data_2PUO # _entry.id 2PUO # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.287 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 2PUO RCSB RCSB042790 WWPDB D_1000042790 # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 2PU9 . unspecified PDB 2PUK . unspecified # _pdbx_database_status.entry_id 2PUO _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2007-05-09 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? # _audit_author.name 'Dai, S.' _audit_author.pdbx_ordinal 1 # _citation.id primary _citation.title 'Structural snapshots along the reaction pathway of ferredoxin-thioredoxin reductase.' _citation.journal_abbrev Nature _citation.journal_volume 448 _citation.page_first 92 _citation.page_last 96 _citation.year 2007 _citation.journal_id_ASTM NATUAS _citation.country UK _citation.journal_id_ISSN 0028-0836 _citation.journal_id_CSD 0006 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 17611542 _citation.pdbx_database_id_DOI 10.1038/nature05937 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Dai, S.' 1 primary 'Friemann, R.' 2 primary 'Glauser, D.A.' 3 primary 'Bourquin, F.' 4 primary 'Manieri, W.' 5 primary 'Schurmann, P.' 6 primary 'Eklund, H.' 7 # _cell.entry_id 2PUO _cell.length_a 44.650 _cell.length_b 53.595 _cell.length_c 79.393 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 2PUO _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Ferredoxin-thioredoxin reductase, catalytic chain' 12453.121 1 ? ? ? ? 2 polymer man 'Ferredoxin-thioredoxin reductase, variable chain' 8326.545 1 ? ? ? ? 3 non-polymer syn 'SULFATE ION' 96.063 1 ? ? ? ? 4 non-polymer syn 'IRON/SULFUR CLUSTER' 351.640 1 ? ? ? ? 5 non-polymer syn N-ETHYLMALEIMIDE 125.125 1 ? ? ? ? 6 water nat water 18.015 93 ? ? ? ? # _entity_name_com.entity_id 2 _entity_name_com.name 'FTR-V, Ferredoxin- thioredoxin reductase subunit A' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;NNKTLAAMKNFAEQYAKRTDTYFCSDLSVTAVVIEGLARHKEELGSPLCPCRHYEDKEAEVKNTFWNCPCVPMRERKECH CMLFLTPDNDFAGDAQDIPMETLEEVKAS ; ;NNKTLAAMKNFAEQYAKRTDTYFCSDLSVTAVVIEGLARHKEELGSPLCPCRHYEDKEAEVKNTFWNCPCVPMRERKECH CMLFLTPDNDFAGDAQDIPMETLEEVKAS ; A ? 2 'polypeptide(L)' no no MNVGDRVRVTSSVVVYHHPEHKKTAFDLQGMEGEVAAVLTEWQGRPISANLPVLVKFEQRFKAHFRPDEVTLI MNVGDRVRVTSSVVVYHHPEHKKTAFDLQGMEGEVAAVLTEWQGRPISANLPVLVKFEQRFKAHFRPDEVTLI B ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ASN n 1 2 ASN n 1 3 LYS n 1 4 THR n 1 5 LEU n 1 6 ALA n 1 7 ALA n 1 8 MET n 1 9 LYS n 1 10 ASN n 1 11 PHE n 1 12 ALA n 1 13 GLU n 1 14 GLN n 1 15 TYR n 1 16 ALA n 1 17 LYS n 1 18 ARG n 1 19 THR n 1 20 ASP n 1 21 THR n 1 22 TYR n 1 23 PHE n 1 24 CYS n 1 25 SER n 1 26 ASP n 1 27 LEU n 1 28 SER n 1 29 VAL n 1 30 THR n 1 31 ALA n 1 32 VAL n 1 33 VAL n 1 34 ILE n 1 35 GLU n 1 36 GLY n 1 37 LEU n 1 38 ALA n 1 39 ARG n 1 40 HIS n 1 41 LYS n 1 42 GLU n 1 43 GLU n 1 44 LEU n 1 45 GLY n 1 46 SER n 1 47 PRO n 1 48 LEU n 1 49 CYS n 1 50 PRO n 1 51 CYS n 1 52 ARG n 1 53 HIS n 1 54 TYR n 1 55 GLU n 1 56 ASP n 1 57 LYS n 1 58 GLU n 1 59 ALA n 1 60 GLU n 1 61 VAL n 1 62 LYS n 1 63 ASN n 1 64 THR n 1 65 PHE n 1 66 TRP n 1 67 ASN n 1 68 CYS n 1 69 PRO n 1 70 CYS n 1 71 VAL n 1 72 PRO n 1 73 MET n 1 74 ARG n 1 75 GLU n 1 76 ARG n 1 77 LYS n 1 78 GLU n 1 79 CYS n 1 80 HIS n 1 81 CYS n 1 82 MET n 1 83 LEU n 1 84 PHE n 1 85 LEU n 1 86 THR n 1 87 PRO n 1 88 ASP n 1 89 ASN n 1 90 ASP n 1 91 PHE n 1 92 ALA n 1 93 GLY n 1 94 ASP n 1 95 ALA n 1 96 GLN n 1 97 ASP n 1 98 ILE n 1 99 PRO n 1 100 MET n 1 101 GLU n 1 102 THR n 1 103 LEU n 1 104 GLU n 1 105 GLU n 1 106 VAL n 1 107 LYS n 1 108 ALA n 1 109 SER n 2 1 MET n 2 2 ASN n 2 3 VAL n 2 4 GLY n 2 5 ASP n 2 6 ARG n 2 7 VAL n 2 8 ARG n 2 9 VAL n 2 10 THR n 2 11 SER n 2 12 SER n 2 13 VAL n 2 14 VAL n 2 15 VAL n 2 16 TYR n 2 17 HIS n 2 18 HIS n 2 19 PRO n 2 20 GLU n 2 21 HIS n 2 22 LYS n 2 23 LYS n 2 24 THR n 2 25 ALA n 2 26 PHE n 2 27 ASP n 2 28 LEU n 2 29 GLN n 2 30 GLY n 2 31 MET n 2 32 GLU n 2 33 GLY n 2 34 GLU n 2 35 VAL n 2 36 ALA n 2 37 ALA n 2 38 VAL n 2 39 LEU n 2 40 THR n 2 41 GLU n 2 42 TRP n 2 43 GLN n 2 44 GLY n 2 45 ARG n 2 46 PRO n 2 47 ILE n 2 48 SER n 2 49 ALA n 2 50 ASN n 2 51 LEU n 2 52 PRO n 2 53 VAL n 2 54 LEU n 2 55 VAL n 2 56 LYS n 2 57 PHE n 2 58 GLU n 2 59 GLN n 2 60 ARG n 2 61 PHE n 2 62 LYS n 2 63 ALA n 2 64 HIS n 2 65 PHE n 2 66 ARG n 2 67 PRO n 2 68 ASP n 2 69 GLU n 2 70 VAL n 2 71 THR n 2 72 LEU n 2 73 ILE n # loop_ _entity_src_gen.entity_id _entity_src_gen.pdbx_src_id _entity_src_gen.pdbx_alt_source_flag _entity_src_gen.pdbx_seq_type _entity_src_gen.pdbx_beg_seq_num _entity_src_gen.pdbx_end_seq_num _entity_src_gen.gene_src_common_name _entity_src_gen.gene_src_genus _entity_src_gen.pdbx_gene_src_gene _entity_src_gen.gene_src_species _entity_src_gen.gene_src_strain _entity_src_gen.gene_src_tissue _entity_src_gen.gene_src_tissue_fraction _entity_src_gen.gene_src_details _entity_src_gen.pdbx_gene_src_fragment _entity_src_gen.pdbx_gene_src_scientific_name _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id _entity_src_gen.pdbx_gene_src_variant _entity_src_gen.pdbx_gene_src_cell_line _entity_src_gen.pdbx_gene_src_atcc _entity_src_gen.pdbx_gene_src_organ _entity_src_gen.pdbx_gene_src_organelle _entity_src_gen.pdbx_gene_src_cell _entity_src_gen.pdbx_gene_src_cellular_location _entity_src_gen.host_org_common_name _entity_src_gen.pdbx_host_org_scientific_name _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id _entity_src_gen.host_org_genus _entity_src_gen.pdbx_host_org_gene _entity_src_gen.pdbx_host_org_organ _entity_src_gen.host_org_species _entity_src_gen.pdbx_host_org_tissue _entity_src_gen.pdbx_host_org_tissue_fraction _entity_src_gen.pdbx_host_org_strain _entity_src_gen.pdbx_host_org_variant _entity_src_gen.pdbx_host_org_cell_line _entity_src_gen.pdbx_host_org_atcc _entity_src_gen.pdbx_host_org_culture_collection _entity_src_gen.pdbx_host_org_cell _entity_src_gen.pdbx_host_org_organelle _entity_src_gen.pdbx_host_org_cellular_location _entity_src_gen.pdbx_host_org_vector_type _entity_src_gen.pdbx_host_org_vector _entity_src_gen.host_org_details _entity_src_gen.expression_system_id _entity_src_gen.plasmid_name _entity_src_gen.plasmid_details _entity_src_gen.pdbx_description 1 1 sample ? ? ? ? Synechocystis ftrC ? ? ? ? ? ? 'Synechocystis sp.' 1143 ? ? ? ? ? ? ? ? 'Escherichia coli BL21' 511693 Escherichia ? ? 'Escherichia coli' ? ? BL21 ? ? ? ? ? ? ? Plasmid ? ? ? pET-3C ? ? 2 1 sample ? ? ? ? Synechocystis ftrV ? ? ? ? ? ? 'Synechocystis sp.' 1143 ? ? ? ? ? ? ? ? 'Escherichia coli BL21' 511693 Escherichia ? ? 'Escherichia coli' ? ? BL21 ? ? ? ? ? ? ? Plasmid ? ? ? pET-3C ? ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform 1 UNP Q55389_SYNY3 Q55389 1 ;NNKTLAAMKNFAEQYAKRTDTYFCSDLSVTAVVIEGLARHKEELGSPLCPCRHYEDKEAEVKNTFWNCPCVPMRERKECH CMLFLTPDNDFAGDAQDIPMETLEEVKAS ; 8 ? 2 UNP FTRV_SYNY3 Q55781 2 MNVGDRVRVTSSVVVYHHPEHKKTAFDLQGMEGEVAAVLTEWQGRPISANLPVLVKFEQRFKAHFRPDEVTLI 1 ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 2PUO A 1 ? 109 ? Q55389 8 ? 116 ? 7 115 2 2 2PUO B 1 ? 73 ? Q55781 1 ? 73 ? 1 73 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 NEQ non-polymer . N-ETHYLMALEIMIDE ? 'C6 H7 N O2' 125.125 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 SF4 non-polymer . 'IRON/SULFUR CLUSTER' ? 'Fe4 S4' 351.640 SO4 non-polymer . 'SULFATE ION' ? 'O4 S -2' 96.063 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.crystals_number 1 _exptl.entry_id 2PUO _exptl.method 'X-RAY DIFFRACTION' # _exptl_crystal.id 1 _exptl_crystal.density_Matthews 2.28 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 46.16 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.pH 5.4 _exptl_crystal_grow.temp 298 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_details 'pH 5.4, VAPOR DIFFUSION, HANGING DROP, temperature 298K' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 210' _diffrn_detector.pdbx_collection_date 2004-01-01 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.0781 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'ALS BEAMLINE 8.2.1' _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.0781 _diffrn_source.pdbx_synchrotron_site ALS _diffrn_source.pdbx_synchrotron_beamline 8.2.1 # _reflns.entry_id 2PUO _reflns.d_resolution_high 1.700 _reflns.d_resolution_low 50.000 _reflns.number_obs 20362 _reflns.pdbx_Rmerge_I_obs 0.060 _reflns.pdbx_netI_over_sigmaI 18.300 _reflns.pdbx_chi_squared 1.400 _reflns.percent_possible_obs 93.900 _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.number_all ? _reflns.pdbx_Rsym_value ? _reflns.B_iso_Wilson_estimate 26.98 _reflns.pdbx_redundancy 6.6 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.number_measured_obs _reflns_shell.number_measured_all _reflns_shell.number_unique_obs _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_redundancy _reflns_shell.percent_possible_obs _reflns_shell.number_unique_all _reflns_shell.percent_possible_all _reflns_shell.pdbx_diffrn_id _reflns_shell.pdbx_ordinal 1.70 1.76 ? ? ? 0.500 ? ? 1.035 ? ? 1282 60.60 ? 1 1.76 1.83 ? ? ? 0.426 ? ? 1.083 ? ? 1790 84.70 ? 2 1.83 1.91 ? ? ? 0.369 ? ? 1.221 ? ? 2074 96.90 ? 3 1.91 2.02 ? ? ? 0.258 ? ? 1.367 ? ? 2120 98.90 ? 4 2.02 2.14 ? ? ? 0.172 ? ? 1.484 ? ? 2126 99.10 ? 5 2.14 2.31 ? ? ? 0.123 ? ? 1.547 ? ? 2127 99.30 ? 6 2.31 2.54 ? ? ? 0.092 ? ? 1.605 ? ? 2153 99.70 ? 7 2.54 2.91 ? ? ? 0.069 ? ? 1.576 ? ? 2182 100.00 ? 8 2.91 3.66 ? ? ? 0.046 ? ? 1.389 ? ? 2211 100.00 ? 9 3.66 50.00 ? ? ? 0.042 ? ? 1.306 ? ? 2297 98.30 ? 10 # _refine.entry_id 2PUO _refine.ls_d_res_high 1.700 _refine.ls_d_res_low 500.000 _refine.pdbx_ls_sigma_F 0.00 _refine.ls_percent_reflns_obs 94.000 _refine.ls_number_reflns_obs 20302 _refine.ls_R_factor_R_work 0.234 _refine.ls_R_factor_R_free 0.255 _refine.ls_percent_reflns_R_free 4.600 _refine.ls_number_reflns_R_free 986 _refine.B_iso_mean 40.528 _refine.solvent_model_param_bsol 51.279 _refine.aniso_B[1][1] -5.809 _refine.aniso_B[2][2] -7.452 _refine.aniso_B[3][3] 13.261 _refine.aniso_B[1][2] 0.000 _refine.aniso_B[1][3] 0.000 _refine.aniso_B[2][3] 0.000 _refine.pdbx_ls_sigma_I ? _refine.ls_number_reflns_all ? _refine.ls_R_factor_all ? _refine.ls_R_factor_obs ? _refine.ls_redundancy_reflns_obs ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model ? _refine.pdbx_ls_cross_valid_method ? _refine.pdbx_R_Free_selection_details 'Random 5%' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_stereochemistry_target_values ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.pdbx_isotropic_thermal_model ? _refine.details ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_overall_ESU_R ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 2PUO _refine_analyze.Luzzati_coordinate_error_obs 0.26 _refine_analyze.Luzzati_sigma_a_obs 0.28 _refine_analyze.Luzzati_d_res_low_obs 5.00 _refine_analyze.Luzzati_coordinate_error_free 0.30 _refine_analyze.Luzzati_sigma_a_free 0.30 _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.pdbx_Luzzati_d_res_high_obs ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1453 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 22 _refine_hist.number_atoms_solvent 93 _refine_hist.number_atoms_total 1568 _refine_hist.d_res_high 1.700 _refine_hist.d_res_low 500.000 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function c_angle_deg ? 1.1 1.500 ? 'X-RAY DIFFRACTION' ? c_bond_d ? 0.005 2.000 ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d ? 22.7 2.000 ? 'X-RAY DIFFRACTION' ? c_scangle_it ? 0.73 2.500 ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.d_res_high 1.70 _refine_ls_shell.d_res_low 1.81 _refine_ls_shell.number_reflns_obs 2316 _refine_ls_shell.number_reflns_R_free 116 _refine_ls_shell.R_factor_R_work 0.355 _refine_ls_shell.R_factor_R_free 0.394 _refine_ls_shell.R_factor_R_free_error 0.037 _refine_ls_shell.percent_reflns_obs 68.9 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.pdbx_total_number_of_bins_used ? _refine_ls_shell.number_reflns_R_work ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # loop_ _pdbx_xplor_file.serial_no _pdbx_xplor_file.param_file _pdbx_xplor_file.topol_file _pdbx_xplor_file.pdbx_refine_id 1 CNS_TOPPAR:protein_rep.param ? 'X-RAY DIFFRACTION' 2 CNS_TOPPAR:water_rep.param ? 'X-RAY DIFFRACTION' 3 CNS_TOPPAR:ion.param ? 'X-RAY DIFFRACTION' 4 fs4.par ? 'X-RAY DIFFRACTION' 5 neq.par ? 'X-RAY DIFFRACTION' # _struct.entry_id 2PUO _struct.title 'Crystal srtucture of the NEM modified ferredoxin:thioredoxin reductase' _struct.pdbx_descriptor 'Ferredoxin-thioredoxin reductase, catalytic chain, Ferredoxin-thioredoxin reductase, variable chain' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2PUO _struct_keywords.pdbx_keywords 'ELECTRON TRANSPORT' _struct_keywords.text 'Thioredoxin, redox, iron-sulfur, ELECTRON TRANSPORT' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? F N N 6 ? G N N 6 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ASN A 1 ? ASP A 20 ? ASN A 7 ASP A 26 1 ? 20 HELX_P HELX_P2 2 ASP A 26 ? GLY A 45 ? ASP A 32 GLY A 51 1 ? 20 HELX_P HELX_P3 3 ASP A 56 ? THR A 64 ? ASP A 62 THR A 70 1 ? 9 HELX_P HELX_P4 4 CYS A 70 ? LYS A 77 ? CYS A 76 LYS A 83 1 ? 8 HELX_P HELX_P5 5 PRO A 99 ? ALA A 108 ? PRO A 105 ALA A 114 1 ? 10 HELX_P HELX_P6 6 HIS B 18 ? LYS B 22 ? HIS B 18 LYS B 22 5 ? 5 HELX_P HELX_P7 7 ARG B 66 ? ASP B 68 ? ARG B 66 ASP B 68 5 ? 3 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc1 metalc ? ? A CYS 49 SG ? ? ? 1_555 D SF4 . FE4 ? ? A CYS 55 A SF4 202 1_555 ? ? ? ? ? ? ? 2.583 ? metalc2 metalc ? ? A CYS 68 SG ? ? ? 1_555 D SF4 . FE1 ? ? A CYS 74 A SF4 202 1_555 ? ? ? ? ? ? ? 2.376 ? metalc3 metalc ? ? A CYS 70 SG ? ? ? 1_555 D SF4 . FE2 ? ? A CYS 76 A SF4 202 1_555 ? ? ? ? ? ? ? 2.414 ? metalc4 metalc ? ? A CYS 79 SG ? ? ? 1_555 D SF4 . FE3 ? ? A CYS 85 A SF4 202 1_555 ? ? ? ? ? ? ? 2.390 ? covale1 covale ? ? A CYS 51 SG ? ? ? 1_555 E NEQ . C3 ? ? A CYS 57 A NEQ 301 1_555 ? ? ? ? ? ? ? 1.858 ? metalc5 metalc ? ? D SF4 . FE4 ? ? ? 1_555 A CYS 81 SG ? ? A SF4 202 A CYS 87 1_555 ? ? ? ? ? ? ? 2.723 ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference metalc ? ? covale ? ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id CYS _struct_mon_prot_cis.label_seq_id 68 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id CYS _struct_mon_prot_cis.auth_seq_id 74 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 69 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 75 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle -0.21 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 5 ? B ? 2 ? C ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel B 1 2 ? anti-parallel C 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 PHE B 61 ? PHE B 65 ? PHE B 61 PHE B 65 A 2 VAL B 53 ? PHE B 57 ? VAL B 53 PHE B 57 A 3 GLU B 32 ? VAL B 38 ? GLU B 32 VAL B 38 A 4 ARG B 6 ? VAL B 9 ? ARG B 6 VAL B 9 A 5 VAL B 70 ? LEU B 72 ? VAL B 70 LEU B 72 B 1 VAL B 14 ? VAL B 15 ? VAL B 14 VAL B 15 B 2 PHE B 26 ? ASP B 27 ? PHE B 26 ASP B 27 C 1 GLU B 41 ? TRP B 42 ? GLU B 41 TRP B 42 C 2 ARG B 45 ? PRO B 46 ? ARG B 45 PRO B 46 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O PHE B 61 ? O PHE B 61 N PHE B 57 ? N PHE B 57 A 2 3 O LEU B 54 ? O LEU B 54 N ALA B 36 ? N ALA B 36 A 3 4 O GLY B 33 ? O GLY B 33 N VAL B 7 ? N VAL B 7 A 4 5 N ARG B 8 ? N ARG B 8 O THR B 71 ? O THR B 71 B 1 2 N VAL B 15 ? N VAL B 15 O PHE B 26 ? O PHE B 26 C 1 2 N TRP B 42 ? N TRP B 42 O ARG B 45 ? O ARG B 45 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software ? ? ? ? 5 'BINDING SITE FOR RESIDUE SO4 A 201' AC2 Software ? ? ? ? 7 'BINDING SITE FOR RESIDUE SF4 A 202' AC3 Software ? ? ? ? 6 'BINDING SITE FOR RESIDUE NEQ A 301' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 5 ARG A 74 ? ARG A 80 . ? 1_555 ? 2 AC1 5 HOH F . ? HOH A 332 . ? 1_555 ? 3 AC1 5 HOH F . ? HOH A 352 . ? 1_555 ? 4 AC1 5 LYS B 62 ? LYS B 62 . ? 1_555 ? 5 AC1 5 HIS B 64 ? HIS B 64 . ? 1_555 ? 6 AC2 7 CYS A 49 ? CYS A 55 . ? 1_555 ? 7 AC2 7 CYS A 68 ? CYS A 74 . ? 1_555 ? 8 AC2 7 CYS A 70 ? CYS A 76 . ? 1_555 ? 9 AC2 7 MET A 73 ? MET A 79 . ? 1_555 ? 10 AC2 7 CYS A 79 ? CYS A 85 . ? 1_555 ? 11 AC2 7 HIS A 80 ? HIS A 86 . ? 1_555 ? 12 AC2 7 CYS A 81 ? CYS A 87 . ? 1_555 ? 13 AC3 6 VAL A 29 ? VAL A 35 . ? 1_555 ? 14 AC3 6 CYS A 51 ? CYS A 57 . ? 1_555 ? 15 AC3 6 CYS A 81 ? CYS A 87 . ? 1_555 ? 16 AC3 6 MET B 1 ? MET B 1 . ? 4_455 ? 17 AC3 6 ASN B 2 ? ASN B 2 . ? 4_455 ? 18 AC3 6 VAL B 38 ? VAL B 38 . ? 4_455 ? # _atom_sites.entry_id 2PUO _atom_sites.fract_transf_matrix[1][1] 0.022396 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.018658 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.012596 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C FE N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ASN 1 7 7 ASN ASN A . n A 1 2 ASN 2 8 8 ASN ASN A . n A 1 3 LYS 3 9 9 LYS LYS A . n A 1 4 THR 4 10 10 THR THR A . n A 1 5 LEU 5 11 11 LEU LEU A . n A 1 6 ALA 6 12 12 ALA ALA A . n A 1 7 ALA 7 13 13 ALA ALA A . n A 1 8 MET 8 14 14 MET MET A . n A 1 9 LYS 9 15 15 LYS LYS A . n A 1 10 ASN 10 16 16 ASN ASN A . n A 1 11 PHE 11 17 17 PHE PHE A . n A 1 12 ALA 12 18 18 ALA ALA A . n A 1 13 GLU 13 19 19 GLU GLU A . n A 1 14 GLN 14 20 20 GLN GLN A . n A 1 15 TYR 15 21 21 TYR TYR A . n A 1 16 ALA 16 22 22 ALA ALA A . n A 1 17 LYS 17 23 23 LYS LYS A . n A 1 18 ARG 18 24 24 ARG ARG A . n A 1 19 THR 19 25 25 THR THR A . n A 1 20 ASP 20 26 26 ASP ASP A . n A 1 21 THR 21 27 27 THR THR A . n A 1 22 TYR 22 28 28 TYR TYR A . n A 1 23 PHE 23 29 29 PHE PHE A . n A 1 24 CYS 24 30 30 CYS CYS A . n A 1 25 SER 25 31 31 SER SER A . n A 1 26 ASP 26 32 32 ASP ASP A . n A 1 27 LEU 27 33 33 LEU LEU A . n A 1 28 SER 28 34 34 SER SER A . n A 1 29 VAL 29 35 35 VAL VAL A . n A 1 30 THR 30 36 36 THR THR A . n A 1 31 ALA 31 37 37 ALA ALA A . n A 1 32 VAL 32 38 38 VAL VAL A . n A 1 33 VAL 33 39 39 VAL VAL A . n A 1 34 ILE 34 40 40 ILE ILE A . n A 1 35 GLU 35 41 41 GLU GLU A . n A 1 36 GLY 36 42 42 GLY GLY A . n A 1 37 LEU 37 43 43 LEU LEU A . n A 1 38 ALA 38 44 44 ALA ALA A . n A 1 39 ARG 39 45 45 ARG ARG A . n A 1 40 HIS 40 46 46 HIS HIS A . n A 1 41 LYS 41 47 47 LYS LYS A . n A 1 42 GLU 42 48 48 GLU GLU A . n A 1 43 GLU 43 49 49 GLU GLU A . n A 1 44 LEU 44 50 50 LEU LEU A . n A 1 45 GLY 45 51 51 GLY GLY A . n A 1 46 SER 46 52 52 SER SER A . n A 1 47 PRO 47 53 53 PRO PRO A . n A 1 48 LEU 48 54 54 LEU LEU A . n A 1 49 CYS 49 55 55 CYS CYS A . n A 1 50 PRO 50 56 56 PRO PRO A . n A 1 51 CYS 51 57 57 CYS CYS A . n A 1 52 ARG 52 58 58 ARG ARG A . n A 1 53 HIS 53 59 59 HIS HIS A . n A 1 54 TYR 54 60 60 TYR TYR A . n A 1 55 GLU 55 61 61 GLU GLU A . n A 1 56 ASP 56 62 62 ASP ASP A . n A 1 57 LYS 57 63 63 LYS LYS A . n A 1 58 GLU 58 64 64 GLU GLU A . n A 1 59 ALA 59 65 65 ALA ALA A . n A 1 60 GLU 60 66 66 GLU GLU A . n A 1 61 VAL 61 67 67 VAL VAL A . n A 1 62 LYS 62 68 68 LYS LYS A . n A 1 63 ASN 63 69 69 ASN ASN A . n A 1 64 THR 64 70 70 THR THR A . n A 1 65 PHE 65 71 71 PHE PHE A . n A 1 66 TRP 66 72 72 TRP TRP A . n A 1 67 ASN 67 73 73 ASN ASN A . n A 1 68 CYS 68 74 74 CYS CYS A . n A 1 69 PRO 69 75 75 PRO PRO A . n A 1 70 CYS 70 76 76 CYS CYS A . n A 1 71 VAL 71 77 77 VAL VAL A . n A 1 72 PRO 72 78 78 PRO PRO A . n A 1 73 MET 73 79 79 MET MET A . n A 1 74 ARG 74 80 80 ARG ARG A . n A 1 75 GLU 75 81 81 GLU GLU A . n A 1 76 ARG 76 82 82 ARG ARG A . n A 1 77 LYS 77 83 83 LYS LYS A . n A 1 78 GLU 78 84 84 GLU GLU A . n A 1 79 CYS 79 85 85 CYS CYS A . n A 1 80 HIS 80 86 86 HIS HIS A . n A 1 81 CYS 81 87 87 CYS CYS A . n A 1 82 MET 82 88 88 MET MET A . n A 1 83 LEU 83 89 89 LEU LEU A . n A 1 84 PHE 84 90 90 PHE PHE A . n A 1 85 LEU 85 91 91 LEU LEU A . n A 1 86 THR 86 92 92 THR THR A . n A 1 87 PRO 87 93 93 PRO PRO A . n A 1 88 ASP 88 94 94 ASP ASP A . n A 1 89 ASN 89 95 95 ASN ASN A . n A 1 90 ASP 90 96 96 ASP ASP A . n A 1 91 PHE 91 97 97 PHE PHE A . n A 1 92 ALA 92 98 98 ALA ALA A . n A 1 93 GLY 93 99 99 GLY GLY A . n A 1 94 ASP 94 100 100 ASP ASP A . n A 1 95 ALA 95 101 101 ALA ALA A . n A 1 96 GLN 96 102 102 GLN GLN A . n A 1 97 ASP 97 103 103 ASP ASP A . n A 1 98 ILE 98 104 104 ILE ILE A . n A 1 99 PRO 99 105 105 PRO PRO A . n A 1 100 MET 100 106 106 MET MET A . n A 1 101 GLU 101 107 107 GLU GLU A . n A 1 102 THR 102 108 108 THR THR A . n A 1 103 LEU 103 109 109 LEU LEU A . n A 1 104 GLU 104 110 110 GLU GLU A . n A 1 105 GLU 105 111 111 GLU GLU A . n A 1 106 VAL 106 112 112 VAL VAL A . n A 1 107 LYS 107 113 113 LYS LYS A . n A 1 108 ALA 108 114 114 ALA ALA A . n A 1 109 SER 109 115 115 SER SER A . n B 2 1 MET 1 1 1 MET MET B . n B 2 2 ASN 2 2 2 ASN ASN B . n B 2 3 VAL 3 3 3 VAL VAL B . n B 2 4 GLY 4 4 4 GLY GLY B . n B 2 5 ASP 5 5 5 ASP ASP B . n B 2 6 ARG 6 6 6 ARG ARG B . n B 2 7 VAL 7 7 7 VAL VAL B . n B 2 8 ARG 8 8 8 ARG ARG B . n B 2 9 VAL 9 9 9 VAL VAL B . n B 2 10 THR 10 10 10 THR THR B . n B 2 11 SER 11 11 11 SER SER B . n B 2 12 SER 12 12 12 SER SER B . n B 2 13 VAL 13 13 13 VAL VAL B . n B 2 14 VAL 14 14 14 VAL VAL B . n B 2 15 VAL 15 15 15 VAL VAL B . n B 2 16 TYR 16 16 16 TYR TYR B . n B 2 17 HIS 17 17 17 HIS HIS B . n B 2 18 HIS 18 18 18 HIS HIS B . n B 2 19 PRO 19 19 19 PRO PRO B . n B 2 20 GLU 20 20 20 GLU GLU B . n B 2 21 HIS 21 21 21 HIS HIS B . n B 2 22 LYS 22 22 22 LYS LYS B . n B 2 23 LYS 23 23 23 LYS LYS B . n B 2 24 THR 24 24 24 THR THR B . n B 2 25 ALA 25 25 25 ALA ALA B . n B 2 26 PHE 26 26 26 PHE PHE B . n B 2 27 ASP 27 27 27 ASP ASP B . n B 2 28 LEU 28 28 28 LEU LEU B . n B 2 29 GLN 29 29 29 GLN GLN B . n B 2 30 GLY 30 30 30 GLY GLY B . n B 2 31 MET 31 31 31 MET MET B . n B 2 32 GLU 32 32 32 GLU GLU B . n B 2 33 GLY 33 33 33 GLY GLY B . n B 2 34 GLU 34 34 34 GLU GLU B . n B 2 35 VAL 35 35 35 VAL VAL B . n B 2 36 ALA 36 36 36 ALA ALA B . n B 2 37 ALA 37 37 37 ALA ALA B . n B 2 38 VAL 38 38 38 VAL VAL B . n B 2 39 LEU 39 39 39 LEU LEU B . n B 2 40 THR 40 40 40 THR THR B . n B 2 41 GLU 41 41 41 GLU GLU B . n B 2 42 TRP 42 42 42 TRP TRP B . n B 2 43 GLN 43 43 43 GLN GLN B . n B 2 44 GLY 44 44 44 GLY GLY B . n B 2 45 ARG 45 45 45 ARG ARG B . n B 2 46 PRO 46 46 46 PRO PRO B . n B 2 47 ILE 47 47 47 ILE ILE B . n B 2 48 SER 48 48 48 SER SER B . n B 2 49 ALA 49 49 49 ALA ALA B . n B 2 50 ASN 50 50 50 ASN ASN B . n B 2 51 LEU 51 51 51 LEU LEU B . n B 2 52 PRO 52 52 52 PRO PRO B . n B 2 53 VAL 53 53 53 VAL VAL B . n B 2 54 LEU 54 54 54 LEU LEU B . n B 2 55 VAL 55 55 55 VAL VAL B . n B 2 56 LYS 56 56 56 LYS LYS B . n B 2 57 PHE 57 57 57 PHE PHE B . n B 2 58 GLU 58 58 58 GLU GLU B . n B 2 59 GLN 59 59 59 GLN GLN B . n B 2 60 ARG 60 60 60 ARG ARG B . n B 2 61 PHE 61 61 61 PHE PHE B . n B 2 62 LYS 62 62 62 LYS LYS B . n B 2 63 ALA 63 63 63 ALA ALA B . n B 2 64 HIS 64 64 64 HIS HIS B . n B 2 65 PHE 65 65 65 PHE PHE B . n B 2 66 ARG 66 66 66 ARG ARG B . n B 2 67 PRO 67 67 67 PRO PRO B . n B 2 68 ASP 68 68 68 ASP ASP B . n B 2 69 GLU 69 69 69 GLU GLU B . n B 2 70 VAL 70 70 70 VAL VAL B . n B 2 71 THR 71 71 71 THR THR B . n B 2 72 LEU 72 72 72 LEU LEU B . n B 2 73 ILE 73 73 73 ILE ILE B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 SO4 1 201 201 SO4 SO4 A . D 4 SF4 1 202 100 SF4 SF4 A . E 5 NEQ 1 301 301 NEQ NEQ A . F 6 HOH 1 302 1 HOH HOH A . F 6 HOH 2 303 2 HOH HOH A . F 6 HOH 3 304 3 HOH HOH A . F 6 HOH 4 305 4 HOH HOH A . F 6 HOH 5 306 5 HOH HOH A . F 6 HOH 6 307 7 HOH HOH A . F 6 HOH 7 308 8 HOH HOH A . F 6 HOH 8 309 9 HOH HOH A . F 6 HOH 9 310 10 HOH HOH A . F 6 HOH 10 311 11 HOH HOH A . F 6 HOH 11 312 12 HOH HOH A . F 6 HOH 12 313 14 HOH HOH A . F 6 HOH 13 314 15 HOH HOH A . F 6 HOH 14 315 17 HOH HOH A . F 6 HOH 15 316 18 HOH HOH A . F 6 HOH 16 317 19 HOH HOH A . F 6 HOH 17 318 20 HOH HOH A . F 6 HOH 18 319 21 HOH HOH A . F 6 HOH 19 320 22 HOH HOH A . F 6 HOH 20 321 23 HOH HOH A . F 6 HOH 21 322 24 HOH HOH A . F 6 HOH 22 323 25 HOH HOH A . F 6 HOH 23 324 26 HOH HOH A . F 6 HOH 24 325 30 HOH HOH A . F 6 HOH 25 326 31 HOH HOH A . F 6 HOH 26 327 32 HOH HOH A . F 6 HOH 27 328 33 HOH HOH A . F 6 HOH 28 329 34 HOH HOH A . F 6 HOH 29 330 35 HOH HOH A . F 6 HOH 30 331 37 HOH HOH A . F 6 HOH 31 332 38 HOH HOH A . F 6 HOH 32 333 39 HOH HOH A . F 6 HOH 33 334 41 HOH HOH A . F 6 HOH 34 335 44 HOH HOH A . F 6 HOH 35 336 45 HOH HOH A . F 6 HOH 36 337 55 HOH HOH A . F 6 HOH 37 338 56 HOH HOH A . F 6 HOH 38 339 57 HOH HOH A . F 6 HOH 39 340 58 HOH HOH A . F 6 HOH 40 341 60 HOH HOH A . F 6 HOH 41 342 61 HOH HOH A . F 6 HOH 42 343 62 HOH HOH A . F 6 HOH 43 344 63 HOH HOH A . F 6 HOH 44 345 68 HOH HOH A . F 6 HOH 45 346 69 HOH HOH A . F 6 HOH 46 347 70 HOH HOH A . F 6 HOH 47 348 71 HOH HOH A . F 6 HOH 48 349 72 HOH HOH A . F 6 HOH 49 350 73 HOH HOH A . F 6 HOH 50 351 74 HOH HOH A . F 6 HOH 51 352 75 HOH HOH A . F 6 HOH 52 353 77 HOH HOH A . F 6 HOH 53 354 79 HOH HOH A . F 6 HOH 54 355 80 HOH HOH A . F 6 HOH 55 356 82 HOH HOH A . F 6 HOH 56 357 83 HOH HOH A . F 6 HOH 57 358 84 HOH HOH A . F 6 HOH 58 359 85 HOH HOH A . F 6 HOH 59 360 86 HOH HOH A . F 6 HOH 60 361 87 HOH HOH A . F 6 HOH 61 362 88 HOH HOH A . F 6 HOH 62 363 89 HOH HOH A . G 6 HOH 1 74 6 HOH HOH B . G 6 HOH 2 75 13 HOH HOH B . G 6 HOH 3 76 16 HOH HOH B . G 6 HOH 4 77 27 HOH HOH B . G 6 HOH 5 78 28 HOH HOH B . G 6 HOH 6 79 29 HOH HOH B . G 6 HOH 7 80 36 HOH HOH B . G 6 HOH 8 81 40 HOH HOH B . G 6 HOH 9 82 42 HOH HOH B . G 6 HOH 10 83 43 HOH HOH B . G 6 HOH 11 84 46 HOH HOH B . G 6 HOH 12 85 47 HOH HOH B . G 6 HOH 13 86 48 HOH HOH B . G 6 HOH 14 87 49 HOH HOH B . G 6 HOH 15 88 50 HOH HOH B . G 6 HOH 16 89 51 HOH HOH B . G 6 HOH 17 90 52 HOH HOH B . G 6 HOH 18 91 53 HOH HOH B . G 6 HOH 19 92 54 HOH HOH B . G 6 HOH 20 93 59 HOH HOH B . G 6 HOH 21 94 64 HOH HOH B . G 6 HOH 22 95 65 HOH HOH B . G 6 HOH 23 96 66 HOH HOH B . G 6 HOH 24 97 67 HOH HOH B . G 6 HOH 25 98 76 HOH HOH B . G 6 HOH 26 99 78 HOH HOH B . G 6 HOH 27 100 81 HOH HOH B . G 6 HOH 28 101 91 HOH HOH B . G 6 HOH 29 102 92 HOH HOH B . G 6 HOH 30 103 93 HOH HOH B . G 6 HOH 31 104 95 HOH HOH B . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 2530 ? 1 MORE -40 ? 1 'SSA (A^2)' 9660 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 SG ? A CYS 49 ? A CYS 55 ? 1_555 FE4 ? D SF4 . ? A SF4 202 ? 1_555 S1 ? D SF4 . ? A SF4 202 ? 1_555 108.3 ? 2 SG ? A CYS 49 ? A CYS 55 ? 1_555 FE4 ? D SF4 . ? A SF4 202 ? 1_555 S2 ? D SF4 . ? A SF4 202 ? 1_555 139.9 ? 3 S1 ? D SF4 . ? A SF4 202 ? 1_555 FE4 ? D SF4 . ? A SF4 202 ? 1_555 S2 ? D SF4 . ? A SF4 202 ? 1_555 102.9 ? 4 SG ? A CYS 49 ? A CYS 55 ? 1_555 FE4 ? D SF4 . ? A SF4 202 ? 1_555 S3 ? D SF4 . ? A SF4 202 ? 1_555 93.8 ? 5 S1 ? D SF4 . ? A SF4 202 ? 1_555 FE4 ? D SF4 . ? A SF4 202 ? 1_555 S3 ? D SF4 . ? A SF4 202 ? 1_555 106.2 ? 6 S2 ? D SF4 . ? A SF4 202 ? 1_555 FE4 ? D SF4 . ? A SF4 202 ? 1_555 S3 ? D SF4 . ? A SF4 202 ? 1_555 101.1 ? 7 SG ? A CYS 49 ? A CYS 55 ? 1_555 FE4 ? D SF4 . ? A SF4 202 ? 1_555 SG ? A CYS 81 ? A CYS 87 ? 1_555 68.8 ? 8 S1 ? D SF4 . ? A SF4 202 ? 1_555 FE4 ? D SF4 . ? A SF4 202 ? 1_555 SG ? A CYS 81 ? A CYS 87 ? 1_555 95.4 ? 9 S2 ? D SF4 . ? A SF4 202 ? 1_555 FE4 ? D SF4 . ? A SF4 202 ? 1_555 SG ? A CYS 81 ? A CYS 87 ? 1_555 84.0 ? 10 S3 ? D SF4 . ? A SF4 202 ? 1_555 FE4 ? D SF4 . ? A SF4 202 ? 1_555 SG ? A CYS 81 ? A CYS 87 ? 1_555 155.9 ? 11 SG ? A CYS 68 ? A CYS 74 ? 1_555 FE1 ? D SF4 . ? A SF4 202 ? 1_555 S2 ? D SF4 . ? A SF4 202 ? 1_555 119.3 ? 12 SG ? A CYS 68 ? A CYS 74 ? 1_555 FE1 ? D SF4 . ? A SF4 202 ? 1_555 S3 ? D SF4 . ? A SF4 202 ? 1_555 115.0 ? 13 S2 ? D SF4 . ? A SF4 202 ? 1_555 FE1 ? D SF4 . ? A SF4 202 ? 1_555 S3 ? D SF4 . ? A SF4 202 ? 1_555 99.8 ? 14 SG ? A CYS 68 ? A CYS 74 ? 1_555 FE1 ? D SF4 . ? A SF4 202 ? 1_555 S4 ? D SF4 . ? A SF4 202 ? 1_555 112.3 ? 15 S2 ? D SF4 . ? A SF4 202 ? 1_555 FE1 ? D SF4 . ? A SF4 202 ? 1_555 S4 ? D SF4 . ? A SF4 202 ? 1_555 102.6 ? 16 S3 ? D SF4 . ? A SF4 202 ? 1_555 FE1 ? D SF4 . ? A SF4 202 ? 1_555 S4 ? D SF4 . ? A SF4 202 ? 1_555 106.1 ? 17 SG ? A CYS 70 ? A CYS 76 ? 1_555 FE2 ? D SF4 . ? A SF4 202 ? 1_555 S1 ? D SF4 . ? A SF4 202 ? 1_555 110.9 ? 18 SG ? A CYS 70 ? A CYS 76 ? 1_555 FE2 ? D SF4 . ? A SF4 202 ? 1_555 S3 ? D SF4 . ? A SF4 202 ? 1_555 119.4 ? 19 S1 ? D SF4 . ? A SF4 202 ? 1_555 FE2 ? D SF4 . ? A SF4 202 ? 1_555 S3 ? D SF4 . ? A SF4 202 ? 1_555 103.2 ? 20 SG ? A CYS 70 ? A CYS 76 ? 1_555 FE2 ? D SF4 . ? A SF4 202 ? 1_555 S4 ? D SF4 . ? A SF4 202 ? 1_555 111.0 ? 21 S1 ? D SF4 . ? A SF4 202 ? 1_555 FE2 ? D SF4 . ? A SF4 202 ? 1_555 S4 ? D SF4 . ? A SF4 202 ? 1_555 102.9 ? 22 S3 ? D SF4 . ? A SF4 202 ? 1_555 FE2 ? D SF4 . ? A SF4 202 ? 1_555 S4 ? D SF4 . ? A SF4 202 ? 1_555 108.0 ? 23 SG ? A CYS 79 ? A CYS 85 ? 1_555 FE3 ? D SF4 . ? A SF4 202 ? 1_555 S1 ? D SF4 . ? A SF4 202 ? 1_555 106.5 ? 24 SG ? A CYS 79 ? A CYS 85 ? 1_555 FE3 ? D SF4 . ? A SF4 202 ? 1_555 S2 ? D SF4 . ? A SF4 202 ? 1_555 112.4 ? 25 S1 ? D SF4 . ? A SF4 202 ? 1_555 FE3 ? D SF4 . ? A SF4 202 ? 1_555 S2 ? D SF4 . ? A SF4 202 ? 1_555 104.8 ? 26 SG ? A CYS 79 ? A CYS 85 ? 1_555 FE3 ? D SF4 . ? A SF4 202 ? 1_555 S4 ? D SF4 . ? A SF4 202 ? 1_555 118.1 ? 27 S1 ? D SF4 . ? A SF4 202 ? 1_555 FE3 ? D SF4 . ? A SF4 202 ? 1_555 S4 ? D SF4 . ? A SF4 202 ? 1_555 106.6 ? 28 S2 ? D SF4 . ? A SF4 202 ? 1_555 FE3 ? D SF4 . ? A SF4 202 ? 1_555 S4 ? D SF4 . ? A SF4 202 ? 1_555 107.4 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2007-07-10 2 'Structure model' 1 1 2008-05-01 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2017-10-18 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Refinement description' # _pdbx_audit_revision_category.ordinal 1 _pdbx_audit_revision_category.revision_ordinal 4 _pdbx_audit_revision_category.data_content_type 'Structure model' _pdbx_audit_revision_category.category software # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_software.classification' 2 4 'Structure model' '_software.contact_author' 3 4 'Structure model' '_software.contact_author_email' 4 4 'Structure model' '_software.date' 5 4 'Structure model' '_software.language' 6 4 'Structure model' '_software.location' 7 4 'Structure model' '_software.name' 8 4 'Structure model' '_software.type' 9 4 'Structure model' '_software.version' # loop_ _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id _software.pdbx_ordinal DENZO . ? package 'Zbyszek Otwinowski' zbyszek@mix.swmed.edu 'data reduction' http://www.lnls.br/infra/linhasluz/denzo-hkl.htm ? ? 1 SCALEPACK . ? package 'Zbyszek Otwinowski' zbyszek@mix.swmed.edu 'data scaling' http://www.lnls.br/infra/linhasluz/denzo-hkl.htm ? ? 2 AMoRE . ? program 'Jorge Navaza' ccp4@dl.ac.uk phasing http://www.ccp4.ac.uk/main.html Fortran_77 ? 3 CNS . ? package 'Axel T. Brunger' axel.brunger@yale.edu refinement http://cns.csb.yale.edu/v1.1/ Fortran_77 ? 4 PDB_EXTRACT 2.000 'April. 3, 2006' package PDB sw-help@rcsb.rutgers.edu 'data extraction' http://pdb.rutgers.edu/software/ C++ ? 5 ADSC Quantum ? ? ? ? 'data collection' ? ? ? 6 HKL-2000 . ? ? ? ? 'data reduction' ? ? ? 7 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASP A 62 ? ? -152.82 86.18 2 1 THR A 70 ? ? 79.36 -4.08 3 1 HIS B 21 ? ? -148.47 31.15 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 3 'SULFATE ION' SO4 4 'IRON/SULFUR CLUSTER' SF4 5 N-ETHYLMALEIMIDE NEQ 6 water HOH #