data_2PL3 # _entry.id 2PL3 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.377 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2PL3 pdb_00002pl3 10.2210/pdb2pl3/pdb RCSB RCSB042496 ? ? WWPDB D_1000042496 ? ? # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 2PL3 _pdbx_database_status.recvd_initial_deposition_date 2007-04-19 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry Y _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Karlberg, T.' 1 'Lehtio, L.' 2 'Arrowsmith, C.H.' 3 'Berglund, H.' 4 'Busam, R.D.' 5 'Collins, R.' 6 'Dahlgren, L.G.' 7 'Edwards, A.' 8 'Flodin, S.' 9 'Flores, A.' 10 'Graslund, S.' 11 'Hallberg, B.M.' 12 'Hammarstrom, M.' 13 'Johansson, I.' 14 'Kallas, A.' 15 'Kotenyova, T.' 16 'Moche, M.' 17 'Nordlund, P.' 18 'Nyman, T.' 19 'Persson, C.' 20 'Sagemark, J.' 21 'Stenmark, P.' 22 'Sundstrom, M.' 23 'Thorsell, A.G.' 24 'Van Den Berg, S.' 25 'Weigelt, J.' 26 'Holmberg-Schiavone, L.' 27 'Structural Genomics Consortium (SGC)' 28 # _citation.id primary _citation.title 'Comparative Structural Analysis of Human DEAD-Box RNA Helicases.' _citation.journal_abbrev 'Plos One' _citation.journal_volume 5 _citation.page_first 12791 _citation.page_last 12791 _citation.year 2010 _citation.journal_id_ASTM ? _citation.country US _citation.journal_id_ISSN 1932-6203 _citation.journal_id_CSD ? _citation.book_publisher ? _citation.pdbx_database_id_PubMed 20941364 _citation.pdbx_database_id_DOI 10.1371/journal.pone.0012791 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Schutz, P.' 1 ? primary 'Karlberg, T.' 2 ? primary 'van den Berg, S.' 3 ? primary 'Collins, R.' 4 ? primary 'Lehtio, L.' 5 ? primary 'Hogbom, M.' 6 ? primary 'Holmberg-Schiavone, L.' 7 ? primary 'Tempel, W.' 8 ? primary 'Park, H.W.' 9 ? primary 'Hammarstrom, M.' 10 ? primary 'Moche, M.' 11 ? primary 'Thorsell, A.G.' 12 ? primary 'Schuler, H.' 13 ? # _cell.entry_id 2PL3 _cell.length_a 63.500 _cell.length_b 63.500 _cell.length_c 304.010 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 2PL3 _symmetry.space_group_name_H-M 'P 61 2 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 178 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Probable ATP-dependent RNA helicase DDX10' 26590.709 1 3.6.1.- ? 'DEAD domain' ? 2 non-polymer syn 'MAGNESIUM ION' 24.305 1 ? ? ? ? 3 non-polymer syn "ADENOSINE-5'-DIPHOSPHATE" 427.201 1 ? ? ? ? 4 non-polymer syn ETHANOL 46.068 4 ? ? ? ? 5 water nat water 18.015 66 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'DEAD box protein 10' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;SMQVERESISRLMQNYEKINVNEITRFSDFPLSKKTLKGLQEAQYRLVTEIQKQTIGLALQGKDVLGAAKTGSGKTLAFL VPVLEALYRLQWTSTDGLGVLIISPTRELAYQTFEVLRKVGKNHDFSAGLIIGGKDLKHEAERINNINILVCTPGRLLQH MDETVSFHATDLQMLVLDEADRILDMGFADTMNAVIENLPKKRQTLLFSATQTKSVKDLARLSLKNPEYVWVHEKA ; _entity_poly.pdbx_seq_one_letter_code_can ;SMQVERESISRLMQNYEKINVNEITRFSDFPLSKKTLKGLQEAQYRLVTEIQKQTIGLALQGKDVLGAAKTGSGKTLAFL VPVLEALYRLQWTSTDGLGVLIISPTRELAYQTFEVLRKVGKNHDFSAGLIIGGKDLKHEAERINNINILVCTPGRLLQH MDETVSFHATDLQMLVLDEADRILDMGFADTMNAVIENLPKKRQTLLFSATQTKSVKDLARLSLKNPEYVWVHEKA ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 SER n 1 2 MET n 1 3 GLN n 1 4 VAL n 1 5 GLU n 1 6 ARG n 1 7 GLU n 1 8 SER n 1 9 ILE n 1 10 SER n 1 11 ARG n 1 12 LEU n 1 13 MET n 1 14 GLN n 1 15 ASN n 1 16 TYR n 1 17 GLU n 1 18 LYS n 1 19 ILE n 1 20 ASN n 1 21 VAL n 1 22 ASN n 1 23 GLU n 1 24 ILE n 1 25 THR n 1 26 ARG n 1 27 PHE n 1 28 SER n 1 29 ASP n 1 30 PHE n 1 31 PRO n 1 32 LEU n 1 33 SER n 1 34 LYS n 1 35 LYS n 1 36 THR n 1 37 LEU n 1 38 LYS n 1 39 GLY n 1 40 LEU n 1 41 GLN n 1 42 GLU n 1 43 ALA n 1 44 GLN n 1 45 TYR n 1 46 ARG n 1 47 LEU n 1 48 VAL n 1 49 THR n 1 50 GLU n 1 51 ILE n 1 52 GLN n 1 53 LYS n 1 54 GLN n 1 55 THR n 1 56 ILE n 1 57 GLY n 1 58 LEU n 1 59 ALA n 1 60 LEU n 1 61 GLN n 1 62 GLY n 1 63 LYS n 1 64 ASP n 1 65 VAL n 1 66 LEU n 1 67 GLY n 1 68 ALA n 1 69 ALA n 1 70 LYS n 1 71 THR n 1 72 GLY n 1 73 SER n 1 74 GLY n 1 75 LYS n 1 76 THR n 1 77 LEU n 1 78 ALA n 1 79 PHE n 1 80 LEU n 1 81 VAL n 1 82 PRO n 1 83 VAL n 1 84 LEU n 1 85 GLU n 1 86 ALA n 1 87 LEU n 1 88 TYR n 1 89 ARG n 1 90 LEU n 1 91 GLN n 1 92 TRP n 1 93 THR n 1 94 SER n 1 95 THR n 1 96 ASP n 1 97 GLY n 1 98 LEU n 1 99 GLY n 1 100 VAL n 1 101 LEU n 1 102 ILE n 1 103 ILE n 1 104 SER n 1 105 PRO n 1 106 THR n 1 107 ARG n 1 108 GLU n 1 109 LEU n 1 110 ALA n 1 111 TYR n 1 112 GLN n 1 113 THR n 1 114 PHE n 1 115 GLU n 1 116 VAL n 1 117 LEU n 1 118 ARG n 1 119 LYS n 1 120 VAL n 1 121 GLY n 1 122 LYS n 1 123 ASN n 1 124 HIS n 1 125 ASP n 1 126 PHE n 1 127 SER n 1 128 ALA n 1 129 GLY n 1 130 LEU n 1 131 ILE n 1 132 ILE n 1 133 GLY n 1 134 GLY n 1 135 LYS n 1 136 ASP n 1 137 LEU n 1 138 LYS n 1 139 HIS n 1 140 GLU n 1 141 ALA n 1 142 GLU n 1 143 ARG n 1 144 ILE n 1 145 ASN n 1 146 ASN n 1 147 ILE n 1 148 ASN n 1 149 ILE n 1 150 LEU n 1 151 VAL n 1 152 CYS n 1 153 THR n 1 154 PRO n 1 155 GLY n 1 156 ARG n 1 157 LEU n 1 158 LEU n 1 159 GLN n 1 160 HIS n 1 161 MET n 1 162 ASP n 1 163 GLU n 1 164 THR n 1 165 VAL n 1 166 SER n 1 167 PHE n 1 168 HIS n 1 169 ALA n 1 170 THR n 1 171 ASP n 1 172 LEU n 1 173 GLN n 1 174 MET n 1 175 LEU n 1 176 VAL n 1 177 LEU n 1 178 ASP n 1 179 GLU n 1 180 ALA n 1 181 ASP n 1 182 ARG n 1 183 ILE n 1 184 LEU n 1 185 ASP n 1 186 MET n 1 187 GLY n 1 188 PHE n 1 189 ALA n 1 190 ASP n 1 191 THR n 1 192 MET n 1 193 ASN n 1 194 ALA n 1 195 VAL n 1 196 ILE n 1 197 GLU n 1 198 ASN n 1 199 LEU n 1 200 PRO n 1 201 LYS n 1 202 LYS n 1 203 ARG n 1 204 GLN n 1 205 THR n 1 206 LEU n 1 207 LEU n 1 208 PHE n 1 209 SER n 1 210 ALA n 1 211 THR n 1 212 GLN n 1 213 THR n 1 214 LYS n 1 215 SER n 1 216 VAL n 1 217 LYS n 1 218 ASP n 1 219 LEU n 1 220 ALA n 1 221 ARG n 1 222 LEU n 1 223 SER n 1 224 LEU n 1 225 LYS n 1 226 ASN n 1 227 PRO n 1 228 GLU n 1 229 TYR n 1 230 VAL n 1 231 TRP n 1 232 VAL n 1 233 HIS n 1 234 GLU n 1 235 LYS n 1 236 ALA n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus Homo _entity_src_gen.pdbx_gene_src_gene DDX10 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3) GOLD PRARE2' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type Plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pNIC-BSA4 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code DDX10_HUMAN _struct_ref.pdbx_db_accession Q13206 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;QVERESISRLMQNYEKINVNEITRFSDFPLSKKTLKGLQEAQYRLVTEIQKQTIGLALQGKDVLGAAKTGSGKTLAFLVP VLEALYRLQWTSTDGLGVLIISPTRELAYQTFEVLRKVGKNHDFSAGLIIGGKDLKHEAERINNINILVCTPGRLLQHMD ETVSFHATDLQMLVLDEADRILDMGFADTMNAVIENLPKKRQTLLFSATQTKSVKDLARLSLKNPEYVWVHEKA ; _struct_ref.pdbx_align_begin 47 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 2PL3 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 3 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 236 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q13206 _struct_ref_seq.db_align_beg 47 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 280 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 47 _struct_ref_seq.pdbx_auth_seq_align_end 280 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 2PL3 SER A 1 ? UNP Q13206 ? ? 'cloning artifact' 45 1 1 2PL3 MET A 2 ? UNP Q13206 ? ? 'cloning artifact' 46 2 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ADP non-polymer n "ADENOSINE-5'-DIPHOSPHATE" ? 'C10 H15 N5 O10 P2' 427.201 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 EOH non-polymer . ETHANOL ? 'C2 H6 O' 46.068 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MG non-polymer . 'MAGNESIUM ION' ? 'Mg 2' 24.305 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 2PL3 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 3.33 _exptl_crystal.density_percent_sol 63.02 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.temp 277 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 8.5 _exptl_crystal_grow.pdbx_details '20% Ethanol, 50mM Sodium chloride, 100mM Tris-HCl, pH 8.5, VAPOR DIFFUSION, SITTING DROP, temperature 277K' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type MARRESEARCH _diffrn_detector.pdbx_collection_date 2007-02-22 _diffrn_detector.details 'Multilayer mirror' # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Bent germanium crystal, horizontal focusing' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.04123 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'MAX II BEAMLINE I911-2' _diffrn_source.pdbx_synchrotron_site 'MAX II' _diffrn_source.pdbx_synchrotron_beamline I911-2 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.04123 # _reflns.entry_id 2PL3 _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.d_resolution_high 2.15 _reflns.d_resolution_low 30.0 _reflns.number_all 20889 _reflns.number_obs 20889 _reflns.percent_possible_obs 99.7 _reflns.pdbx_Rmerge_I_obs 0.048 _reflns.pdbx_Rsym_value 0.017 _reflns.pdbx_netI_over_sigmaI 54.1 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 25.4 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 2.15 _reflns_shell.d_res_low 2.30 _reflns_shell.percent_possible_all 100 _reflns_shell.Rmerge_I_obs 0.160 _reflns_shell.pdbx_Rsym_value 0.047 _reflns_shell.meanI_over_sigI_obs 24.5 _reflns_shell.pdbx_redundancy 26.5 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 3719 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 2PL3 _refine.ls_number_reflns_obs 19842 _refine.ls_number_reflns_all 19842 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 29.30 _refine.ls_d_res_high 2.15 _refine.ls_percent_reflns_obs 100.00 _refine.ls_R_factor_obs 0.21156 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.20973 _refine.ls_R_factor_R_free 0.24757 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.0 _refine.ls_number_reflns_R_free 1045 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.931 _refine.correlation_coeff_Fo_to_Fc_free 0.914 _refine.B_iso_mean 38.392 _refine.aniso_B[1][1] 0.00 _refine.aniso_B[2][2] 0.00 _refine.aniso_B[3][3] 0.00 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.pdbx_starting_model 'PDB entry 2GXS' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model Isotropic _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.182 _refine.pdbx_overall_ESU_R_Free 0.168 _refine.overall_SU_ML 0.106 _refine.overall_SU_B 7.234 _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag 'LIKELY RESIDUAL' _refine.pdbx_diffrn_id 1 _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1814 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 40 _refine_hist.number_atoms_solvent 66 _refine_hist.number_atoms_total 1920 _refine_hist.d_res_high 2.15 _refine_hist.d_res_low 29.30 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.017 0.022 ? 1881 'X-RAY DIFFRACTION' ? r_bond_other_d 0.001 0.020 ? 1263 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.695 1.994 ? 2541 'X-RAY DIFFRACTION' ? r_angle_other_deg 1.034 3.000 ? 3093 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 6.684 5.000 ? 230 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 37.855 24.684 ? 79 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 15.813 15.000 ? 343 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 15.476 15.000 ? 11 'X-RAY DIFFRACTION' ? r_chiral_restr 0.099 0.200 ? 301 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.006 0.020 ? 2022 'X-RAY DIFFRACTION' ? r_gen_planes_other 0.001 0.020 ? 354 'X-RAY DIFFRACTION' ? r_nbd_refined 0.212 0.200 ? 344 'X-RAY DIFFRACTION' ? r_nbd_other 0.196 0.200 ? 1270 'X-RAY DIFFRACTION' ? r_nbtor_refined 0.177 0.500 ? 874 'X-RAY DIFFRACTION' ? r_nbtor_other 0.096 0.500 ? 974 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 0.171 0.300 ? 151 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 0.104 0.200 ? 11 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other 0.284 0.200 ? 41 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 0.356 0.300 ? 6 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 0.949 1.500 ? 1188 'X-RAY DIFFRACTION' ? r_mcbond_other 0.202 1.500 ? 475 'X-RAY DIFFRACTION' ? r_mcangle_it 1.564 2.000 ? 1857 'X-RAY DIFFRACTION' ? r_scbond_it 2.248 3.000 ? 782 'X-RAY DIFFRACTION' ? r_scangle_it 3.490 4.500 ? 683 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 2.150 _refine_ls_shell.d_res_low 2.206 _refine_ls_shell.number_reflns_R_work 1422 _refine_ls_shell.R_factor_R_work 0.211 _refine_ls_shell.percent_reflns_obs 100.00 _refine_ls_shell.R_factor_R_free 0.235 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 75 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 2PL3 _struct.title 'Human DEAD-box RNA helicase DDX10, DEAD domain in complex with ADP' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2PL3 _struct_keywords.pdbx_keywords HYDROLASE _struct_keywords.text 'RNA, HELICASE, DEAD, STRUCTURAL GENOMICS, STRUCTURAL GENOMICS CONSORTIUM, SGC, HYDROLASE' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 4 ? F N N 4 ? G N N 4 ? H N N 5 ? # _struct_biol.id 1 _struct_biol.details 'The monomer in the ASU is the biological assembly' _struct_biol.pdbx_parent_biol_id ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 MET A 2 ? ASN A 15 ? MET A 46 ASN A 59 1 ? 14 HELX_P HELX_P2 2 ASN A 20 ? ILE A 24 ? ASN A 64 ILE A 68 5 ? 5 HELX_P HELX_P3 3 ARG A 26 ? PHE A 30 ? ARG A 70 PHE A 74 5 ? 5 HELX_P HELX_P4 4 SER A 33 ? ALA A 43 ? SER A 77 ALA A 87 1 ? 11 HELX_P HELX_P5 5 THR A 49 ? GLN A 61 ? THR A 93 GLN A 105 1 ? 13 HELX_P HELX_P6 6 GLY A 74 ? LEU A 90 ? GLY A 118 LEU A 134 1 ? 17 HELX_P HELX_P7 7 THR A 93 ? GLY A 97 ? THR A 137 GLY A 141 5 ? 5 HELX_P HELX_P8 8 THR A 106 ? GLY A 121 ? THR A 150 GLY A 165 1 ? 16 HELX_P HELX_P9 9 LEU A 137 ? ASN A 145 ? LEU A 181 ASN A 189 1 ? 9 HELX_P HELX_P10 10 THR A 153 ? THR A 164 ? THR A 197 THR A 208 1 ? 12 HELX_P HELX_P11 11 GLU A 179 ? MET A 186 ? GLU A 223 MET A 230 1 ? 8 HELX_P HELX_P12 12 PHE A 188 ? ASN A 198 ? PHE A 232 ASN A 242 1 ? 11 HELX_P HELX_P13 13 THR A 213 ? SER A 223 ? THR A 257 SER A 267 1 ? 11 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? A GLU 179 OE2 ? ? ? 1_555 B MG . MG ? ? A GLU 223 A MG 301 1_555 ? ? ? ? ? ? ? 2.070 ? ? metalc2 metalc ? ? C ADP . O1B ? ? ? 1_555 B MG . MG ? ? A ADP 300 A MG 301 1_555 ? ? ? ? ? ? ? 2.109 ? ? metalc3 metalc ? ? B MG . MG ? ? ? 1_555 H HOH . O ? ? A MG 301 A HOH 404 1_555 ? ? ? ? ? ? ? 2.160 ? ? metalc4 metalc ? ? B MG . MG ? ? ? 1_555 H HOH . O ? ? A MG 301 A HOH 405 1_555 ? ? ? ? ? ? ? 2.180 ? ? metalc5 metalc ? ? B MG . MG ? ? ? 1_555 H HOH . O ? ? A MG 301 A HOH 406 1_555 ? ? ? ? ? ? ? 2.145 ? ? metalc6 metalc ? ? B MG . MG ? ? ? 1_555 H HOH . O ? ? A MG 301 A HOH 469 1_555 ? ? ? ? ? ? ? 2.196 ? ? # _struct_conn_type.id metalc _struct_conn_type.criteria ? _struct_conn_type.reference ? # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 7 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? parallel A 2 3 ? parallel A 3 4 ? parallel A 4 5 ? parallel A 5 6 ? parallel A 6 7 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 ALA A 128 ? ILE A 131 ? ALA A 172 ILE A 175 A 2 ILE A 149 ? CYS A 152 ? ILE A 193 CYS A 196 A 3 VAL A 100 ? ILE A 103 ? VAL A 144 ILE A 147 A 4 MET A 174 ? LEU A 177 ? MET A 218 LEU A 221 A 5 GLN A 204 ? SER A 209 ? GLN A 248 SER A 253 A 6 VAL A 65 ? ALA A 68 ? VAL A 109 ALA A 112 A 7 GLU A 228 ? TRP A 231 ? GLU A 272 TRP A 275 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N ILE A 131 ? N ILE A 175 O VAL A 151 ? O VAL A 195 A 2 3 O LEU A 150 ? O LEU A 194 N ILE A 102 ? N ILE A 146 A 3 4 N ILE A 103 ? N ILE A 147 O VAL A 176 ? O VAL A 220 A 4 5 N LEU A 175 ? N LEU A 219 O LEU A 206 ? O LEU A 250 A 5 6 O LEU A 207 ? O LEU A 251 N VAL A 65 ? N VAL A 109 A 6 7 N LEU A 66 ? N LEU A 110 O GLU A 228 ? O GLU A 272 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A MG 301 ? 6 'BINDING SITE FOR RESIDUE MG A 301' AC2 Software A ADP 300 ? 22 'BINDING SITE FOR RESIDUE ADP A 300' AC3 Software A EOH 400 ? 1 'BINDING SITE FOR RESIDUE EOH A 400' AC4 Software A EOH 401 ? 5 'BINDING SITE FOR RESIDUE EOH A 401' AC5 Software A EOH 402 ? 5 'BINDING SITE FOR RESIDUE EOH A 402' AC6 Software A EOH 403 ? 4 'BINDING SITE FOR RESIDUE EOH A 403' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 6 GLU A 179 ? GLU A 223 . ? 1_555 ? 2 AC1 6 ADP C . ? ADP A 300 . ? 1_555 ? 3 AC1 6 HOH H . ? HOH A 404 . ? 1_555 ? 4 AC1 6 HOH H . ? HOH A 405 . ? 1_555 ? 5 AC1 6 HOH H . ? HOH A 406 . ? 1_555 ? 6 AC1 6 HOH H . ? HOH A 469 . ? 1_555 ? 7 AC2 22 SER A 1 ? SER A 45 . ? 8_445 ? 8 AC2 22 MET A 2 ? MET A 46 . ? 8_445 ? 9 AC2 22 GLN A 3 ? GLN A 47 . ? 8_445 ? 10 AC2 22 ARG A 6 ? ARG A 50 . ? 8_445 ? 11 AC2 22 PHE A 27 ? PHE A 71 . ? 1_555 ? 12 AC2 22 TYR A 45 ? TYR A 89 . ? 1_555 ? 13 AC2 22 LEU A 47 ? LEU A 91 . ? 1_555 ? 14 AC2 22 GLN A 52 ? GLN A 96 . ? 1_555 ? 15 AC2 22 THR A 71 ? THR A 115 . ? 1_555 ? 16 AC2 22 GLY A 72 ? GLY A 116 . ? 1_555 ? 17 AC2 22 SER A 73 ? SER A 117 . ? 1_555 ? 18 AC2 22 GLY A 74 ? GLY A 118 . ? 1_555 ? 19 AC2 22 LYS A 75 ? LYS A 119 . ? 1_555 ? 20 AC2 22 THR A 76 ? THR A 120 . ? 1_555 ? 21 AC2 22 GLU A 179 ? GLU A 223 . ? 1_555 ? 22 AC2 22 MG B . ? MG A 301 . ? 1_555 ? 23 AC2 22 HOH H . ? HOH A 404 . ? 1_555 ? 24 AC2 22 HOH H . ? HOH A 406 . ? 1_555 ? 25 AC2 22 HOH H . ? HOH A 410 . ? 1_555 ? 26 AC2 22 HOH H . ? HOH A 415 . ? 1_555 ? 27 AC2 22 HOH H . ? HOH A 448 . ? 1_555 ? 28 AC2 22 HOH H . ? HOH A 469 . ? 1_555 ? 29 AC3 1 LEU A 109 ? LEU A 153 . ? 1_555 ? 30 AC4 5 GLN A 54 ? GLN A 98 . ? 1_555 ? 31 AC4 5 GLN A 212 ? GLN A 256 . ? 8_555 ? 32 AC4 5 LYS A 214 ? LYS A 258 . ? 8_555 ? 33 AC4 5 LYS A 217 ? LYS A 261 . ? 8_555 ? 34 AC4 5 HOH H . ? HOH A 417 . ? 1_555 ? 35 AC5 5 ALA A 68 ? ALA A 112 . ? 8_555 ? 36 AC5 5 ALA A 210 ? ALA A 254 . ? 8_555 ? 37 AC5 5 TRP A 231 ? TRP A 275 . ? 1_555 ? 38 AC5 5 VAL A 232 ? VAL A 276 . ? 8_555 ? 39 AC5 5 HIS A 233 ? HIS A 277 . ? 1_555 ? 40 AC6 4 ALA A 189 ? ALA A 233 . ? 1_555 ? 41 AC6 4 ASN A 193 ? ASN A 237 . ? 1_555 ? 42 AC6 4 LEU A 219 ? LEU A 263 . ? 1_555 ? 43 AC6 4 LEU A 222 ? LEU A 266 . ? 1_555 ? # _database_PDB_matrix.entry_id 2PL3 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 2PL3 _atom_sites.fract_transf_matrix[1][1] 0.015748 _atom_sites.fract_transf_matrix[1][2] 0.009092 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.018184 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.003289 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C MG N O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 SER 1 45 45 SER SER A . n A 1 2 MET 2 46 46 MET MET A . n A 1 3 GLN 3 47 47 GLN GLN A . n A 1 4 VAL 4 48 48 VAL VAL A . n A 1 5 GLU 5 49 49 GLU GLU A . n A 1 6 ARG 6 50 50 ARG ARG A . n A 1 7 GLU 7 51 51 GLU GLU A . n A 1 8 SER 8 52 52 SER SER A . n A 1 9 ILE 9 53 53 ILE ILE A . n A 1 10 SER 10 54 54 SER SER A . n A 1 11 ARG 11 55 55 ARG ARG A . n A 1 12 LEU 12 56 56 LEU LEU A . n A 1 13 MET 13 57 57 MET MET A . n A 1 14 GLN 14 58 58 GLN GLN A . n A 1 15 ASN 15 59 59 ASN ASN A . n A 1 16 TYR 16 60 60 TYR TYR A . n A 1 17 GLU 17 61 61 GLU GLU A . n A 1 18 LYS 18 62 62 LYS LYS A . n A 1 19 ILE 19 63 63 ILE ILE A . n A 1 20 ASN 20 64 64 ASN ASN A . n A 1 21 VAL 21 65 65 VAL VAL A . n A 1 22 ASN 22 66 66 ASN ASN A . n A 1 23 GLU 23 67 67 GLU GLU A . n A 1 24 ILE 24 68 68 ILE ILE A . n A 1 25 THR 25 69 69 THR THR A . n A 1 26 ARG 26 70 70 ARG ARG A . n A 1 27 PHE 27 71 71 PHE PHE A . n A 1 28 SER 28 72 72 SER SER A . n A 1 29 ASP 29 73 73 ASP ASP A . n A 1 30 PHE 30 74 74 PHE PHE A . n A 1 31 PRO 31 75 75 PRO PRO A . n A 1 32 LEU 32 76 76 LEU LEU A . n A 1 33 SER 33 77 77 SER SER A . n A 1 34 LYS 34 78 78 LYS LYS A . n A 1 35 LYS 35 79 79 LYS LYS A . n A 1 36 THR 36 80 80 THR THR A . n A 1 37 LEU 37 81 81 LEU LEU A . n A 1 38 LYS 38 82 82 LYS LYS A . n A 1 39 GLY 39 83 83 GLY GLY A . n A 1 40 LEU 40 84 84 LEU LEU A . n A 1 41 GLN 41 85 85 GLN GLN A . n A 1 42 GLU 42 86 86 GLU GLU A . n A 1 43 ALA 43 87 87 ALA ALA A . n A 1 44 GLN 44 88 88 GLN GLN A . n A 1 45 TYR 45 89 89 TYR TYR A . n A 1 46 ARG 46 90 90 ARG ARG A . n A 1 47 LEU 47 91 91 LEU LEU A . n A 1 48 VAL 48 92 92 VAL VAL A . n A 1 49 THR 49 93 93 THR THR A . n A 1 50 GLU 50 94 94 GLU GLU A . n A 1 51 ILE 51 95 95 ILE ILE A . n A 1 52 GLN 52 96 96 GLN GLN A . n A 1 53 LYS 53 97 97 LYS LYS A . n A 1 54 GLN 54 98 98 GLN GLN A . n A 1 55 THR 55 99 99 THR THR A . n A 1 56 ILE 56 100 100 ILE ILE A . n A 1 57 GLY 57 101 101 GLY GLY A . n A 1 58 LEU 58 102 102 LEU LEU A . n A 1 59 ALA 59 103 103 ALA ALA A . n A 1 60 LEU 60 104 104 LEU LEU A . n A 1 61 GLN 61 105 105 GLN GLN A . n A 1 62 GLY 62 106 106 GLY GLY A . n A 1 63 LYS 63 107 107 LYS LYS A . n A 1 64 ASP 64 108 108 ASP ASP A . n A 1 65 VAL 65 109 109 VAL VAL A . n A 1 66 LEU 66 110 110 LEU LEU A . n A 1 67 GLY 67 111 111 GLY GLY A . n A 1 68 ALA 68 112 112 ALA ALA A . n A 1 69 ALA 69 113 113 ALA ALA A . n A 1 70 LYS 70 114 114 LYS LYS A . n A 1 71 THR 71 115 115 THR THR A . n A 1 72 GLY 72 116 116 GLY GLY A . n A 1 73 SER 73 117 117 SER SER A . n A 1 74 GLY 74 118 118 GLY GLY A . n A 1 75 LYS 75 119 119 LYS LYS A . n A 1 76 THR 76 120 120 THR THR A . n A 1 77 LEU 77 121 121 LEU LEU A . n A 1 78 ALA 78 122 122 ALA ALA A . n A 1 79 PHE 79 123 123 PHE PHE A . n A 1 80 LEU 80 124 124 LEU LEU A . n A 1 81 VAL 81 125 125 VAL VAL A . n A 1 82 PRO 82 126 126 PRO PRO A . n A 1 83 VAL 83 127 127 VAL VAL A . n A 1 84 LEU 84 128 128 LEU LEU A . n A 1 85 GLU 85 129 129 GLU GLU A . n A 1 86 ALA 86 130 130 ALA ALA A . n A 1 87 LEU 87 131 131 LEU LEU A . n A 1 88 TYR 88 132 132 TYR TYR A . n A 1 89 ARG 89 133 133 ARG ARG A . n A 1 90 LEU 90 134 134 LEU LEU A . n A 1 91 GLN 91 135 135 GLN GLN A . n A 1 92 TRP 92 136 136 TRP TRP A . n A 1 93 THR 93 137 137 THR THR A . n A 1 94 SER 94 138 138 SER SER A . n A 1 95 THR 95 139 139 THR THR A . n A 1 96 ASP 96 140 140 ASP ASP A . n A 1 97 GLY 97 141 141 GLY GLY A . n A 1 98 LEU 98 142 142 LEU LEU A . n A 1 99 GLY 99 143 143 GLY GLY A . n A 1 100 VAL 100 144 144 VAL VAL A . n A 1 101 LEU 101 145 145 LEU LEU A . n A 1 102 ILE 102 146 146 ILE ILE A . n A 1 103 ILE 103 147 147 ILE ILE A . n A 1 104 SER 104 148 148 SER SER A . n A 1 105 PRO 105 149 149 PRO PRO A . n A 1 106 THR 106 150 150 THR THR A . n A 1 107 ARG 107 151 151 ARG ARG A . n A 1 108 GLU 108 152 152 GLU GLU A . n A 1 109 LEU 109 153 153 LEU LEU A . n A 1 110 ALA 110 154 154 ALA ALA A . n A 1 111 TYR 111 155 155 TYR TYR A . n A 1 112 GLN 112 156 156 GLN GLN A . n A 1 113 THR 113 157 157 THR THR A . n A 1 114 PHE 114 158 158 PHE PHE A . n A 1 115 GLU 115 159 159 GLU GLU A . n A 1 116 VAL 116 160 160 VAL VAL A . n A 1 117 LEU 117 161 161 LEU LEU A . n A 1 118 ARG 118 162 162 ARG ARG A . n A 1 119 LYS 119 163 163 LYS LYS A . n A 1 120 VAL 120 164 164 VAL VAL A . n A 1 121 GLY 121 165 165 GLY GLY A . n A 1 122 LYS 122 166 166 LYS LYS A . n A 1 123 ASN 123 167 167 ASN ASN A . n A 1 124 HIS 124 168 168 HIS HIS A . n A 1 125 ASP 125 169 169 ASP ASP A . n A 1 126 PHE 126 170 170 PHE PHE A . n A 1 127 SER 127 171 171 SER SER A . n A 1 128 ALA 128 172 172 ALA ALA A . n A 1 129 GLY 129 173 173 GLY GLY A . n A 1 130 LEU 130 174 174 LEU LEU A . n A 1 131 ILE 131 175 175 ILE ILE A . n A 1 132 ILE 132 176 176 ILE ILE A . n A 1 133 GLY 133 177 177 GLY GLY A . n A 1 134 GLY 134 178 178 GLY GLY A . n A 1 135 LYS 135 179 ? ? ? A . n A 1 136 ASP 136 180 ? ? ? A . n A 1 137 LEU 137 181 181 LEU LEU A . n A 1 138 LYS 138 182 182 LYS LYS A . n A 1 139 HIS 139 183 183 HIS HIS A . n A 1 140 GLU 140 184 184 GLU GLU A . n A 1 141 ALA 141 185 185 ALA ALA A . n A 1 142 GLU 142 186 186 GLU GLU A . n A 1 143 ARG 143 187 187 ARG ARG A . n A 1 144 ILE 144 188 188 ILE ILE A . n A 1 145 ASN 145 189 189 ASN ASN A . n A 1 146 ASN 146 190 190 ASN ASN A . n A 1 147 ILE 147 191 191 ILE ILE A . n A 1 148 ASN 148 192 192 ASN ASN A . n A 1 149 ILE 149 193 193 ILE ILE A . n A 1 150 LEU 150 194 194 LEU LEU A . n A 1 151 VAL 151 195 195 VAL VAL A . n A 1 152 CYS 152 196 196 CYS CYS A . n A 1 153 THR 153 197 197 THR THR A . n A 1 154 PRO 154 198 198 PRO PRO A . n A 1 155 GLY 155 199 199 GLY GLY A . n A 1 156 ARG 156 200 200 ARG ARG A . n A 1 157 LEU 157 201 201 LEU LEU A . n A 1 158 LEU 158 202 202 LEU LEU A . n A 1 159 GLN 159 203 203 GLN GLN A . n A 1 160 HIS 160 204 204 HIS HIS A . n A 1 161 MET 161 205 205 MET MET A . n A 1 162 ASP 162 206 206 ASP ASP A . n A 1 163 GLU 163 207 207 GLU GLU A . n A 1 164 THR 164 208 208 THR THR A . n A 1 165 VAL 165 209 209 VAL VAL A . n A 1 166 SER 166 210 210 SER SER A . n A 1 167 PHE 167 211 211 PHE PHE A . n A 1 168 HIS 168 212 212 HIS HIS A . n A 1 169 ALA 169 213 213 ALA ALA A . n A 1 170 THR 170 214 214 THR THR A . n A 1 171 ASP 171 215 215 ASP ASP A . n A 1 172 LEU 172 216 216 LEU LEU A . n A 1 173 GLN 173 217 217 GLN GLN A . n A 1 174 MET 174 218 218 MET MET A . n A 1 175 LEU 175 219 219 LEU LEU A . n A 1 176 VAL 176 220 220 VAL VAL A . n A 1 177 LEU 177 221 221 LEU LEU A . n A 1 178 ASP 178 222 222 ASP ASP A . n A 1 179 GLU 179 223 223 GLU GLU A . n A 1 180 ALA 180 224 224 ALA ALA A . n A 1 181 ASP 181 225 225 ASP ASP A . n A 1 182 ARG 182 226 226 ARG ARG A . n A 1 183 ILE 183 227 227 ILE ILE A . n A 1 184 LEU 184 228 228 LEU LEU A . n A 1 185 ASP 185 229 229 ASP ASP A . n A 1 186 MET 186 230 230 MET MET A . n A 1 187 GLY 187 231 231 GLY GLY A . n A 1 188 PHE 188 232 232 PHE PHE A . n A 1 189 ALA 189 233 233 ALA ALA A . n A 1 190 ASP 190 234 234 ASP ASP A . n A 1 191 THR 191 235 235 THR THR A . n A 1 192 MET 192 236 236 MET MET A . n A 1 193 ASN 193 237 237 ASN ASN A . n A 1 194 ALA 194 238 238 ALA ALA A . n A 1 195 VAL 195 239 239 VAL VAL A . n A 1 196 ILE 196 240 240 ILE ILE A . n A 1 197 GLU 197 241 241 GLU GLU A . n A 1 198 ASN 198 242 242 ASN ASN A . n A 1 199 LEU 199 243 243 LEU LEU A . n A 1 200 PRO 200 244 244 PRO PRO A . n A 1 201 LYS 201 245 245 LYS LYS A . n A 1 202 LYS 202 246 246 LYS LYS A . n A 1 203 ARG 203 247 247 ARG ARG A . n A 1 204 GLN 204 248 248 GLN GLN A . n A 1 205 THR 205 249 249 THR THR A . n A 1 206 LEU 206 250 250 LEU LEU A . n A 1 207 LEU 207 251 251 LEU LEU A . n A 1 208 PHE 208 252 252 PHE PHE A . n A 1 209 SER 209 253 253 SER SER A . n A 1 210 ALA 210 254 254 ALA ALA A . n A 1 211 THR 211 255 255 THR THR A . n A 1 212 GLN 212 256 256 GLN GLN A . n A 1 213 THR 213 257 257 THR THR A . n A 1 214 LYS 214 258 258 LYS LYS A . n A 1 215 SER 215 259 259 SER SER A . n A 1 216 VAL 216 260 260 VAL VAL A . n A 1 217 LYS 217 261 261 LYS LYS A . n A 1 218 ASP 218 262 262 ASP ASP A . n A 1 219 LEU 219 263 263 LEU LEU A . n A 1 220 ALA 220 264 264 ALA ALA A . n A 1 221 ARG 221 265 265 ARG ARG A . n A 1 222 LEU 222 266 266 LEU LEU A . n A 1 223 SER 223 267 267 SER SER A . n A 1 224 LEU 224 268 268 LEU LEU A . n A 1 225 LYS 225 269 269 LYS LYS A . n A 1 226 ASN 226 270 270 ASN ASN A . n A 1 227 PRO 227 271 271 PRO PRO A . n A 1 228 GLU 228 272 272 GLU GLU A . n A 1 229 TYR 229 273 273 TYR TYR A . n A 1 230 VAL 230 274 274 VAL VAL A . n A 1 231 TRP 231 275 275 TRP TRP A . n A 1 232 VAL 232 276 276 VAL VAL A . n A 1 233 HIS 233 277 277 HIS HIS A . n A 1 234 GLU 234 278 278 GLU GLU A . n A 1 235 LYS 235 279 ? ? ? A . n A 1 236 ALA 236 280 ? ? ? A . n # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name ? _pdbx_SG_project.full_name_of_center 'Structural Genomics Consortium' _pdbx_SG_project.initial_of_center SGC # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 MG 1 301 301 MG MO4 A . C 3 ADP 1 300 300 ADP ADP A . D 4 EOH 1 400 400 EOH EOH A . E 4 EOH 1 401 401 EOH EOH A . F 4 EOH 1 402 402 EOH EOH A . G 4 EOH 1 403 403 EOH EOH A . H 5 HOH 1 404 301 HOH MO4 A . H 5 HOH 2 405 301 HOH MO4 A . H 5 HOH 3 406 301 HOH MO4 A . H 5 HOH 4 407 1 HOH HOH A . H 5 HOH 5 408 2 HOH HOH A . H 5 HOH 6 409 3 HOH HOH A . H 5 HOH 7 410 4 HOH HOH A . H 5 HOH 8 411 5 HOH HOH A . H 5 HOH 9 412 6 HOH HOH A . H 5 HOH 10 413 7 HOH HOH A . H 5 HOH 11 414 8 HOH HOH A . H 5 HOH 12 415 9 HOH HOH A . H 5 HOH 13 416 10 HOH HOH A . H 5 HOH 14 417 11 HOH HOH A . H 5 HOH 15 418 12 HOH HOH A . H 5 HOH 16 419 13 HOH HOH A . H 5 HOH 17 420 14 HOH HOH A . H 5 HOH 18 421 15 HOH HOH A . H 5 HOH 19 422 16 HOH HOH A . H 5 HOH 20 423 17 HOH HOH A . H 5 HOH 21 424 18 HOH HOH A . H 5 HOH 22 425 19 HOH HOH A . H 5 HOH 23 426 20 HOH HOH A . H 5 HOH 24 427 21 HOH HOH A . H 5 HOH 25 428 22 HOH HOH A . H 5 HOH 26 429 23 HOH HOH A . H 5 HOH 27 430 24 HOH HOH A . H 5 HOH 28 431 25 HOH HOH A . H 5 HOH 29 432 26 HOH HOH A . H 5 HOH 30 433 27 HOH HOH A . H 5 HOH 31 434 28 HOH HOH A . H 5 HOH 32 435 29 HOH HOH A . H 5 HOH 33 436 30 HOH HOH A . H 5 HOH 34 437 31 HOH HOH A . H 5 HOH 35 438 32 HOH HOH A . H 5 HOH 36 439 33 HOH HOH A . H 5 HOH 37 440 34 HOH HOH A . H 5 HOH 38 441 35 HOH HOH A . H 5 HOH 39 442 36 HOH HOH A . H 5 HOH 40 443 37 HOH HOH A . H 5 HOH 41 444 38 HOH HOH A . H 5 HOH 42 445 39 HOH HOH A . H 5 HOH 43 446 40 HOH HOH A . H 5 HOH 44 447 41 HOH HOH A . H 5 HOH 45 448 42 HOH HOH A . H 5 HOH 46 449 43 HOH HOH A . H 5 HOH 47 450 44 HOH HOH A . H 5 HOH 48 451 45 HOH HOH A . H 5 HOH 49 452 46 HOH HOH A . H 5 HOH 50 453 47 HOH HOH A . H 5 HOH 51 454 48 HOH HOH A . H 5 HOH 52 455 49 HOH HOH A . H 5 HOH 53 456 50 HOH HOH A . H 5 HOH 54 457 51 HOH HOH A . H 5 HOH 55 458 52 HOH HOH A . H 5 HOH 56 459 53 HOH HOH A . H 5 HOH 57 460 54 HOH HOH A . H 5 HOH 58 461 55 HOH HOH A . H 5 HOH 59 462 56 HOH HOH A . H 5 HOH 60 463 57 HOH HOH A . H 5 HOH 61 464 58 HOH HOH A . H 5 HOH 62 465 59 HOH HOH A . H 5 HOH 63 466 60 HOH HOH A . H 5 HOH 64 467 61 HOH HOH A . H 5 HOH 65 468 62 HOH HOH A . H 5 HOH 66 469 301 HOH MO4 A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 OE2 ? A GLU 179 ? A GLU 223 ? 1_555 MG ? B MG . ? A MG 301 ? 1_555 O1B ? C ADP . ? A ADP 300 ? 1_555 94.3 ? 2 OE2 ? A GLU 179 ? A GLU 223 ? 1_555 MG ? B MG . ? A MG 301 ? 1_555 O ? H HOH . ? A HOH 404 ? 1_555 85.4 ? 3 O1B ? C ADP . ? A ADP 300 ? 1_555 MG ? B MG . ? A MG 301 ? 1_555 O ? H HOH . ? A HOH 404 ? 1_555 84.9 ? 4 OE2 ? A GLU 179 ? A GLU 223 ? 1_555 MG ? B MG . ? A MG 301 ? 1_555 O ? H HOH . ? A HOH 405 ? 1_555 91.7 ? 5 O1B ? C ADP . ? A ADP 300 ? 1_555 MG ? B MG . ? A MG 301 ? 1_555 O ? H HOH . ? A HOH 405 ? 1_555 173.9 ? 6 O ? H HOH . ? A HOH 404 ? 1_555 MG ? B MG . ? A MG 301 ? 1_555 O ? H HOH . ? A HOH 405 ? 1_555 95.3 ? 7 OE2 ? A GLU 179 ? A GLU 223 ? 1_555 MG ? B MG . ? A MG 301 ? 1_555 O ? H HOH . ? A HOH 406 ? 1_555 178.9 ? 8 O1B ? C ADP . ? A ADP 300 ? 1_555 MG ? B MG . ? A MG 301 ? 1_555 O ? H HOH . ? A HOH 406 ? 1_555 86.3 ? 9 O ? H HOH . ? A HOH 404 ? 1_555 MG ? B MG . ? A MG 301 ? 1_555 O ? H HOH . ? A HOH 406 ? 1_555 93.7 ? 10 O ? H HOH . ? A HOH 405 ? 1_555 MG ? B MG . ? A MG 301 ? 1_555 O ? H HOH . ? A HOH 406 ? 1_555 87.7 ? 11 OE2 ? A GLU 179 ? A GLU 223 ? 1_555 MG ? B MG . ? A MG 301 ? 1_555 O ? H HOH . ? A HOH 469 ? 1_555 89.0 ? 12 O1B ? C ADP . ? A ADP 300 ? 1_555 MG ? B MG . ? A MG 301 ? 1_555 O ? H HOH . ? A HOH 469 ? 1_555 86.5 ? 13 O ? H HOH . ? A HOH 404 ? 1_555 MG ? B MG . ? A MG 301 ? 1_555 O ? H HOH . ? A HOH 469 ? 1_555 169.3 ? 14 O ? H HOH . ? A HOH 405 ? 1_555 MG ? B MG . ? A MG 301 ? 1_555 O ? H HOH . ? A HOH 469 ? 1_555 93.9 ? 15 O ? H HOH . ? A HOH 406 ? 1_555 MG ? B MG . ? A MG 301 ? 1_555 O ? H HOH . ? A HOH 469 ? 1_555 92.0 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2007-05-01 2 'Structure model' 1 1 2008-05-01 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2017-10-18 5 'Structure model' 1 4 2023-08-30 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' Advisory 3 3 'Structure model' 'Version format compliance' 4 4 'Structure model' 'Data collection' 5 4 'Structure model' 'Refinement description' 6 5 'Structure model' 'Data collection' 7 5 'Structure model' 'Database references' 8 5 'Structure model' 'Derived calculations' 9 5 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' diffrn_source 2 4 'Structure model' software 3 5 'Structure model' chem_comp_atom 4 5 'Structure model' chem_comp_bond 5 5 'Structure model' database_2 6 5 'Structure model' pdbx_initial_refinement_model 7 5 'Structure model' pdbx_struct_conn_angle 8 5 'Structure model' struct_conn 9 5 'Structure model' struct_ref_seq_dif 10 5 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_diffrn_source.pdbx_synchrotron_site' 2 4 'Structure model' '_software.name' 3 5 'Structure model' '_database_2.pdbx_DOI' 4 5 'Structure model' '_database_2.pdbx_database_accession' 5 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 6 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 7 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 8 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 9 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 10 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 11 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 12 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 13 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 14 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 15 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 16 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 17 5 'Structure model' '_pdbx_struct_conn_angle.value' 18 5 'Structure model' '_struct_conn.pdbx_dist_value' 19 5 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 20 5 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 21 5 'Structure model' '_struct_conn.ptnr1_label_asym_id' 22 5 'Structure model' '_struct_conn.ptnr1_label_atom_id' 23 5 'Structure model' '_struct_conn.ptnr1_label_comp_id' 24 5 'Structure model' '_struct_conn.ptnr1_label_seq_id' 25 5 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 26 5 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 27 5 'Structure model' '_struct_conn.ptnr2_label_asym_id' 28 5 'Structure model' '_struct_conn.ptnr2_label_atom_id' 29 5 'Structure model' '_struct_conn.ptnr2_label_comp_id' 30 5 'Structure model' '_struct_conn.ptnr2_label_seq_id' 31 5 'Structure model' '_struct_ref_seq_dif.details' 32 5 'Structure model' '_struct_site.pdbx_auth_asym_id' 33 5 'Structure model' '_struct_site.pdbx_auth_comp_id' 34 5 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.pdbx_refine_id 1 ? refined -0.8060 -32.4700 -6.3610 0.0372 -0.0154 -0.1055 0.2017 0.0411 -0.0428 14.6083 30.3815 0.0000 -3.9720 -0.1874 0.0000 -0.3848 -0.3073 -0.0220 0.5616 0.4356 -0.0503 -0.3125 -0.9057 -0.0508 'X-RAY DIFFRACTION' 2 ? refined -13.1670 -20.9870 3.3910 0.0229 -0.1666 -0.0983 0.0610 0.0322 0.0500 1.5458 2.5761 3.3154 -0.2355 0.3958 -0.1020 -0.0905 0.0925 -0.1568 -0.0189 0.0084 0.2556 0.6357 0.1857 0.0822 'X-RAY DIFFRACTION' 3 ? refined -5.9590 -25.0490 21.2170 0.4344 -0.1138 -0.1985 0.2583 0.0672 0.2122 9.0208 5.4530 13.6122 2.1047 6.4454 2.8393 0.0493 -1.0661 -0.4288 2.0297 0.3011 -0.2848 2.0965 0.6237 -0.3503 'X-RAY DIFFRACTION' 4 ? refined -4.8460 -9.8380 12.9300 -0.0510 0.0593 -0.1719 0.0718 -0.0331 0.0442 0.9850 3.3747 3.5477 -0.5630 -0.3574 -0.2052 -0.1534 -0.2295 0.0356 0.3981 0.0690 -0.1024 0.0280 0.6979 0.0843 'X-RAY DIFFRACTION' # loop_ _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.selection_details 1 1 A 45 A 1 A 56 A 12 ? 'X-RAY DIFFRACTION' ? 2 2 A 57 A 13 A 167 A 123 ? 'X-RAY DIFFRACTION' ? 3 3 A 168 A 124 A 188 A 144 ? 'X-RAY DIFFRACTION' ? 4 4 A 189 A 145 A 278 A 234 ? 'X-RAY DIFFRACTION' ? # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal REFMAC refinement 5.3.0032 ? 1 MAR345 'data collection' 345DTB ? 2 XDS 'data reduction' . ? 3 XSCALE 'data scaling' . ? 4 MOLREP phasing . ? 5 # _pdbx_validate_symm_contact.id 1 _pdbx_validate_symm_contact.PDB_model_num 1 _pdbx_validate_symm_contact.auth_atom_id_1 NH1 _pdbx_validate_symm_contact.auth_asym_id_1 A _pdbx_validate_symm_contact.auth_comp_id_1 ARG _pdbx_validate_symm_contact.auth_seq_id_1 90 _pdbx_validate_symm_contact.PDB_ins_code_1 ? _pdbx_validate_symm_contact.label_alt_id_1 ? _pdbx_validate_symm_contact.site_symmetry_1 1_555 _pdbx_validate_symm_contact.auth_atom_id_2 O _pdbx_validate_symm_contact.auth_asym_id_2 A _pdbx_validate_symm_contact.auth_comp_id_2 LEU _pdbx_validate_symm_contact.auth_seq_id_2 134 _pdbx_validate_symm_contact.PDB_ins_code_2 ? _pdbx_validate_symm_contact.label_alt_id_2 ? _pdbx_validate_symm_contact.site_symmetry_2 8_445 _pdbx_validate_symm_contact.dist 2.12 # _pdbx_validate_torsion.id 1 _pdbx_validate_torsion.PDB_model_num 1 _pdbx_validate_torsion.auth_comp_id ASN _pdbx_validate_torsion.auth_asym_id A _pdbx_validate_torsion.auth_seq_id 270 _pdbx_validate_torsion.PDB_ins_code ? _pdbx_validate_torsion.label_alt_id ? _pdbx_validate_torsion.phi 36.31 _pdbx_validate_torsion.psi 64.23 # loop_ _pdbx_validate_peptide_omega.id _pdbx_validate_peptide_omega.PDB_model_num _pdbx_validate_peptide_omega.auth_comp_id_1 _pdbx_validate_peptide_omega.auth_asym_id_1 _pdbx_validate_peptide_omega.auth_seq_id_1 _pdbx_validate_peptide_omega.PDB_ins_code_1 _pdbx_validate_peptide_omega.label_alt_id_1 _pdbx_validate_peptide_omega.auth_comp_id_2 _pdbx_validate_peptide_omega.auth_asym_id_2 _pdbx_validate_peptide_omega.auth_seq_id_2 _pdbx_validate_peptide_omega.PDB_ins_code_2 _pdbx_validate_peptide_omega.label_alt_id_2 _pdbx_validate_peptide_omega.omega 1 1 SER A 45 ? ? MET A 46 ? ? -48.66 2 1 MET A 46 ? ? GLN A 47 ? ? -145.12 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A GLU 61 ? CG ? A GLU 17 CG 2 1 Y 1 A GLU 61 ? CD ? A GLU 17 CD 3 1 Y 1 A GLU 61 ? OE1 ? A GLU 17 OE1 4 1 Y 1 A GLU 61 ? OE2 ? A GLU 17 OE2 5 1 Y 1 A LEU 181 ? CG ? A LEU 137 CG 6 1 Y 1 A LEU 181 ? CD1 ? A LEU 137 CD1 7 1 Y 1 A LEU 181 ? CD2 ? A LEU 137 CD2 8 1 Y 1 A LYS 182 ? CG ? A LYS 138 CG 9 1 Y 1 A LYS 182 ? CD ? A LYS 138 CD 10 1 Y 1 A LYS 182 ? CE ? A LYS 138 CE 11 1 Y 1 A LYS 182 ? NZ ? A LYS 138 NZ 12 1 Y 1 A GLU 186 ? CG ? A GLU 142 CG 13 1 Y 1 A GLU 186 ? CD ? A GLU 142 CD 14 1 Y 1 A GLU 186 ? OE1 ? A GLU 142 OE1 15 1 Y 1 A GLU 186 ? OE2 ? A GLU 142 OE2 16 1 Y 1 A ARG 187 ? CG ? A ARG 143 CG 17 1 Y 1 A ARG 187 ? CD ? A ARG 143 CD 18 1 Y 1 A ARG 187 ? NE ? A ARG 143 NE 19 1 Y 1 A ARG 187 ? CZ ? A ARG 143 CZ 20 1 Y 1 A ARG 187 ? NH1 ? A ARG 143 NH1 21 1 Y 1 A ARG 187 ? NH2 ? A ARG 143 NH2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A LYS 179 ? A LYS 135 2 1 Y 1 A ASP 180 ? A ASP 136 3 1 Y 1 A LYS 279 ? A LYS 235 4 1 Y 1 A ALA 280 ? A ALA 236 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ADP PB P N N 1 ADP O1B O N N 2 ADP O2B O N N 3 ADP O3B O N N 4 ADP PA P N S 5 ADP O1A O N N 6 ADP O2A O N N 7 ADP O3A O N N 8 ADP "O5'" O N N 9 ADP "C5'" C N N 10 ADP "C4'" C N R 11 ADP "O4'" O N N 12 ADP "C3'" C N S 13 ADP "O3'" O N N 14 ADP "C2'" C N R 15 ADP "O2'" O N N 16 ADP "C1'" C N R 17 ADP N9 N Y N 18 ADP C8 C Y N 19 ADP N7 N Y N 20 ADP C5 C Y N 21 ADP C6 C Y N 22 ADP N6 N N N 23 ADP N1 N Y N 24 ADP C2 C Y N 25 ADP N3 N Y N 26 ADP C4 C Y N 27 ADP HOB2 H N N 28 ADP HOB3 H N N 29 ADP HOA2 H N N 30 ADP "H5'1" H N N 31 ADP "H5'2" H N N 32 ADP "H4'" H N N 33 ADP "H3'" H N N 34 ADP "HO3'" H N N 35 ADP "H2'" H N N 36 ADP "HO2'" H N N 37 ADP "H1'" H N N 38 ADP H8 H N N 39 ADP HN61 H N N 40 ADP HN62 H N N 41 ADP H2 H N N 42 ALA N N N N 43 ALA CA C N S 44 ALA C C N N 45 ALA O O N N 46 ALA CB C N N 47 ALA OXT O N N 48 ALA H H N N 49 ALA H2 H N N 50 ALA HA H N N 51 ALA HB1 H N N 52 ALA HB2 H N N 53 ALA HB3 H N N 54 ALA HXT H N N 55 ARG N N N N 56 ARG CA C N S 57 ARG C C N N 58 ARG O O N N 59 ARG CB C N N 60 ARG CG C N N 61 ARG CD C N N 62 ARG NE N N N 63 ARG CZ C N N 64 ARG NH1 N N N 65 ARG NH2 N N N 66 ARG OXT O N N 67 ARG H H N N 68 ARG H2 H N N 69 ARG HA H N N 70 ARG HB2 H N N 71 ARG HB3 H N N 72 ARG HG2 H N N 73 ARG HG3 H N N 74 ARG HD2 H N N 75 ARG HD3 H N N 76 ARG HE H N N 77 ARG HH11 H N N 78 ARG HH12 H N N 79 ARG HH21 H N N 80 ARG HH22 H N N 81 ARG HXT H N N 82 ASN N N N N 83 ASN CA C N S 84 ASN C C N N 85 ASN O O N N 86 ASN CB C N N 87 ASN CG C N N 88 ASN OD1 O N N 89 ASN ND2 N N N 90 ASN OXT O N N 91 ASN H H N N 92 ASN H2 H N N 93 ASN HA H N N 94 ASN HB2 H N N 95 ASN HB3 H N N 96 ASN HD21 H N N 97 ASN HD22 H N N 98 ASN HXT H N N 99 ASP N N N N 100 ASP CA C N S 101 ASP C C N N 102 ASP O O N N 103 ASP CB C N N 104 ASP CG C N N 105 ASP OD1 O N N 106 ASP OD2 O N N 107 ASP OXT O N N 108 ASP H H N N 109 ASP H2 H N N 110 ASP HA H N N 111 ASP HB2 H N N 112 ASP HB3 H N N 113 ASP HD2 H N N 114 ASP HXT H N N 115 CYS N N N N 116 CYS CA C N R 117 CYS C C N N 118 CYS O O N N 119 CYS CB C N N 120 CYS SG S N N 121 CYS OXT O N N 122 CYS H H N N 123 CYS H2 H N N 124 CYS HA H N N 125 CYS HB2 H N N 126 CYS HB3 H N N 127 CYS HG H N N 128 CYS HXT H N N 129 EOH C1 C N N 130 EOH C2 C N N 131 EOH O O N N 132 EOH H11 H N N 133 EOH H12 H N N 134 EOH H21 H N N 135 EOH H22 H N N 136 EOH H23 H N N 137 EOH HO H N N 138 GLN N N N N 139 GLN CA C N S 140 GLN C C N N 141 GLN O O N N 142 GLN CB C N N 143 GLN CG C N N 144 GLN CD C N N 145 GLN OE1 O N N 146 GLN NE2 N N N 147 GLN OXT O N N 148 GLN H H N N 149 GLN H2 H N N 150 GLN HA H N N 151 GLN HB2 H N N 152 GLN HB3 H N N 153 GLN HG2 H N N 154 GLN HG3 H N N 155 GLN HE21 H N N 156 GLN HE22 H N N 157 GLN HXT H N N 158 GLU N N N N 159 GLU CA C N S 160 GLU C C N N 161 GLU O O N N 162 GLU CB C N N 163 GLU CG C N N 164 GLU CD C N N 165 GLU OE1 O N N 166 GLU OE2 O N N 167 GLU OXT O N N 168 GLU H H N N 169 GLU H2 H N N 170 GLU HA H N N 171 GLU HB2 H N N 172 GLU HB3 H N N 173 GLU HG2 H N N 174 GLU HG3 H N N 175 GLU HE2 H N N 176 GLU HXT H N N 177 GLY N N N N 178 GLY CA C N N 179 GLY C C N N 180 GLY O O N N 181 GLY OXT O N N 182 GLY H H N N 183 GLY H2 H N N 184 GLY HA2 H N N 185 GLY HA3 H N N 186 GLY HXT H N N 187 HIS N N N N 188 HIS CA C N S 189 HIS C C N N 190 HIS O O N N 191 HIS CB C N N 192 HIS CG C Y N 193 HIS ND1 N Y N 194 HIS CD2 C Y N 195 HIS CE1 C Y N 196 HIS NE2 N Y N 197 HIS OXT O N N 198 HIS H H N N 199 HIS H2 H N N 200 HIS HA H N N 201 HIS HB2 H N N 202 HIS HB3 H N N 203 HIS HD1 H N N 204 HIS HD2 H N N 205 HIS HE1 H N N 206 HIS HE2 H N N 207 HIS HXT H N N 208 HOH O O N N 209 HOH H1 H N N 210 HOH H2 H N N 211 ILE N N N N 212 ILE CA C N S 213 ILE C C N N 214 ILE O O N N 215 ILE CB C N S 216 ILE CG1 C N N 217 ILE CG2 C N N 218 ILE CD1 C N N 219 ILE OXT O N N 220 ILE H H N N 221 ILE H2 H N N 222 ILE HA H N N 223 ILE HB H N N 224 ILE HG12 H N N 225 ILE HG13 H N N 226 ILE HG21 H N N 227 ILE HG22 H N N 228 ILE HG23 H N N 229 ILE HD11 H N N 230 ILE HD12 H N N 231 ILE HD13 H N N 232 ILE HXT H N N 233 LEU N N N N 234 LEU CA C N S 235 LEU C C N N 236 LEU O O N N 237 LEU CB C N N 238 LEU CG C N N 239 LEU CD1 C N N 240 LEU CD2 C N N 241 LEU OXT O N N 242 LEU H H N N 243 LEU H2 H N N 244 LEU HA H N N 245 LEU HB2 H N N 246 LEU HB3 H N N 247 LEU HG H N N 248 LEU HD11 H N N 249 LEU HD12 H N N 250 LEU HD13 H N N 251 LEU HD21 H N N 252 LEU HD22 H N N 253 LEU HD23 H N N 254 LEU HXT H N N 255 LYS N N N N 256 LYS CA C N S 257 LYS C C N N 258 LYS O O N N 259 LYS CB C N N 260 LYS CG C N N 261 LYS CD C N N 262 LYS CE C N N 263 LYS NZ N N N 264 LYS OXT O N N 265 LYS H H N N 266 LYS H2 H N N 267 LYS HA H N N 268 LYS HB2 H N N 269 LYS HB3 H N N 270 LYS HG2 H N N 271 LYS HG3 H N N 272 LYS HD2 H N N 273 LYS HD3 H N N 274 LYS HE2 H N N 275 LYS HE3 H N N 276 LYS HZ1 H N N 277 LYS HZ2 H N N 278 LYS HZ3 H N N 279 LYS HXT H N N 280 MET N N N N 281 MET CA C N S 282 MET C C N N 283 MET O O N N 284 MET CB C N N 285 MET CG C N N 286 MET SD S N N 287 MET CE C N N 288 MET OXT O N N 289 MET H H N N 290 MET H2 H N N 291 MET HA H N N 292 MET HB2 H N N 293 MET HB3 H N N 294 MET HG2 H N N 295 MET HG3 H N N 296 MET HE1 H N N 297 MET HE2 H N N 298 MET HE3 H N N 299 MET HXT H N N 300 MG MG MG N N 301 PHE N N N N 302 PHE CA C N S 303 PHE C C N N 304 PHE O O N N 305 PHE CB C N N 306 PHE CG C Y N 307 PHE CD1 C Y N 308 PHE CD2 C Y N 309 PHE CE1 C Y N 310 PHE CE2 C Y N 311 PHE CZ C Y N 312 PHE OXT O N N 313 PHE H H N N 314 PHE H2 H N N 315 PHE HA H N N 316 PHE HB2 H N N 317 PHE HB3 H N N 318 PHE HD1 H N N 319 PHE HD2 H N N 320 PHE HE1 H N N 321 PHE HE2 H N N 322 PHE HZ H N N 323 PHE HXT H N N 324 PRO N N N N 325 PRO CA C N S 326 PRO C C N N 327 PRO O O N N 328 PRO CB C N N 329 PRO CG C N N 330 PRO CD C N N 331 PRO OXT O N N 332 PRO H H N N 333 PRO HA H N N 334 PRO HB2 H N N 335 PRO HB3 H N N 336 PRO HG2 H N N 337 PRO HG3 H N N 338 PRO HD2 H N N 339 PRO HD3 H N N 340 PRO HXT H N N 341 SER N N N N 342 SER CA C N S 343 SER C C N N 344 SER O O N N 345 SER CB C N N 346 SER OG O N N 347 SER OXT O N N 348 SER H H N N 349 SER H2 H N N 350 SER HA H N N 351 SER HB2 H N N 352 SER HB3 H N N 353 SER HG H N N 354 SER HXT H N N 355 THR N N N N 356 THR CA C N S 357 THR C C N N 358 THR O O N N 359 THR CB C N R 360 THR OG1 O N N 361 THR CG2 C N N 362 THR OXT O N N 363 THR H H N N 364 THR H2 H N N 365 THR HA H N N 366 THR HB H N N 367 THR HG1 H N N 368 THR HG21 H N N 369 THR HG22 H N N 370 THR HG23 H N N 371 THR HXT H N N 372 TRP N N N N 373 TRP CA C N S 374 TRP C C N N 375 TRP O O N N 376 TRP CB C N N 377 TRP CG C Y N 378 TRP CD1 C Y N 379 TRP CD2 C Y N 380 TRP NE1 N Y N 381 TRP CE2 C Y N 382 TRP CE3 C Y N 383 TRP CZ2 C Y N 384 TRP CZ3 C Y N 385 TRP CH2 C Y N 386 TRP OXT O N N 387 TRP H H N N 388 TRP H2 H N N 389 TRP HA H N N 390 TRP HB2 H N N 391 TRP HB3 H N N 392 TRP HD1 H N N 393 TRP HE1 H N N 394 TRP HE3 H N N 395 TRP HZ2 H N N 396 TRP HZ3 H N N 397 TRP HH2 H N N 398 TRP HXT H N N 399 TYR N N N N 400 TYR CA C N S 401 TYR C C N N 402 TYR O O N N 403 TYR CB C N N 404 TYR CG C Y N 405 TYR CD1 C Y N 406 TYR CD2 C Y N 407 TYR CE1 C Y N 408 TYR CE2 C Y N 409 TYR CZ C Y N 410 TYR OH O N N 411 TYR OXT O N N 412 TYR H H N N 413 TYR H2 H N N 414 TYR HA H N N 415 TYR HB2 H N N 416 TYR HB3 H N N 417 TYR HD1 H N N 418 TYR HD2 H N N 419 TYR HE1 H N N 420 TYR HE2 H N N 421 TYR HH H N N 422 TYR HXT H N N 423 VAL N N N N 424 VAL CA C N S 425 VAL C C N N 426 VAL O O N N 427 VAL CB C N N 428 VAL CG1 C N N 429 VAL CG2 C N N 430 VAL OXT O N N 431 VAL H H N N 432 VAL H2 H N N 433 VAL HA H N N 434 VAL HB H N N 435 VAL HG11 H N N 436 VAL HG12 H N N 437 VAL HG13 H N N 438 VAL HG21 H N N 439 VAL HG22 H N N 440 VAL HG23 H N N 441 VAL HXT H N N 442 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ADP PB O1B doub N N 1 ADP PB O2B sing N N 2 ADP PB O3B sing N N 3 ADP PB O3A sing N N 4 ADP O2B HOB2 sing N N 5 ADP O3B HOB3 sing N N 6 ADP PA O1A doub N N 7 ADP PA O2A sing N N 8 ADP PA O3A sing N N 9 ADP PA "O5'" sing N N 10 ADP O2A HOA2 sing N N 11 ADP "O5'" "C5'" sing N N 12 ADP "C5'" "C4'" sing N N 13 ADP "C5'" "H5'1" sing N N 14 ADP "C5'" "H5'2" sing N N 15 ADP "C4'" "O4'" sing N N 16 ADP "C4'" "C3'" sing N N 17 ADP "C4'" "H4'" sing N N 18 ADP "O4'" "C1'" sing N N 19 ADP "C3'" "O3'" sing N N 20 ADP "C3'" "C2'" sing N N 21 ADP "C3'" "H3'" sing N N 22 ADP "O3'" "HO3'" sing N N 23 ADP "C2'" "O2'" sing N N 24 ADP "C2'" "C1'" sing N N 25 ADP "C2'" "H2'" sing N N 26 ADP "O2'" "HO2'" sing N N 27 ADP "C1'" N9 sing N N 28 ADP "C1'" "H1'" sing N N 29 ADP N9 C8 sing Y N 30 ADP N9 C4 sing Y N 31 ADP C8 N7 doub Y N 32 ADP C8 H8 sing N N 33 ADP N7 C5 sing Y N 34 ADP C5 C6 sing Y N 35 ADP C5 C4 doub Y N 36 ADP C6 N6 sing N N 37 ADP C6 N1 doub Y N 38 ADP N6 HN61 sing N N 39 ADP N6 HN62 sing N N 40 ADP N1 C2 sing Y N 41 ADP C2 N3 doub Y N 42 ADP C2 H2 sing N N 43 ADP N3 C4 sing Y N 44 ALA N CA sing N N 45 ALA N H sing N N 46 ALA N H2 sing N N 47 ALA CA C sing N N 48 ALA CA CB sing N N 49 ALA CA HA sing N N 50 ALA C O doub N N 51 ALA C OXT sing N N 52 ALA CB HB1 sing N N 53 ALA CB HB2 sing N N 54 ALA CB HB3 sing N N 55 ALA OXT HXT sing N N 56 ARG N CA sing N N 57 ARG N H sing N N 58 ARG N H2 sing N N 59 ARG CA C sing N N 60 ARG CA CB sing N N 61 ARG CA HA sing N N 62 ARG C O doub N N 63 ARG C OXT sing N N 64 ARG CB CG sing N N 65 ARG CB HB2 sing N N 66 ARG CB HB3 sing N N 67 ARG CG CD sing N N 68 ARG CG HG2 sing N N 69 ARG CG HG3 sing N N 70 ARG CD NE sing N N 71 ARG CD HD2 sing N N 72 ARG CD HD3 sing N N 73 ARG NE CZ sing N N 74 ARG NE HE sing N N 75 ARG CZ NH1 sing N N 76 ARG CZ NH2 doub N N 77 ARG NH1 HH11 sing N N 78 ARG NH1 HH12 sing N N 79 ARG NH2 HH21 sing N N 80 ARG NH2 HH22 sing N N 81 ARG OXT HXT sing N N 82 ASN N CA sing N N 83 ASN N H sing N N 84 ASN N H2 sing N N 85 ASN CA C sing N N 86 ASN CA CB sing N N 87 ASN CA HA sing N N 88 ASN C O doub N N 89 ASN C OXT sing N N 90 ASN CB CG sing N N 91 ASN CB HB2 sing N N 92 ASN CB HB3 sing N N 93 ASN CG OD1 doub N N 94 ASN CG ND2 sing N N 95 ASN ND2 HD21 sing N N 96 ASN ND2 HD22 sing N N 97 ASN OXT HXT sing N N 98 ASP N CA sing N N 99 ASP N H sing N N 100 ASP N H2 sing N N 101 ASP CA C sing N N 102 ASP CA CB sing N N 103 ASP CA HA sing N N 104 ASP C O doub N N 105 ASP C OXT sing N N 106 ASP CB CG sing N N 107 ASP CB HB2 sing N N 108 ASP CB HB3 sing N N 109 ASP CG OD1 doub N N 110 ASP CG OD2 sing N N 111 ASP OD2 HD2 sing N N 112 ASP OXT HXT sing N N 113 CYS N CA sing N N 114 CYS N H sing N N 115 CYS N H2 sing N N 116 CYS CA C sing N N 117 CYS CA CB sing N N 118 CYS CA HA sing N N 119 CYS C O doub N N 120 CYS C OXT sing N N 121 CYS CB SG sing N N 122 CYS CB HB2 sing N N 123 CYS CB HB3 sing N N 124 CYS SG HG sing N N 125 CYS OXT HXT sing N N 126 EOH C1 C2 sing N N 127 EOH C1 O sing N N 128 EOH C1 H11 sing N N 129 EOH C1 H12 sing N N 130 EOH C2 H21 sing N N 131 EOH C2 H22 sing N N 132 EOH C2 H23 sing N N 133 EOH O HO sing N N 134 GLN N CA sing N N 135 GLN N H sing N N 136 GLN N H2 sing N N 137 GLN CA C sing N N 138 GLN CA CB sing N N 139 GLN CA HA sing N N 140 GLN C O doub N N 141 GLN C OXT sing N N 142 GLN CB CG sing N N 143 GLN CB HB2 sing N N 144 GLN CB HB3 sing N N 145 GLN CG CD sing N N 146 GLN CG HG2 sing N N 147 GLN CG HG3 sing N N 148 GLN CD OE1 doub N N 149 GLN CD NE2 sing N N 150 GLN NE2 HE21 sing N N 151 GLN NE2 HE22 sing N N 152 GLN OXT HXT sing N N 153 GLU N CA sing N N 154 GLU N H sing N N 155 GLU N H2 sing N N 156 GLU CA C sing N N 157 GLU CA CB sing N N 158 GLU CA HA sing N N 159 GLU C O doub N N 160 GLU C OXT sing N N 161 GLU CB CG sing N N 162 GLU CB HB2 sing N N 163 GLU CB HB3 sing N N 164 GLU CG CD sing N N 165 GLU CG HG2 sing N N 166 GLU CG HG3 sing N N 167 GLU CD OE1 doub N N 168 GLU CD OE2 sing N N 169 GLU OE2 HE2 sing N N 170 GLU OXT HXT sing N N 171 GLY N CA sing N N 172 GLY N H sing N N 173 GLY N H2 sing N N 174 GLY CA C sing N N 175 GLY CA HA2 sing N N 176 GLY CA HA3 sing N N 177 GLY C O doub N N 178 GLY C OXT sing N N 179 GLY OXT HXT sing N N 180 HIS N CA sing N N 181 HIS N H sing N N 182 HIS N H2 sing N N 183 HIS CA C sing N N 184 HIS CA CB sing N N 185 HIS CA HA sing N N 186 HIS C O doub N N 187 HIS C OXT sing N N 188 HIS CB CG sing N N 189 HIS CB HB2 sing N N 190 HIS CB HB3 sing N N 191 HIS CG ND1 sing Y N 192 HIS CG CD2 doub Y N 193 HIS ND1 CE1 doub Y N 194 HIS ND1 HD1 sing N N 195 HIS CD2 NE2 sing Y N 196 HIS CD2 HD2 sing N N 197 HIS CE1 NE2 sing Y N 198 HIS CE1 HE1 sing N N 199 HIS NE2 HE2 sing N N 200 HIS OXT HXT sing N N 201 HOH O H1 sing N N 202 HOH O H2 sing N N 203 ILE N CA sing N N 204 ILE N H sing N N 205 ILE N H2 sing N N 206 ILE CA C sing N N 207 ILE CA CB sing N N 208 ILE CA HA sing N N 209 ILE C O doub N N 210 ILE C OXT sing N N 211 ILE CB CG1 sing N N 212 ILE CB CG2 sing N N 213 ILE CB HB sing N N 214 ILE CG1 CD1 sing N N 215 ILE CG1 HG12 sing N N 216 ILE CG1 HG13 sing N N 217 ILE CG2 HG21 sing N N 218 ILE CG2 HG22 sing N N 219 ILE CG2 HG23 sing N N 220 ILE CD1 HD11 sing N N 221 ILE CD1 HD12 sing N N 222 ILE CD1 HD13 sing N N 223 ILE OXT HXT sing N N 224 LEU N CA sing N N 225 LEU N H sing N N 226 LEU N H2 sing N N 227 LEU CA C sing N N 228 LEU CA CB sing N N 229 LEU CA HA sing N N 230 LEU C O doub N N 231 LEU C OXT sing N N 232 LEU CB CG sing N N 233 LEU CB HB2 sing N N 234 LEU CB HB3 sing N N 235 LEU CG CD1 sing N N 236 LEU CG CD2 sing N N 237 LEU CG HG sing N N 238 LEU CD1 HD11 sing N N 239 LEU CD1 HD12 sing N N 240 LEU CD1 HD13 sing N N 241 LEU CD2 HD21 sing N N 242 LEU CD2 HD22 sing N N 243 LEU CD2 HD23 sing N N 244 LEU OXT HXT sing N N 245 LYS N CA sing N N 246 LYS N H sing N N 247 LYS N H2 sing N N 248 LYS CA C sing N N 249 LYS CA CB sing N N 250 LYS CA HA sing N N 251 LYS C O doub N N 252 LYS C OXT sing N N 253 LYS CB CG sing N N 254 LYS CB HB2 sing N N 255 LYS CB HB3 sing N N 256 LYS CG CD sing N N 257 LYS CG HG2 sing N N 258 LYS CG HG3 sing N N 259 LYS CD CE sing N N 260 LYS CD HD2 sing N N 261 LYS CD HD3 sing N N 262 LYS CE NZ sing N N 263 LYS CE HE2 sing N N 264 LYS CE HE3 sing N N 265 LYS NZ HZ1 sing N N 266 LYS NZ HZ2 sing N N 267 LYS NZ HZ3 sing N N 268 LYS OXT HXT sing N N 269 MET N CA sing N N 270 MET N H sing N N 271 MET N H2 sing N N 272 MET CA C sing N N 273 MET CA CB sing N N 274 MET CA HA sing N N 275 MET C O doub N N 276 MET C OXT sing N N 277 MET CB CG sing N N 278 MET CB HB2 sing N N 279 MET CB HB3 sing N N 280 MET CG SD sing N N 281 MET CG HG2 sing N N 282 MET CG HG3 sing N N 283 MET SD CE sing N N 284 MET CE HE1 sing N N 285 MET CE HE2 sing N N 286 MET CE HE3 sing N N 287 MET OXT HXT sing N N 288 PHE N CA sing N N 289 PHE N H sing N N 290 PHE N H2 sing N N 291 PHE CA C sing N N 292 PHE CA CB sing N N 293 PHE CA HA sing N N 294 PHE C O doub N N 295 PHE C OXT sing N N 296 PHE CB CG sing N N 297 PHE CB HB2 sing N N 298 PHE CB HB3 sing N N 299 PHE CG CD1 doub Y N 300 PHE CG CD2 sing Y N 301 PHE CD1 CE1 sing Y N 302 PHE CD1 HD1 sing N N 303 PHE CD2 CE2 doub Y N 304 PHE CD2 HD2 sing N N 305 PHE CE1 CZ doub Y N 306 PHE CE1 HE1 sing N N 307 PHE CE2 CZ sing Y N 308 PHE CE2 HE2 sing N N 309 PHE CZ HZ sing N N 310 PHE OXT HXT sing N N 311 PRO N CA sing N N 312 PRO N CD sing N N 313 PRO N H sing N N 314 PRO CA C sing N N 315 PRO CA CB sing N N 316 PRO CA HA sing N N 317 PRO C O doub N N 318 PRO C OXT sing N N 319 PRO CB CG sing N N 320 PRO CB HB2 sing N N 321 PRO CB HB3 sing N N 322 PRO CG CD sing N N 323 PRO CG HG2 sing N N 324 PRO CG HG3 sing N N 325 PRO CD HD2 sing N N 326 PRO CD HD3 sing N N 327 PRO OXT HXT sing N N 328 SER N CA sing N N 329 SER N H sing N N 330 SER N H2 sing N N 331 SER CA C sing N N 332 SER CA CB sing N N 333 SER CA HA sing N N 334 SER C O doub N N 335 SER C OXT sing N N 336 SER CB OG sing N N 337 SER CB HB2 sing N N 338 SER CB HB3 sing N N 339 SER OG HG sing N N 340 SER OXT HXT sing N N 341 THR N CA sing N N 342 THR N H sing N N 343 THR N H2 sing N N 344 THR CA C sing N N 345 THR CA CB sing N N 346 THR CA HA sing N N 347 THR C O doub N N 348 THR C OXT sing N N 349 THR CB OG1 sing N N 350 THR CB CG2 sing N N 351 THR CB HB sing N N 352 THR OG1 HG1 sing N N 353 THR CG2 HG21 sing N N 354 THR CG2 HG22 sing N N 355 THR CG2 HG23 sing N N 356 THR OXT HXT sing N N 357 TRP N CA sing N N 358 TRP N H sing N N 359 TRP N H2 sing N N 360 TRP CA C sing N N 361 TRP CA CB sing N N 362 TRP CA HA sing N N 363 TRP C O doub N N 364 TRP C OXT sing N N 365 TRP CB CG sing N N 366 TRP CB HB2 sing N N 367 TRP CB HB3 sing N N 368 TRP CG CD1 doub Y N 369 TRP CG CD2 sing Y N 370 TRP CD1 NE1 sing Y N 371 TRP CD1 HD1 sing N N 372 TRP CD2 CE2 doub Y N 373 TRP CD2 CE3 sing Y N 374 TRP NE1 CE2 sing Y N 375 TRP NE1 HE1 sing N N 376 TRP CE2 CZ2 sing Y N 377 TRP CE3 CZ3 doub Y N 378 TRP CE3 HE3 sing N N 379 TRP CZ2 CH2 doub Y N 380 TRP CZ2 HZ2 sing N N 381 TRP CZ3 CH2 sing Y N 382 TRP CZ3 HZ3 sing N N 383 TRP CH2 HH2 sing N N 384 TRP OXT HXT sing N N 385 TYR N CA sing N N 386 TYR N H sing N N 387 TYR N H2 sing N N 388 TYR CA C sing N N 389 TYR CA CB sing N N 390 TYR CA HA sing N N 391 TYR C O doub N N 392 TYR C OXT sing N N 393 TYR CB CG sing N N 394 TYR CB HB2 sing N N 395 TYR CB HB3 sing N N 396 TYR CG CD1 doub Y N 397 TYR CG CD2 sing Y N 398 TYR CD1 CE1 sing Y N 399 TYR CD1 HD1 sing N N 400 TYR CD2 CE2 doub Y N 401 TYR CD2 HD2 sing N N 402 TYR CE1 CZ doub Y N 403 TYR CE1 HE1 sing N N 404 TYR CE2 CZ sing Y N 405 TYR CE2 HE2 sing N N 406 TYR CZ OH sing N N 407 TYR OH HH sing N N 408 TYR OXT HXT sing N N 409 VAL N CA sing N N 410 VAL N H sing N N 411 VAL N H2 sing N N 412 VAL CA C sing N N 413 VAL CA CB sing N N 414 VAL CA HA sing N N 415 VAL C O doub N N 416 VAL C OXT sing N N 417 VAL CB CG1 sing N N 418 VAL CB CG2 sing N N 419 VAL CB HB sing N N 420 VAL CG1 HG11 sing N N 421 VAL CG1 HG12 sing N N 422 VAL CG1 HG13 sing N N 423 VAL CG2 HG21 sing N N 424 VAL CG2 HG22 sing N N 425 VAL CG2 HG23 sing N N 426 VAL OXT HXT sing N N 427 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'MAGNESIUM ION' MG 3 "ADENOSINE-5'-DIPHOSPHATE" ADP 4 ETHANOL EOH 5 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 2GXS _pdbx_initial_refinement_model.details 'PDB entry 2GXS' #