 15 81 35 HOH HOH A . D 4 HOH 16 82 36 HOH HOH A . D 4 HOH 17 83 37 HOH HOH A . D 4 HOH 18 84 39 HOH HOH A . D 4 HOH 19 85 53 HOH HOH A . D 4 HOH 20 86 59 HOH HOH A . D 4 HOH 21 87 68 HOH HOH A . D 4 HOH 22 88 69 HOH HOH A . D 4 HOH 23 89 71 HOH HOH A . D 4 HOH 24 90 79 HOH HOH A . D 4 HOH 25 91 84 HOH HOH A . D 4 HOH 26 92 88 HOH HOH A . D 4 HOH 27 93 90 HOH HOH A . D 4 HOH 28 94 93 HOH HOH A . D 4 HOH 29 95 96 HOH HOH A . D 4 HOH 30 96 98 HOH HOH A . D 4 HOH 31 97 106 HOH HOH A . D 4 HOH 32 98 109 HOH HOH A . D 4 HOH 33 99 110 HOH HOH A . D 4 HOH 34 100 111 HOH HOH A . D 4 HOH 35 101 112 HOH HOH A . D 4 HOH 36 102 116 HOH HOH A . D 4 HOH 37 103 117 HOH HOH A . D 4 HOH 38 104 118 HOH HOH A . D 4 HOH 39 105 119 HOH HOH A . D 4 HOH 40 106 122 HOH HOH A . D 4 HOH 41 107 126 HOH HOH A . D 4 HOH 42 108 129 HOH HOH A . D 4 HOH 43 109 132 HOH HOH A . D 4 HOH 44 110 140 HOH HOH A . D 4 HOH 45 111 141 HOH HOH A . D 4 HOH 46 112 142 HOH HOH A . D 4 HOH 47 113 149 HOH HOH A . D 4 HOH 48 114 152 HOH HOH A . D 4 HOH 49 115 153 HOH HOH A . D 4 HOH 50 116 158 HOH HOH A . D 4 HOH 51 117 159 HOH HOH A . D 4 HOH 52 118 160 HOH HOH A . D 4 HOH 53 119 163 HOH HOH A . D 4 HOH 54 120 165 HOH HOH A . D 4 HOH 55 121 171 HOH HOH A . D 4 HOH 56 122 175 HOH HOH A . D 4 HOH 57 123 177 HOH HOH A . D 4 HOH 58 124 181 HOH HOH A . D 4 HOH 59 125 183 HOH HOH A . D 4 HOH 60 126 188 HOH HOH A . D 4 HOH 61 127 190 HOH HOH A . D 4 HOH 62 128 193 HOH HOH A . D 4 HOH 63 129 196 HOH HOH A . D 4 HOH 64 130 197 HOH HOH A . D 4 HOH 65 131 199 HOH HOH A . D 4 HOH 66 132 201 HOH HOH A . D 4 HOH 67 133 204 HOH HOH A . D 4 HOH 68 134 208 HOH HOH A . D 4 HOH 69 135 209 HOH HOH A . D 4 HOH 70 136 212 HOH HOH A . D 4 HOH 71 137 220 HOH HOH A . D 4 HOH 72 138 221 HOH HOH A . D 4 HOH 73 139 223 HOH HOH A . D 4 HOH 74 140 224 HOH HOH A . D 4 HOH 75 141 226 HOH HOH A . D 4 HOH 76 142 227 HOH HOH A . E 4 HOH 1 88 13 HOH HOH B . E 4 HOH 2 89 28 HOH HOH B . E 4 HOH 3 90 34 HOH HOH B . E 4 HOH 4 91 41 HOH HOH B . E 4 HOH 5 92 47 HOH HOH B . E 4 HOH 6 93 48 HOH HOH B . E 4 HOH 7 94 49 HOH HOH B . E 4 HOH 8 95 50 HOH HOH B . E 4 HOH 9 96 57 HOH HOH B . E 4 HOH 10 97 61 HOH HOH B . E 4 HOH 11 98 65 HOH HOH B . E 4 HOH 12 99 66 HOH HOH B . E 4 HOH 13 100 85 HOH HOH B . E 4 HOH 14 101 86 HOH HOH B . E 4 HOH 15 102 87 HOH HOH B . E 4 HOH 16 103 97 HOH HOH B . E 4 HOH 17 104 127 HOH HOH B . E 4 HOH 18 105 133 HOH HOH B . E 4 HOH 19 106 136 HOH HOH B . E 4 HOH 20 107 146 HOH HOH B . E 4 HOH 21 108 150 HOH HOH B . E 4 HOH 22 109 151 HOH HOH B . E 4 HOH 23 110 155 HOH HOH B . E 4 HOH 24 111 156 HOH HOH B . E 4 HOH 25 112 162 HOH HOH B . E 4 HOH 26 113 167 HOH HOH B . E 4 HOH 27 114 172 HOH HOH B . E 4 HOH 28 115 174 HOH HOH B . E 4 HOH 29 116 178 HOH HOH B . E 4 HOH 30 117 182 HOH HOH B . E 4 HOH 31 118 184 HOH HOH B . E 4 HOH 32 119 198 HOH HOH B . E 4 HOH 33 120 205 HOH HOH B . E 4 HOH 34 121 207 HOH HOH B . E 4 HOH 35 122 219 HOH HOH B . E 4 HOH 36 226 216 HOH HOH B . F 4 HOH 1 116 1 HOH HOH C . F 4 HOH 2 117 4 HOH HOH C . F 4 HOH 3 118 7 HOH HOH C . F 4 HOH 4 119 8 HOH HOH C . F 4 HOH 5 120 9 HOH HOH C . F 4 HOH 6 121 11 HOH HOH C . F 4 HOH 7 122 12 HOH HOH C . F 4 HOH 8 123 15 HOH HOH C . F 4 HOH 9 124 16 HOH HOH C . F 4 HOH 10 125 20 HOH HOH C . F 4 HOH 11 126 21 HOH HOH C . F 4 HOH 12 127 23 HOH HOH C . F 4 HOH 13 128 25 HOH HOH C . F 4 HOH 14 129 30 HOH HOH C . F 4 HOH 15 130 31 HOH HOH C . F 4 HOH 16 131 32 HOH HOH C . F 4 HOH 17 132 33 HOH HOH C . F 4 HOH 18 133 38 HOH HOH C . F 4 HOH 19 134 40 HOH HOH C . F 4 HOH 20 135 42 HOH HOH C . F 4 HOH 21 136 43 HOH HOH C . F 4 HOH 22 137 44 HOH HOH C . F 4 HOH 23 138 45 HOH HOH C . F 4 HOH 24 139 46 HOH HOH C . F 4 HOH 25 140 51 HOH HOH C . F 4 HOH 26 141 52 HOH HOH C . F 4 HOH 27 142 54 HOH HOH C . F 4 HOH 28 143 55 HOH HOH C . F 4 HOH 29 144 56 HOH HOH C . F 4 HOH 30 145 58 HOH HOH C . F 4 HOH 31 146 60 HOH HOH C . F 4 HOH 32 147 62 HOH HOH C . F 4 HOH 33 148 63 HOH HOH C . F 4 HOH 34 149 64 HOH HOH C . F 4 HOH 35 150 67 HOH HOH C . F 4 HOH 36 151 70 HOH HOH C . F 4 HOH 37 152 72 HOH HOH C . F 4 HOH 38 153 73 HOH HOH C . F 4 HOH 39 154 74 HOH HOH C . F 4 HOH 40 155 75 HOH HOH C . F 4 HOH 41 156 76 HOH HOH C . F 4 HOH 42 157 77 HOH HOH C . F 4 HOH 43 158 78 HOH HOH C . F 4 HOH 44 159 80 HOH HOH C . F 4 HOH 45 160 81 HOH HOH C . F 4 HOH 46 161 82 HOH HOH C . F 4 HOH 47 162 83 HOH HOH C . F 4 HOH 48 163 89 HOH HOH C . F 4 HOH 49 164 91 HOH HOH C . F 4 HOH 50 165 92 HOH HOH C . F 4 HOH 51 166 94 HOH HOH C . F 4 HOH 52 167 95 HOH HOH C . F 4 HOH 53 168 99 HOH HOH C . F 4 HOH 54 169 100 HOH HOH C . F 4 HOH 55 170 101 HOH HOH C . F 4 HOH 56 171 102 HOH HOH C . F 4 HOH 57 172 103 HOH HOH C . F 4 HOH 58 173 104 HOH HOH C . F 4 HOH 59 174 105 HOH HOH C . F 4 HOH 60 175 107 HOH HOH C . F 4 HOH 61 176 108 HOH HOH C . F 4 HOH 62 177 113 HOH HOH C . F 4 HOH 63 178 114 HOH HOH C . F 4 HOH 64 179 115 HOH HOH C . F 4 HOH 65 180 120 HOH HOH C . F 4 HOH 66 181 121 HOH HOH C . F 4 HOH 67 182 123 HOH HOH C . F 4 HOH 68 183 124 HOH HOH C . F 4 HOH 69 184 125 HOH HOH C . F 4 HOH 70 185 128 HOH HOH C . F 4 HOH 71 186 130 HOH HOH C . F 4 HOH 72 187 131 HOH HOH C . F 4 HOH 73 188 134 HOH HOH C . F 4 HOH 74 189 135 HOH HOH C . F 4 HOH 75 190 137 HOH HOH C . F 4 HOH 76 191 138 HOH HOH C . F 4 HOH 77 192 139 HOH HOH C . F 4 HOH 78 193 143 HOH HOH C . F 4 HOH 79 194 144 HOH HOH C . F 4 HOH 80 195 145 HOH HOH C . F 4 HOH 81 196 147 HOH HOH C . F 4 HOH 82 197 148 HOH HOH C . F 4 HOH 83 198 154 HOH HOH C . F 4 HOH 84 199 157 HOH HOH C . F 4 HOH 85 200 161 HOH HOH C . F 4 HOH 86 201 164 HOH HOH C . F 4 HOH 87 202 166 HOH HOH C . F 4 HOH 88 203 168 HOH HOH C . F 4 HOH 89 204 169 HOH HOH C . F 4 HOH 90 205 170 HOH HOH C . F 4 HOH 91 206 173 HOH HOH C . F 4 HOH 92 207 176 HOH HOH C . F 4 HOH 93 208 179 HOH HOH C . F 4 HOH 94 209 180 HOH HOH C . F 4 HOH 95 210 185 HOH HOH C . F 4 HOH 96 211 186 HOH HOH C . F 4 HOH 97 212 187 HOH HOH C . F 4 HOH 98 213 189 HOH HOH C . F 4 HOH 99 214 191 HOH HOH C . F 4 HOH 100 215 192 HOH HOH C . F 4 HOH 101 216 194 HOH HOH C . F 4 HOH 102 217 195 HOH HOH C . F 4 HOH 103 218 200 HOH HOH C . F 4 HOH 104 219 202 HOH HOH C . F 4 HOH 105 220 203 HOH HOH C . F 4 HOH 106 221 206 HOH HOH C . F 4 HOH 107 222 210 HOH HOH C . F 4 HOH 108 223 211 HOH HOH C . F 4 HOH 109 224 213 HOH HOH C . F 4 HOH 110 225 214 HOH HOH C . F 4 HOH 111 226 215 HOH HOH C . F 4 HOH 112 227 217 HOH HOH C . F 4 HOH 113 228 218 HOH HOH C . F 4 HOH 114 229 222 HOH HOH C . F 4 HOH 115 230 225 HOH HOH C . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 18 A MSE 19 ? MET SELENOMETHIONINE 2 A MSE 22 A MSE 23 ? MET SELENOMETHIONINE 3 A MSE 31 A MSE 32 ? MET SELENOMETHIONINE 4 A MSE 32 A MSE 33 ? MET SELENOMETHIONINE 5 B MSE 74 B MSE 75 ? MET SELENOMETHIONINE 6 B MSE 78 B MSE 79 ? MET SELENOMETHIONINE 7 C MSE 51 C MSE 50 ? MET SELENOMETHIONINE 8 C MSE 110 C MSE 109 ? MET SELENOMETHIONINE # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 4460 ? 1 MORE -40.9 ? 1 'SSA (A^2)' 10400 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2008-03-04 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2017-10-18 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Refinement description' # _pdbx_audit_revision_category.ordinal 1 _pdbx_audit_revision_category.revision_ordinal 3 _pdbx_audit_revision_category.data_content_type 'Structure model' _pdbx_audit_revision_category.category software # _diffrn_reflns.diffrn_id 1 _diffrn_reflns.pdbx_d_res_high 1.800 _diffrn_reflns.pdbx_d_res_low 50.000 _diffrn_reflns.pdbx_number_obs 21105 _diffrn_reflns.pdbx_Rmerge_I_obs 0.101 _diffrn_reflns.pdbx_Rsym_value ? _diffrn_reflns.pdbx_chi_squared 1.10 _diffrn_reflns.av_sigmaI_over_netI 16.20 _diffrn_reflns.pdbx_redundancy 6.50 _diffrn_reflns.pdbx_percent_possible_obs 98.60 _diffrn_reflns.number 136238 _diffrn_reflns.pdbx_observed_criterion ? _diffrn_reflns.limit_h_max ? _diffrn_reflns.limit_h_min ? _diffrn_reflns.limit_k_max ? _diffrn_reflns.limit_k_min ? _diffrn_reflns.limit_l_max ? _diffrn_reflns.limit_l_min ? # loop_ _pdbx_diffrn_reflns_shell.diffrn_id _pdbx_diffrn_reflns_shell.d_res_high _pdbx_diffrn_reflns_shell.d_res_low _pdbx_diffrn_reflns_shell.number_obs _pdbx_diffrn_reflns_shell.rejects _pdbx_diffrn_reflns_shell.Rmerge_I_obs _pdbx_diffrn_reflns_shell.Rsym_value _pdbx_diffrn_reflns_shell.chi_squared _pdbx_diffrn_reflns_shell.redundancy _pdbx_diffrn_reflns_shell.percent_possible_obs 1 3.88 50.00 ? ? 0.080 ? 1.073 6.40 99.20 1 3.08 3.88 ? ? 0.085 ? 1.066 6.50 96.50 1 2.69 3.08 ? ? 0.096 ? 1.079 7.00 100.00 1 2.44 2.69 ? ? 0.116 ? 1.087 7.10 100.00 1 2.27 2.44 ? ? 0.130 ? 1.183 6.90 99.90 1 2.13 2.27 ? ? 0.150 ? 1.092 5.90 95.50 1 2.03 2.13 ? ? 0.188 ? 1.010 7.10 100.00 1 1.94 2.03 ? ? 0.260 ? 1.142 6.90 100.00 1 1.86 1.94 ? ? 0.364 ? 1.125 6.00 99.90 1 1.80 1.86 ? ? 0.369 ? 1.159 4.60 95.10 # _pdbx_phasing_MAD_set.id fobs_FRIED _pdbx_phasing_MAD_set.d_res_high 1.790 _pdbx_phasing_MAD_set.d_res_low 37.150 _pdbx_phasing_MAD_set.R_cullis_centric 10.000 _pdbx_phasing_MAD_set.R_cullis_acentric 0.713 _pdbx_phasing_MAD_set.R_cullis 0.748 _pdbx_phasing_MAD_set.R_kraut_centric 0.028 _pdbx_phasing_MAD_set.R_kraut_acentric 0.053 _pdbx_phasing_MAD_set.R_kraut 0.051 _pdbx_phasing_MAD_set.loc_centric 12.109 _pdbx_phasing_MAD_set.loc_acentric 10.958 _pdbx_phasing_MAD_set.loc 11.036 _pdbx_phasing_MAD_set.power_centric 1.497 _pdbx_phasing_MAD_set.power_acentric 1.293 _pdbx_phasing_MAD_set.power 1.313 _pdbx_phasing_MAD_set.fom_centric 0.000 _pdbx_phasing_MAD_set.fom_acentric 0.295 _pdbx_phasing_MAD_set.fom 0.273 # loop_ _pdbx_phasing_MAD_set_shell.id _pdbx_phasing_MAD_set_shell.d_res_high _pdbx_phasing_MAD_set_shell.d_res_low _pdbx_phasing_MAD_set_shell.R_cullis_centric _pdbx_phasing_MAD_set_shell.R_cullis_acentric _pdbx_phasing_MAD_set_shell.R_cullis _pdbx_phasing_MAD_set_shell.R_kraut_centric _pdbx_phasing_MAD_set_shell.R_kraut_acentric _pdbx_phasing_MAD_set_shell.R_kraut _pdbx_phasing_MAD_set_shell.loc_centric _pdbx_phasing_MAD_set_shell.loc_acentric _pdbx_phasing_MAD_set_shell.loc _pdbx_phasing_MAD_set_shell.power_centric _pdbx_phasing_MAD_set_shell.power_acentric _pdbx_phasing_MAD_set_shell.power _pdbx_phasing_MAD_set_shell.fom_centric _pdbx_phasing_MAD_set_shell.fom_acentric _pdbx_phasing_MAD_set_shell.fom fobs_FRIED 3.580 37.150 10.000 0.656 0.713 0.024 0.036 0.034 17.113 16.990 16.963 1.682 1.486 1.518 0.000 0.353 0.299 fobs_FRIED 2.840 3.580 10.000 0.683 0.715 0.028 0.040 0.039 12.585 12.537 12.531 1.468 1.488 1.486 0.000 0.363 0.331 fobs_FRIED 2.480 2.840 10.000 0.664 0.689 0.031 0.048 0.046 10.199 10.175 10.173 1.579 1.468 1.476 0.000 0.375 0.348 fobs_FRIED 2.260 2.480 10.000 0.700 0.724 0.032 0.053 0.052 9.401 9.375 9.372 1.407 1.346 1.350 0.000 0.345 0.323 fobs_FRIED 2.090 2.260 10.000 0.777 0.801 0.033 0.062 0.060 9.497 9.482 9.481 1.105 1.097 1.098 0.000 0.280 0.263 fobs_FRIED 1.970 2.090 10.000 0.811 0.834 0.035 0.073 0.072 9.282 9.251 9.248 0.986 0.987 0.987 0.000 0.252 0.239 fobs_FRIED 1.870 1.970 10.000 0.839 0.863 0.048 0.106 0.104 10.134 10.107 10.105 0.873 0.784 0.789 0.000 0.191 0.181 fobs_FRIED 1.790 1.870 10.000 0.843 0.864 0.047 0.126 0.122 10.207 10.182 10.180 0.736 0.710 0.711 0.000 0.151 0.144 # loop_ _pdbx_phasing_MAD_set_site.id _pdbx_phasing_MAD_set_site.atom_type_symbol _pdbx_phasing_MAD_set_site.Cartn_x _pdbx_phasing_MAD_set_site.Cartn_y _pdbx_phasing_MAD_set_site.Cartn_z _pdbx_phasing_MAD_set_site.occupancy _pdbx_phasing_MAD_set_site.b_iso 1 1 -13.709 -24.446 -1.086 1.00 18.65 2 2 -3.391 -19.336 -5.497 1.00 19.49 3 3 -4.718 -0.168 -13.206 1.00 13.72 4 4 -6.449 -26.777 -2.585 1.00 21.84 5 5 -9.978 -34.925 -0.100 1.00 26.35 6 6 -36.568 -41.098 -16.740 1.00 31.18 7 7 -17.506 -11.229 -0.640 1.00 59.65 8 8 -16.071 -10.447 -5.563 1.00 39.21 # loop_ _pdbx_phasing_MAD_shell.d_res_high _pdbx_phasing_MAD_shell.d_res_low _pdbx_phasing_MAD_shell.reflns _pdbx_phasing_MAD_shell.fom_centric _pdbx_phasing_MAD_shell.fom_acentric _pdbx_phasing_MAD_shell.fom 3.58 37.15 4844 0.0000 0.3566 0.3052 2.84 3.58 5016 0.0000 0.3627 0.3309 2.48 2.84 5059 0.0000 0.3744 0.3479 2.26 2.48 4779 0.0000 0.3361 0.3150 2.09 2.26 4726 0.0000 0.2683 0.2533 1.97 2.09 4794 0.0000 0.2441 0.2315 1.87 1.97 4593 0.0000 0.1789 0.1699 1.79 1.87 3720 0.0000 0.1370 0.1309 # _pdbx_phasing_dm.entry_id 2P58 _pdbx_phasing_dm.mask_type RMS _pdbx_phasing_dm.method FLIP _pdbx_phasing_dm.delta_phi_final 38.290 _pdbx_phasing_dm.delta_phi_initial 55.480 _pdbx_phasing_dm.fom 0.806 _pdbx_phasing_dm.reflns 39726 # loop_ _pdbx_phasing_dm_shell.d_res_high _pdbx_phasing_dm_shell.d_res_low _pdbx_phasing_dm_shell.delta_phi_final _pdbx_phasing_dm_shell.delta_phi_initial _pdbx_phasing_dm_shell.fom_acentric _pdbx_phasing_dm_shell.fom_centric _pdbx_phasing_dm_shell.fom _pdbx_phasing_dm_shell.reflns_acentric _pdbx_phasing_dm_shell.reflns_centric _pdbx_phasing_dm_shell.reflns 4.800 50.000 17.204 ? ? ? 0.728 ? ? 2095 3.810 4.800 19.730 ? ? ? 0.886 ? ? 2097 3.330 3.810 27.565 ? ? ? 0.906 ? ? 2087 3.030 3.330 27.689 ? ? ? 0.840 ? ? 2089 2.810 3.030 28.608 ? ? ? 0.836 ? ? 2104 2.640 2.810 29.514 ? ? ? 0.839 ? ? 2071 2.510 2.640 28.451 ? ? ? 0.829 ? ? 2099 2.400 2.510 31.151 ? ? ? 0.823 ? ? 2092 2.310 2.400 36.078 ? ? ? 0.818 ? ? 2094 2.230 2.310 39.850 ? ? ? 0.854 ? ? 2059 2.160 2.230 42.849 ? ? ? 0.799 ? ? 2138 2.100 2.160 40.756 ? ? ? 0.787 ? ? 2070 2.040 2.100 44.213 ? ? ? 0.780 ? ? 2107 1.990 2.040 46.864 ? ? ? 0.753 ? ? 2080 1.950 1.990 49.883 ? ? ? 0.738 ? ? 2082 1.910 1.950 53.997 ? ? ? 0.707 ? ? 2107 1.870 1.910 55.357 ? ? ? 0.776 ? ? 2057 1.830 1.870 54.948 ? ? ? 0.764 ? ? 2076 1.800 1.830 52.909 ? ? ? 0.855 ? ? 2122 # _phasing.method SAD # _phasing_MAD.entry_id 2P58 _phasing_MAD.pdbx_d_res_high 1.790 _phasing_MAD.pdbx_d_res_low 37.150 _phasing_MAD.pdbx_reflns 37531 _phasing_MAD.pdbx_fom_centric 0.000 _phasing_MAD.pdbx_fom_acentric 0.287 _phasing_MAD.pdbx_fom 0.266 # loop_ _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id _software.pdbx_ordinal DENZO . ? package 'Zbyszek Otwinowski' zbyszek@mix.swmed.edu 'data reduction' http://www.lnls.br/infra/linhasluz/denzo-hkl.htm ? ? 1 SCALEPACK . ? package 'Zbyszek Otwinowski' zbyszek@mix.swmed.edu 'data scaling' http://www.lnls.br/infra/linhasluz/denzo-hkl.htm ? ? 2 CNS . ? package 'Axel T. Brunger' axel.brunger@yale.edu phasing http://cns.csb.yale.edu/v1.1/ Fortran_77 ? 3 CNS . ? package 'Axel T. Brunger' axel.brunger@yale.edu refinement http://cns.csb.yale.edu/v1.1/ Fortran_77 ? 4 PDB_EXTRACT 2.000 'April. 3, 2006' package PDB sw-help@rcsb.rutgers.edu 'data extraction' http://pdb.rutgers.edu/software/ C++ ? 5 MAR345 CCD ? ? ? ? 'data collection' ? ? ? 6 HKL-2000 . ? ? ? ? 'data reduction' ? ? ? 7 HKL-2000 . ? ? ? ? 'data scaling' ? ? ? 8 # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 O C ALA 66 ? ? O C HOH 160 ? ? 2.15 2 1 OE1 A GLU 47 ? ? O A HOH 134 ? ? 2.18 # _pdbx_validate_torsion.id 1 _pdbx_validate_torsion.PDB_model_num 1 _pdbx_validate_torsion.auth_comp_id TYR _pdbx_validate_torsion.auth_asym_id C _pdbx_validate_torsion.auth_seq_id 21 _pdbx_validate_torsion.PDB_ins_code ? _pdbx_validate_torsion.label_alt_id ? _pdbx_validate_torsion.phi -113.59 _pdbx_validate_torsion.psi 68.25 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A THR 2 ? A THR 1 2 1 Y 1 A GLN 3 ? A GLN 2 3 1 Y 1 A LEU 4 ? A LEU 3 4 1 Y 1 A GLU 5 ? A GLU 4 5 1 Y 1 A GLU 6 ? A GLU 5 6 1 Y 1 A GLN 7 ? A GLN 6 7 1 Y 1 A LEU 8 ? A LEU 7 8 1 Y 1 A HIS 9 ? A HIS 8 9 1 Y 1 A ASP 64 ? A ASP 63 10 1 Y 1 A LEU 65 ? A LEU 64 11 1 Y 1 A LYS 66 ? A LYS 65 12 1 Y 1 B SER 2 ? B SER 1 13 1 Y 1 B ASN 3 ? B ASN 2 14 1 Y 1 B PHE 4 ? B PHE 3 15 1 Y 1 B SER 5 ? B SER 4 16 1 Y 1 B GLY 6 ? B GLY 5 17 1 Y 1 B PHE 7 ? B PHE 6 18 1 Y 1 B THR 8 ? B THR 7 19 1 Y 1 B LYS 9 ? B LYS 8 20 1 Y 1 B GLY 10 ? B GLY 9 21 1 Y 1 B THR 11 ? B THR 10 22 1 Y 1 B ASP 12 ? B ASP 11 23 1 Y 1 B ILE 13 ? B ILE 12 24 1 Y 1 B ALA 14 ? B ALA 13 25 1 Y 1 B ASP 15 ? B ASP 14 26 1 Y 1 B LEU 16 ? B LEU 15 27 1 Y 1 B ASP 17 ? B ASP 16 28 1 Y 1 B ALA 18 ? B ALA 17 29 1 Y 1 B VAL 19 ? B VAL 18 30 1 Y 1 B ALA 20 ? B ALA 19 31 1 Y 1 B GLN 21 ? B GLN 20 32 1 Y 1 B THR 22 ? B THR 21 33 1 Y 1 B LEU 23 ? B LEU 22 34 1 Y 1 B LYS 24 ? B LYS 23 35 1 Y 1 B LYS 25 ? B LYS 24 36 1 Y 1 B PRO 26 ? B PRO 25 37 1 Y 1 B ALA 27 ? B ALA 26 38 1 Y 1 B ASP 28 ? B ASP 27 39 1 Y 1 B ASP 29 ? B ASP 28 40 1 Y 1 B ALA 30 ? B ALA 29 41 1 Y 1 B ASN 31 ? B ASN 30 42 1 Y 1 B LYS 32 ? B LYS 31 43 1 Y 1 B ALA 33 ? B ALA 32 44 1 Y 1 B VAL 34 ? B VAL 33 45 1 Y 1 B ASN 35 ? B ASN 34 46 1 Y 1 B ASP 36 ? B ASP 35 47 1 Y 1 B SER 37 ? B SER 36 48 1 Y 1 B ILE 38 ? B ILE 37 49 1 Y 1 B ALA 39 ? B ALA 38 50 1 Y 1 B ALA 40 ? B ALA 39 51 1 Y 1 B LEU 41 ? B LEU 40 52 1 Y 1 B LYS 42 ? B LYS 41 53 1 Y 1 B ASP 43 ? B ASP 42 54 1 Y 1 B LYS 44 ? B LYS 43 55 1 Y 1 B PRO 45 ? B PRO 44 56 1 Y 1 B ASP 46 ? B ASP 45 57 1 Y 1 B ASN 47 ? B ASN 46 58 1 Y 1 B PRO 48 ? B PRO 47 59 1 Y 1 B ALA 49 ? B ALA 48 60 1 Y 1 C SER 0 ? C SER 1 61 1 Y 1 C MSE 1 ? C MSE 2 62 1 Y 1 C LYS 2 ? C LYS 3 63 1 Y 1 C THR 115 ? C THR 116 # _pdbx_entity_nonpoly.entity_id 4 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH #