HEADER HYDROLASE 16-APR-07 2PJT TITLE CRYSTAL STRUCTURE OF THE CATALYTIC DOMAIN OF MMP-13 COMPLEXED WITH TITLE 2 WAY-344 CAVEAT 2PJT CHIRALITY ERRORS AT RESIDUE A 85 COMPND MOL_ID: 1; COMPND 2 MOLECULE: COLLAGENASE 3; COMPND 3 CHAIN: A, B, C, D; COMPND 4 FRAGMENT: CATALYTIC DOMAIN: RESIDUES 104-268; COMPND 5 SYNONYM: MATRIX METALLOPROTEINASE-13, MMP-13; COMPND 6 EC: 3.4.24.-; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: MMP13; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET21A KEYWDS MMPS, METALLOPROTEASE, HYDROLASE, MMP-13, COLLAGENASE, ZINC CHELATOR, KEYWDS 2 HYDROXAMATE, HYDROPHOBIC S1', P1' GROUP, CALCIUM, COLLAGEN KEYWDS 3 DEGRADATION, DISEASE MUTATION, EXTRACELLULAR MATRIX, GLYCOPROTEIN, KEYWDS 4 METAL-BINDING, POLYMORPHISM, SECRETED, ZYMOGEN EXPDTA X-RAY DIFFRACTION AUTHOR Z.XU,A.HUANG,F.LOVERING,J.I.LEVIN,L.MOSYAK REVDAT 3 30-AUG-23 2PJT 1 REMARK LINK REVDAT 2 24-FEB-09 2PJT 1 VERSN REVDAT 1 22-APR-08 2PJT 0 JRNL AUTH A.HUANG,D.JOSEPH-MCCARTHY,F.LOVERING,L.SUN,W.WANG,W.XU, JRNL AUTH 2 Y.ZHU,J.CUI,Y.ZHANG,J.I.LEVIN JRNL TITL STRUCTURE-BASED DESIGN OF TACE SELECTIVE INHIBITORS: JRNL TITL 2 MANIPULATIONS IN THE S1'-S3' POCKET. JRNL REF BIOORG.MED.CHEM. V. 15 6170 2007 JRNL REFN ISSN 0968-0896 JRNL PMID 17606376 JRNL DOI 10.1016/J.BMC.2007.06.031 REMARK 2 REMARK 2 RESOLUTION. 2.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.1 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 19.95 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 DATA CUTOFF HIGH (ABS(F)) : 1179101.190 REMARK 3 DATA CUTOFF LOW (ABS(F)) : 0.0000 REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 92.5 REMARK 3 NUMBER OF REFLECTIONS : 14875 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.212 REMARK 3 FREE R VALUE : 0.270 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 759 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.010 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 6 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.80 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.97 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 71.10 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 1796 REMARK 3 BIN R VALUE (WORKING SET) : 0.2860 REMARK 3 BIN FREE R VALUE : 0.3230 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 4.90 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 92 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.034 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5154 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 146 REMARK 3 SOLVENT ATOMS : 112 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : -0.50 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 41.90 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 11.44000 REMARK 3 B22 (A**2) : -14.51000 REMARK 3 B33 (A**2) : 3.07000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 23.04000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.33 REMARK 3 ESD FROM SIGMAA (A) : 0.43 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.42 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.47 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.009 REMARK 3 BOND ANGLES (DEGREES) : 1.400 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 28.70 REMARK 3 IMPROPER ANGLES (DEGREES) : 1.680 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : RESTRAINED REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : 0.960 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE (A**2) : 1.550 ; 2.000 REMARK 3 SIDE-CHAIN BOND (A**2) : 1.310 ; 2.000 REMARK 3 SIDE-CHAIN ANGLE (A**2) : 2.060 ; 2.500 REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : FLAT MODEL REMARK 3 KSOL : 0.38 REMARK 3 BSOL : 34.48 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PROTEIN_REP.PARAM REMARK 3 PARAMETER FILE 2 : WATER_REP.PARAM REMARK 3 PARAMETER FILE 3 : ION.PARAM REMARK 3 PARAMETER FILE 4 : 344.PAR REMARK 3 PARAMETER FILE 5 : NULL REMARK 3 TOPOLOGY FILE 1 : PROTEIN.TOP REMARK 3 TOPOLOGY FILE 2 : WATER.TOP REMARK 3 TOPOLOGY FILE 3 : ION.TOP REMARK 3 TOPOLOGY FILE 4 : 344.TOP REMARK 3 TOPOLOGY FILE 5 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2PJT COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 08-MAY-07. REMARK 100 THE DEPOSITION ID IS D_1000042455. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSLS REMARK 200 BEAMLINE : X26C REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.00000 REMARK 200 MONOCHROMATOR : SI(111) CRYSTAL REMARK 200 OPTICS : CRYSTAL LOGIC DIFFRACTOMETER REMARK 200 CONSISTING OF A MINI-KAPPA REMARK 200 GONIOMETER REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 4 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 15836 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.700 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 88.9 REMARK 200 DATA REDUNDANCY : 3.420 REMARK 200 R MERGE (I) : 0.10000 REMARK 200 R SYM (I) : 0.10000 REMARK 200 FOR THE DATA SET : 11.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.70 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.80 REMARK 200 COMPLETENESS FOR SHELL (%) : 54.2 REMARK 200 DATA REDUNDANCY IN SHELL : 2.00 REMARK 200 R MERGE FOR SHELL (I) : 0.40200 REMARK 200 R SYM FOR SHELL (I) : 0.40200 REMARK 200 FOR SHELL : 1.880 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: AMORE REMARK 200 STARTING MODEL: PDB ENTRY 1ZTQ REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 42.67 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.15 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 20% PEG 3350, 0.2M MGCL2, 0.1M HEPES REMARK 280 PH 7.0, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 300K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 67.67600 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 17.89450 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 67.67600 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 17.89450 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3, 4 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 4 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 223 REMARK 465 LYS A 224 REMARK 465 SER A 225 REMARK 465 ARG B 84 REMARK 465 PRO C 83 REMARK 465 ARG C 84 REMARK 465 GLY C 223 REMARK 465 LYS C 224 REMARK 465 SER C 225 REMARK 465 HIS C 226 REMARK 465 ARG D 84 REMARK 465 GLY D 223 REMARK 465 LYS D 224 REMARK 465 SER D 225 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A 84 CZ NH1 NH2 REMARK 470 MET A 228 CB CG SD CE REMARK 470 MET D 228 CB CG SD CE REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OXT PRO A 243 O HOH A 405 2.02 REMARK 500 N THR B 85 O HOH B 408 2.09 REMARK 500 O HOH B 421 O HOH B 432 2.09 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 C PRO A 83 O HOH B 408 2667 0.57 REMARK 500 O HOH A 421 O HOH C 417 3546 0.78 REMARK 500 O PRO A 83 O HOH B 408 2667 1.14 REMARK 500 O PRO A 83 N THR B 85 2667 1.15 REMARK 500 O ARG A 84 C PRO B 83 2667 1.42 REMARK 500 N ARG A 84 O HOH B 408 2667 1.45 REMARK 500 O ARG A 84 O PRO B 83 2667 1.87 REMARK 500 CA PRO A 83 O HOH B 408 2667 1.87 REMARK 500 O PRO A 83 CA THR B 85 2667 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 ARG A 84 CD ARG A 84 NE -0.163 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 PRO A 83 N - CA - C ANGL. DEV. = 21.3 DEGREES REMARK 500 ARG A 84 N - CA - C ANGL. DEV. = 25.2 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PRO A 83 43.88 -96.27 REMARK 500 ARG A 84 -55.63 -122.10 REMARK 500 THR A 85 16.12 121.44 REMARK 500 LYS A 145 -140.76 52.36 REMARK 500 HIS A 147 28.57 -142.53 REMARK 500 SER A 157 -170.92 59.71 REMARK 500 ASN A 169 -121.01 56.75 REMARK 500 SER A 185 -141.04 -118.51 REMARK 500 SER A 202 -18.90 -46.01 REMARK 500 PRO A 211 5.38 -58.39 REMARK 500 PRO A 230 154.99 -49.62 REMARK 500 LEU B 86 100.72 -59.81 REMARK 500 LYS B 145 -134.35 41.73 REMARK 500 PRO B 156 143.56 -39.57 REMARK 500 SER B 157 -142.00 52.69 REMARK 500 PRO B 166 153.72 -36.00 REMARK 500 ASN B 169 -117.56 53.20 REMARK 500 SER B 185 -159.12 -74.40 REMARK 500 PRO B 217 1.24 -62.75 REMARK 500 LYS B 224 96.45 -51.68 REMARK 500 LYS C 145 -126.69 46.77 REMARK 500 SER C 157 -158.31 60.97 REMARK 500 ASN C 169 -101.32 49.71 REMARK 500 PRO C 217 11.36 -66.08 REMARK 500 LEU D 86 -162.99 70.03 REMARK 500 LYS D 145 -133.65 44.06 REMARK 500 SER D 157 -152.77 69.19 REMARK 500 ALA D 161 170.34 178.05 REMARK 500 ASN D 169 -116.72 70.40 REMARK 500 SER D 185 -157.83 -137.87 REMARK 500 ASP D 206 -163.53 -76.41 REMARK 500 PRO D 211 -15.75 -43.01 REMARK 500 MET D 215 20.86 -77.57 REMARK 500 PRO D 217 24.50 -78.58 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 PRO A 83 ARG A 84 -134.77 REMARK 500 ARG A 84 THR A 85 -84.39 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 305 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 137 O REMARK 620 2 ASN A 169 O 171.9 REMARK 620 3 GLY A 171 O 91.3 91.4 REMARK 620 4 ASP A 173 OD1 80.3 92.5 81.6 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 303 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 147 NE2 REMARK 620 2 ASP A 149 OD2 115.5 REMARK 620 3 HIS A 162 NE2 123.7 101.2 REMARK 620 4 HIS A 175 ND1 105.9 97.3 110.3 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 304 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 154 OD1 REMARK 620 2 GLY A 155 O 80.0 REMARK 620 3 SER A 157 O 64.4 83.0 REMARK 620 4 LEU A 159 O 115.3 164.0 107.4 REMARK 620 5 ASP A 177 OD2 115.1 74.0 156.5 94.2 REMARK 620 6 GLU A 180 OE2 145.6 73.8 90.3 93.6 78.7 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 302 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 197 NE2 REMARK 620 2 HIS A 201 NE2 95.3 REMARK 620 3 HIS A 207 NE2 106.6 101.3 REMARK 620 4 347 A 401 O5 112.5 151.1 78.7 REMARK 620 5 347 A 401 O6 105.8 90.3 144.2 75.3 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA B 305 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 137 O REMARK 620 2 GLY B 171 O 88.4 REMARK 620 3 ASP B 173 OD1 87.6 114.8 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B 303 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B 147 NE2 REMARK 620 2 ASP B 149 OD2 110.7 REMARK 620 3 HIS B 162 NE2 127.6 114.5 REMARK 620 4 HIS B 175 ND1 103.9 97.3 95.3 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA B 304 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 154 OD1 REMARK 620 2 GLY B 155 O 78.5 REMARK 620 3 SER B 157 O 73.7 88.1 REMARK 620 4 LEU B 159 O 88.7 154.1 66.6 REMARK 620 5 ASP B 177 OD2 106.2 101.3 170.4 103.8 REMARK 620 6 GLU B 180 OE2 136.5 97.2 62.8 76.7 117.0 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B 302 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B 197 NE2 REMARK 620 2 HIS B 201 NE2 97.3 REMARK 620 3 HIS B 207 NE2 113.9 90.8 REMARK 620 4 347 B 401 O6 106.0 96.4 138.1 REMARK 620 5 347 B 401 O5 104.5 156.8 87.4 70.4 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA C 305 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP C 137 O REMARK 620 2 ASN C 169 O 150.0 REMARK 620 3 GLY C 171 O 97.6 112.1 REMARK 620 4 ASP C 173 OD1 79.3 98.8 100.0 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN C 303 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS C 147 NE2 REMARK 620 2 ASP C 149 OD2 114.5 REMARK 620 3 HIS C 162 NE2 123.8 116.3 REMARK 620 4 HIS C 175 ND1 101.9 96.2 95.2 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA C 304 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP C 154 OD1 REMARK 620 2 GLY C 155 O 73.2 REMARK 620 3 SER C 157 O 71.0 78.0 REMARK 620 4 LEU C 159 O 112.1 159.0 84.5 REMARK 620 5 ASP C 177 OD2 126.6 79.7 145.1 109.6 REMARK 620 6 GLU C 180 OE2 140.5 82.8 73.6 81.1 77.3 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN C 302 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS C 197 NE2 REMARK 620 2 HIS C 201 NE2 108.8 REMARK 620 3 HIS C 207 NE2 103.0 90.3 REMARK 620 4 347 C 401 O5 115.5 135.3 74.7 REMARK 620 5 347 C 401 O6 112.7 94.4 140.2 74.3 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA D 305 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP D 137 O REMARK 620 2 GLY D 171 O 81.5 REMARK 620 3 ASP D 173 OD1 85.2 111.1 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN D 303 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS D 147 NE2 REMARK 620 2 ASP D 149 OD2 104.0 REMARK 620 3 HIS D 162 NE2 108.4 118.2 REMARK 620 4 HIS D 175 ND1 108.5 101.6 115.3 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA D 304 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP D 154 OD1 REMARK 620 2 GLY D 155 O 83.6 REMARK 620 3 SER D 157 O 65.8 84.0 REMARK 620 4 LEU D 159 O 93.9 163.6 80.2 REMARK 620 5 ASP D 177 OD2 104.5 88.7 168.4 107.6 REMARK 620 6 GLU D 180 OE2 146.8 87.3 81.6 86.1 107.2 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN D 302 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS D 197 NE2 REMARK 620 2 HIS D 201 NE2 94.4 REMARK 620 3 347 D 401 O6 95.8 102.2 REMARK 620 4 347 D 401 O5 103.8 161.7 73.9 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN B 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN B 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA B 304 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA B 305 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 304 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 305 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN C 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN C 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA C 304 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA C 305 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN D 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN D 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA D 304 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA D 305 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 347 A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 347 B 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 347 C 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 347 D 401 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1ZTQ RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF THE CATALYTIC DOMAIN OF MMP-13 COMPLEXED WITH REMARK 900 WAY-033 DBREF 2PJT A 79 243 UNP P45452 MMP13_HUMAN 104 268 DBREF 2PJT B 79 243 UNP P45452 MMP13_HUMAN 104 268 DBREF 2PJT C 79 243 UNP P45452 MMP13_HUMAN 104 268 DBREF 2PJT D 79 243 UNP P45452 MMP13_HUMAN 104 268 SEQRES 1 A 165 TYR ASN VAL PHE PRO ARG THR LEU LYS TRP SER LYS MET SEQRES 2 A 165 ASN LEU THR TYR ARG ILE VAL ASN TYR THR PRO ASP MET SEQRES 3 A 165 THR HIS SER GLU VAL GLU LYS ALA PHE LYS LYS ALA PHE SEQRES 4 A 165 LYS VAL TRP SER ASP VAL THR PRO LEU ASN PHE THR ARG SEQRES 5 A 165 LEU HIS ASP GLY ILE ALA ASP ILE MET ILE SER PHE GLY SEQRES 6 A 165 ILE LYS GLU HIS GLY ASP PHE TYR PRO PHE ASP GLY PRO SEQRES 7 A 165 SER GLY LEU LEU ALA HIS ALA PHE PRO PRO GLY PRO ASN SEQRES 8 A 165 TYR GLY GLY ASP ALA HIS PHE ASP ASP ASP GLU THR TRP SEQRES 9 A 165 THR SER SER SER LYS GLY TYR ASN LEU PHE LEU VAL ALA SEQRES 10 A 165 ALA HIS GLU PHE GLY HIS SER LEU GLY LEU ASP HIS SER SEQRES 11 A 165 LYS ASP PRO GLY ALA LEU MET PHE PRO ILE TYR THR TYR SEQRES 12 A 165 THR GLY LYS SER HIS PHE MET LEU PRO ASP ASP ASP VAL SEQRES 13 A 165 GLN GLY ILE GLN SER LEU TYR GLY PRO SEQRES 1 B 165 TYR ASN VAL PHE PRO ARG THR LEU LYS TRP SER LYS MET SEQRES 2 B 165 ASN LEU THR TYR ARG ILE VAL ASN TYR THR PRO ASP MET SEQRES 3 B 165 THR HIS SER GLU VAL GLU LYS ALA PHE LYS LYS ALA PHE SEQRES 4 B 165 LYS VAL TRP SER ASP VAL THR PRO LEU ASN PHE THR ARG SEQRES 5 B 165 LEU HIS ASP GLY ILE ALA ASP ILE MET ILE SER PHE GLY SEQRES 6 B 165 ILE LYS GLU HIS GLY ASP PHE TYR PRO PHE ASP GLY PRO SEQRES 7 B 165 SER GLY LEU LEU ALA HIS ALA PHE PRO PRO GLY PRO ASN SEQRES 8 B 165 TYR GLY GLY ASP ALA HIS PHE ASP ASP ASP GLU THR TRP SEQRES 9 B 165 THR SER SER SER LYS GLY TYR ASN LEU PHE LEU VAL ALA SEQRES 10 B 165 ALA HIS GLU PHE GLY HIS SER LEU GLY LEU ASP HIS SER SEQRES 11 B 165 LYS ASP PRO GLY ALA LEU MET PHE PRO ILE TYR THR TYR SEQRES 12 B 165 THR GLY LYS SER HIS PHE MET LEU PRO ASP ASP ASP VAL SEQRES 13 B 165 GLN GLY ILE GLN SER LEU TYR GLY PRO SEQRES 1 C 165 TYR ASN VAL PHE PRO ARG THR LEU LYS TRP SER LYS MET SEQRES 2 C 165 ASN LEU THR TYR ARG ILE VAL ASN TYR THR PRO ASP MET SEQRES 3 C 165 THR HIS SER GLU VAL GLU LYS ALA PHE LYS LYS ALA PHE SEQRES 4 C 165 LYS VAL TRP SER ASP VAL THR PRO LEU ASN PHE THR ARG SEQRES 5 C 165 LEU HIS ASP GLY ILE ALA ASP ILE MET ILE SER PHE GLY SEQRES 6 C 165 ILE LYS GLU HIS GLY ASP PHE TYR PRO PHE ASP GLY PRO SEQRES 7 C 165 SER GLY LEU LEU ALA HIS ALA PHE PRO PRO GLY PRO ASN SEQRES 8 C 165 TYR GLY GLY ASP ALA HIS PHE ASP ASP ASP GLU THR TRP SEQRES 9 C 165 THR SER SER SER LYS GLY TYR ASN LEU PHE LEU VAL ALA SEQRES 10 C 165 ALA HIS GLU PHE GLY HIS SER LEU GLY LEU ASP HIS SER SEQRES 11 C 165 LYS ASP PRO GLY ALA LEU MET PHE PRO ILE TYR THR TYR SEQRES 12 C 165 THR GLY LYS SER HIS PHE MET LEU PRO ASP ASP ASP VAL SEQRES 13 C 165 GLN GLY ILE GLN SER LEU TYR GLY PRO SEQRES 1 D 165 TYR ASN VAL PHE PRO ARG THR LEU LYS TRP SER LYS MET SEQRES 2 D 165 ASN LEU THR TYR ARG ILE VAL ASN TYR THR PRO ASP MET SEQRES 3 D 165 THR HIS SER GLU VAL GLU LYS ALA PHE LYS LYS ALA PHE SEQRES 4 D 165 LYS VAL TRP SER ASP VAL THR PRO LEU ASN PHE THR ARG SEQRES 5 D 165 LEU HIS ASP GLY ILE ALA ASP ILE MET ILE SER PHE GLY SEQRES 6 D 165 ILE LYS GLU HIS GLY ASP PHE TYR PRO PHE ASP GLY PRO SEQRES 7 D 165 SER GLY LEU LEU ALA HIS ALA PHE PRO PRO GLY PRO ASN SEQRES 8 D 165 TYR GLY GLY ASP ALA HIS PHE ASP ASP ASP GLU THR TRP SEQRES 9 D 165 THR SER SER SER LYS GLY TYR ASN LEU PHE LEU VAL ALA SEQRES 10 D 165 ALA HIS GLU PHE GLY HIS SER LEU GLY LEU ASP HIS SER SEQRES 11 D 165 LYS ASP PRO GLY ALA LEU MET PHE PRO ILE TYR THR TYR SEQRES 12 D 165 THR GLY LYS SER HIS PHE MET LEU PRO ASP ASP ASP VAL SEQRES 13 D 165 GLN GLY ILE GLN SER LEU TYR GLY PRO HET ZN A 302 1 HET ZN A 303 1 HET CA A 304 1 HET CA A 305 1 HET CA A 307 1 HET 347 A 401 32 HET ZN B 302 1 HET ZN B 303 1 HET CA B 304 1 HET CA B 305 1 HET 347 B 401 32 HET ZN C 302 1 HET ZN C 303 1 HET CA C 304 1 HET CA C 305 1 HET CA C 307 1 HET 347 C 401 32 HET ZN D 302 1 HET ZN D 303 1 HET CA D 304 1 HET CA D 305 1 HET 347 D 401 32 HETNAM ZN ZINC ION HETNAM CA CALCIUM ION HETNAM 347 TERT-BUTYL 4-({[4-(BUT-2-YN-1-YLAMINO) HETNAM 2 347 PHENYL]SULFONYL}METHYL)-4-[(HYDROXYAMINO) HETNAM 3 347 CARBONYL]PIPERIDINE-1-CARBOXYLATE FORMUL 5 ZN 8(ZN 2+) FORMUL 7 CA 10(CA 2+) FORMUL 10 347 4(C22 H31 N3 O6 S) FORMUL 27 HOH *112(H2 O) HELIX 1 1 THR A 105 VAL A 123 1 19 HELIX 2 2 LEU A 191 LEU A 203 1 13 HELIX 3 3 PRO A 230 GLY A 242 1 13 HELIX 4 4 THR B 105 ASP B 122 1 18 HELIX 5 5 LEU B 191 GLY B 204 1 14 HELIX 6 6 PRO B 230 TYR B 241 1 12 HELIX 7 7 THR C 105 ASP C 122 1 18 HELIX 8 8 LEU C 191 GLY C 204 1 14 HELIX 9 9 PRO C 230 GLY C 242 1 13 HELIX 10 10 THR D 105 ASP D 122 1 18 HELIX 11 11 LEU D 191 LEU D 203 1 13 HELIX 12 12 PRO D 230 GLY D 242 1 13 SHEET 1 A 5 ASN A 127 ARG A 130 0 SHEET 2 A 5 ASN A 92 ILE A 97 1 N LEU A 93 O ASN A 127 SHEET 3 A 5 ILE A 138 GLY A 143 1 O ILE A 140 N ARG A 96 SHEET 4 A 5 ALA A 174 ASP A 177 1 O PHE A 176 N SER A 141 SHEET 5 A 5 ALA A 161 ALA A 163 -1 N HIS A 162 O HIS A 175 SHEET 1 B 2 TRP A 182 THR A 183 0 SHEET 2 B 2 TYR A 189 ASN A 190 1 O TYR A 189 N THR A 183 SHEET 1 C 2 ASN B 80 VAL B 81 0 SHEET 2 C 2 LEU B 205 ASP B 206 -1 O ASP B 206 N ASN B 80 SHEET 1 D 5 ASN B 127 LEU B 131 0 SHEET 2 D 5 ASN B 92 ILE B 97 1 N LEU B 93 O ASN B 127 SHEET 3 D 5 ILE B 138 GLY B 143 1 O ILE B 138 N THR B 94 SHEET 4 D 5 ALA B 174 ASP B 177 1 O ALA B 174 N MET B 139 SHEET 5 D 5 ALA B 161 ALA B 163 -1 N HIS B 162 O HIS B 175 SHEET 1 E 2 TRP B 182 THR B 183 0 SHEET 2 E 2 TYR B 189 ASN B 190 1 O TYR B 189 N THR B 183 SHEET 1 F 5 ASN C 127 LEU C 131 0 SHEET 2 F 5 ASN C 92 ILE C 97 1 N LEU C 93 O ASN C 127 SHEET 3 F 5 ILE C 138 GLY C 143 1 O ILE C 140 N ARG C 96 SHEET 4 F 5 ALA C 174 ASP C 177 1 O PHE C 176 N SER C 141 SHEET 5 F 5 ALA C 161 ALA C 163 -1 N HIS C 162 O HIS C 175 SHEET 1 G 2 TRP C 182 THR C 183 0 SHEET 2 G 2 TYR C 189 ASN C 190 1 O TYR C 189 N THR C 183 SHEET 1 H 5 ASN D 127 ARG D 130 0 SHEET 2 H 5 ASN D 92 ILE D 97 1 N LEU D 93 O ASN D 127 SHEET 3 H 5 ILE D 138 GLY D 143 1 O ILE D 140 N ARG D 96 SHEET 4 H 5 ALA D 174 ASP D 177 1 O PHE D 176 N GLY D 143 SHEET 5 H 5 ALA D 161 ALA D 163 -1 N HIS D 162 O HIS D 175 SHEET 1 I 2 TRP D 182 THR D 183 0 SHEET 2 I 2 TYR D 189 ASN D 190 1 O TYR D 189 N THR D 183 LINK O ASP A 137 CA CA A 305 1555 1555 2.35 LINK NE2 HIS A 147 ZN ZN A 303 1555 1555 2.07 LINK OD2 ASP A 149 ZN ZN A 303 1555 1555 2.19 LINK OD1 ASP A 154 CA CA A 304 1555 1555 2.42 LINK O GLY A 155 CA CA A 304 1555 1555 2.38 LINK O SER A 157 CA CA A 304 1555 1555 2.22 LINK O LEU A 159 CA CA A 304 1555 1555 2.09 LINK NE2 HIS A 162 ZN ZN A 303 1555 1555 2.24 LINK O ASN A 169 CA CA A 305 1555 1555 2.11 LINK O GLY A 171 CA CA A 305 1555 1555 2.23 LINK OD1 ASP A 173 CA CA A 305 1555 1555 2.60 LINK ND1 HIS A 175 ZN ZN A 303 1555 1555 2.02 LINK OD2 ASP A 177 CA CA A 304 1555 1555 2.50 LINK OE2 GLU A 180 CA CA A 304 1555 1555 2.18 LINK NE2 HIS A 197 ZN ZN A 302 1555 1555 2.10 LINK NE2 HIS A 201 ZN ZN A 302 1555 1555 2.25 LINK NE2 HIS A 207 ZN ZN A 302 1555 1555 2.23 LINK ZN ZN A 302 O5 347 A 401 1555 1555 2.18 LINK ZN ZN A 302 O6 347 A 401 1555 1555 2.27 LINK O ASP B 137 CA CA B 305 1555 1555 2.29 LINK NE2 HIS B 147 ZN ZN B 303 1555 1555 2.11 LINK OD2 ASP B 149 ZN ZN B 303 1555 1555 2.22 LINK OD1 ASP B 154 CA CA B 304 1555 1555 2.52 LINK O GLY B 155 CA CA B 304 1555 1555 2.01 LINK O SER B 157 CA CA B 304 1555 1555 2.44 LINK O LEU B 159 CA CA B 304 1555 1555 2.44 LINK NE2 HIS B 162 ZN ZN B 303 1555 1555 2.18 LINK O GLY B 171 CA CA B 305 1555 1555 2.50 LINK OD1 ASP B 173 CA CA B 305 1555 1555 2.42 LINK ND1 HIS B 175 ZN ZN B 303 1555 1555 2.23 LINK OD2 ASP B 177 CA CA B 304 1555 1555 2.12 LINK OE2 GLU B 180 CA CA B 304 1555 1555 2.40 LINK NE2 HIS B 197 ZN ZN B 302 1555 1555 2.17 LINK NE2 HIS B 201 ZN ZN B 302 1555 1555 2.25 LINK NE2 HIS B 207 ZN ZN B 302 1555 1555 2.03 LINK ZN ZN B 302 O6 347 B 401 1555 1555 2.40 LINK ZN ZN B 302 O5 347 B 401 1555 1555 2.20 LINK O ASP C 137 CA CA C 305 1555 1555 2.28 LINK NE2 HIS C 147 ZN ZN C 303 1555 1555 2.08 LINK OD2 ASP C 149 ZN ZN C 303 1555 1555 2.18 LINK OD1 ASP C 154 CA CA C 304 1555 1555 2.48 LINK O GLY C 155 CA CA C 304 1555 1555 2.53 LINK O SER C 157 CA CA C 304 1555 1555 2.30 LINK O LEU C 159 CA CA C 304 1555 1555 2.14 LINK NE2 HIS C 162 ZN ZN C 303 1555 1555 2.08 LINK O ASN C 169 CA CA C 305 1555 1555 2.53 LINK O GLY C 171 CA CA C 305 1555 1555 2.12 LINK OD1 ASP C 173 CA CA C 305 1555 1555 2.24 LINK ND1 HIS C 175 ZN ZN C 303 1555 1555 2.17 LINK OD2 ASP C 177 CA CA C 304 1555 1555 2.13 LINK OE2 GLU C 180 CA CA C 304 1555 1555 2.42 LINK NE2 HIS C 197 ZN ZN C 302 1555 1555 2.25 LINK NE2 HIS C 201 ZN ZN C 302 1555 1555 2.10 LINK NE2 HIS C 207 ZN ZN C 302 1555 1555 2.21 LINK ZN ZN C 302 O5 347 C 401 1555 1555 2.14 LINK ZN ZN C 302 O6 347 C 401 1555 1555 2.29 LINK O ASP D 137 CA CA D 305 1555 1555 2.56 LINK NE2 HIS D 147 ZN ZN D 303 1555 1555 2.31 LINK OD2 ASP D 149 ZN ZN D 303 1555 1555 2.24 LINK OD1 ASP D 154 CA CA D 304 1555 1555 2.69 LINK O GLY D 155 CA CA D 304 1555 1555 2.40 LINK O SER D 157 CA CA D 304 1555 1555 2.24 LINK O LEU D 159 CA CA D 304 1555 1555 2.17 LINK NE2 HIS D 162 ZN ZN D 303 1555 1555 2.38 LINK O GLY D 171 CA CA D 305 1555 1555 2.29 LINK OD1 ASP D 173 CA CA D 305 1555 1555 2.18 LINK ND1 HIS D 175 ZN ZN D 303 1555 1555 2.01 LINK OD2 ASP D 177 CA CA D 304 1555 1555 2.68 LINK OE2 GLU D 180 CA CA D 304 1555 1555 2.23 LINK NE2 HIS D 197 ZN ZN D 302 1555 1555 2.26 LINK NE2 HIS D 201 ZN ZN D 302 1555 1555 2.18 LINK ZN ZN D 302 O6 347 D 401 1555 1555 2.20 LINK ZN ZN D 302 O5 347 D 401 1555 1555 2.20 SITE 1 AC1 3 HIS B 197 HIS B 201 HIS B 207 SITE 1 AC2 4 HIS B 147 ASP B 149 HIS B 162 HIS B 175 SITE 1 AC3 6 ASP B 154 GLY B 155 SER B 157 LEU B 159 SITE 2 AC3 6 ASP B 177 GLU B 180 SITE 1 AC4 5 ASP B 137 ASN B 169 TYR B 170 GLY B 171 SITE 2 AC4 5 ASP B 173 SITE 1 AC5 3 HIS A 197 HIS A 201 HIS A 207 SITE 1 AC6 4 HIS A 147 ASP A 149 HIS A 162 HIS A 175 SITE 1 AC7 6 ASP A 154 GLY A 155 SER A 157 LEU A 159 SITE 2 AC7 6 ASP A 177 GLU A 180 SITE 1 AC8 4 ASP A 137 ASN A 169 GLY A 171 ASP A 173 SITE 1 AC9 3 HIS C 197 HIS C 201 HIS C 207 SITE 1 BC1 4 HIS C 147 ASP C 149 HIS C 162 HIS C 175 SITE 1 BC2 6 ASP C 154 GLY C 155 SER C 157 LEU C 159 SITE 2 BC2 6 ASP C 177 GLU C 180 SITE 1 BC3 5 ASP C 137 ASN C 169 TYR C 170 GLY C 171 SITE 2 BC3 5 ASP C 173 SITE 1 BC4 3 HIS D 197 HIS D 201 HIS D 207 SITE 1 BC5 4 HIS D 147 ASP D 149 HIS D 162 HIS D 175 SITE 1 BC6 6 ASP D 154 GLY D 155 SER D 157 LEU D 159 SITE 2 BC6 6 ASP D 177 GLU D 180 SITE 1 BC7 5 ASP D 137 ASN D 169 TYR D 170 GLY D 171 SITE 2 BC7 5 ASP D 173 SITE 1 BC8 12 GLY A 158 LEU A 160 ALA A 161 HIS A 197 SITE 2 BC8 12 GLU A 198 HIS A 201 HIS A 207 PRO A 217 SITE 3 BC8 12 TYR A 219 THR A 220 PRO B 168 ASN B 169 SITE 1 BC9 10 LEU B 160 ALA B 161 LEU B 193 HIS B 197 SITE 2 BC9 10 GLU B 198 HIS B 201 HIS B 207 PRO B 217 SITE 3 BC9 10 TYR B 219 THR B 220 SITE 1 CC1 11 LEU C 160 ALA C 161 HIS C 162 HIS C 197 SITE 2 CC1 11 GLU C 198 HIS C 201 HIS C 207 PRO C 217 SITE 3 CC1 11 ILE C 218 TYR C 219 THR C 220 SITE 1 CC2 15 PRO C 168 ASN C 169 GLY D 158 LEU D 159 SITE 2 CC2 15 LEU D 160 ALA D 161 HIS D 162 HIS D 197 SITE 3 CC2 15 GLU D 198 HIS D 201 HIS D 207 PRO D 217 SITE 4 CC2 15 ILE D 218 TYR D 219 THR D 220 CRYST1 135.352 35.789 139.405 90.00 108.94 90.00 C 1 2 1 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007388 0.000000 0.002535 0.00000 SCALE2 0.000000 0.027942 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007584 0.00000