data_2P8N # _entry.id 2P8N # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.377 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2P8N pdb_00002p8n 10.2210/pdb2p8n/pdb RCSB RCSB042104 ? ? WWPDB D_1000042104 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 1ZB0 RTA-N-methylurea unspecified PDB 1ZAM RTA-urea unspecified PDB 1ZB2 RTA-acetamide unspecified # _pdbx_database_status.entry_id 2P8N _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.recvd_initial_deposition_date 2007-03-22 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.SG_entry N _pdbx_database_status.status_code_mr ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Carra, J.H.' 1 'Mchugh, C.A.' 2 'Mulligan, S.' 3 'Machiesky, L.M.' 4 'Millard, C.B.' 5 # _citation.id primary _citation.title 'Fragment-based identification of determinants of conformational and spectroscopic change at the ricin active site' _citation.journal_abbrev 'BMC Struct.Biol.' _citation.journal_volume 7 _citation.page_first 72 _citation.page_last 72 _citation.year 2007 _citation.journal_id_ASTM ? _citation.country UK _citation.journal_id_ISSN 1472-6807 _citation.journal_id_CSD ? _citation.book_publisher ? _citation.pdbx_database_id_PubMed 17986339 _citation.pdbx_database_id_DOI 10.1186/1472-6807-7-72 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Carra, J.H.' 1 ? primary 'McHugh, C.A.' 2 ? primary 'Mulligan, S.' 3 ? primary 'Machiesky, L.M.' 4 ? primary 'Soares, A.S.' 5 ? primary 'Millard, C.B.' 6 ? # _cell.entry_id 2P8N _cell.length_a 68.162 _cell.length_b 68.162 _cell.length_c 141.195 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 2P8N _symmetry.space_group_name_H-M 'P 41 21 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.Int_Tables_number 92 _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Ricin A chain' 30067.953 1 3.2.2.22 ? 'residues 36-302' ? 2 non-polymer syn 'SULFATE ION' 96.063 3 ? ? ? ? 3 non-polymer syn ADENINE 135.127 1 ? ? ? ? 4 water nat water 18.015 135 ? ? ? ? # _entity_name_sys.entity_id 1 _entity_name_sys.name E.C.3.2.2.22 # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MIFPKQYPIINFTTAGATVQSYTNFIRAVRGRLTTGADVRHEIPVLPNRVGLPINQRFILVELSNHAELSVTLALDVTNA YVVGYRAGNSAYFFHPDNQEDAEAITHLFTDVQNRYTFAFGGNYDRLEQLAGNLRENIELGNGPLEEAISALYYYSTGGT QLPTLARSFIICIQMISEAARFQYIEGEMRTRIRYNRRSAPDPSVITLENSWGRLSTAIQESNQGAFASPIQLQRRNGSK FSVYDVSILIPIIALMVYRCAPPPSSQF ; _entity_poly.pdbx_seq_one_letter_code_can ;MIFPKQYPIINFTTAGATVQSYTNFIRAVRGRLTTGADVRHEIPVLPNRVGLPINQRFILVELSNHAELSVTLALDVTNA YVVGYRAGNSAYFFHPDNQEDAEAITHLFTDVQNRYTFAFGGNYDRLEQLAGNLRENIELGNGPLEEAISALYYYSTGGT QLPTLARSFIICIQMISEAARFQYIEGEMRTRIRYNRRSAPDPSVITLENSWGRLSTAIQESNQGAFASPIQLQRRNGSK FSVYDVSILIPIIALMVYRCAPPPSSQF ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 ILE n 1 3 PHE n 1 4 PRO n 1 5 LYS n 1 6 GLN n 1 7 TYR n 1 8 PRO n 1 9 ILE n 1 10 ILE n 1 11 ASN n 1 12 PHE n 1 13 THR n 1 14 THR n 1 15 ALA n 1 16 GLY n 1 17 ALA n 1 18 THR n 1 19 VAL n 1 20 GLN n 1 21 SER n 1 22 TYR n 1 23 THR n 1 24 ASN n 1 25 PHE n 1 26 ILE n 1 27 ARG n 1 28 ALA n 1 29 VAL n 1 30 ARG n 1 31 GLY n 1 32 ARG n 1 33 LEU n 1 34 THR n 1 35 THR n 1 36 GLY n 1 37 ALA n 1 38 ASP n 1 39 VAL n 1 40 ARG n 1 41 HIS n 1 42 GLU n 1 43 ILE n 1 44 PRO n 1 45 VAL n 1 46 LEU n 1 47 PRO n 1 48 ASN n 1 49 ARG n 1 50 VAL n 1 51 GLY n 1 52 LEU n 1 53 PRO n 1 54 ILE n 1 55 ASN n 1 56 GLN n 1 57 ARG n 1 58 PHE n 1 59 ILE n 1 60 LEU n 1 61 VAL n 1 62 GLU n 1 63 LEU n 1 64 SER n 1 65 ASN n 1 66 HIS n 1 67 ALA n 1 68 GLU n 1 69 LEU n 1 70 SER n 1 71 VAL n 1 72 THR n 1 73 LEU n 1 74 ALA n 1 75 LEU n 1 76 ASP n 1 77 VAL n 1 78 THR n 1 79 ASN n 1 80 ALA n 1 81 TYR n 1 82 VAL n 1 83 VAL n 1 84 GLY n 1 85 TYR n 1 86 ARG n 1 87 ALA n 1 88 GLY n 1 89 ASN n 1 90 SER n 1 91 ALA n 1 92 TYR n 1 93 PHE n 1 94 PHE n 1 95 HIS n 1 96 PRO n 1 97 ASP n 1 98 ASN n 1 99 GLN n 1 100 GLU n 1 101 ASP n 1 102 ALA n 1 103 GLU n 1 104 ALA n 1 105 ILE n 1 106 THR n 1 107 HIS n 1 108 LEU n 1 109 PHE n 1 110 THR n 1 111 ASP n 1 112 VAL n 1 113 GLN n 1 114 ASN n 1 115 ARG n 1 116 TYR n 1 117 THR n 1 118 PHE n 1 119 ALA n 1 120 PHE n 1 121 GLY n 1 122 GLY n 1 123 ASN n 1 124 TYR n 1 125 ASP n 1 126 ARG n 1 127 LEU n 1 128 GLU n 1 129 GLN n 1 130 LEU n 1 131 ALA n 1 132 GLY n 1 133 ASN n 1 134 LEU n 1 135 ARG n 1 136 GLU n 1 137 ASN n 1 138 ILE n 1 139 GLU n 1 140 LEU n 1 141 GLY n 1 142 ASN n 1 143 GLY n 1 144 PRO n 1 145 LEU n 1 146 GLU n 1 147 GLU n 1 148 ALA n 1 149 ILE n 1 150 SER n 1 151 ALA n 1 152 LEU n 1 153 TYR n 1 154 TYR n 1 155 TYR n 1 156 SER n 1 157 THR n 1 158 GLY n 1 159 GLY n 1 160 THR n 1 161 GLN n 1 162 LEU n 1 163 PRO n 1 164 THR n 1 165 LEU n 1 166 ALA n 1 167 ARG n 1 168 SER n 1 169 PHE n 1 170 ILE n 1 171 ILE n 1 172 CYS n 1 173 ILE n 1 174 GLN n 1 175 MET n 1 176 ILE n 1 177 SER n 1 178 GLU n 1 179 ALA n 1 180 ALA n 1 181 ARG n 1 182 PHE n 1 183 GLN n 1 184 TYR n 1 185 ILE n 1 186 GLU n 1 187 GLY n 1 188 GLU n 1 189 MET n 1 190 ARG n 1 191 THR n 1 192 ARG n 1 193 ILE n 1 194 ARG n 1 195 TYR n 1 196 ASN n 1 197 ARG n 1 198 ARG n 1 199 SER n 1 200 ALA n 1 201 PRO n 1 202 ASP n 1 203 PRO n 1 204 SER n 1 205 VAL n 1 206 ILE n 1 207 THR n 1 208 LEU n 1 209 GLU n 1 210 ASN n 1 211 SER n 1 212 TRP n 1 213 GLY n 1 214 ARG n 1 215 LEU n 1 216 SER n 1 217 THR n 1 218 ALA n 1 219 ILE n 1 220 GLN n 1 221 GLU n 1 222 SER n 1 223 ASN n 1 224 GLN n 1 225 GLY n 1 226 ALA n 1 227 PHE n 1 228 ALA n 1 229 SER n 1 230 PRO n 1 231 ILE n 1 232 GLN n 1 233 LEU n 1 234 GLN n 1 235 ARG n 1 236 ARG n 1 237 ASN n 1 238 GLY n 1 239 SER n 1 240 LYS n 1 241 PHE n 1 242 SER n 1 243 VAL n 1 244 TYR n 1 245 ASP n 1 246 VAL n 1 247 SER n 1 248 ILE n 1 249 LEU n 1 250 ILE n 1 251 PRO n 1 252 ILE n 1 253 ILE n 1 254 ALA n 1 255 LEU n 1 256 MET n 1 257 VAL n 1 258 TYR n 1 259 ARG n 1 260 CYS n 1 261 ALA n 1 262 PRO n 1 263 PRO n 1 264 PRO n 1 265 SER n 1 266 SER n 1 267 GLN n 1 268 PHE n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name 'castor bean' _entity_src_gen.gene_src_genus Ricinus _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Ricinus communis' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 3988 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.entity_id 1 _struct_ref.db_name UNP _struct_ref.db_code RICI_RICCO _struct_ref.pdbx_db_accession P02879 _struct_ref.pdbx_align_begin 36 _struct_ref.pdbx_seq_one_letter_code ;IFPKQYPIINFTTAGATVQSYTNFIRAVRGRLTTGADVRHEIPVLPNRVGLPINQRFILVELSNHAELSVTLALDVTNAY VVGYRAGNSAYFFHPDNQEDAEAITHLFTDVQNRYTFAFGGNYDRLEQLAGNLRENIELGNGPLEEAISALYYYSTGGTQ LPTLARSFIICIQMISEAARFQYIEGEMRTRIRYNRRSAPDPSVITLENSWGRLSTAIQESNQGAFASPIQLQRRNGSKF SVYDVSILIPIIALMVYRCAPPPSSQF ; _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 2P8N _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 2 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 268 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P02879 _struct_ref_seq.db_align_beg 36 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 302 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 267 # _struct_ref_seq_dif.align_id 1 _struct_ref_seq_dif.pdbx_pdb_id_code 2P8N _struct_ref_seq_dif.mon_id MET _struct_ref_seq_dif.pdbx_pdb_strand_id A _struct_ref_seq_dif.seq_num 1 _struct_ref_seq_dif.pdbx_pdb_ins_code ? _struct_ref_seq_dif.pdbx_seq_db_name UNP _struct_ref_seq_dif.pdbx_seq_db_accession_code P02879 _struct_ref_seq_dif.db_mon_id ? _struct_ref_seq_dif.pdbx_seq_db_seq_num ? _struct_ref_seq_dif.details 'initiating methionine' _struct_ref_seq_dif.pdbx_auth_seq_num 0 _struct_ref_seq_dif.pdbx_ordinal 1 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ADE non-polymer . ADENINE ? 'C5 H5 N5' 135.127 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 SO4 non-polymer . 'SULFATE ION' ? 'O4 S -2' 96.063 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 2P8N _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_Matthews 2.70 _exptl_crystal.density_percent_sol 53.90 _exptl_crystal.density_meas ? _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 295 _exptl_crystal_grow.pH 4.20 _exptl_crystal_grow.pdbx_details '20% AMMONIUM SULFATE, 50 MIMILLIMOLAR SODIUM ACETATE, PH 4.2, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 295K, pH 4.20' _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100.0 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type ADSC _diffrn_detector.pdbx_collection_date 2005-05-10 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # loop_ _diffrn_radiation_wavelength.id _diffrn_radiation_wavelength.wavelength _diffrn_radiation_wavelength.wt 1 1.10 1.0 2 1.1 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'NSLS BEAMLINE X12C' _diffrn_source.pdbx_synchrotron_site NSLS _diffrn_source.pdbx_synchrotron_beamline X12C _diffrn_source.pdbx_wavelength 1.10 _diffrn_source.pdbx_wavelength_list 1.1 # _reflns.entry_id 2P8N _reflns.observed_criterion_sigma_I 0.000 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 33.67 _reflns.d_resolution_high 1.94 _reflns.number_obs 26260 _reflns.number_all ? _reflns.percent_possible_obs 99.3 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value 0.128 _reflns.pdbx_netI_over_sigmaI 17.8 _reflns.B_iso_Wilson_estimate 10.4 _reflns.pdbx_redundancy 12.4 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 1.94 _reflns_shell.d_res_low 2.06 _reflns_shell.percent_possible_all 99.3 _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value 0.339 _reflns_shell.meanI_over_sigI_obs 8.88 _reflns_shell.pdbx_redundancy 6.8 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 2P8N _refine.ls_number_reflns_obs 25260 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.000 _refine.pdbx_data_cutoff_high_absF 1765562.95 _refine.pdbx_data_cutoff_low_absF 0.0000 _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 33.97 _refine.ls_d_res_high 1.94 _refine.ls_percent_reflns_obs 99.3 _refine.ls_R_factor_obs 0.2651 _refine.ls_R_factor_all 0.2651 _refine.ls_R_factor_R_work 0.265 _refine.ls_R_factor_R_free 0.301 _refine.ls_R_factor_R_free_error 0.008 _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.2 _refine.ls_number_reflns_R_free 1302 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean 20.3 _refine.aniso_B[1][1] 2.20000 _refine.aniso_B[2][2] 2.20000 _refine.aniso_B[3][3] -4.3900 _refine.aniso_B[1][2] 0.00000 _refine.aniso_B[1][3] 0.00000 _refine.aniso_B[2][3] 0.00000 _refine.solvent_model_details 'FLAT MODEL' _refine.solvent_model_param_ksol 0.341598 _refine.solvent_model_param_bsol 33.3086 _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ? _refine.pdbx_starting_model 'PDB ENTRY 1IFT' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model RESTRAINED _refine.pdbx_stereochemistry_target_values 'Engh & Huber' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 2P8N _refine_analyze.Luzzati_coordinate_error_obs 0.28 _refine_analyze.Luzzati_sigma_a_obs 0.13 _refine_analyze.Luzzati_d_res_low_obs 5.00 _refine_analyze.Luzzati_coordinate_error_free 0.35 _refine_analyze.Luzzati_sigma_a_free 0.12 _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.pdbx_Luzzati_d_res_high_obs ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2037 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 25 _refine_hist.number_atoms_solvent 135 _refine_hist.number_atoms_total 2197 _refine_hist.d_res_high 1.94 _refine_hist.d_res_low 33.97 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function c_bond_d 0.011 ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg 1.2 ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d 23.0 ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d 0.78 ? ? ? 'X-RAY DIFFRACTION' ? c_mcbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? c_mcangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? c_scbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? c_scangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 6 _refine_ls_shell.d_res_high 1.94 _refine_ls_shell.d_res_low 2.06 _refine_ls_shell.number_reflns_R_work 3849 _refine_ls_shell.R_factor_R_work 0.27 _refine_ls_shell.percent_reflns_obs 98.6 _refine_ls_shell.R_factor_R_free 0.304 _refine_ls_shell.R_factor_R_free_error 0.020 _refine_ls_shell.percent_reflns_R_free 5.8 _refine_ls_shell.number_reflns_R_free 235 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # loop_ _pdbx_xplor_file.serial_no _pdbx_xplor_file.param_file _pdbx_xplor_file.topol_file _pdbx_xplor_file.pdbx_refine_id 1 protein_rep.param protein.top 'X-RAY DIFFRACTION' 2 ane.par ane.top 'X-RAY DIFFRACTION' 3 water_rep.param water.top 'X-RAY DIFFRACTION' 4 ion.param ion.top 'X-RAY DIFFRACTION' # _struct.entry_id 2P8N _struct.title 'Ricin a-chain (recombinant) complex with adenine' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2P8N _struct_keywords.pdbx_keywords HYDROLASE _struct_keywords.text 'RICIN; RICINUS COMMUNIS; N-GLYCOSIDASE; TOXIN, HYDROLASE' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 2 ? D N N 2 ? E N N 3 ? F N N 4 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 THR A 18 ? THR A 34 ? THR A 17 THR A 33 1 ? 17 HELX_P HELX_P2 2 PRO A 53 ? GLN A 56 ? PRO A 52 GLN A 55 5 ? 4 HELX_P HELX_P3 3 ASN A 98 ? ILE A 105 ? ASN A 97 ILE A 104 1 ? 8 HELX_P HELX_P4 4 THR A 106 ? LEU A 108 ? THR A 105 LEU A 107 5 ? 3 HELX_P HELX_P5 5 ASN A 123 ? GLY A 132 ? ASN A 122 GLY A 131 1 ? 10 HELX_P HELX_P6 6 LEU A 134 ? ILE A 138 ? LEU A 133 ILE A 137 5 ? 5 HELX_P HELX_P7 7 GLY A 141 ? TYR A 154 ? GLY A 140 TYR A 153 1 ? 14 HELX_P HELX_P8 8 GLN A 161 ? PHE A 182 ? GLN A 160 PHE A 181 1 ? 22 HELX_P HELX_P9 9 PHE A 182 ? TYR A 195 ? PHE A 181 TYR A 194 1 ? 14 HELX_P HELX_P10 10 ASP A 202 ? SER A 222 ? ASP A 201 SER A 221 1 ? 21 HELX_P HELX_P11 11 SER A 247 ? ILE A 250 ? SER A 246 ILE A 249 5 ? 4 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 6 ? B ? 2 ? C ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel A 5 6 ? parallel B 1 2 ? anti-parallel C 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 ILE A 9 ? THR A 13 ? ILE A 8 THR A 12 A 2 PHE A 58 ? SER A 64 ? PHE A 57 SER A 63 A 3 SER A 70 ? ASP A 76 ? SER A 69 ASP A 75 A 4 VAL A 82 ? ALA A 87 ? VAL A 81 ALA A 86 A 5 SER A 90 ? PHE A 93 ? SER A 89 PHE A 92 A 6 ASN A 114 ? THR A 117 ? ASN A 113 THR A 116 B 1 VAL A 39 ? ARG A 40 ? VAL A 38 ARG A 39 B 2 ILE A 43 ? PRO A 44 ? ILE A 42 PRO A 43 C 1 ALA A 226 ? GLN A 234 ? ALA A 225 GLN A 233 C 2 LYS A 240 ? ASP A 245 ? LYS A 239 ASP A 244 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N ILE A 10 ? N ILE A 9 O LEU A 60 ? O LEU A 59 A 2 3 N VAL A 61 ? N VAL A 60 O LEU A 73 ? O LEU A 72 A 3 4 N ALA A 74 ? N ALA A 73 O VAL A 83 ? O VAL A 82 A 4 5 N ALA A 87 ? N ALA A 86 O SER A 90 ? O SER A 89 A 5 6 N ALA A 91 ? N ALA A 90 O ASN A 114 ? O ASN A 113 B 1 2 N ARG A 40 ? N ARG A 39 O ILE A 43 ? O ILE A 42 C 1 2 N LEU A 233 ? N LEU A 232 O PHE A 241 ? O PHE A 240 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A SO4 268 ? 4 'BINDING SITE FOR RESIDUE SO4 A 268' AC2 Software A SO4 269 ? 5 'BINDING SITE FOR RESIDUE SO4 A 269' AC3 Software A SO4 270 ? 4 'BINDING SITE FOR RESIDUE SO4 A 270' AC4 Software A ADE 271 ? 7 'BINDING SITE FOR RESIDUE ADE A 271' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 4 PHE A 120 ? PHE A 119 . ? 1_555 ? 2 AC1 4 GLY A 121 ? GLY A 120 . ? 1_555 ? 3 AC1 4 ASN A 123 ? ASN A 122 . ? 1_555 ? 4 AC1 4 ARG A 126 ? ARG A 125 . ? 1_555 ? 5 AC2 5 THR A 18 ? THR A 17 . ? 7_555 ? 6 AC2 5 GLN A 20 ? GLN A 19 . ? 7_555 ? 7 AC2 5 HIS A 66 ? HIS A 65 . ? 1_555 ? 8 AC2 5 HOH F . ? HOH A 282 . ? 1_555 ? 9 AC2 5 HOH F . ? HOH A 384 . ? 7_555 ? 10 AC3 4 ASN A 123 ? ASN A 122 . ? 1_555 ? 11 AC3 4 TYR A 124 ? TYR A 123 . ? 1_555 ? 12 AC3 4 ASP A 125 ? ASP A 124 . ? 1_555 ? 13 AC3 4 ADE E . ? ADE A 271 . ? 1_555 ? 14 AC4 7 TYR A 81 ? TYR A 80 . ? 1_555 ? 15 AC4 7 VAL A 82 ? VAL A 81 . ? 1_555 ? 16 AC4 7 GLY A 122 ? GLY A 121 . ? 1_555 ? 17 AC4 7 TYR A 124 ? TYR A 123 . ? 1_555 ? 18 AC4 7 ILE A 173 ? ILE A 172 . ? 1_555 ? 19 AC4 7 ARG A 181 ? ARG A 180 . ? 1_555 ? 20 AC4 7 SO4 D . ? SO4 A 270 . ? 1_555 ? # _atom_sites.entry_id 2P8N _atom_sites.fract_transf_matrix[1][1] 0.014671 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.014671 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.007082 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 0 ? ? ? A . n A 1 2 ILE 2 1 ? ? ? A . n A 1 3 PHE 3 2 ? ? ? A . n A 1 4 PRO 4 3 ? ? ? A . n A 1 5 LYS 5 4 ? ? ? A . n A 1 6 GLN 6 5 ? ? ? A . n A 1 7 TYR 7 6 6 TYR TYR A . n A 1 8 PRO 8 7 7 PRO PRO A . n A 1 9 ILE 9 8 8 ILE ILE A . n A 1 10 ILE 10 9 9 ILE ILE A . n A 1 11 ASN 11 10 10 ASN ASN A . n A 1 12 PHE 12 11 11 PHE PHE A . n A 1 13 THR 13 12 12 THR THR A . n A 1 14 THR 14 13 13 THR THR A . n A 1 15 ALA 15 14 14 ALA ALA A . n A 1 16 GLY 16 15 15 GLY GLY A . n A 1 17 ALA 17 16 16 ALA ALA A . n A 1 18 THR 18 17 17 THR THR A . n A 1 19 VAL 19 18 18 VAL VAL A . n A 1 20 GLN 20 19 19 GLN GLN A . n A 1 21 SER 21 20 20 SER SER A . n A 1 22 TYR 22 21 21 TYR TYR A . n A 1 23 THR 23 22 22 THR THR A . n A 1 24 ASN 24 23 23 ASN ASN A . n A 1 25 PHE 25 24 24 PHE PHE A . n A 1 26 ILE 26 25 25 ILE ILE A . n A 1 27 ARG 27 26 26 ARG ARG A . n A 1 28 ALA 28 27 27 ALA ALA A . n A 1 29 VAL 29 28 28 VAL VAL A . n A 1 30 ARG 30 29 29 ARG ARG A . n A 1 31 GLY 31 30 30 GLY GLY A . n A 1 32 ARG 32 31 31 ARG ARG A . n A 1 33 LEU 33 32 32 LEU LEU A . n A 1 34 THR 34 33 33 THR THR A . n A 1 35 THR 35 34 34 THR THR A . n A 1 36 GLY 36 35 35 GLY GLY A . n A 1 37 ALA 37 36 36 ALA ALA A . n A 1 38 ASP 38 37 37 ASP ASP A . n A 1 39 VAL 39 38 38 VAL VAL A . n A 1 40 ARG 40 39 39 ARG ARG A . n A 1 41 HIS 41 40 40 HIS HIS A . n A 1 42 GLU 42 41 41 GLU GLU A . n A 1 43 ILE 43 42 42 ILE ILE A . n A 1 44 PRO 44 43 43 PRO PRO A . n A 1 45 VAL 45 44 44 VAL VAL A . n A 1 46 LEU 46 45 45 LEU LEU A . n A 1 47 PRO 47 46 46 PRO PRO A . n A 1 48 ASN 48 47 47 ASN ASN A . n A 1 49 ARG 49 48 48 ARG ARG A . n A 1 50 VAL 50 49 49 VAL VAL A . n A 1 51 GLY 51 50 50 GLY GLY A . n A 1 52 LEU 52 51 51 LEU LEU A . n A 1 53 PRO 53 52 52 PRO PRO A . n A 1 54 ILE 54 53 53 ILE ILE A . n A 1 55 ASN 55 54 54 ASN ASN A . n A 1 56 GLN 56 55 55 GLN GLN A . n A 1 57 ARG 57 56 56 ARG ARG A . n A 1 58 PHE 58 57 57 PHE PHE A . n A 1 59 ILE 59 58 58 ILE ILE A . n A 1 60 LEU 60 59 59 LEU LEU A . n A 1 61 VAL 61 60 60 VAL VAL A . n A 1 62 GLU 62 61 61 GLU GLU A . n A 1 63 LEU 63 62 62 LEU LEU A . n A 1 64 SER 64 63 63 SER SER A . n A 1 65 ASN 65 64 64 ASN ASN A . n A 1 66 HIS 66 65 65 HIS HIS A . n A 1 67 ALA 67 66 66 ALA ALA A . n A 1 68 GLU 68 67 67 GLU GLU A . n A 1 69 LEU 69 68 68 LEU LEU A . n A 1 70 SER 70 69 69 SER SER A . n A 1 71 VAL 71 70 70 VAL VAL A . n A 1 72 THR 72 71 71 THR THR A . n A 1 73 LEU 73 72 72 LEU LEU A . n A 1 74 ALA 74 73 73 ALA ALA A . n A 1 75 LEU 75 74 74 LEU LEU A . n A 1 76 ASP 76 75 75 ASP ASP A . n A 1 77 VAL 77 76 76 VAL VAL A . n A 1 78 THR 78 77 77 THR THR A . n A 1 79 ASN 79 78 78 ASN ASN A . n A 1 80 ALA 80 79 79 ALA ALA A . n A 1 81 TYR 81 80 80 TYR TYR A . n A 1 82 VAL 82 81 81 VAL VAL A . n A 1 83 VAL 83 82 82 VAL VAL A . n A 1 84 GLY 84 83 83 GLY GLY A . n A 1 85 TYR 85 84 84 TYR TYR A . n A 1 86 ARG 86 85 85 ARG ARG A . n A 1 87 ALA 87 86 86 ALA ALA A . n A 1 88 GLY 88 87 87 GLY GLY A . n A 1 89 ASN 89 88 88 ASN ASN A . n A 1 90 SER 90 89 89 SER SER A . n A 1 91 ALA 91 90 90 ALA ALA A . n A 1 92 TYR 92 91 91 TYR TYR A . n A 1 93 PHE 93 92 92 PHE PHE A . n A 1 94 PHE 94 93 93 PHE PHE A . n A 1 95 HIS 95 94 94 HIS HIS A . n A 1 96 PRO 96 95 95 PRO PRO A . n A 1 97 ASP 97 96 96 ASP ASP A . n A 1 98 ASN 98 97 97 ASN ASN A . n A 1 99 GLN 99 98 98 GLN GLN A . n A 1 100 GLU 100 99 99 GLU GLU A . n A 1 101 ASP 101 100 100 ASP ASP A . n A 1 102 ALA 102 101 101 ALA ALA A . n A 1 103 GLU 103 102 102 GLU GLU A . n A 1 104 ALA 104 103 103 ALA ALA A . n A 1 105 ILE 105 104 104 ILE ILE A . n A 1 106 THR 106 105 105 THR THR A . n A 1 107 HIS 107 106 106 HIS HIS A . n A 1 108 LEU 108 107 107 LEU LEU A . n A 1 109 PHE 109 108 108 PHE PHE A . n A 1 110 THR 110 109 109 THR THR A . n A 1 111 ASP 111 110 110 ASP ASP A . n A 1 112 VAL 112 111 111 VAL VAL A . n A 1 113 GLN 113 112 112 GLN GLN A . n A 1 114 ASN 114 113 113 ASN ASN A . n A 1 115 ARG 115 114 114 ARG ARG A . n A 1 116 TYR 116 115 115 TYR TYR A . n A 1 117 THR 117 116 116 THR THR A . n A 1 118 PHE 118 117 117 PHE PHE A . n A 1 119 ALA 119 118 118 ALA ALA A . n A 1 120 PHE 120 119 119 PHE PHE A . n A 1 121 GLY 121 120 120 GLY GLY A . n A 1 122 GLY 122 121 121 GLY GLY A . n A 1 123 ASN 123 122 122 ASN ASN A . n A 1 124 TYR 124 123 123 TYR TYR A . n A 1 125 ASP 125 124 124 ASP ASP A . n A 1 126 ARG 126 125 125 ARG ARG A . n A 1 127 LEU 127 126 126 LEU LEU A . n A 1 128 GLU 128 127 127 GLU GLU A . n A 1 129 GLN 129 128 128 GLN GLN A . n A 1 130 LEU 130 129 129 LEU LEU A . n A 1 131 ALA 131 130 130 ALA ALA A . n A 1 132 GLY 132 131 131 GLY GLY A . n A 1 133 ASN 133 132 132 ASN ASN A . n A 1 134 LEU 134 133 133 LEU LEU A . n A 1 135 ARG 135 134 134 ARG ARG A . n A 1 136 GLU 136 135 135 GLU GLU A . n A 1 137 ASN 137 136 136 ASN ASN A . n A 1 138 ILE 138 137 137 ILE ILE A . n A 1 139 GLU 139 138 138 GLU GLU A . n A 1 140 LEU 140 139 139 LEU LEU A . n A 1 141 GLY 141 140 140 GLY GLY A . n A 1 142 ASN 142 141 141 ASN ASN A . n A 1 143 GLY 143 142 142 GLY GLY A . n A 1 144 PRO 144 143 143 PRO PRO A . n A 1 145 LEU 145 144 144 LEU LEU A . n A 1 146 GLU 146 145 145 GLU GLU A . n A 1 147 GLU 147 146 146 GLU GLU A . n A 1 148 ALA 148 147 147 ALA ALA A . n A 1 149 ILE 149 148 148 ILE ILE A . n A 1 150 SER 150 149 149 SER SER A . n A 1 151 ALA 151 150 150 ALA ALA A . n A 1 152 LEU 152 151 151 LEU LEU A . n A 1 153 TYR 153 152 152 TYR TYR A . n A 1 154 TYR 154 153 153 TYR TYR A . n A 1 155 TYR 155 154 154 TYR TYR A . n A 1 156 SER 156 155 155 SER SER A . n A 1 157 THR 157 156 156 THR THR A . n A 1 158 GLY 158 157 157 GLY GLY A . n A 1 159 GLY 159 158 158 GLY GLY A . n A 1 160 THR 160 159 159 THR THR A . n A 1 161 GLN 161 160 160 GLN GLN A . n A 1 162 LEU 162 161 161 LEU LEU A . n A 1 163 PRO 163 162 162 PRO PRO A . n A 1 164 THR 164 163 163 THR THR A . n A 1 165 LEU 165 164 164 LEU LEU A . n A 1 166 ALA 166 165 165 ALA ALA A . n A 1 167 ARG 167 166 166 ARG ARG A . n A 1 168 SER 168 167 167 SER SER A . n A 1 169 PHE 169 168 168 PHE PHE A . n A 1 170 ILE 170 169 169 ILE ILE A . n A 1 171 ILE 171 170 170 ILE ILE A . n A 1 172 CYS 172 171 171 CYS CYS A . n A 1 173 ILE 173 172 172 ILE ILE A . n A 1 174 GLN 174 173 173 GLN GLN A . n A 1 175 MET 175 174 174 MET MET A . n A 1 176 ILE 176 175 175 ILE ILE A . n A 1 177 SER 177 176 176 SER SER A . n A 1 178 GLU 178 177 177 GLU GLU A . n A 1 179 ALA 179 178 178 ALA ALA A . n A 1 180 ALA 180 179 179 ALA ALA A . n A 1 181 ARG 181 180 180 ARG ARG A . n A 1 182 PHE 182 181 181 PHE PHE A . n A 1 183 GLN 183 182 182 GLN GLN A . n A 1 184 TYR 184 183 183 TYR TYR A . n A 1 185 ILE 185 184 184 ILE ILE A . n A 1 186 GLU 186 185 185 GLU GLU A . n A 1 187 GLY 187 186 186 GLY GLY A . n A 1 188 GLU 188 187 187 GLU GLU A . n A 1 189 MET 189 188 188 MET MET A . n A 1 190 ARG 190 189 189 ARG ARG A . n A 1 191 THR 191 190 190 THR THR A . n A 1 192 ARG 192 191 191 ARG ARG A . n A 1 193 ILE 193 192 192 ILE ILE A . n A 1 194 ARG 194 193 193 ARG ARG A . n A 1 195 TYR 195 194 194 TYR TYR A . n A 1 196 ASN 196 195 195 ASN ASN A . n A 1 197 ARG 197 196 196 ARG ARG A . n A 1 198 ARG 198 197 197 ARG ARG A . n A 1 199 SER 199 198 198 SER SER A . n A 1 200 ALA 200 199 199 ALA ALA A . n A 1 201 PRO 201 200 200 PRO PRO A . n A 1 202 ASP 202 201 201 ASP ASP A . n A 1 203 PRO 203 202 202 PRO PRO A . n A 1 204 SER 204 203 203 SER SER A . n A 1 205 VAL 205 204 204 VAL VAL A . n A 1 206 ILE 206 205 205 ILE ILE A . n A 1 207 THR 207 206 206 THR THR A . n A 1 208 LEU 208 207 207 LEU LEU A . n A 1 209 GLU 209 208 208 GLU GLU A . n A 1 210 ASN 210 209 209 ASN ASN A . n A 1 211 SER 211 210 210 SER SER A . n A 1 212 TRP 212 211 211 TRP TRP A . n A 1 213 GLY 213 212 212 GLY GLY A . n A 1 214 ARG 214 213 213 ARG ARG A . n A 1 215 LEU 215 214 214 LEU LEU A . n A 1 216 SER 216 215 215 SER SER A . n A 1 217 THR 217 216 216 THR THR A . n A 1 218 ALA 218 217 217 ALA ALA A . n A 1 219 ILE 219 218 218 ILE ILE A . n A 1 220 GLN 220 219 219 GLN GLN A . n A 1 221 GLU 221 220 220 GLU GLU A . n A 1 222 SER 222 221 221 SER SER A . n A 1 223 ASN 223 222 222 ASN ASN A . n A 1 224 GLN 224 223 223 GLN GLN A . n A 1 225 GLY 225 224 224 GLY GLY A . n A 1 226 ALA 226 225 225 ALA ALA A . n A 1 227 PHE 227 226 226 PHE PHE A . n A 1 228 ALA 228 227 227 ALA ALA A . n A 1 229 SER 229 228 228 SER SER A . n A 1 230 PRO 230 229 229 PRO PRO A . n A 1 231 ILE 231 230 230 ILE ILE A . n A 1 232 GLN 232 231 231 GLN GLN A . n A 1 233 LEU 233 232 232 LEU LEU A . n A 1 234 GLN 234 233 233 GLN GLN A . n A 1 235 ARG 235 234 234 ARG ARG A . n A 1 236 ARG 236 235 235 ARG ARG A . n A 1 237 ASN 237 236 236 ASN ASN A . n A 1 238 GLY 238 237 237 GLY GLY A . n A 1 239 SER 239 238 238 SER SER A . n A 1 240 LYS 240 239 239 LYS LYS A . n A 1 241 PHE 241 240 240 PHE PHE A . n A 1 242 SER 242 241 241 SER SER A . n A 1 243 VAL 243 242 242 VAL VAL A . n A 1 244 TYR 244 243 243 TYR TYR A . n A 1 245 ASP 245 244 244 ASP ASP A . n A 1 246 VAL 246 245 245 VAL VAL A . n A 1 247 SER 247 246 246 SER SER A . n A 1 248 ILE 248 247 247 ILE ILE A . n A 1 249 LEU 249 248 248 LEU LEU A . n A 1 250 ILE 250 249 249 ILE ILE A . n A 1 251 PRO 251 250 250 PRO PRO A . n A 1 252 ILE 252 251 251 ILE ILE A . n A 1 253 ILE 253 252 252 ILE ILE A . n A 1 254 ALA 254 253 253 ALA ALA A . n A 1 255 LEU 255 254 254 LEU LEU A . n A 1 256 MET 256 255 255 MET MET A . n A 1 257 VAL 257 256 256 VAL VAL A . n A 1 258 TYR 258 257 257 TYR TYR A . n A 1 259 ARG 259 258 258 ARG ARG A . n A 1 260 CYS 260 259 259 CYS CYS A . n A 1 261 ALA 261 260 260 ALA ALA A . n A 1 262 PRO 262 261 261 PRO PRO A . n A 1 263 PRO 263 262 262 PRO PRO A . n A 1 264 PRO 264 263 263 PRO PRO A . n A 1 265 SER 265 264 ? ? ? A . n A 1 266 SER 266 265 ? ? ? A . n A 1 267 GLN 267 266 ? ? ? A . n A 1 268 PHE 268 267 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 SO4 1 268 265 SO4 SO4 A . C 2 SO4 1 269 266 SO4 SO4 A . D 2 SO4 1 270 267 SO4 SO4 A . E 3 ADE 1 271 264 ADE ADE A . F 4 HOH 1 272 268 HOH HOH A . F 4 HOH 2 273 269 HOH HOH A . F 4 HOH 3 274 271 HOH HOH A . F 4 HOH 4 275 272 HOH HOH A . F 4 HOH 5 276 273 HOH HOH A . F 4 HOH 6 277 274 HOH HOH A . F 4 HOH 7 278 275 HOH HOH A . F 4 HOH 8 279 276 HOH HOH A . F 4 HOH 9 280 277 HOH HOH A . F 4 HOH 10 281 278 HOH HOH A . F 4 HOH 11 282 279 HOH HOH A . F 4 HOH 12 283 280 HOH HOH A . F 4 HOH 13 284 281 HOH HOH A . F 4 HOH 14 285 282 HOH HOH A . F 4 HOH 15 286 283 HOH HOH A . F 4 HOH 16 287 285 HOH HOH A . F 4 HOH 17 288 286 HOH HOH A . F 4 HOH 18 289 287 HOH HOH A . F 4 HOH 19 290 288 HOH HOH A . F 4 HOH 20 291 289 HOH HOH A . F 4 HOH 21 292 290 HOH HOH A . F 4 HOH 22 293 291 HOH HOH A . F 4 HOH 23 294 292 HOH HOH A . F 4 HOH 24 295 293 HOH HOH A . F 4 HOH 25 296 294 HOH HOH A . F 4 HOH 26 297 295 HOH HOH A . F 4 HOH 27 298 296 HOH HOH A . F 4 HOH 28 299 329 HOH HOH A . F 4 HOH 29 300 331 HOH HOH A . F 4 HOH 30 301 332 HOH HOH A . F 4 HOH 31 302 333 HOH HOH A . F 4 HOH 32 303 334 HOH HOH A . F 4 HOH 33 304 335 HOH HOH A . F 4 HOH 34 305 336 HOH HOH A . F 4 HOH 35 306 337 HOH HOH A . F 4 HOH 36 307 338 HOH HOH A . F 4 HOH 37 308 339 HOH HOH A . F 4 HOH 38 309 340 HOH HOH A . F 4 HOH 39 310 341 HOH HOH A . F 4 HOH 40 311 342 HOH HOH A . F 4 HOH 41 312 343 HOH HOH A . F 4 HOH 42 313 344 HOH HOH A . F 4 HOH 43 314 345 HOH HOH A . F 4 HOH 44 315 346 HOH HOH A . F 4 HOH 45 316 347 HOH HOH A . F 4 HOH 46 317 348 HOH HOH A . F 4 HOH 47 318 349 HOH HOH A . F 4 HOH 48 319 350 HOH HOH A . F 4 HOH 49 320 351 HOH HOH A . F 4 HOH 50 321 352 HOH HOH A . F 4 HOH 51 322 353 HOH HOH A . F 4 HOH 52 323 354 HOH HOH A . F 4 HOH 53 324 356 HOH HOH A . F 4 HOH 54 325 418 HOH HOH A . F 4 HOH 55 326 419 HOH HOH A . F 4 HOH 56 327 420 HOH HOH A . F 4 HOH 57 328 421 HOH HOH A . F 4 HOH 58 329 422 HOH HOH A . F 4 HOH 59 330 423 HOH HOH A . F 4 HOH 60 331 424 HOH HOH A . F 4 HOH 61 332 425 HOH HOH A . F 4 HOH 62 333 426 HOH HOH A . F 4 HOH 63 334 427 HOH HOH A . F 4 HOH 64 335 428 HOH HOH A . F 4 HOH 65 336 430 HOH HOH A . F 4 HOH 66 337 431 HOH HOH A . F 4 HOH 67 338 432 HOH HOH A . F 4 HOH 68 339 433 HOH HOH A . F 4 HOH 69 340 434 HOH HOH A . F 4 HOH 70 341 435 HOH HOH A . F 4 HOH 71 342 436 HOH HOH A . F 4 HOH 72 343 437 HOH HOH A . F 4 HOH 73 344 438 HOH HOH A . F 4 HOH 74 345 439 HOH HOH A . F 4 HOH 75 346 440 HOH HOH A . F 4 HOH 76 347 441 HOH HOH A . F 4 HOH 77 348 442 HOH HOH A . F 4 HOH 78 349 443 HOH HOH A . F 4 HOH 79 350 444 HOH HOH A . F 4 HOH 80 351 446 HOH HOH A . F 4 HOH 81 352 447 HOH HOH A . F 4 HOH 82 353 479 HOH HOH A . F 4 HOH 83 354 480 HOH HOH A . F 4 HOH 84 355 481 HOH HOH A . F 4 HOH 85 356 482 HOH HOH A . F 4 HOH 86 357 483 HOH HOH A . F 4 HOH 87 358 484 HOH HOH A . F 4 HOH 88 359 485 HOH HOH A . F 4 HOH 89 360 486 HOH HOH A . F 4 HOH 90 361 487 HOH HOH A . F 4 HOH 91 362 488 HOH HOH A . F 4 HOH 92 363 490 HOH HOH A . F 4 HOH 93 364 492 HOH HOH A . F 4 HOH 94 365 494 HOH HOH A . F 4 HOH 95 366 495 HOH HOH A . F 4 HOH 96 367 496 HOH HOH A . F 4 HOH 97 368 497 HOH HOH A . F 4 HOH 98 369 498 HOH HOH A . F 4 HOH 99 370 510 HOH HOH A . F 4 HOH 100 371 514 HOH HOH A . F 4 HOH 101 372 515 HOH HOH A . F 4 HOH 102 373 516 HOH HOH A . F 4 HOH 103 374 517 HOH HOH A . F 4 HOH 104 375 518 HOH HOH A . F 4 HOH 105 376 520 HOH HOH A . F 4 HOH 106 377 521 HOH HOH A . F 4 HOH 107 378 522 HOH HOH A . F 4 HOH 108 379 523 HOH HOH A . F 4 HOH 109 380 524 HOH HOH A . F 4 HOH 110 381 525 HOH HOH A . F 4 HOH 111 382 528 HOH HOH A . F 4 HOH 112 383 529 HOH HOH A . F 4 HOH 113 384 530 HOH HOH A . F 4 HOH 114 385 531 HOH HOH A . F 4 HOH 115 386 532 HOH HOH A . F 4 HOH 116 387 533 HOH HOH A . F 4 HOH 117 388 534 HOH HOH A . F 4 HOH 118 389 535 HOH HOH A . F 4 HOH 119 390 536 HOH HOH A . F 4 HOH 120 391 537 HOH HOH A . F 4 HOH 121 392 538 HOH HOH A . F 4 HOH 122 393 539 HOH HOH A . F 4 HOH 123 394 540 HOH HOH A . F 4 HOH 124 395 541 HOH HOH A . F 4 HOH 125 396 542 HOH HOH A . F 4 HOH 126 397 543 HOH HOH A . F 4 HOH 127 398 544 HOH HOH A . F 4 HOH 128 399 545 HOH HOH A . F 4 HOH 129 400 546 HOH HOH A . F 4 HOH 130 401 547 HOH HOH A . F 4 HOH 131 402 548 HOH HOH A . F 4 HOH 132 403 552 HOH HOH A . F 4 HOH 133 404 553 HOH HOH A . F 4 HOH 134 405 554 HOH HOH A . F 4 HOH 135 406 555 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2007-11-20 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2023-08-30 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Derived calculations' 5 3 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' chem_comp_atom 2 3 'Structure model' chem_comp_bond 3 3 'Structure model' database_2 4 3 'Structure model' pdbx_initial_refinement_model 5 3 'Structure model' struct_ref_seq_dif 6 3 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_database_2.pdbx_DOI' 2 3 'Structure model' '_database_2.pdbx_database_accession' 3 3 'Structure model' '_struct_ref_seq_dif.details' 4 3 'Structure model' '_struct_site.pdbx_auth_asym_id' 5 3 'Structure model' '_struct_site.pdbx_auth_comp_id' 6 3 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal CNS refinement . ? 1 HKL-2000 'data reduction' . ? 2 SCALEPACK 'data scaling' . ? 3 CNS phasing . ? 4 # _pdbx_validate_symm_contact.id 1 _pdbx_validate_symm_contact.PDB_model_num 1 _pdbx_validate_symm_contact.auth_atom_id_1 O _pdbx_validate_symm_contact.auth_asym_id_1 A _pdbx_validate_symm_contact.auth_comp_id_1 HOH _pdbx_validate_symm_contact.auth_seq_id_1 388 _pdbx_validate_symm_contact.PDB_ins_code_1 ? _pdbx_validate_symm_contact.label_alt_id_1 ? _pdbx_validate_symm_contact.site_symmetry_1 1_555 _pdbx_validate_symm_contact.auth_atom_id_2 O _pdbx_validate_symm_contact.auth_asym_id_2 A _pdbx_validate_symm_contact.auth_comp_id_2 HOH _pdbx_validate_symm_contact.auth_seq_id_2 388 _pdbx_validate_symm_contact.PDB_ins_code_2 ? _pdbx_validate_symm_contact.label_alt_id_2 ? _pdbx_validate_symm_contact.site_symmetry_2 8_554 _pdbx_validate_symm_contact.dist 1.72 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET 0 ? A MET 1 2 1 Y 1 A ILE 1 ? A ILE 2 3 1 Y 1 A PHE 2 ? A PHE 3 4 1 Y 1 A PRO 3 ? A PRO 4 5 1 Y 1 A LYS 4 ? A LYS 5 6 1 Y 1 A GLN 5 ? A GLN 6 7 1 Y 1 A SER 264 ? A SER 265 8 1 Y 1 A SER 265 ? A SER 266 9 1 Y 1 A GLN 266 ? A GLN 267 10 1 Y 1 A PHE 267 ? A PHE 268 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ADE N9 N Y N 1 ADE C8 C Y N 2 ADE N7 N Y N 3 ADE C5 C Y N 4 ADE C6 C Y N 5 ADE N6 N N N 6 ADE N1 N Y N 7 ADE C2 C Y N 8 ADE N3 N Y N 9 ADE C4 C Y N 10 ADE HN9 H N N 11 ADE H8 H N N 12 ADE HN61 H N N 13 ADE HN62 H N N 14 ADE H2 H N N 15 ALA N N N N 16 ALA CA C N S 17 ALA C C N N 18 ALA O O N N 19 ALA CB C N N 20 ALA OXT O N N 21 ALA H H N N 22 ALA H2 H N N 23 ALA HA H N N 24 ALA HB1 H N N 25 ALA HB2 H N N 26 ALA HB3 H N N 27 ALA HXT H N N 28 ARG N N N N 29 ARG CA C N S 30 ARG C C N N 31 ARG O O N N 32 ARG CB C N N 33 ARG CG C N N 34 ARG CD C N N 35 ARG NE N N N 36 ARG CZ C N N 37 ARG NH1 N N N 38 ARG NH2 N N N 39 ARG OXT O N N 40 ARG H H N N 41 ARG H2 H N N 42 ARG HA H N N 43 ARG HB2 H N N 44 ARG HB3 H N N 45 ARG HG2 H N N 46 ARG HG3 H N N 47 ARG HD2 H N N 48 ARG HD3 H N N 49 ARG HE H N N 50 ARG HH11 H N N 51 ARG HH12 H N N 52 ARG HH21 H N N 53 ARG HH22 H N N 54 ARG HXT H N N 55 ASN N N N N 56 ASN CA C N S 57 ASN C C N N 58 ASN O O N N 59 ASN CB C N N 60 ASN CG C N N 61 ASN OD1 O N N 62 ASN ND2 N N N 63 ASN OXT O N N 64 ASN H H N N 65 ASN H2 H N N 66 ASN HA H N N 67 ASN HB2 H N N 68 ASN HB3 H N N 69 ASN HD21 H N N 70 ASN HD22 H N N 71 ASN HXT H N N 72 ASP N N N N 73 ASP CA C N S 74 ASP C C N N 75 ASP O O N N 76 ASP CB C N N 77 ASP CG C N N 78 ASP OD1 O N N 79 ASP OD2 O N N 80 ASP OXT O N N 81 ASP H H N N 82 ASP H2 H N N 83 ASP HA H N N 84 ASP HB2 H N N 85 ASP HB3 H N N 86 ASP HD2 H N N 87 ASP HXT H N N 88 CYS N N N N 89 CYS CA C N R 90 CYS C C N N 91 CYS O O N N 92 CYS CB C N N 93 CYS SG S N N 94 CYS OXT O N N 95 CYS H H N N 96 CYS H2 H N N 97 CYS HA H N N 98 CYS HB2 H N N 99 CYS HB3 H N N 100 CYS HG H N N 101 CYS HXT H N N 102 GLN N N N N 103 GLN CA C N S 104 GLN C C N N 105 GLN O O N N 106 GLN CB C N N 107 GLN CG C N N 108 GLN CD C N N 109 GLN OE1 O N N 110 GLN NE2 N N N 111 GLN OXT O N N 112 GLN H H N N 113 GLN H2 H N N 114 GLN HA H N N 115 GLN HB2 H N N 116 GLN HB3 H N N 117 GLN HG2 H N N 118 GLN HG3 H N N 119 GLN HE21 H N N 120 GLN HE22 H N N 121 GLN HXT H N N 122 GLU N N N N 123 GLU CA C N S 124 GLU C C N N 125 GLU O O N N 126 GLU CB C N N 127 GLU CG C N N 128 GLU CD C N N 129 GLU OE1 O N N 130 GLU OE2 O N N 131 GLU OXT O N N 132 GLU H H N N 133 GLU H2 H N N 134 GLU HA H N N 135 GLU HB2 H N N 136 GLU HB3 H N N 137 GLU HG2 H N N 138 GLU HG3 H N N 139 GLU HE2 H N N 140 GLU HXT H N N 141 GLY N N N N 142 GLY CA C N N 143 GLY C C N N 144 GLY O O N N 145 GLY OXT O N N 146 GLY H H N N 147 GLY H2 H N N 148 GLY HA2 H N N 149 GLY HA3 H N N 150 GLY HXT H N N 151 HIS N N N N 152 HIS CA C N S 153 HIS C C N N 154 HIS O O N N 155 HIS CB C N N 156 HIS CG C Y N 157 HIS ND1 N Y N 158 HIS CD2 C Y N 159 HIS CE1 C Y N 160 HIS NE2 N Y N 161 HIS OXT O N N 162 HIS H H N N 163 HIS H2 H N N 164 HIS HA H N N 165 HIS HB2 H N N 166 HIS HB3 H N N 167 HIS HD1 H N N 168 HIS HD2 H N N 169 HIS HE1 H N N 170 HIS HE2 H N N 171 HIS HXT H N N 172 HOH O O N N 173 HOH H1 H N N 174 HOH H2 H N N 175 ILE N N N N 176 ILE CA C N S 177 ILE C C N N 178 ILE O O N N 179 ILE CB C N S 180 ILE CG1 C N N 181 ILE CG2 C N N 182 ILE CD1 C N N 183 ILE OXT O N N 184 ILE H H N N 185 ILE H2 H N N 186 ILE HA H N N 187 ILE HB H N N 188 ILE HG12 H N N 189 ILE HG13 H N N 190 ILE HG21 H N N 191 ILE HG22 H N N 192 ILE HG23 H N N 193 ILE HD11 H N N 194 ILE HD12 H N N 195 ILE HD13 H N N 196 ILE HXT H N N 197 LEU N N N N 198 LEU CA C N S 199 LEU C C N N 200 LEU O O N N 201 LEU CB C N N 202 LEU CG C N N 203 LEU CD1 C N N 204 LEU CD2 C N N 205 LEU OXT O N N 206 LEU H H N N 207 LEU H2 H N N 208 LEU HA H N N 209 LEU HB2 H N N 210 LEU HB3 H N N 211 LEU HG H N N 212 LEU HD11 H N N 213 LEU HD12 H N N 214 LEU HD13 H N N 215 LEU HD21 H N N 216 LEU HD22 H N N 217 LEU HD23 H N N 218 LEU HXT H N N 219 LYS N N N N 220 LYS CA C N S 221 LYS C C N N 222 LYS O O N N 223 LYS CB C N N 224 LYS CG C N N 225 LYS CD C N N 226 LYS CE C N N 227 LYS NZ N N N 228 LYS OXT O N N 229 LYS H H N N 230 LYS H2 H N N 231 LYS HA H N N 232 LYS HB2 H N N 233 LYS HB3 H N N 234 LYS HG2 H N N 235 LYS HG3 H N N 236 LYS HD2 H N N 237 LYS HD3 H N N 238 LYS HE2 H N N 239 LYS HE3 H N N 240 LYS HZ1 H N N 241 LYS HZ2 H N N 242 LYS HZ3 H N N 243 LYS HXT H N N 244 MET N N N N 245 MET CA C N S 246 MET C C N N 247 MET O O N N 248 MET CB C N N 249 MET CG C N N 250 MET SD S N N 251 MET CE C N N 252 MET OXT O N N 253 MET H H N N 254 MET H2 H N N 255 MET HA H N N 256 MET HB2 H N N 257 MET HB3 H N N 258 MET HG2 H N N 259 MET HG3 H N N 260 MET HE1 H N N 261 MET HE2 H N N 262 MET HE3 H N N 263 MET HXT H N N 264 PHE N N N N 265 PHE CA C N S 266 PHE C C N N 267 PHE O O N N 268 PHE CB C N N 269 PHE CG C Y N 270 PHE CD1 C Y N 271 PHE CD2 C Y N 272 PHE CE1 C Y N 273 PHE CE2 C Y N 274 PHE CZ C Y N 275 PHE OXT O N N 276 PHE H H N N 277 PHE H2 H N N 278 PHE HA H N N 279 PHE HB2 H N N 280 PHE HB3 H N N 281 PHE HD1 H N N 282 PHE HD2 H N N 283 PHE HE1 H N N 284 PHE HE2 H N N 285 PHE HZ H N N 286 PHE HXT H N N 287 PRO N N N N 288 PRO CA C N S 289 PRO C C N N 290 PRO O O N N 291 PRO CB C N N 292 PRO CG C N N 293 PRO CD C N N 294 PRO OXT O N N 295 PRO H H N N 296 PRO HA H N N 297 PRO HB2 H N N 298 PRO HB3 H N N 299 PRO HG2 H N N 300 PRO HG3 H N N 301 PRO HD2 H N N 302 PRO HD3 H N N 303 PRO HXT H N N 304 SER N N N N 305 SER CA C N S 306 SER C C N N 307 SER O O N N 308 SER CB C N N 309 SER OG O N N 310 SER OXT O N N 311 SER H H N N 312 SER H2 H N N 313 SER HA H N N 314 SER HB2 H N N 315 SER HB3 H N N 316 SER HG H N N 317 SER HXT H N N 318 SO4 S S N N 319 SO4 O1 O N N 320 SO4 O2 O N N 321 SO4 O3 O N N 322 SO4 O4 O N N 323 THR N N N N 324 THR CA C N S 325 THR C C N N 326 THR O O N N 327 THR CB C N R 328 THR OG1 O N N 329 THR CG2 C N N 330 THR OXT O N N 331 THR H H N N 332 THR H2 H N N 333 THR HA H N N 334 THR HB H N N 335 THR HG1 H N N 336 THR HG21 H N N 337 THR HG22 H N N 338 THR HG23 H N N 339 THR HXT H N N 340 TRP N N N N 341 TRP CA C N S 342 TRP C C N N 343 TRP O O N N 344 TRP CB C N N 345 TRP CG C Y N 346 TRP CD1 C Y N 347 TRP CD2 C Y N 348 TRP NE1 N Y N 349 TRP CE2 C Y N 350 TRP CE3 C Y N 351 TRP CZ2 C Y N 352 TRP CZ3 C Y N 353 TRP CH2 C Y N 354 TRP OXT O N N 355 TRP H H N N 356 TRP H2 H N N 357 TRP HA H N N 358 TRP HB2 H N N 359 TRP HB3 H N N 360 TRP HD1 H N N 361 TRP HE1 H N N 362 TRP HE3 H N N 363 TRP HZ2 H N N 364 TRP HZ3 H N N 365 TRP HH2 H N N 366 TRP HXT H N N 367 TYR N N N N 368 TYR CA C N S 369 TYR C C N N 370 TYR O O N N 371 TYR CB C N N 372 TYR CG C Y N 373 TYR CD1 C Y N 374 TYR CD2 C Y N 375 TYR CE1 C Y N 376 TYR CE2 C Y N 377 TYR CZ C Y N 378 TYR OH O N N 379 TYR OXT O N N 380 TYR H H N N 381 TYR H2 H N N 382 TYR HA H N N 383 TYR HB2 H N N 384 TYR HB3 H N N 385 TYR HD1 H N N 386 TYR HD2 H N N 387 TYR HE1 H N N 388 TYR HE2 H N N 389 TYR HH H N N 390 TYR HXT H N N 391 VAL N N N N 392 VAL CA C N S 393 VAL C C N N 394 VAL O O N N 395 VAL CB C N N 396 VAL CG1 C N N 397 VAL CG2 C N N 398 VAL OXT O N N 399 VAL H H N N 400 VAL H2 H N N 401 VAL HA H N N 402 VAL HB H N N 403 VAL HG11 H N N 404 VAL HG12 H N N 405 VAL HG13 H N N 406 VAL HG21 H N N 407 VAL HG22 H N N 408 VAL HG23 H N N 409 VAL HXT H N N 410 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ADE N9 C8 sing Y N 1 ADE N9 C4 sing Y N 2 ADE N9 HN9 sing N N 3 ADE C8 N7 doub Y N 4 ADE C8 H8 sing N N 5 ADE N7 C5 sing Y N 6 ADE C5 C6 sing Y N 7 ADE C5 C4 doub Y N 8 ADE C6 N6 sing N N 9 ADE C6 N1 doub Y N 10 ADE N6 HN61 sing N N 11 ADE N6 HN62 sing N N 12 ADE N1 C2 sing Y N 13 ADE C2 N3 doub Y N 14 ADE C2 H2 sing N N 15 ADE N3 C4 sing Y N 16 ALA N CA sing N N 17 ALA N H sing N N 18 ALA N H2 sing N N 19 ALA CA C sing N N 20 ALA CA CB sing N N 21 ALA CA HA sing N N 22 ALA C O doub N N 23 ALA C OXT sing N N 24 ALA CB HB1 sing N N 25 ALA CB HB2 sing N N 26 ALA CB HB3 sing N N 27 ALA OXT HXT sing N N 28 ARG N CA sing N N 29 ARG N H sing N N 30 ARG N H2 sing N N 31 ARG CA C sing N N 32 ARG CA CB sing N N 33 ARG CA HA sing N N 34 ARG C O doub N N 35 ARG C OXT sing N N 36 ARG CB CG sing N N 37 ARG CB HB2 sing N N 38 ARG CB HB3 sing N N 39 ARG CG CD sing N N 40 ARG CG HG2 sing N N 41 ARG CG HG3 sing N N 42 ARG CD NE sing N N 43 ARG CD HD2 sing N N 44 ARG CD HD3 sing N N 45 ARG NE CZ sing N N 46 ARG NE HE sing N N 47 ARG CZ NH1 sing N N 48 ARG CZ NH2 doub N N 49 ARG NH1 HH11 sing N N 50 ARG NH1 HH12 sing N N 51 ARG NH2 HH21 sing N N 52 ARG NH2 HH22 sing N N 53 ARG OXT HXT sing N N 54 ASN N CA sing N N 55 ASN N H sing N N 56 ASN N H2 sing N N 57 ASN CA C sing N N 58 ASN CA CB sing N N 59 ASN CA HA sing N N 60 ASN C O doub N N 61 ASN C OXT sing N N 62 ASN CB CG sing N N 63 ASN CB HB2 sing N N 64 ASN CB HB3 sing N N 65 ASN CG OD1 doub N N 66 ASN CG ND2 sing N N 67 ASN ND2 HD21 sing N N 68 ASN ND2 HD22 sing N N 69 ASN OXT HXT sing N N 70 ASP N CA sing N N 71 ASP N H sing N N 72 ASP N H2 sing N N 73 ASP CA C sing N N 74 ASP CA CB sing N N 75 ASP CA HA sing N N 76 ASP C O doub N N 77 ASP C OXT sing N N 78 ASP CB CG sing N N 79 ASP CB HB2 sing N N 80 ASP CB HB3 sing N N 81 ASP CG OD1 doub N N 82 ASP CG OD2 sing N N 83 ASP OD2 HD2 sing N N 84 ASP OXT HXT sing N N 85 CYS N CA sing N N 86 CYS N H sing N N 87 CYS N H2 sing N N 88 CYS CA C sing N N 89 CYS CA CB sing N N 90 CYS CA HA sing N N 91 CYS C O doub N N 92 CYS C OXT sing N N 93 CYS CB SG sing N N 94 CYS CB HB2 sing N N 95 CYS CB HB3 sing N N 96 CYS SG HG sing N N 97 CYS OXT HXT sing N N 98 GLN N CA sing N N 99 GLN N H sing N N 100 GLN N H2 sing N N 101 GLN CA C sing N N 102 GLN CA CB sing N N 103 GLN CA HA sing N N 104 GLN C O doub N N 105 GLN C OXT sing N N 106 GLN CB CG sing N N 107 GLN CB HB2 sing N N 108 GLN CB HB3 sing N N 109 GLN CG CD sing N N 110 GLN CG HG2 sing N N 111 GLN CG HG3 sing N N 112 GLN CD OE1 doub N N 113 GLN CD NE2 sing N N 114 GLN NE2 HE21 sing N N 115 GLN NE2 HE22 sing N N 116 GLN OXT HXT sing N N 117 GLU N CA sing N N 118 GLU N H sing N N 119 GLU N H2 sing N N 120 GLU CA C sing N N 121 GLU CA CB sing N N 122 GLU CA HA sing N N 123 GLU C O doub N N 124 GLU C OXT sing N N 125 GLU CB CG sing N N 126 GLU CB HB2 sing N N 127 GLU CB HB3 sing N N 128 GLU CG CD sing N N 129 GLU CG HG2 sing N N 130 GLU CG HG3 sing N N 131 GLU CD OE1 doub N N 132 GLU CD OE2 sing N N 133 GLU OE2 HE2 sing N N 134 GLU OXT HXT sing N N 135 GLY N CA sing N N 136 GLY N H sing N N 137 GLY N H2 sing N N 138 GLY CA C sing N N 139 GLY CA HA2 sing N N 140 GLY CA HA3 sing N N 141 GLY C O doub N N 142 GLY C OXT sing N N 143 GLY OXT HXT sing N N 144 HIS N CA sing N N 145 HIS N H sing N N 146 HIS N H2 sing N N 147 HIS CA C sing N N 148 HIS CA CB sing N N 149 HIS CA HA sing N N 150 HIS C O doub N N 151 HIS C OXT sing N N 152 HIS CB CG sing N N 153 HIS CB HB2 sing N N 154 HIS CB HB3 sing N N 155 HIS CG ND1 sing Y N 156 HIS CG CD2 doub Y N 157 HIS ND1 CE1 doub Y N 158 HIS ND1 HD1 sing N N 159 HIS CD2 NE2 sing Y N 160 HIS CD2 HD2 sing N N 161 HIS CE1 NE2 sing Y N 162 HIS CE1 HE1 sing N N 163 HIS NE2 HE2 sing N N 164 HIS OXT HXT sing N N 165 HOH O H1 sing N N 166 HOH O H2 sing N N 167 ILE N CA sing N N 168 ILE N H sing N N 169 ILE N H2 sing N N 170 ILE CA C sing N N 171 ILE CA CB sing N N 172 ILE CA HA sing N N 173 ILE C O doub N N 174 ILE C OXT sing N N 175 ILE CB CG1 sing N N 176 ILE CB CG2 sing N N 177 ILE CB HB sing N N 178 ILE CG1 CD1 sing N N 179 ILE CG1 HG12 sing N N 180 ILE CG1 HG13 sing N N 181 ILE CG2 HG21 sing N N 182 ILE CG2 HG22 sing N N 183 ILE CG2 HG23 sing N N 184 ILE CD1 HD11 sing N N 185 ILE CD1 HD12 sing N N 186 ILE CD1 HD13 sing N N 187 ILE OXT HXT sing N N 188 LEU N CA sing N N 189 LEU N H sing N N 190 LEU N H2 sing N N 191 LEU CA C sing N N 192 LEU CA CB sing N N 193 LEU CA HA sing N N 194 LEU C O doub N N 195 LEU C OXT sing N N 196 LEU CB CG sing N N 197 LEU CB HB2 sing N N 198 LEU CB HB3 sing N N 199 LEU CG CD1 sing N N 200 LEU CG CD2 sing N N 201 LEU CG HG sing N N 202 LEU CD1 HD11 sing N N 203 LEU CD1 HD12 sing N N 204 LEU CD1 HD13 sing N N 205 LEU CD2 HD21 sing N N 206 LEU CD2 HD22 sing N N 207 LEU CD2 HD23 sing N N 208 LEU OXT HXT sing N N 209 LYS N CA sing N N 210 LYS N H sing N N 211 LYS N H2 sing N N 212 LYS CA C sing N N 213 LYS CA CB sing N N 214 LYS CA HA sing N N 215 LYS C O doub N N 216 LYS C OXT sing N N 217 LYS CB CG sing N N 218 LYS CB HB2 sing N N 219 LYS CB HB3 sing N N 220 LYS CG CD sing N N 221 LYS CG HG2 sing N N 222 LYS CG HG3 sing N N 223 LYS CD CE sing N N 224 LYS CD HD2 sing N N 225 LYS CD HD3 sing N N 226 LYS CE NZ sing N N 227 LYS CE HE2 sing N N 228 LYS CE HE3 sing N N 229 LYS NZ HZ1 sing N N 230 LYS NZ HZ2 sing N N 231 LYS NZ HZ3 sing N N 232 LYS OXT HXT sing N N 233 MET N CA sing N N 234 MET N H sing N N 235 MET N H2 sing N N 236 MET CA C sing N N 237 MET CA CB sing N N 238 MET CA HA sing N N 239 MET C O doub N N 240 MET C OXT sing N N 241 MET CB CG sing N N 242 MET CB HB2 sing N N 243 MET CB HB3 sing N N 244 MET CG SD sing N N 245 MET CG HG2 sing N N 246 MET CG HG3 sing N N 247 MET SD CE sing N N 248 MET CE HE1 sing N N 249 MET CE HE2 sing N N 250 MET CE HE3 sing N N 251 MET OXT HXT sing N N 252 PHE N CA sing N N 253 PHE N H sing N N 254 PHE N H2 sing N N 255 PHE CA C sing N N 256 PHE CA CB sing N N 257 PHE CA HA sing N N 258 PHE C O doub N N 259 PHE C OXT sing N N 260 PHE CB CG sing N N 261 PHE CB HB2 sing N N 262 PHE CB HB3 sing N N 263 PHE CG CD1 doub Y N 264 PHE CG CD2 sing Y N 265 PHE CD1 CE1 sing Y N 266 PHE CD1 HD1 sing N N 267 PHE CD2 CE2 doub Y N 268 PHE CD2 HD2 sing N N 269 PHE CE1 CZ doub Y N 270 PHE CE1 HE1 sing N N 271 PHE CE2 CZ sing Y N 272 PHE CE2 HE2 sing N N 273 PHE CZ HZ sing N N 274 PHE OXT HXT sing N N 275 PRO N CA sing N N 276 PRO N CD sing N N 277 PRO N H sing N N 278 PRO CA C sing N N 279 PRO CA CB sing N N 280 PRO CA HA sing N N 281 PRO C O doub N N 282 PRO C OXT sing N N 283 PRO CB CG sing N N 284 PRO CB HB2 sing N N 285 PRO CB HB3 sing N N 286 PRO CG CD sing N N 287 PRO CG HG2 sing N N 288 PRO CG HG3 sing N N 289 PRO CD HD2 sing N N 290 PRO CD HD3 sing N N 291 PRO OXT HXT sing N N 292 SER N CA sing N N 293 SER N H sing N N 294 SER N H2 sing N N 295 SER CA C sing N N 296 SER CA CB sing N N 297 SER CA HA sing N N 298 SER C O doub N N 299 SER C OXT sing N N 300 SER CB OG sing N N 301 SER CB HB2 sing N N 302 SER CB HB3 sing N N 303 SER OG HG sing N N 304 SER OXT HXT sing N N 305 SO4 S O1 doub N N 306 SO4 S O2 doub N N 307 SO4 S O3 sing N N 308 SO4 S O4 sing N N 309 THR N CA sing N N 310 THR N H sing N N 311 THR N H2 sing N N 312 THR CA C sing N N 313 THR CA CB sing N N 314 THR CA HA sing N N 315 THR C O doub N N 316 THR C OXT sing N N 317 THR CB OG1 sing N N 318 THR CB CG2 sing N N 319 THR CB HB sing N N 320 THR OG1 HG1 sing N N 321 THR CG2 HG21 sing N N 322 THR CG2 HG22 sing N N 323 THR CG2 HG23 sing N N 324 THR OXT HXT sing N N 325 TRP N CA sing N N 326 TRP N H sing N N 327 TRP N H2 sing N N 328 TRP CA C sing N N 329 TRP CA CB sing N N 330 TRP CA HA sing N N 331 TRP C O doub N N 332 TRP C OXT sing N N 333 TRP CB CG sing N N 334 TRP CB HB2 sing N N 335 TRP CB HB3 sing N N 336 TRP CG CD1 doub Y N 337 TRP CG CD2 sing Y N 338 TRP CD1 NE1 sing Y N 339 TRP CD1 HD1 sing N N 340 TRP CD2 CE2 doub Y N 341 TRP CD2 CE3 sing Y N 342 TRP NE1 CE2 sing Y N 343 TRP NE1 HE1 sing N N 344 TRP CE2 CZ2 sing Y N 345 TRP CE3 CZ3 doub Y N 346 TRP CE3 HE3 sing N N 347 TRP CZ2 CH2 doub Y N 348 TRP CZ2 HZ2 sing N N 349 TRP CZ3 CH2 sing Y N 350 TRP CZ3 HZ3 sing N N 351 TRP CH2 HH2 sing N N 352 TRP OXT HXT sing N N 353 TYR N CA sing N N 354 TYR N H sing N N 355 TYR N H2 sing N N 356 TYR CA C sing N N 357 TYR CA CB sing N N 358 TYR CA HA sing N N 359 TYR C O doub N N 360 TYR C OXT sing N N 361 TYR CB CG sing N N 362 TYR CB HB2 sing N N 363 TYR CB HB3 sing N N 364 TYR CG CD1 doub Y N 365 TYR CG CD2 sing Y N 366 TYR CD1 CE1 sing Y N 367 TYR CD1 HD1 sing N N 368 TYR CD2 CE2 doub Y N 369 TYR CD2 HD2 sing N N 370 TYR CE1 CZ doub Y N 371 TYR CE1 HE1 sing N N 372 TYR CE2 CZ sing Y N 373 TYR CE2 HE2 sing N N 374 TYR CZ OH sing N N 375 TYR OH HH sing N N 376 TYR OXT HXT sing N N 377 VAL N CA sing N N 378 VAL N H sing N N 379 VAL N H2 sing N N 380 VAL CA C sing N N 381 VAL CA CB sing N N 382 VAL CA HA sing N N 383 VAL C O doub N N 384 VAL C OXT sing N N 385 VAL CB CG1 sing N N 386 VAL CB CG2 sing N N 387 VAL CB HB sing N N 388 VAL CG1 HG11 sing N N 389 VAL CG1 HG12 sing N N 390 VAL CG1 HG13 sing N N 391 VAL CG2 HG21 sing N N 392 VAL CG2 HG22 sing N N 393 VAL CG2 HG23 sing N N 394 VAL OXT HXT sing N N 395 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'SULFATE ION' SO4 3 ADENINE ADE 4 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1IFT _pdbx_initial_refinement_model.details 'PDB ENTRY 1IFT' #