HEADER COMPLEX (THIAZOLIDINEDIONE/RECEPTOR) 14-AUG-98 2PRG TITLE LIGAND-BINDING DOMAIN OF THE HUMAN PEROXISOME PROLIFERATOR ACTIVATED TITLE 2 RECEPTOR GAMMA COMPND MOL_ID: 1; COMPND 2 MOLECULE: PEROXISOME PROLIFERATOR ACTIVATED RECEPTOR GAMMA; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: LBD (LIGAND BINDING DOMAIN), RESIDUES 207-477; COMPND 5 SYNONYM: E DOMAIN; COMPND 6 ENGINEERED: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: NUCLEAR RECEPTOR COACTIVATOR SRC-1; COMPND 9 CHAIN: C; COMPND 10 FRAGMENT: FRAGMENT CONTAINING HD1 & HD2 RESIDUES 628-703; COMPND 11 ENGINEERED: YES; COMPND 12 OTHER_DETAILS: COMPLEX WITH ROSIGLITAZONE (BRL-49653) REGISTRY # COMPND 13 122320-73-4 SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 CELLULAR_LOCATION: NUCLEUS; SOURCE 6 GENE: HUMAN PPAR GAMMA CDNA; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 9 EXPRESSION_SYSTEM_STRAIN: BL21 (DE3); SOURCE 10 EXPRESSION_SYSTEM_CELLULAR_LOCATION: CYTOPLASM; SOURCE 11 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 12 EXPRESSION_SYSTEM_PLASMID: PRSET A; SOURCE 13 EXPRESSION_SYSTEM_GENE: HPPARGAMMA; SOURCE 14 MOL_ID: 2; SOURCE 15 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 16 ORGANISM_COMMON: HUMAN; SOURCE 17 ORGANISM_TAXID: 9606; SOURCE 18 CELLULAR_LOCATION: NUCLEUS; SOURCE 19 GENE: SRC-1 CDNA; SOURCE 20 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 21 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 22 EXPRESSION_SYSTEM_STRAIN: BL21 (DE3); SOURCE 23 EXPRESSION_SYSTEM_CELLULAR_LOCATION: CYTOPLASM; SOURCE 24 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 25 EXPRESSION_SYSTEM_PLASMID: PRSET A KEYWDS COMPLEX (THIAZOLIDINEDIONE-RECEPTOR), LIGAND-BINDING DOMAIN, NUCLEAR KEYWDS 2 RECEPTOR, APO, TRANSCRIPTION FACTOR, ORPHAN RECEPTOR, COMPLEX KEYWDS 3 (THIAZOLIDINEDIONE-RECEPTOR) COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR R.T.NOLTE,G.B.WISELY,M.V.MILBURN REVDAT 4 09-AUG-23 2PRG 1 REMARK REVDAT 3 15-JAN-20 2PRG 1 REMARK REVDAT 2 24-FEB-09 2PRG 1 VERSN REVDAT 1 19-JUL-99 2PRG 0 JRNL AUTH R.T.NOLTE,G.B.WISELY,S.WESTIN,J.E.COBB,M.H.LAMBERT, JRNL AUTH 2 R.KUROKAWA,M.G.ROSENFELD,T.M.WILLSON,C.K.GLASS,M.V.MILBURN JRNL TITL LIGAND BINDING AND CO-ACTIVATOR ASSEMBLY OF THE PEROXISOME JRNL TITL 2 PROLIFERATOR-ACTIVATED RECEPTOR-GAMMA. JRNL REF NATURE V. 395 137 1998 JRNL REFN ISSN 0028-0836 JRNL PMID 9744270 JRNL DOI 10.1038/25931 REMARK 2 REMARK 2 RESOLUTION. 2.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 0.3 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.30 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 20.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 89.9 REMARK 3 NUMBER OF REFLECTIONS : 26436 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.207 REMARK 3 FREE R VALUE : 0.264 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 2.500 REMARK 3 FREE R VALUE TEST SET COUNT : 653 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.010 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 6 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.30 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.44 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 58.70 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 2745 REMARK 3 BIN R VALUE (WORKING SET) : 0.2260 REMARK 3 BIN FREE R VALUE : 0.2490 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 2.30 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 65 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.031 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4413 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 50 REMARK 3 SOLVENT ATOMS : 541 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 33.50 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 49.80 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -8.38000 REMARK 3 B22 (A**2) : -4.56000 REMARK 3 B33 (A**2) : 12.93000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.25 REMARK 3 ESD FROM SIGMAA (A) : 0.16 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.32 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.26 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.011 REMARK 3 BOND ANGLES (DEGREES) : 1.400 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 18.10 REMARK 3 IMPROPER ANGLES (DEGREES) : 0.760 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : RESTRAINED REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : 2.250 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE (A**2) : 3.480 ; 2.000 REMARK 3 SIDE-CHAIN BOND (A**2) : 6.160 ; 2.000 REMARK 3 SIDE-CHAIN ANGLE (A**2) : 7.510 ; 2.500 REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : SHRINK MASK | SHELL MODEL REMARK 3 KSOL : 0.35 REMARK 3 BSOL : 120.0 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PROTEIN_REP.PARAM REMARK 3 PARAMETER FILE 2 : WATER_REP.PARAM REMARK 3 PARAMETER FILE 3 : BSXPI_FIXDBLE.XPL REMARK 3 PARAMETER FILE 4 : LOCALPARM.XPL REMARK 3 PARAMETER FILE 5 : NULL REMARK 3 TOPOLOGY FILE 1 : PROTEIN.TOP REMARK 3 TOPOLOGY FILE 2 : WATER.TOP REMARK 3 TOPOLOGY FILE 3 : NULL REMARK 3 TOPOLOGY FILE 4 : NULL REMARK 3 TOPOLOGY FILE 5 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: BULK SOLVENT MODEL USED REMARK 4 REMARK 4 2PRG COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY BNL. REMARK 100 THE DEPOSITION ID IS D_1000178497. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : OCT-97 REMARK 200 TEMPERATURE (KELVIN) : 103 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 2 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU RU200 REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : RIGAKU REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 26501 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.300 REMARK 200 RESOLUTION RANGE LOW (A) : 20.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 89.7 REMARK 200 DATA REDUNDANCY : 3.420 REMARK 200 R MERGE (I) : 0.06100 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 20.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.30 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.44 REMARK 200 COMPLETENESS FOR SHELL (%) : 58.3 REMARK 200 DATA REDUNDANCY IN SHELL : 2.14 REMARK 200 R MERGE FOR SHELL (I) : 0.18500 REMARK 200 R SYM FOR SHELL (I) : 0.18500 REMARK 200 FOR SHELL : 4.500 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: NULL REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: CNS 0.3, X-PLOR REMARK 200 STARTING MODEL: PDB ENTRY 1PRG REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 45.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.49 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PH 7.5 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 26.10500 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 88.98300 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 34.53050 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 88.98300 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 26.10500 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 34.53050 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 890 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 13850 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -6.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2300 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 14850 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -14.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY B 239 REMARK 465 LYS B 240 REMARK 465 THR B 241 REMARK 465 THR B 242 REMARK 465 ASP B 243 REMARK 465 LYS B 244 REMARK 465 SER B 245 REMARK 465 PRO B 246 REMARK 465 PHE B 247 REMARK 465 MET B 257 REMARK 465 GLY B 258 REMARK 465 GLU B 259 REMARK 465 ASP B 260 REMARK 465 LYS B 261 REMARK 465 ILE B 262 REMARK 465 LYS B 263 REMARK 465 PHE B 264 REMARK 465 LYS B 265 REMARK 465 HIS B 266 REMARK 465 ILE B 267 REMARK 465 THR B 268 REMARK 465 PRO B 269 REMARK 465 LEU B 270 REMARK 465 GLN B 271 REMARK 465 GLU B 272 REMARK 465 ASP C 623 REMARK 465 SER C 624 REMARK 465 LYS C 625 REMARK 465 TYR C 626 REMARK 465 SER C 627 REMARK 465 ALA C 641 REMARK 465 GLU C 642 REMARK 465 GLN C 643 REMARK 465 GLN C 644 REMARK 465 LEU C 645 REMARK 465 ARG C 646 REMARK 465 HIS C 647 REMARK 465 ALA C 648 REMARK 465 ASP C 649 REMARK 465 ILE C 650 REMARK 465 ASP C 651 REMARK 465 THR C 652 REMARK 465 SER C 653 REMARK 465 CYS C 654 REMARK 465 LYS C 655 REMARK 465 ASP C 656 REMARK 465 VAL C 657 REMARK 465 LEU C 658 REMARK 465 SER C 659 REMARK 465 CYS C 660 REMARK 465 THR C 661 REMARK 465 GLY C 662 REMARK 465 THR C 663 REMARK 465 SER C 664 REMARK 465 ASN C 665 REMARK 465 SER C 666 REMARK 465 ALA C 667 REMARK 465 SER C 668 REMARK 465 ALA C 669 REMARK 465 ASN C 670 REMARK 465 SER C 671 REMARK 465 SER C 672 REMARK 465 GLY C 673 REMARK 465 GLY C 674 REMARK 465 SER C 675 REMARK 465 CYS C 676 REMARK 465 PRO C 677 REMARK 465 SER C 678 REMARK 465 SER C 679 REMARK 465 HIS C 680 REMARK 465 SER C 681 REMARK 465 SER C 682 REMARK 465 LEU C 683 REMARK 465 THR C 684 REMARK 465 THR C 704 REMARK 465 LEU C 705 REMARK 465 SER C 706 REMARK 465 VAL C 707 REMARK 465 GLU C 708 REMARK 465 PRO C 709 REMARK 465 ASP C 710 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 240 -159.18 -65.26 REMARK 500 THR A 241 100.99 40.72 REMARK 500 ASP A 243 -15.48 -167.55 REMARK 500 LYS A 244 144.60 175.83 REMARK 500 HIS A 266 173.07 -55.86 REMARK 500 PRO A 269 91.28 -55.59 REMARK 500 LEU A 270 -128.15 -139.72 REMARK 500 GLN A 273 171.96 34.51 REMARK 500 SER A 274 -0.91 126.80 REMARK 500 LYS A 358 -57.88 -6.11 REMARK 500 SER A 464 107.35 77.84 REMARK 500 ASP A 475 83.14 54.66 REMARK 500 ASP B 251 -159.57 -139.90 REMARK 500 LYS B 358 -79.30 10.75 REMARK 500 THR C 629 -86.93 49.63 REMARK 500 ARG C 686 14.79 53.98 REMARK 500 GLU C 696 -133.85 -66.83 REMARK 500 PRO C 699 -124.91 -60.75 REMARK 500 SER C 700 125.38 85.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 530 DISTANCE = 6.57 ANGSTROMS REMARK 525 HOH A 560 DISTANCE = 6.28 ANGSTROMS REMARK 525 HOH A 686 DISTANCE = 6.97 ANGSTROMS REMARK 525 HOH A 728 DISTANCE = 6.21 ANGSTROMS REMARK 525 HOH A 733 DISTANCE = 5.97 ANGSTROMS REMARK 525 HOH A 759 DISTANCE = 8.12 ANGSTROMS REMARK 525 HOH A 767 DISTANCE = 5.92 ANGSTROMS REMARK 525 HOH B 565 DISTANCE = 7.34 ANGSTROMS REMARK 525 HOH B 609 DISTANCE = 6.20 ANGSTROMS REMARK 525 HOH B 643 DISTANCE = 6.23 ANGSTROMS REMARK 525 HOH B 649 DISTANCE = 5.86 ANGSTROMS REMARK 525 HOH B 658 DISTANCE = 6.54 ANGSTROMS REMARK 525 HOH B 667 DISTANCE = 7.05 ANGSTROMS REMARK 525 HOH B 672 DISTANCE = 7.11 ANGSTROMS REMARK 525 HOH B 677 DISTANCE = 6.55 ANGSTROMS REMARK 525 HOH C 425 DISTANCE = 6.30 ANGSTROMS REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: LB1 REMARK 800 EVIDENCE_CODE: UNKNOWN REMARK 800 SITE_DESCRIPTION: THESE RESIDUES ARE INVOLVED IN LIGAND BINDING. REMARK 800 REMARK 800 SITE_IDENTIFIER: LB2 REMARK 800 EVIDENCE_CODE: UNKNOWN REMARK 800 SITE_DESCRIPTION: THESE RESIDUES ARE INVOLVED IN LIGAND BINDING. REMARK 800 REMARK 800 SITE_IDENTIFIER: CA1 REMARK 800 EVIDENCE_CODE: UNKNOWN REMARK 800 SITE_DESCRIPTION: RESIDUES INVOLVED IN BINDING THE LXXLL REMARK 800 COACTIVATOR HELIX. REMARK 800 REMARK 800 SITE_IDENTIFIER: CA2 REMARK 800 EVIDENCE_CODE: UNKNOWN REMARK 800 SITE_DESCRIPTION: RESIDUES INVOLVED IN BINDING THE COACTIVATOR REMARK 800 LXXLL HELIX. REMARK 800 REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE BRL A 1 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE BRL B 2 DBREF 2PRG A 207 477 UNP P37231 PPARG_HUMAN 205 475 DBREF 2PRG B 207 477 UNP P37231 PPARG_HUMAN 205 475 DBREF 2PRG C 623 710 UNP O43792 O43792 623 710 SEQRES 1 A 271 GLU SER ALA ASP LEU ARG ALA LEU ALA LYS HIS LEU TYR SEQRES 2 A 271 ASP SER TYR ILE LYS SER PHE PRO LEU THR LYS ALA LYS SEQRES 3 A 271 ALA ARG ALA ILE LEU THR GLY LYS THR THR ASP LYS SER SEQRES 4 A 271 PRO PHE VAL ILE TYR ASP MET ASN SER LEU MET MET GLY SEQRES 5 A 271 GLU ASP LYS ILE LYS PHE LYS HIS ILE THR PRO LEU GLN SEQRES 6 A 271 GLU GLN SER LYS GLU VAL ALA ILE ARG ILE PHE GLN GLY SEQRES 7 A 271 CYS GLN PHE ARG SER VAL GLU ALA VAL GLN GLU ILE THR SEQRES 8 A 271 GLU TYR ALA LYS SER ILE PRO GLY PHE VAL ASN LEU ASP SEQRES 9 A 271 LEU ASN ASP GLN VAL THR LEU LEU LYS TYR GLY VAL HIS SEQRES 10 A 271 GLU ILE ILE TYR THR MET LEU ALA SER LEU MET ASN LYS SEQRES 11 A 271 ASP GLY VAL LEU ILE SER GLU GLY GLN GLY PHE MET THR SEQRES 12 A 271 ARG GLU PHE LEU LYS SER LEU ARG LYS PRO PHE GLY ASP SEQRES 13 A 271 PHE MET GLU PRO LYS PHE GLU PHE ALA VAL LYS PHE ASN SEQRES 14 A 271 ALA LEU GLU LEU ASP ASP SER ASP LEU ALA ILE PHE ILE SEQRES 15 A 271 ALA VAL ILE ILE LEU SER GLY ASP ARG PRO GLY LEU LEU SEQRES 16 A 271 ASN VAL LYS PRO ILE GLU ASP ILE GLN ASP ASN LEU LEU SEQRES 17 A 271 GLN ALA LEU GLU LEU GLN LEU LYS LEU ASN HIS PRO GLU SEQRES 18 A 271 SER SER GLN LEU PHE ALA LYS LEU LEU GLN LYS MET THR SEQRES 19 A 271 ASP LEU ARG GLN ILE VAL THR GLU HIS VAL GLN LEU LEU SEQRES 20 A 271 GLN VAL ILE LYS LYS THR GLU THR ASP MET SER LEU HIS SEQRES 21 A 271 PRO LEU LEU GLN GLU ILE TYR LYS ASP LEU TYR SEQRES 1 B 271 GLU SER ALA ASP LEU ARG ALA LEU ALA LYS HIS LEU TYR SEQRES 2 B 271 ASP SER TYR ILE LYS SER PHE PRO LEU THR LYS ALA LYS SEQRES 3 B 271 ALA ARG ALA ILE LEU THR GLY LYS THR THR ASP LYS SER SEQRES 4 B 271 PRO PHE VAL ILE TYR ASP MET ASN SER LEU MET MET GLY SEQRES 5 B 271 GLU ASP LYS ILE LYS PHE LYS HIS ILE THR PRO LEU GLN SEQRES 6 B 271 GLU GLN SER LYS GLU VAL ALA ILE ARG ILE PHE GLN GLY SEQRES 7 B 271 CYS GLN PHE ARG SER VAL GLU ALA VAL GLN GLU ILE THR SEQRES 8 B 271 GLU TYR ALA LYS SER ILE PRO GLY PHE VAL ASN LEU ASP SEQRES 9 B 271 LEU ASN ASP GLN VAL THR LEU LEU LYS TYR GLY VAL HIS SEQRES 10 B 271 GLU ILE ILE TYR THR MET LEU ALA SER LEU MET ASN LYS SEQRES 11 B 271 ASP GLY VAL LEU ILE SER GLU GLY GLN GLY PHE MET THR SEQRES 12 B 271 ARG GLU PHE LEU LYS SER LEU ARG LYS PRO PHE GLY ASP SEQRES 13 B 271 PHE MET GLU PRO LYS PHE GLU PHE ALA VAL LYS PHE ASN SEQRES 14 B 271 ALA LEU GLU LEU ASP ASP SER ASP LEU ALA ILE PHE ILE SEQRES 15 B 271 ALA VAL ILE ILE LEU SER GLY ASP ARG PRO GLY LEU LEU SEQRES 16 B 271 ASN VAL LYS PRO ILE GLU ASP ILE GLN ASP ASN LEU LEU SEQRES 17 B 271 GLN ALA LEU GLU LEU GLN LEU LYS LEU ASN HIS PRO GLU SEQRES 18 B 271 SER SER GLN LEU PHE ALA LYS LEU LEU GLN LYS MET THR SEQRES 19 B 271 ASP LEU ARG GLN ILE VAL THR GLU HIS VAL GLN LEU LEU SEQRES 20 B 271 GLN VAL ILE LYS LYS THR GLU THR ASP MET SER LEU HIS SEQRES 21 B 271 PRO LEU LEU GLN GLU ILE TYR LYS ASP LEU TYR SEQRES 1 C 88 ASP SER LYS TYR SER GLN THR SER HIS LYS LEU VAL GLN SEQRES 2 C 88 LEU LEU THR THR THR ALA GLU GLN GLN LEU ARG HIS ALA SEQRES 3 C 88 ASP ILE ASP THR SER CYS LYS ASP VAL LEU SER CYS THR SEQRES 4 C 88 GLY THR SER ASN SER ALA SER ALA ASN SER SER GLY GLY SEQRES 5 C 88 SER CYS PRO SER SER HIS SER SER LEU THR GLU ARG HIS SEQRES 6 C 88 LYS ILE LEU HIS ARG LEU LEU GLN GLU GLY SER PRO SER SEQRES 7 C 88 ASP ILE THR THR LEU SER VAL GLU PRO ASP HET BRL A 1 25 HET BRL B 2 25 HETNAM BRL 2,4-THIAZOLIDIINEDIONE, 5-[[4-[2-(METHYL-2- HETNAM 2 BRL PYRIDINYLAMINO)ETHOXY]PHENYL]METHYL]-(9CL) HETSYN BRL BRL49653; ROSIGLITAZONE FORMUL 4 BRL 2(C18 H19 N3 O3 S) FORMUL 6 HOH *541(H2 O) HELIX 1 1 SER A 208 SER A 225 1 18 HELIX 2 2 LYS A 230 THR A 238 1 9 HELIX 3 3 MET A 252 PHE A 264 1 13 HELIX 4 4 VAL A 277 SER A 302 1 26 HELIX 5 5 PHE A 306 ASN A 308 5 3 HELIX 6 6 LEU A 311 LEU A 333 1 23 HELIX 7 7 ARG A 350 LEU A 353 1 4 HELIX 8 8 LYS A 358 ASP A 362 1 5 HELIX 9 9 GLU A 365 LEU A 377 1 13 HELIX 10 10 ASP A 381 ILE A 392 1 12 HELIX 11 11 VAL A 403 ASN A 424 1 22 HELIX 12 12 LEU A 431 THR A 459 1 29 HELIX 13 13 PRO A 467 TYR A 473 1 7 HELIX 14 14 SER B 208 SER B 225 1 18 HELIX 15 15 LYS B 230 LEU B 237 1 8 HELIX 16 16 MET B 252 LEU B 255 1 4 HELIX 17 17 SER B 274 SER B 302 1 29 HELIX 18 18 PHE B 306 ASN B 308 5 3 HELIX 19 19 LEU B 311 LEU B 333 1 23 HELIX 20 20 SER B 342 GLY B 344 5 3 HELIX 21 21 ARG B 350 SER B 355 1 6 HELIX 22 22 PHE B 360 ASP B 362 5 3 HELIX 23 23 GLU B 365 LEU B 377 1 13 HELIX 24 24 ASP B 381 ILE B 392 1 12 HELIX 25 25 VAL B 403 ASN B 424 1 22 HELIX 26 26 LEU B 431 THR B 459 1 29 HELIX 27 27 PRO B 467 TYR B 473 1 7 HELIX 28 28 HIS C 631 THR C 638 1 8 HELIX 29 29 LYS C 688 GLN C 695 1 8 SHEET 1 A 3 PHE A 247 ILE A 249 0 SHEET 2 A 3 GLY A 346 THR A 349 1 N PHE A 347 O PHE A 247 SHEET 3 A 3 GLY A 338 ILE A 341 -1 N ILE A 341 O GLY A 346 SHEET 1 B 2 GLY B 338 ILE B 341 0 SHEET 2 B 2 GLY B 346 THR B 349 -1 N MET B 348 O VAL B 339 SITE 1 LB1 11 HIS A 323 LEU A 469 HIS A 449 GLN A 286 SITE 2 LB1 11 TYR A 327 LEU A 330 PHE A 282 CYS A 285 SITE 3 LB1 11 ARG A 288 GLY A 338 ILE A 341 SITE 1 LB2 11 HIS B 323 LEU B 469 HIS B 449 GLN B 286 SITE 2 LB2 11 TYR B 327 LEU B 330 PHE B 282 CYS B 285 SITE 3 LB2 11 ARG B 288 GLY B 338 ILE B 341 SITE 1 CA1 8 GLU A 471 LYS A 301 THR A 297 GLN A 314 SITE 2 CA1 8 VAL A 315 LEU A 468 LEU A 318 LEU A 311 SITE 1 CA2 8 GLU B 471 LYS B 301 THR B 297 GLN B 314 SITE 2 CA2 8 VAL B 315 LEU B 468 LEU B 318 LEU B 311 SITE 1 AC1 11 PHE A 282 GLY A 284 CYS A 285 GLN A 286 SITE 2 AC1 11 SER A 289 HIS A 323 TYR A 327 ILE A 341 SITE 3 AC1 11 MET A 364 HIS A 449 TYR A 473 SITE 1 AC2 13 PHE B 282 CYS B 285 GLN B 286 SER B 289 SITE 2 AC2 13 HIS B 323 TYR B 327 LEU B 330 LEU B 340 SITE 3 AC2 13 ILE B 341 MET B 364 HIS B 449 LEU B 453 SITE 4 AC2 13 TYR B 473 CRYST1 52.210 69.061 177.966 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.019153 0.000000 0.000000 0.00000 SCALE2 0.000000 0.014480 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005619 0.00000 MTRIX1 1 -0.696300 -0.444100 0.563900 68.34460 1 MTRIX2 1 -0.522900 -0.224400 -0.822300 24.76290 1 MTRIX3 1 0.491700 -0.867400 -0.076000 -15.42090 1