HEADER HYDROLASE/DNA 12-MAR-99 2PJR TITLE HELICASE PRODUCT COMPLEX COMPND MOL_ID: 1; COMPND 2 MOLECULE: DNA (5'-D(*TP*TP*TP*TP*T)-3'); COMPND 3 CHAIN: C, D; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: DNA (5'-D(*GP*C)-3'); COMPND 7 CHAIN: H; COMPND 8 ENGINEERED: YES; COMPND 9 MOL_ID: 3; COMPND 10 MOLECULE: DNA (5'-D(*AP*CP*TP*GP*C)-3'); COMPND 11 CHAIN: I; COMPND 12 ENGINEERED: YES; COMPND 13 MOL_ID: 4; COMPND 14 MOLECULE: PROTEIN (HELICASE PCRA); COMPND 15 CHAIN: A, F; COMPND 16 FRAGMENT: RESIDUES 1-548; COMPND 17 SYNONYM: ATP-DEPENDENT HELICASE PCRA; COMPND 18 EC: 3.6.1.-; COMPND 19 ENGINEERED: YES; COMPND 20 MOL_ID: 5; COMPND 21 MOLECULE: PROTEIN (HELICASE PCRA); COMPND 22 CHAIN: B, G; COMPND 23 FRAGMENT: RESIDUES 556-650; COMPND 24 SYNONYM: ATP-DEPENDENT HELICASE PCRA; COMPND 25 EC: 3.6.1.-; COMPND 26 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 SYNTHETIC: YES; SOURCE 3 MOL_ID: 2; SOURCE 4 SYNTHETIC: YES; SOURCE 5 MOL_ID: 3; SOURCE 6 SYNTHETIC: YES; SOURCE 7 MOL_ID: 4; SOURCE 8 ORGANISM_SCIENTIFIC: GEOBACILLUS STEAROTHERMOPHILUS; SOURCE 9 ORGANISM_TAXID: 1422; SOURCE 10 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 11 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 12 MOL_ID: 5; SOURCE 13 ORGANISM_SCIENTIFIC: GEOBACILLUS STEAROTHERMOPHILUS; SOURCE 14 ORGANISM_TAXID: 1422; SOURCE 15 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 16 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS HELICASE PCRA, HYDROLASE, DNA, PRODUCT COMPLEX, HYDROLASE-DNA COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR S.S.VELANKAR,P.SOULTANAS,M.S.DILLINGHAM,H.S.SUBRAMANYA,D.B.WIGLEY REVDAT 8 27-DEC-23 2PJR 1 REMARK REVDAT 7 24-FEB-09 2PJR 1 VERSN REVDAT 6 01-APR-03 2PJR 1 JRNL REVDAT 5 19-JUN-00 2PJR 1 SEQRES COMPND DBREF REMARK REVDAT 4 30-MAY-00 2PJR 1 HELIX REVDAT 3 10-APR-00 2PJR 1 COMPND HEADER REVDAT 2 14-FEB-00 2PJR 1 ATOM CRYST1 REVDAT 1 08-APR-99 2PJR 0 JRNL AUTH S.S.VELANKAR,P.SOULTANAS,M.S.DILLINGHAM,H.S.SUBRAMANYA, JRNL AUTH 2 D.B.WIGLEY JRNL TITL CRYSTAL STRUCTURES OF COMPLEXES OF PCRA DNA HELICASE WITH A JRNL TITL 2 DNA SUBSTRATE INDICATE AN INCHWORM MECHANISM. JRNL REF CELL(CAMBRIDGE,MASS.) V. 97 75 1999 JRNL REFN ISSN 0092-8674 JRNL PMID 10199404 JRNL DOI 10.1016/S0092-8674(00)80716-3 REMARK 2 REMARK 2 RESOLUTION. 2.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 15.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 97.9 REMARK 3 NUMBER OF REFLECTIONS : 31850 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : NULL REMARK 3 R VALUE (WORKING SET) : 0.240 REMARK 3 FREE R VALUE : 0.296 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1609 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.007 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : NULL REMARK 3 BIN RESOLUTION RANGE LOW (A) : NULL REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : NULL REMARK 3 BIN FREE R VALUE : NULL REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 10331 REMARK 3 NUCLEIC ACID ATOMS : 330 REMARK 3 HETEROGEN ATOMS : 10 REMARK 3 SOLVENT ATOMS : 0 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM C-V SIGMAA (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.011 REMARK 3 BOND ANGLES (DEGREES) : 1.700 REMARK 3 DIHEDRAL ANGLES (DEGREES) : NULL REMARK 3 IMPROPER ANGLES (DEGREES) : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : NULL REMARK 3 KSOL : NULL REMARK 3 BSOL : NULL REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2PJR COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 16-MAR-99. REMARK 100 THE DEPOSITION ID IS D_1000000648. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : EMBL/DESY, HAMBURG REMARK 200 BEAMLINE : X11 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.900 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : NULL REMARK 200 DETECTOR MANUFACTURER : NULL REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : NULL REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 31850 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.900 REMARK 200 RESOLUTION RANGE LOW (A) : 10.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.9 REMARK 200 DATA REDUNDANCY : 2.000 REMARK 200 R MERGE (I) : 0.06800 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 49.80 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.45 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PH 8.5 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 31.30000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: OCTAMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, D, H, I, A, B, F, G REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 ASN A 2 REMARK 465 PHE A 3 REMARK 465 LEU A 4 REMARK 465 SER A 5 REMARK 465 GLU A 6 REMARK 465 MET F 701 REMARK 465 ASN F 702 REMARK 465 PHE F 703 REMARK 465 ASP F 1248 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O PHE B 585 N HIS B 587 1.97 REMARK 500 O PHE G 1277 N HIS G 1279 2.08 REMARK 500 O LEU F 1238 N LEU F 1240 2.13 REMARK 500 O ALA F 1157 N ALA F 1160 2.14 REMARK 500 O PHE F 861 O ARG F 864 2.15 REMARK 500 O ALA F 1144 N GLU F 1147 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 DT I 32 O3' DG I 33 P -0.128 REMARK 500 SER B 650 CA SER B 650 CB 0.108 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 DT D 17 O4' - C4' - C3' ANGL. DEV. = -2.9 DEGREES REMARK 500 DA I 30 O5' - C5' - C4' ANGL. DEV. = 17.9 DEGREES REMARK 500 DA I 30 C5' - C4' - O4' ANGL. DEV. = 8.9 DEGREES REMARK 500 DC I 34 O3' - P - OP2 ANGL. DEV. = 9.3 DEGREES REMARK 500 DC I 34 O5' - C5' - C4' ANGL. DEV. = -6.9 DEGREES REMARK 500 PRO A 207 C - N - CA ANGL. DEV. = 10.6 DEGREES REMARK 500 PRO A 418 C - N - CA ANGL. DEV. = -16.1 DEGREES REMARK 500 PRO A 418 C - N - CD ANGL. DEV. = 13.4 DEGREES REMARK 500 ASP A 548 CB - CG - OD1 ANGL. DEV. = 5.4 DEGREES REMARK 500 PRO B 586 C - N - CA ANGL. DEV. = -9.7 DEGREES REMARK 500 PRO F 907 C - N - CA ANGL. DEV. = 9.4 DEGREES REMARK 500 PRO F1118 C - N - CA ANGL. DEV. = -12.1 DEGREES REMARK 500 PRO F1118 C - N - CD ANGL. DEV. = 13.8 DEGREES REMARK 500 ILE F1151 N - CA - C ANGL. DEV. = -17.0 DEGREES REMARK 500 LYS F1190 N - CA - C ANGL. DEV. = -16.5 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU A 8 -75.46 58.77 REMARK 500 ALA A 10 41.91 -68.33 REMARK 500 HIS A 11 -40.22 -171.94 REMARK 500 THR A 63 -169.48 -123.59 REMARK 500 LEU A 79 -60.24 -102.49 REMARK 500 ARG A 101 1.25 -63.80 REMARK 500 LYS A 132 -72.90 -155.92 REMARK 500 ILE A 134 90.51 -51.95 REMARK 500 PRO A 136 -161.48 -73.64 REMARK 500 LYS A 137 82.55 53.32 REMARK 500 LYS A 138 -145.02 58.72 REMARK 500 PHE A 139 35.86 22.82 REMARK 500 LYS A 163 12.94 -66.55 REMARK 500 THR A 167 125.15 25.03 REMARK 500 TYR A 168 165.32 38.66 REMARK 500 TYR A 169 -73.35 61.04 REMARK 500 HIS A 188 60.04 39.37 REMARK 500 LEU A 195 -9.29 -48.36 REMARK 500 ASP A 253 3.24 -68.34 REMARK 500 ILE A 256 25.88 -144.46 REMARK 500 GLN A 265 21.47 -79.77 REMARK 500 ASN A 276 46.54 -101.64 REMARK 500 ARG A 287 -70.53 -89.02 REMARK 500 LYS A 309 110.85 -177.08 REMARK 500 PRO A 316 176.09 -54.79 REMARK 500 ILE A 321 107.05 -59.99 REMARK 500 GLU A 342 -85.63 -60.28 REMARK 500 ALA A 343 -5.78 -53.52 REMARK 500 ARG A 346 -84.83 -104.63 REMARK 500 GLU A 348 115.68 130.47 REMARK 500 ARG A 349 91.72 90.24 REMARK 500 ARG A 350 -149.22 -66.33 REMARK 500 ASP A 353 2.15 -65.37 REMARK 500 ALA A 362 6.71 -68.45 REMARK 500 ARG A 365 -73.06 -45.46 REMARK 500 ALA A 374 -76.92 -65.45 REMARK 500 ASN A 375 55.56 147.48 REMARK 500 LEU A 384 70.36 -179.50 REMARK 500 ASN A 404 72.99 -150.34 REMARK 500 PRO A 405 -13.13 -48.59 REMARK 500 ASN A 416 20.51 -145.26 REMARK 500 VAL A 417 -76.79 -62.21 REMARK 500 ALA A 424 -57.76 -13.12 REMARK 500 TYR A 433 6.84 -67.42 REMARK 500 GLU A 447 42.56 -81.29 REMARK 500 MET A 450 12.94 -159.94 REMARK 500 LEU A 453 -97.76 51.38 REMARK 500 ALA A 455 -69.77 61.15 REMARK 500 ASP A 489 -76.33 -88.03 REMARK 500 GLU A 523 43.03 -79.11 REMARK 500 REMARK 500 THIS ENTRY HAS 126 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 DC I 34 0.08 SIDE CHAIN REMARK 500 TYR A 387 0.07 SIDE CHAIN REMARK 500 TYR F1193 0.08 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 F 1249 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 901 DBREF 2PJR A 1 548 UNP P56255 PCRA_BACST 1 548 DBREF 2PJR B 556 650 UNP P56255 PCRA_BACST 556 650 DBREF 2PJR F 701 1248 UNP P56255 PCRA_BACST 1 548 DBREF 2PJR G 1248 1342 UNP P56255 PCRA_BACST 556 650 DBREF 2PJR C 13 17 PDB 2PJR 2PJR 13 17 DBREF 2PJR D 13 17 PDB 2PJR 2PJR 13 17 DBREF 2PJR H 1 2 PDB 2PJR 2PJR 1 2 DBREF 2PJR I 30 34 PDB 2PJR 2PJR 30 34 SEQRES 1 C 5 DT DT DT DT DT SEQRES 1 D 5 DT DT DT DT DT SEQRES 1 H 2 DG DC SEQRES 1 I 5 DA DC DT DG DC SEQRES 1 A 548 MET ASN PHE LEU SER GLU GLN LEU LEU ALA HIS LEU ASN SEQRES 2 A 548 LYS GLU GLN GLN GLU ALA VAL ARG THR THR GLU GLY PRO SEQRES 3 A 548 LEU LEU ILE MET ALA GLY ALA GLY SER GLY LYS THR ARG SEQRES 4 A 548 VAL LEU THR HIS ARG ILE ALA TYR LEU MET ALA GLU LYS SEQRES 5 A 548 HIS VAL ALA PRO TRP ASN ILE LEU ALA ILE THR PHE THR SEQRES 6 A 548 ASN LYS ALA ALA ARG GLU MET ARG GLU ARG VAL GLN SER SEQRES 7 A 548 LEU LEU GLY GLY ALA ALA GLU ASP VAL TRP ILE SER THR SEQRES 8 A 548 PHE HIS SER MET CYS VAL ARG ILE LEU ARG ARG ASP ILE SEQRES 9 A 548 ASP ARG ILE GLY ILE ASN ARG ASN PHE SER ILE LEU ASP SEQRES 10 A 548 PRO THR ASP GLN LEU SER VAL MET LYS THR ILE LEU LYS SEQRES 11 A 548 GLU LYS ASN ILE ASP PRO LYS LYS PHE GLU PRO ARG THR SEQRES 12 A 548 ILE LEU GLY THR ILE SER ALA ALA LYS ASN GLU LEU LEU SEQRES 13 A 548 PRO PRO GLU GLN PHE ALA LYS ARG ALA SER THR TYR TYR SEQRES 14 A 548 GLU LYS VAL VAL SER ASP VAL TYR GLN GLU TYR GLN GLN SEQRES 15 A 548 ARG LEU LEU ARG ASN HIS SER LEU ASP PHE ASP ASP LEU SEQRES 16 A 548 ILE MET THR THR ILE GLN LEU PHE ASP ARG VAL PRO ASP SEQRES 17 A 548 VAL LEU HIS TYR TYR GLN TYR LYS PHE GLN TYR ILE HIS SEQRES 18 A 548 ILE ASP GLU TYR GLN ASP THR ASN ARG ALA GLN TYR THR SEQRES 19 A 548 LEU VAL LYS LYS LEU ALA GLU ARG PHE GLN ASN ILE CYS SEQRES 20 A 548 ALA VAL GLY ASP ALA ASP GLN SER ILE TYR ARG TRP ARG SEQRES 21 A 548 GLY ALA ASP ILE GLN ASN ILE LEU SER PHE GLU ARG ASP SEQRES 22 A 548 TYR PRO ASN ALA LYS VAL ILE LEU LEU GLU GLN ASN TYR SEQRES 23 A 548 ARG SER THR LYS ARG ILE LEU GLN ALA ALA ASN GLU VAL SEQRES 24 A 548 ILE GLU HIS ASN VAL ASN ARG LYS PRO LYS ARG ILE TRP SEQRES 25 A 548 THR GLU ASN PRO GLU GLY LYS PRO ILE LEU TYR TYR GLU SEQRES 26 A 548 ALA MET ASN GLU ALA ASP GLU ALA GLN PHE VAL ALA GLY SEQRES 27 A 548 ARG ILE ARG GLU ALA VAL GLU ARG GLY GLU ARG ARG TYR SEQRES 28 A 548 ARG ASP PHE ALA VAL LEU TYR ARG THR ASN ALA GLN SER SEQRES 29 A 548 ARG VAL MET GLU GLU MET LEU LEU LYS ALA ASN ILE PRO SEQRES 30 A 548 TYR GLN ILE VAL GLY GLY LEU LYS PHE TYR ASP ARG LYS SEQRES 31 A 548 GLU ILE LYS ASP ILE LEU ALA TYR LEU ARG VAL ILE ALA SEQRES 32 A 548 ASN PRO ASP ASP ASP LEU SER LEU LEU ARG ILE ILE ASN SEQRES 33 A 548 VAL PRO LYS ARG GLY ILE GLY ALA SER THR ILE ASP LYS SEQRES 34 A 548 LEU VAL ARG TYR ALA ALA ASP HIS GLU LEU SER LEU PHE SEQRES 35 A 548 GLU ALA LEU GLY GLU LEU GLU MET ILE GLY LEU GLY ALA SEQRES 36 A 548 LYS ALA ALA GLY ALA LEU ALA ALA PHE ARG SER GLN LEU SEQRES 37 A 548 GLU GLN TRP THR GLN LEU GLN GLU TYR VAL SER VAL THR SEQRES 38 A 548 GLU LEU VAL GLU GLU VAL LEU ASP LYS SER GLY TYR ARG SEQRES 39 A 548 GLU MET LEU LYS ALA GLU ARG THR ILE GLU ALA GLN SER SEQRES 40 A 548 ARG LEU GLU ASN LEU ASP GLU PHE LEU SER VAL THR LYS SEQRES 41 A 548 HIS PHE GLU ASN VAL SER ASP ASP LYS SER LEU ILE ALA SEQRES 42 A 548 PHE LEU THR ASP LEU ALA LEU ILE SER ASP LEU ASP GLU SEQRES 43 A 548 LEU ASP SEQRES 1 B 95 GLY ASP ALA VAL MET LEU MET THR LEU HIS ALA ALA LYS SEQRES 2 B 95 GLY LEU GLU PHE PRO VAL VAL PHE LEU ILE GLY MET GLU SEQRES 3 B 95 GLU GLY ILE PHE PRO HIS ASN ARG SER LEU GLU ASP ASP SEQRES 4 B 95 ASP GLU MET GLU GLU GLU ARG ARG LEU ALA TYR VAL GLY SEQRES 5 B 95 ILE THR ARG ALA GLU GLU GLU LEU VAL LEU THR SER ALA SEQRES 6 B 95 GLN MET ARG THR LEU PHE GLY ASN ILE GLN MET ASP PRO SEQRES 7 B 95 PRO SER ARG PHE LEU ASN GLU ILE PRO ALA HIS LEU LEU SEQRES 8 B 95 GLU THR ALA SER SEQRES 1 F 548 MET ASN PHE LEU SER GLU GLN LEU LEU ALA HIS LEU ASN SEQRES 2 F 548 LYS GLU GLN GLN GLU ALA VAL ARG THR THR GLU GLY PRO SEQRES 3 F 548 LEU LEU ILE MET ALA GLY ALA GLY SER GLY LYS THR ARG SEQRES 4 F 548 VAL LEU THR HIS ARG ILE ALA TYR LEU MET ALA GLU LYS SEQRES 5 F 548 HIS VAL ALA PRO TRP ASN ILE LEU ALA ILE THR PHE THR SEQRES 6 F 548 ASN LYS ALA ALA ARG GLU MET ARG GLU ARG VAL GLN SER SEQRES 7 F 548 LEU LEU GLY GLY ALA ALA GLU ASP VAL TRP ILE SER THR SEQRES 8 F 548 PHE HIS SER MET CYS VAL ARG ILE LEU ARG ARG ASP ILE SEQRES 9 F 548 ASP ARG ILE GLY ILE ASN ARG ASN PHE SER ILE LEU ASP SEQRES 10 F 548 PRO THR ASP GLN LEU SER VAL MET LYS THR ILE LEU LYS SEQRES 11 F 548 GLU LYS ASN ILE ASP PRO LYS LYS PHE GLU PRO ARG THR SEQRES 12 F 548 ILE LEU GLY THR ILE SER ALA ALA LYS ASN GLU LEU LEU SEQRES 13 F 548 PRO PRO GLU GLN PHE ALA LYS ARG ALA SER THR TYR TYR SEQRES 14 F 548 GLU LYS VAL VAL SER ASP VAL TYR GLN GLU TYR GLN GLN SEQRES 15 F 548 ARG LEU LEU ARG ASN HIS SER LEU ASP PHE ASP ASP LEU SEQRES 16 F 548 ILE MET THR THR ILE GLN LEU PHE ASP ARG VAL PRO ASP SEQRES 17 F 548 VAL LEU HIS TYR TYR GLN TYR LYS PHE GLN TYR ILE HIS SEQRES 18 F 548 ILE ASP GLU TYR GLN ASP THR ASN ARG ALA GLN TYR THR SEQRES 19 F 548 LEU VAL LYS LYS LEU ALA GLU ARG PHE GLN ASN ILE CYS SEQRES 20 F 548 ALA VAL GLY ASP ALA ASP GLN SER ILE TYR ARG TRP ARG SEQRES 21 F 548 GLY ALA ASP ILE GLN ASN ILE LEU SER PHE GLU ARG ASP SEQRES 22 F 548 TYR PRO ASN ALA LYS VAL ILE LEU LEU GLU GLN ASN TYR SEQRES 23 F 548 ARG SER THR LYS ARG ILE LEU GLN ALA ALA ASN GLU VAL SEQRES 24 F 548 ILE GLU HIS ASN VAL ASN ARG LYS PRO LYS ARG ILE TRP SEQRES 25 F 548 THR GLU ASN PRO GLU GLY LYS PRO ILE LEU TYR TYR GLU SEQRES 26 F 548 ALA MET ASN GLU ALA ASP GLU ALA GLN PHE VAL ALA GLY SEQRES 27 F 548 ARG ILE ARG GLU ALA VAL GLU ARG GLY GLU ARG ARG TYR SEQRES 28 F 548 ARG ASP PHE ALA VAL LEU TYR ARG THR ASN ALA GLN SER SEQRES 29 F 548 ARG VAL MET GLU GLU MET LEU LEU LYS ALA ASN ILE PRO SEQRES 30 F 548 TYR GLN ILE VAL GLY GLY LEU LYS PHE TYR ASP ARG LYS SEQRES 31 F 548 GLU ILE LYS ASP ILE LEU ALA TYR LEU ARG VAL ILE ALA SEQRES 32 F 548 ASN PRO ASP ASP ASP LEU SER LEU LEU ARG ILE ILE ASN SEQRES 33 F 548 VAL PRO LYS ARG GLY ILE GLY ALA SER THR ILE ASP LYS SEQRES 34 F 548 LEU VAL ARG TYR ALA ALA ASP HIS GLU LEU SER LEU PHE SEQRES 35 F 548 GLU ALA LEU GLY GLU LEU GLU MET ILE GLY LEU GLY ALA SEQRES 36 F 548 LYS ALA ALA GLY ALA LEU ALA ALA PHE ARG SER GLN LEU SEQRES 37 F 548 GLU GLN TRP THR GLN LEU GLN GLU TYR VAL SER VAL THR SEQRES 38 F 548 GLU LEU VAL GLU GLU VAL LEU ASP LYS SER GLY TYR ARG SEQRES 39 F 548 GLU MET LEU LYS ALA GLU ARG THR ILE GLU ALA GLN SER SEQRES 40 F 548 ARG LEU GLU ASN LEU ASP GLU PHE LEU SER VAL THR LYS SEQRES 41 F 548 HIS PHE GLU ASN VAL SER ASP ASP LYS SER LEU ILE ALA SEQRES 42 F 548 PHE LEU THR ASP LEU ALA LEU ILE SER ASP LEU ASP GLU SEQRES 43 F 548 LEU ASP SEQRES 1 G 95 GLY ASP ALA VAL MET LEU MET THR LEU HIS ALA ALA LYS SEQRES 2 G 95 GLY LEU GLU PHE PRO VAL VAL PHE LEU ILE GLY MET GLU SEQRES 3 G 95 GLU GLY ILE PHE PRO HIS ASN ARG SER LEU GLU ASP ASP SEQRES 4 G 95 ASP GLU MET GLU GLU GLU ARG ARG LEU ALA TYR VAL GLY SEQRES 5 G 95 ILE THR ARG ALA GLU GLU GLU LEU VAL LEU THR SER ALA SEQRES 6 G 95 GLN MET ARG THR LEU PHE GLY ASN ILE GLN MET ASP PRO SEQRES 7 G 95 PRO SER ARG PHE LEU ASN GLU ILE PRO ALA HIS LEU LEU SEQRES 8 G 95 GLU THR ALA SER HET SO4 A 901 5 HET SO4 F1249 5 HETNAM SO4 SULFATE ION FORMUL 9 SO4 2(O4 S 2-) HELIX 1 1 ASN A 13 THR A 22 1 10 HELIX 2 2 GLY A 36 GLU A 51 1 16 HELIX 3 3 ALA A 55 TRP A 57 5 3 HELIX 4 4 THR A 65 VAL A 76 1 12 HELIX 5 5 GLY A 82 VAL A 87 5 6 HELIX 6 6 PHE A 92 ILE A 104 1 13 HELIX 7 7 ASP A 105 GLY A 108 5 4 HELIX 8 8 ASP A 117 GLU A 131 1 15 HELIX 9 9 GLU A 140 GLU A 154 1 15 HELIX 10 10 PRO A 157 LYS A 163 1 7 HELIX 11 11 LYS A 171 ASN A 187 1 17 HELIX 12 12 ASP A 193 VAL A 206 1 14 HELIX 13 13 VAL A 206 TYR A 215 1 10 HELIX 14 14 GLU A 224 THR A 228 5 5 HELIX 15 15 ASN A 229 ALA A 240 1 12 HELIX 16 16 ASP A 251 SER A 255 5 5 HELIX 17 17 TYR A 257 GLY A 261 5 5 HELIX 18 18 ASP A 263 LEU A 268 1 6 HELIX 19 19 SER A 269 TYR A 274 1 6 HELIX 20 20 THR A 289 GLU A 301 1 13 HELIX 21 21 ASN A 328 ARG A 341 1 14 HELIX 22 22 ARG A 341 GLY A 347 1 7 HELIX 23 23 THR A 360 GLN A 363 5 4 HELIX 24 24 SER A 364 ASN A 375 1 12 HELIX 25 25 LYS A 385 ASP A 388 5 4 HELIX 26 26 ARG A 389 ASN A 404 1 16 HELIX 27 27 ASP A 407 ILE A 415 1 9 HELIX 28 28 GLY A 423 ASP A 436 1 14 HELIX 29 29 SER A 440 GLU A 447 1 8 HELIX 30 30 ALA A 455 GLN A 475 1 21 HELIX 31 31 SER A 479 SER A 491 1 13 HELIX 32 32 GLY A 492 ARG A 501 1 10 HELIX 33 33 THR A 502 GLU A 523 1 22 HELIX 34 34 SER A 530 ALA A 539 1 10 HELIX 35 35 ASN B 588 LEU B 591 5 4 HELIX 36 36 ASP B 593 THR B 609 1 17 HELIX 37 37 SER B 635 ILE B 641 5 7 HELIX 38 38 PRO B 642 HIS B 644 5 3 HELIX 39 39 ASN F 713 THR F 722 1 10 HELIX 40 40 GLY F 736 ARG F 744 1 9 HELIX 41 41 ARG F 744 MET F 749 1 6 HELIX 42 42 ALA F 755 TRP F 757 5 3 HELIX 43 43 THR F 765 ARG F 770 1 6 HELIX 44 44 ARG F 770 GLN F 777 1 8 HELIX 45 45 PHE F 792 ILE F 804 1 13 HELIX 46 46 ASP F 805 GLY F 808 5 4 HELIX 47 47 ASP F 817 LYS F 830 1 14 HELIX 48 48 GLU F 840 ASN F 853 1 14 HELIX 49 49 PRO F 857 ARG F 864 1 8 HELIX 50 50 TYR F 868 ASN F 887 1 20 HELIX 51 51 ASP F 891 VAL F 906 1 16 HELIX 52 52 VAL F 906 PHE F 917 1 12 HELIX 53 53 GLU F 924 THR F 928 5 5 HELIX 54 54 ASN F 929 ALA F 940 1 12 HELIX 55 55 ASP F 951 SER F 955 5 5 HELIX 56 56 ILE F 964 SER F 969 1 6 HELIX 57 57 SER F 969 TYR F 974 1 6 HELIX 58 58 THR F 989 GLU F 1001 1 13 HELIX 59 59 ASN F 1028 GLU F 1045 1 18 HELIX 60 60 ARG F 1050 ARG F 1052 5 3 HELIX 61 61 THR F 1060 GLN F 1063 5 4 HELIX 62 62 SER F 1064 ALA F 1074 1 11 HELIX 63 63 LYS F 1085 ASP F 1088 5 4 HELIX 64 64 ARG F 1089 ASN F 1104 1 16 HELIX 65 65 ASP F 1107 ILE F 1115 1 9 HELIX 66 66 GLY F 1123 ALA F 1134 1 12 HELIX 67 67 SER F 1140 GLY F 1146 1 7 HELIX 68 68 ALA F 1157 GLN F 1175 1 19 HELIX 69 69 SER F 1179 ASP F 1189 1 11 HELIX 70 70 GLY F 1192 LYS F 1198 1 7 HELIX 71 71 GLU F 1204 GLU F 1223 1 20 HELIX 72 72 SER F 1230 ILE F 1241 1 12 HELIX 73 73 ASN G 1280 GLU G 1284 5 5 HELIX 74 74 MET G 1289 THR G 1301 1 13 HELIX 75 75 PHE G 1329 ILE G 1333 5 5 SHEET 1 A 6 TRP A 88 THR A 91 0 SHEET 2 A 6 ILE A 59 THR A 63 1 O ILE A 59 N TRP A 88 SHEET 3 A 6 TYR A 219 ILE A 222 1 O TYR A 219 N LEU A 60 SHEET 4 A 6 ILE A 246 GLY A 250 1 N CYS A 247 O ILE A 220 SHEET 5 A 6 LEU A 27 ALA A 31 1 N LEU A 27 O ILE A 246 SHEET 6 A 6 LYS A 278 LEU A 282 1 O LYS A 278 N LEU A 28 SHEET 1 B 2 SER A 114 LEU A 116 0 SHEET 2 B 2 SER A 189 ASP A 191 1 O LEU A 190 N LEU A 116 SHEET 1 C 2 GLN A 284 ASN A 285 0 SHEET 2 C 2 TRP A 312 THR A 313 1 O TRP A 312 N ASN A 285 SHEET 1 D 7 TYR A 378 ILE A 380 0 SHEET 2 D 7 VAL B 559 THR B 563 1 O VAL B 559 N GLN A 379 SHEET 3 D 7 PHE A 354 TYR A 358 1 O PHE A 354 N MET B 560 SHEET 4 D 7 PHE B 572 LEU B 577 1 O VAL B 574 N ALA A 355 SHEET 5 D 7 ALA B 611 ALA B 620 1 N GLU B 612 O PHE B 572 SHEET 6 D 7 ILE A 321 ALA A 326 1 O LEU A 322 N LEU B 617 SHEET 7 D 7 LEU B 646 THR B 648 1 N GLU B 647 O ILE A 321 SHEET 1 E 6 TRP F 788 THR F 791 0 SHEET 2 E 6 ILE F 759 THR F 763 1 O ILE F 759 N TRP F 788 SHEET 3 E 6 TYR F 919 ILE F 922 1 O TYR F 919 N LEU F 760 SHEET 4 E 6 ILE F 946 GLY F 950 1 N CYS F 947 O ILE F 920 SHEET 5 E 6 LEU F 727 ALA F 731 1 N LEU F 727 O ILE F 946 SHEET 6 E 6 LYS F 978 LEU F 982 1 O LYS F 978 N LEU F 728 SHEET 1 F 2 SER F 814 ILE F 815 0 SHEET 2 F 2 SER F 889 LEU F 890 1 N LEU F 890 O SER F 814 SHEET 1 G 2 GLN F 984 ASN F 985 0 SHEET 2 G 2 TRP F1012 THR F1013 1 O TRP F1012 N ASN F 985 SHEET 1 H 7 TYR F1078 ILE F1080 0 SHEET 2 H 7 VAL G1251 THR G1255 1 O VAL G1251 N GLN F1079 SHEET 3 H 7 PHE F1054 TYR F1058 1 O PHE F1054 N MET G1252 SHEET 4 H 7 PHE G1264 LEU G1269 1 O VAL G1266 N ALA F1055 SHEET 5 H 7 ALA G1303 ALA G1312 1 N GLU G1304 O PHE G1264 SHEET 6 H 7 ILE F1021 ALA F1026 1 O LEU F1022 N LEU G1309 SHEET 7 H 7 LEU G1338 THR G1340 1 N GLU G1339 O ILE F1021 SITE 1 AC1 7 ALA F 733 GLY F 734 LYS F 737 GLN F 954 SITE 2 AC1 7 ARG F 987 GLY G1261 ARG G1302 SITE 1 AC2 5 ALA A 33 GLY A 34 GLN A 254 ARG A 287 SITE 2 AC2 5 ARG B 610 CRYST1 85.050 62.600 141.830 90.00 95.84 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011758 0.000000 0.001203 0.00000 SCALE2 0.000000 0.015974 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007087 0.00000