data_2QMO # _entry.id 2QMO # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.357 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2QMO pdb_00002qmo 10.2210/pdb2qmo/pdb RCSB RCSB043790 ? ? WWPDB D_1000043790 ? ? # _pdbx_database_related.db_name TargetDB _pdbx_database_related.db_id APC5858 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 2QMO _pdbx_database_status.recvd_initial_deposition_date 2007-07-16 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Chruszcz, M.' 1 ? 'Xu, X.' 2 ? 'Cuff, M.' 3 ? 'Cymborowski, M.' 4 ? 'Zheng, H.' 5 ? 'Savchenko, A.' 6 ? 'Edwards, A.' 7 ? 'Joachimiak, A.' 8 ? 'Minor, W.' 9 0000-0001-7075-7090 'Midwest Center for Structural Genomics (MCSG)' 10 ? # _citation.id primary _citation.title 'Structural characterization of Helicobacter pylori dethiobiotin synthetase reveals differences between family members.' _citation.journal_abbrev 'Febs J.' _citation.journal_volume 279 _citation.page_first 1093 _citation.page_last 1105 _citation.year 2012 _citation.journal_id_ASTM ? _citation.country UK _citation.journal_id_ISSN 1742-464X _citation.journal_id_CSD ? _citation.book_publisher ? _citation.pdbx_database_id_PubMed 22284390 _citation.pdbx_database_id_DOI 10.1111/j.1742-4658.2012.08506.x # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Porebski, P.J.' 1 ? primary 'Klimecka, M.' 2 ? primary 'Chruszcz, M.' 3 ? primary 'Nicholls, R.A.' 4 ? primary 'Murzyn, K.' 5 ? primary 'Cuff, M.E.' 6 ? primary 'Xu, X.' 7 ? primary 'Cymborowski, M.' 8 ? primary 'Murshudov, G.N.' 9 ? primary 'Savchenko, A.' 10 ? primary 'Edwards, A.' 11 ? primary 'Minor, W.' 12 0000-0001-7075-7090 # _cell.entry_id 2QMO _cell.length_a 82.095 _cell.length_b 37.454 _cell.length_c 69.636 _cell.angle_alpha 90.00 _cell.angle_beta 101.48 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 2QMO _symmetry.space_group_name_H-M 'C 1 2 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Dethiobiotin synthetase' 24817.002 1 6.3.3.3 ? ? ? 2 non-polymer syn 'CHLORIDE ION' 35.453 2 ? ? ? ? 3 water nat water 18.015 326 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Dethiobiotin synthase, DTB synthetase, DTBS' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;GH(MSE)LFISATNTNAGKTTCARLLAQYCNACGVKTILLKPIETGVNDAINHSSDAHLFLQDNRLLDRSLTLKDISFYR YHKVSAPLIAQQEEDPNAPIDTDNLTQRLHNFTKTYDLVIVEGAGGLCVPITLEEN(MSE)LDFALKLKAK(MSE)LLIS HDNLGLINDCLLNDFLLKSHQLDYKIAINLKGNNTAFHSISLPYIELFNTRSNNPIVIFQQSLKVL(MSE)SFALK ; _entity_poly.pdbx_seq_one_letter_code_can ;GHMLFISATNTNAGKTTCARLLAQYCNACGVKTILLKPIETGVNDAINHSSDAHLFLQDNRLLDRSLTLKDISFYRYHKV SAPLIAQQEEDPNAPIDTDNLTQRLHNFTKTYDLVIVEGAGGLCVPITLEENMLDFALKLKAKMLLISHDNLGLINDCLL NDFLLKSHQLDYKIAINLKGNNTAFHSISLPYIELFNTRSNNPIVIFQQSLKVLMSFALK ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier APC5858 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 HIS n 1 3 MSE n 1 4 LEU n 1 5 PHE n 1 6 ILE n 1 7 SER n 1 8 ALA n 1 9 THR n 1 10 ASN n 1 11 THR n 1 12 ASN n 1 13 ALA n 1 14 GLY n 1 15 LYS n 1 16 THR n 1 17 THR n 1 18 CYS n 1 19 ALA n 1 20 ARG n 1 21 LEU n 1 22 LEU n 1 23 ALA n 1 24 GLN n 1 25 TYR n 1 26 CYS n 1 27 ASN n 1 28 ALA n 1 29 CYS n 1 30 GLY n 1 31 VAL n 1 32 LYS n 1 33 THR n 1 34 ILE n 1 35 LEU n 1 36 LEU n 1 37 LYS n 1 38 PRO n 1 39 ILE n 1 40 GLU n 1 41 THR n 1 42 GLY n 1 43 VAL n 1 44 ASN n 1 45 ASP n 1 46 ALA n 1 47 ILE n 1 48 ASN n 1 49 HIS n 1 50 SER n 1 51 SER n 1 52 ASP n 1 53 ALA n 1 54 HIS n 1 55 LEU n 1 56 PHE n 1 57 LEU n 1 58 GLN n 1 59 ASP n 1 60 ASN n 1 61 ARG n 1 62 LEU n 1 63 LEU n 1 64 ASP n 1 65 ARG n 1 66 SER n 1 67 LEU n 1 68 THR n 1 69 LEU n 1 70 LYS n 1 71 ASP n 1 72 ILE n 1 73 SER n 1 74 PHE n 1 75 TYR n 1 76 ARG n 1 77 TYR n 1 78 HIS n 1 79 LYS n 1 80 VAL n 1 81 SER n 1 82 ALA n 1 83 PRO n 1 84 LEU n 1 85 ILE n 1 86 ALA n 1 87 GLN n 1 88 GLN n 1 89 GLU n 1 90 GLU n 1 91 ASP n 1 92 PRO n 1 93 ASN n 1 94 ALA n 1 95 PRO n 1 96 ILE n 1 97 ASP n 1 98 THR n 1 99 ASP n 1 100 ASN n 1 101 LEU n 1 102 THR n 1 103 GLN n 1 104 ARG n 1 105 LEU n 1 106 HIS n 1 107 ASN n 1 108 PHE n 1 109 THR n 1 110 LYS n 1 111 THR n 1 112 TYR n 1 113 ASP n 1 114 LEU n 1 115 VAL n 1 116 ILE n 1 117 VAL n 1 118 GLU n 1 119 GLY n 1 120 ALA n 1 121 GLY n 1 122 GLY n 1 123 LEU n 1 124 CYS n 1 125 VAL n 1 126 PRO n 1 127 ILE n 1 128 THR n 1 129 LEU n 1 130 GLU n 1 131 GLU n 1 132 ASN n 1 133 MSE n 1 134 LEU n 1 135 ASP n 1 136 PHE n 1 137 ALA n 1 138 LEU n 1 139 LYS n 1 140 LEU n 1 141 LYS n 1 142 ALA n 1 143 LYS n 1 144 MSE n 1 145 LEU n 1 146 LEU n 1 147 ILE n 1 148 SER n 1 149 HIS n 1 150 ASP n 1 151 ASN n 1 152 LEU n 1 153 GLY n 1 154 LEU n 1 155 ILE n 1 156 ASN n 1 157 ASP n 1 158 CYS n 1 159 LEU n 1 160 LEU n 1 161 ASN n 1 162 ASP n 1 163 PHE n 1 164 LEU n 1 165 LEU n 1 166 LYS n 1 167 SER n 1 168 HIS n 1 169 GLN n 1 170 LEU n 1 171 ASP n 1 172 TYR n 1 173 LYS n 1 174 ILE n 1 175 ALA n 1 176 ILE n 1 177 ASN n 1 178 LEU n 1 179 LYS n 1 180 GLY n 1 181 ASN n 1 182 ASN n 1 183 THR n 1 184 ALA n 1 185 PHE n 1 186 HIS n 1 187 SER n 1 188 ILE n 1 189 SER n 1 190 LEU n 1 191 PRO n 1 192 TYR n 1 193 ILE n 1 194 GLU n 1 195 LEU n 1 196 PHE n 1 197 ASN n 1 198 THR n 1 199 ARG n 1 200 SER n 1 201 ASN n 1 202 ASN n 1 203 PRO n 1 204 ILE n 1 205 VAL n 1 206 ILE n 1 207 PHE n 1 208 GLN n 1 209 GLN n 1 210 SER n 1 211 LEU n 1 212 LYS n 1 213 VAL n 1 214 LEU n 1 215 MSE n 1 216 SER n 1 217 PHE n 1 218 ALA n 1 219 LEU n 1 220 LYS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus Helicobacter _entity_src_gen.pdbx_gene_src_gene 'bioD, HP_0029' _entity_src_gen.gene_src_species 'Helicobacter pylori' _entity_src_gen.gene_src_strain 26695 _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Helicobacter pylori' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 85962 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc 700392 _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21-Gold (DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type Plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name p11 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code BIOD_HELPY _struct_ref.pdbx_db_accession O24872 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MLFISATNTNAGKTTCARLLAQYCNACGVKTILLKPIETGVNDAINHSSDAHLFLQDNRLLDRSLTLKDISFYRYHKVSA PLIAQQEEDPNAPIDTDNLTQRLHNFTKTYDLVIVEGAGGLCVPITLEENMLDFALKLKAKMLLISHDNLGLINDCLLND FLLKSHQLDYKIAINLKGNNTAFHSISLPYIELFNTRSNNPIVIFQQSLKVLMSFALK ; _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 2QMO _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 3 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 220 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession O24872 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 218 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 218 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 2QMO GLY A 1 ? UNP O24872 ? ? 'expression tag' -1 1 1 2QMO HIS A 2 ? UNP O24872 ? ? 'expression tag' 0 2 1 2QMO MSE A 3 ? UNP O24872 MET 1 'modified residue' 1 3 1 2QMO MSE A 133 ? UNP O24872 MET 131 'modified residue' 131 4 1 2QMO MSE A 144 ? UNP O24872 MET 142 'modified residue' 142 5 1 2QMO MSE A 215 ? UNP O24872 MET 213 'modified residue' 213 6 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CL non-polymer . 'CHLORIDE ION' ? 'Cl -1' 35.453 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 2QMO _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.11 _exptl_crystal.density_percent_sol 41.81 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION' _exptl_crystal_grow.temp 273 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH ? _exptl_crystal_grow.pdbx_details 'VAPOR DIFFUSION, temperature 273K' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100.0 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 315' _diffrn_detector.pdbx_collection_date 2007-04-15 _diffrn_detector.details MIRROR # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'SI-111 CHANNEL' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.97918 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'APS BEAMLINE 19-ID' _diffrn_source.pdbx_synchrotron_site APS _diffrn_source.pdbx_synchrotron_beamline 19-ID _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.97918 # _reflns.entry_id 2QMO _reflns.observed_criterion_sigma_I -3.000 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 50.000 _reflns.d_resolution_high 1.470 _reflns.number_obs 35286 _reflns.number_all 35286 _reflns.percent_possible_obs 99.0 _reflns.pdbx_Rmerge_I_obs 0.069 _reflns.pdbx_Rsym_value 0.069 _reflns.pdbx_netI_over_sigmaI 48.7540 _reflns.B_iso_Wilson_estimate 19.80 _reflns.pdbx_redundancy 7.700 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 1.47 _reflns_shell.d_res_low 1.52 _reflns_shell.percent_possible_all 91.3 _reflns_shell.Rmerge_I_obs 0.444 _reflns_shell.pdbx_Rsym_value 0.444 _reflns_shell.meanI_over_sigI_obs 3.10 _reflns_shell.pdbx_redundancy 5.20 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 2QMO _refine.ls_number_reflns_obs 35272 _refine.ls_number_reflns_all 35272 _refine.pdbx_ls_sigma_I 0 _refine.pdbx_ls_sigma_F 0.000 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 50.00 _refine.ls_d_res_high 1.47 _refine.ls_percent_reflns_obs 99.030 _refine.ls_R_factor_obs 0.150 _refine.ls_R_factor_all 0.150 _refine.ls_R_factor_R_work 0.148 _refine.ls_R_factor_R_free 0.179 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.000 _refine.ls_number_reflns_R_free 1769 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.975 _refine.correlation_coeff_Fo_to_Fc_free 0.967 _refine.B_iso_mean 16.37 _refine.aniso_B[1][1] -0.71000 _refine.aniso_B[2][2] -0.16000 _refine.aniso_B[3][3] 0.64000 _refine.aniso_B[1][2] 0.00000 _refine.aniso_B[1][3] -0.58000 _refine.aniso_B[2][3] 0.00000 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS. COOT program has also been used in refinement.' _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct SAD _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.065 _refine.pdbx_overall_ESU_R_Free 0.068 _refine.overall_SU_ML 0.043 _refine.overall_SU_B 2.190 _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag 'LIKELY RESIDUAL' _refine.pdbx_diffrn_id 1 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1729 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 2 _refine_hist.number_atoms_solvent 326 _refine_hist.number_atoms_total 2057 _refine_hist.d_res_high 1.47 _refine_hist.d_res_low 50.00 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.018 0.022 ? 1849 'X-RAY DIFFRACTION' ? r_bond_other_d 0.005 0.020 ? 1701 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.715 1.974 ? 2528 'X-RAY DIFFRACTION' ? r_angle_other_deg 0.876 3.000 ? 3980 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 5.866 5.000 ? 241 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 35.920 25.443 ? 79 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 11.294 15.000 ? 332 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 23.228 15.000 ? 6 'X-RAY DIFFRACTION' ? r_chiral_restr 0.118 0.200 ? 303 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.008 0.020 ? 2091 'X-RAY DIFFRACTION' ? r_gen_planes_other 0.003 0.020 ? 347 'X-RAY DIFFRACTION' ? r_nbd_refined 0.231 0.200 ? 383 'X-RAY DIFFRACTION' ? r_nbd_other 0.200 0.200 ? 1693 'X-RAY DIFFRACTION' ? r_nbtor_refined 0.184 0.200 ? 937 'X-RAY DIFFRACTION' ? r_nbtor_other 0.088 0.200 ? 960 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 0.163 0.200 ? 201 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 0.105 0.200 ? 6 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other 0.241 0.200 ? 56 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 0.162 0.200 ? 31 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 1.537 1.500 ? 1400 'X-RAY DIFFRACTION' ? r_mcbond_other 0.356 1.500 ? 466 'X-RAY DIFFRACTION' ? r_mcangle_it 1.655 2.000 ? 1902 'X-RAY DIFFRACTION' ? r_scbond_it 2.896 3.000 ? 742 'X-RAY DIFFRACTION' ? r_scangle_it 4.139 4.500 ? 626 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 1.47 _refine_ls_shell.d_res_low 1.51 _refine_ls_shell.number_reflns_R_work 2298 _refine_ls_shell.R_factor_R_work 0.211 _refine_ls_shell.percent_reflns_obs 91.35 _refine_ls_shell.R_factor_R_free 0.288 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 119 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 2QMO _struct.title 'Crystal structure of dethiobiotin synthetase (bioD) from Helicobacter pylori' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2QMO _struct_keywords.pdbx_keywords LIGASE _struct_keywords.text ;dethiobiotin synthetase, structural genomics, PSI-2, Protein Structure Initiative, Midwest Center for Structural Genomics, MCSG, ATP-binding, Biotin biosynthesis, Ligase, Magnesium, Nucleotide-binding ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 2 ? D N N 3 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 GLY A 14 ? CYS A 29 ? GLY A 12 CYS A 27 1 ? 16 HELX_P HELX_P2 2 SER A 51 ? ARG A 61 ? SER A 49 ARG A 59 1 ? 11 HELX_P HELX_P3 3 THR A 68 ? SER A 73 ? THR A 66 SER A 71 1 ? 6 HELX_P HELX_P4 4 ALA A 82 ? ASP A 91 ? ALA A 80 ASP A 89 1 ? 10 HELX_P HELX_P5 5 ASP A 97 ? PHE A 108 ? ASP A 95 PHE A 106 1 ? 12 HELX_P HELX_P6 6 THR A 109 ? THR A 111 ? THR A 107 THR A 109 5 ? 3 HELX_P HELX_P7 7 ASN A 132 ? LYS A 141 ? ASN A 130 LYS A 139 1 ? 10 HELX_P HELX_P8 8 GLY A 153 ? SER A 167 ? GLY A 151 SER A 165 1 ? 15 HELX_P HELX_P9 9 ALA A 184 ? SER A 189 ? ALA A 182 SER A 187 1 ? 6 HELX_P HELX_P10 10 SER A 189 ? SER A 200 ? SER A 187 SER A 198 1 ? 12 HELX_P HELX_P11 11 SER A 210 ? LYS A 220 ? SER A 208 LYS A 218 1 ? 11 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A HIS 2 C ? ? ? 1_555 A MSE 3 N ? ? A HIS 0 A MSE 1 1_555 ? ? ? ? ? ? ? 1.315 ? ? covale2 covale both ? A MSE 3 C ? ? ? 1_555 A LEU 4 N ? ? A MSE 1 A LEU 2 1_555 ? ? ? ? ? ? ? 1.329 ? ? covale3 covale both ? A ASN 132 C ? ? ? 1_555 A MSE 133 N ? ? A ASN 130 A MSE 131 1_555 ? ? ? ? ? ? ? 1.338 ? ? covale4 covale both ? A MSE 133 C ? ? ? 1_555 A LEU 134 N ? ? A MSE 131 A LEU 132 1_555 ? ? ? ? ? ? ? 1.322 ? ? covale5 covale both ? A LYS 143 C ? ? ? 1_555 A MSE 144 N ? ? A LYS 141 A MSE 142 1_555 ? ? ? ? ? ? ? 1.325 ? ? covale6 covale both ? A MSE 144 C ? ? ? 1_555 A LEU 145 N ? ? A MSE 142 A LEU 143 1_555 ? ? ? ? ? ? ? 1.342 ? ? covale7 covale both ? A LEU 214 C ? ? ? 1_555 A MSE 215 N ? ? A LEU 212 A MSE 213 1_555 ? ? ? ? ? ? ? 1.338 ? ? covale8 covale both ? A MSE 215 C ? ? ? 1_555 A SER 216 N ? ? A MSE 213 A SER 214 1_555 ? ? ? ? ? ? ? 1.353 ? ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id GLY _struct_mon_prot_cis.label_seq_id 1 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id GLY _struct_mon_prot_cis.auth_seq_id -1 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 HIS _struct_mon_prot_cis.pdbx_label_seq_id_2 2 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 HIS _struct_mon_prot_cis.pdbx_auth_seq_id_2 0 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle -3.27 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 6 ? B ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? parallel A 2 3 ? parallel A 3 4 ? parallel A 4 5 ? parallel A 5 6 ? parallel B 1 2 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 THR A 33 ? LEU A 36 ? THR A 31 LEU A 34 A 2 LEU A 114 ? GLU A 118 ? LEU A 112 GLU A 116 A 3 MSE A 3 ? ALA A 8 ? MSE A 1 ALA A 6 A 4 LYS A 143 ? SER A 148 ? LYS A 141 SER A 146 A 5 TYR A 172 ? ILE A 176 ? TYR A 170 ILE A 174 A 6 VAL A 205 ? ILE A 206 ? VAL A 203 ILE A 204 B 1 ILE A 39 ? GLU A 40 ? ILE A 37 GLU A 38 B 2 TYR A 75 ? ARG A 76 ? TYR A 73 ARG A 74 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N LEU A 36 ? N LEU A 34 O GLU A 118 ? O GLU A 116 A 2 3 O VAL A 117 ? O VAL A 115 N LEU A 4 ? N LEU A 2 A 3 4 N PHE A 5 ? N PHE A 3 O LYS A 143 ? O LYS A 141 A 4 5 N LEU A 146 ? N LEU A 144 O LYS A 173 ? O LYS A 171 A 5 6 N ILE A 176 ? N ILE A 174 O VAL A 205 ? O VAL A 203 B 1 2 N GLU A 40 ? N GLU A 38 O TYR A 75 ? O TYR A 73 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A CL 301 ? 4 'BINDING SITE FOR RESIDUE CL A 301' AC2 Software A CL 302 ? 3 'BINDING SITE FOR RESIDUE CL A 302' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 4 GLY A 153 ? GLY A 151 . ? 1_555 ? 2 AC1 4 LEU A 154 ? LEU A 152 . ? 1_555 ? 3 AC1 4 ILE A 155 ? ILE A 153 . ? 1_555 ? 4 AC1 4 SER A 189 ? SER A 187 . ? 1_555 ? 5 AC2 3 LYS A 15 ? LYS A 13 . ? 1_555 ? 6 AC2 3 THR A 16 ? THR A 14 . ? 1_555 ? 7 AC2 3 HOH D . ? HOH A 517 . ? 1_555 ? # _database_PDB_matrix.entry_id 2QMO _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 2QMO _atom_sites.fract_transf_matrix[1][1] 0.012180 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.002470 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.026700 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.014650 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C CL N O S SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 -1 -1 GLY GLY A . n A 1 2 HIS 2 0 0 HIS HIS A . n A 1 3 MSE 3 1 1 MSE MSE A . n A 1 4 LEU 4 2 2 LEU LEU A . n A 1 5 PHE 5 3 3 PHE PHE A . n A 1 6 ILE 6 4 4 ILE ILE A . n A 1 7 SER 7 5 5 SER SER A . n A 1 8 ALA 8 6 6 ALA ALA A . n A 1 9 THR 9 7 7 THR THR A . n A 1 10 ASN 10 8 8 ASN ASN A . n A 1 11 THR 11 9 9 THR THR A . n A 1 12 ASN 12 10 10 ASN ASN A . n A 1 13 ALA 13 11 11 ALA ALA A . n A 1 14 GLY 14 12 12 GLY GLY A . n A 1 15 LYS 15 13 13 LYS LYS A . n A 1 16 THR 16 14 14 THR THR A . n A 1 17 THR 17 15 15 THR THR A . n A 1 18 CYS 18 16 16 CYS CYS A . n A 1 19 ALA 19 17 17 ALA ALA A . n A 1 20 ARG 20 18 18 ARG ARG A . n A 1 21 LEU 21 19 19 LEU LEU A . n A 1 22 LEU 22 20 20 LEU LEU A . n A 1 23 ALA 23 21 21 ALA ALA A . n A 1 24 GLN 24 22 22 GLN GLN A . n A 1 25 TYR 25 23 23 TYR TYR A . n A 1 26 CYS 26 24 24 CYS CYS A . n A 1 27 ASN 27 25 25 ASN ASN A . n A 1 28 ALA 28 26 26 ALA ALA A . n A 1 29 CYS 29 27 27 CYS CYS A . n A 1 30 GLY 30 28 28 GLY GLY A . n A 1 31 VAL 31 29 29 VAL VAL A . n A 1 32 LYS 32 30 30 LYS LYS A . n A 1 33 THR 33 31 31 THR THR A . n A 1 34 ILE 34 32 32 ILE ILE A . n A 1 35 LEU 35 33 33 LEU LEU A . n A 1 36 LEU 36 34 34 LEU LEU A . n A 1 37 LYS 37 35 35 LYS LYS A . n A 1 38 PRO 38 36 36 PRO PRO A . n A 1 39 ILE 39 37 37 ILE ILE A . n A 1 40 GLU 40 38 38 GLU GLU A . n A 1 41 THR 41 39 39 THR THR A . n A 1 42 GLY 42 40 40 GLY GLY A . n A 1 43 VAL 43 41 41 VAL VAL A . n A 1 44 ASN 44 42 42 ASN ASN A . n A 1 45 ASP 45 43 43 ASP ASP A . n A 1 46 ALA 46 44 44 ALA ALA A . n A 1 47 ILE 47 45 45 ILE ILE A . n A 1 48 ASN 48 46 46 ASN ASN A . n A 1 49 HIS 49 47 47 HIS HIS A . n A 1 50 SER 50 48 48 SER SER A . n A 1 51 SER 51 49 49 SER SER A . n A 1 52 ASP 52 50 50 ASP ASP A . n A 1 53 ALA 53 51 51 ALA ALA A . n A 1 54 HIS 54 52 52 HIS HIS A . n A 1 55 LEU 55 53 53 LEU LEU A . n A 1 56 PHE 56 54 54 PHE PHE A . n A 1 57 LEU 57 55 55 LEU LEU A . n A 1 58 GLN 58 56 56 GLN GLN A . n A 1 59 ASP 59 57 57 ASP ASP A . n A 1 60 ASN 60 58 58 ASN ASN A . n A 1 61 ARG 61 59 59 ARG ARG A . n A 1 62 LEU 62 60 60 LEU LEU A . n A 1 63 LEU 63 61 61 LEU LEU A . n A 1 64 ASP 64 62 62 ASP ASP A . n A 1 65 ARG 65 63 63 ARG ARG A . n A 1 66 SER 66 64 64 SER SER A . n A 1 67 LEU 67 65 65 LEU LEU A . n A 1 68 THR 68 66 66 THR THR A . n A 1 69 LEU 69 67 67 LEU LEU A . n A 1 70 LYS 70 68 68 LYS LYS A . n A 1 71 ASP 71 69 69 ASP ASP A . n A 1 72 ILE 72 70 70 ILE ILE A . n A 1 73 SER 73 71 71 SER SER A . n A 1 74 PHE 74 72 72 PHE PHE A . n A 1 75 TYR 75 73 73 TYR TYR A . n A 1 76 ARG 76 74 74 ARG ARG A . n A 1 77 TYR 77 75 75 TYR TYR A . n A 1 78 HIS 78 76 76 HIS HIS A . n A 1 79 LYS 79 77 77 LYS LYS A . n A 1 80 VAL 80 78 78 VAL VAL A . n A 1 81 SER 81 79 79 SER SER A . n A 1 82 ALA 82 80 80 ALA ALA A . n A 1 83 PRO 83 81 81 PRO PRO A . n A 1 84 LEU 84 82 82 LEU LEU A . n A 1 85 ILE 85 83 83 ILE ILE A . n A 1 86 ALA 86 84 84 ALA ALA A . n A 1 87 GLN 87 85 85 GLN GLN A . n A 1 88 GLN 88 86 86 GLN GLN A . n A 1 89 GLU 89 87 87 GLU GLU A . n A 1 90 GLU 90 88 88 GLU GLU A . n A 1 91 ASP 91 89 89 ASP ASP A . n A 1 92 PRO 92 90 90 PRO PRO A . n A 1 93 ASN 93 91 91 ASN ASN A . n A 1 94 ALA 94 92 92 ALA ALA A . n A 1 95 PRO 95 93 93 PRO PRO A . n A 1 96 ILE 96 94 94 ILE ILE A . n A 1 97 ASP 97 95 95 ASP ASP A . n A 1 98 THR 98 96 96 THR THR A . n A 1 99 ASP 99 97 97 ASP ASP A . n A 1 100 ASN 100 98 98 ASN ASN A . n A 1 101 LEU 101 99 99 LEU LEU A . n A 1 102 THR 102 100 100 THR THR A . n A 1 103 GLN 103 101 101 GLN GLN A . n A 1 104 ARG 104 102 102 ARG ARG A . n A 1 105 LEU 105 103 103 LEU LEU A . n A 1 106 HIS 106 104 104 HIS HIS A . n A 1 107 ASN 107 105 105 ASN ASN A . n A 1 108 PHE 108 106 106 PHE PHE A . n A 1 109 THR 109 107 107 THR THR A . n A 1 110 LYS 110 108 108 LYS LYS A . n A 1 111 THR 111 109 109 THR THR A . n A 1 112 TYR 112 110 110 TYR TYR A . n A 1 113 ASP 113 111 111 ASP ASP A . n A 1 114 LEU 114 112 112 LEU LEU A . n A 1 115 VAL 115 113 113 VAL VAL A . n A 1 116 ILE 116 114 114 ILE ILE A . n A 1 117 VAL 117 115 115 VAL VAL A . n A 1 118 GLU 118 116 116 GLU GLU A . n A 1 119 GLY 119 117 117 GLY GLY A . n A 1 120 ALA 120 118 118 ALA ALA A . n A 1 121 GLY 121 119 119 GLY GLY A . n A 1 122 GLY 122 120 120 GLY GLY A . n A 1 123 LEU 123 121 121 LEU LEU A . n A 1 124 CYS 124 122 122 CYS CYS A . n A 1 125 VAL 125 123 123 VAL VAL A . n A 1 126 PRO 126 124 124 PRO PRO A . n A 1 127 ILE 127 125 125 ILE ILE A . n A 1 128 THR 128 126 126 THR THR A . n A 1 129 LEU 129 127 127 LEU LEU A . n A 1 130 GLU 130 128 128 GLU GLU A . n A 1 131 GLU 131 129 129 GLU GLU A . n A 1 132 ASN 132 130 130 ASN ASN A . n A 1 133 MSE 133 131 131 MSE MSE A . n A 1 134 LEU 134 132 132 LEU LEU A . n A 1 135 ASP 135 133 133 ASP ASP A . n A 1 136 PHE 136 134 134 PHE PHE A . n A 1 137 ALA 137 135 135 ALA ALA A . n A 1 138 LEU 138 136 136 LEU LEU A . n A 1 139 LYS 139 137 137 LYS LYS A . n A 1 140 LEU 140 138 138 LEU LEU A . n A 1 141 LYS 141 139 139 LYS LYS A . n A 1 142 ALA 142 140 140 ALA ALA A . n A 1 143 LYS 143 141 141 LYS LYS A . n A 1 144 MSE 144 142 142 MSE MSE A . n A 1 145 LEU 145 143 143 LEU LEU A . n A 1 146 LEU 146 144 144 LEU LEU A . n A 1 147 ILE 147 145 145 ILE ILE A . n A 1 148 SER 148 146 146 SER SER A . n A 1 149 HIS 149 147 147 HIS HIS A . n A 1 150 ASP 150 148 148 ASP ASP A . n A 1 151 ASN 151 149 149 ASN ASN A . n A 1 152 LEU 152 150 150 LEU LEU A . n A 1 153 GLY 153 151 151 GLY GLY A . n A 1 154 LEU 154 152 152 LEU LEU A . n A 1 155 ILE 155 153 153 ILE ILE A . n A 1 156 ASN 156 154 154 ASN ASN A . n A 1 157 ASP 157 155 155 ASP ASP A . n A 1 158 CYS 158 156 156 CYS CYS A . n A 1 159 LEU 159 157 157 LEU LEU A . n A 1 160 LEU 160 158 158 LEU LEU A . n A 1 161 ASN 161 159 159 ASN ASN A . n A 1 162 ASP 162 160 160 ASP ASP A . n A 1 163 PHE 163 161 161 PHE PHE A . n A 1 164 LEU 164 162 162 LEU LEU A . n A 1 165 LEU 165 163 163 LEU LEU A . n A 1 166 LYS 166 164 164 LYS LYS A . n A 1 167 SER 167 165 165 SER SER A . n A 1 168 HIS 168 166 166 HIS HIS A . n A 1 169 GLN 169 167 167 GLN GLN A . n A 1 170 LEU 170 168 168 LEU LEU A . n A 1 171 ASP 171 169 169 ASP ASP A . n A 1 172 TYR 172 170 170 TYR TYR A . n A 1 173 LYS 173 171 171 LYS LYS A . n A 1 174 ILE 174 172 172 ILE ILE A . n A 1 175 ALA 175 173 173 ALA ALA A . n A 1 176 ILE 176 174 174 ILE ILE A . n A 1 177 ASN 177 175 175 ASN ASN A . n A 1 178 LEU 178 176 176 LEU LEU A . n A 1 179 LYS 179 177 177 LYS LYS A . n A 1 180 GLY 180 178 178 GLY GLY A . n A 1 181 ASN 181 179 179 ASN ASN A . n A 1 182 ASN 182 180 180 ASN ASN A . n A 1 183 THR 183 181 181 THR THR A . n A 1 184 ALA 184 182 182 ALA ALA A . n A 1 185 PHE 185 183 183 PHE PHE A . n A 1 186 HIS 186 184 184 HIS HIS A . n A 1 187 SER 187 185 185 SER SER A . n A 1 188 ILE 188 186 186 ILE ILE A . n A 1 189 SER 189 187 187 SER SER A . n A 1 190 LEU 190 188 188 LEU LEU A . n A 1 191 PRO 191 189 189 PRO PRO A . n A 1 192 TYR 192 190 190 TYR TYR A . n A 1 193 ILE 193 191 191 ILE ILE A . n A 1 194 GLU 194 192 192 GLU GLU A . n A 1 195 LEU 195 193 193 LEU LEU A . n A 1 196 PHE 196 194 194 PHE PHE A . n A 1 197 ASN 197 195 195 ASN ASN A . n A 1 198 THR 198 196 196 THR THR A . n A 1 199 ARG 199 197 197 ARG ARG A . n A 1 200 SER 200 198 198 SER SER A . n A 1 201 ASN 201 199 199 ASN ASN A . n A 1 202 ASN 202 200 200 ASN ASN A . n A 1 203 PRO 203 201 201 PRO PRO A . n A 1 204 ILE 204 202 202 ILE ILE A . n A 1 205 VAL 205 203 203 VAL VAL A . n A 1 206 ILE 206 204 204 ILE ILE A . n A 1 207 PHE 207 205 205 PHE PHE A . n A 1 208 GLN 208 206 206 GLN GLN A . n A 1 209 GLN 209 207 207 GLN GLN A . n A 1 210 SER 210 208 208 SER SER A . n A 1 211 LEU 211 209 209 LEU LEU A . n A 1 212 LYS 212 210 210 LYS LYS A . n A 1 213 VAL 213 211 211 VAL VAL A . n A 1 214 LEU 214 212 212 LEU LEU A . n A 1 215 MSE 215 213 213 MSE MSE A . n A 1 216 SER 216 214 214 SER SER A . n A 1 217 PHE 217 215 215 PHE PHE A . n A 1 218 ALA 218 216 216 ALA ALA A . n A 1 219 LEU 219 217 217 LEU LEU A . n A 1 220 LYS 220 218 218 LYS LYS A . n # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name 'PSI, Protein Structure Initiative' _pdbx_SG_project.full_name_of_center 'Midwest Center for Structural Genomics' _pdbx_SG_project.initial_of_center MCSG # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CL 1 301 1 CL CL A . C 2 CL 1 302 1 CL CL A . D 3 HOH 1 303 2 HOH HOH A . D 3 HOH 2 304 2 HOH HOH A . D 3 HOH 3 305 3 HOH HOH A . D 3 HOH 4 306 3 HOH HOH A . D 3 HOH 5 307 4 HOH HOH A . D 3 HOH 6 308 4 HOH HOH A . D 3 HOH 7 309 5 HOH HOH A . D 3 HOH 8 310 5 HOH HOH A . D 3 HOH 9 311 6 HOH HOH A . D 3 HOH 10 312 6 HOH HOH A . D 3 HOH 11 313 7 HOH HOH A . D 3 HOH 12 314 8 HOH HOH A . D 3 HOH 13 315 8 HOH HOH A . D 3 HOH 14 316 9 HOH HOH A . D 3 HOH 15 317 9 HOH HOH A . D 3 HOH 16 318 10 HOH HOH A . D 3 HOH 17 319 10 HOH HOH A . D 3 HOH 18 320 12 HOH HOH A . D 3 HOH 19 321 12 HOH HOH A . D 3 HOH 20 322 13 HOH HOH A . D 3 HOH 21 323 13 HOH HOH A . D 3 HOH 22 324 15 HOH HOH A . D 3 HOH 23 325 15 HOH HOH A . D 3 HOH 24 326 16 HOH HOH A . D 3 HOH 25 327 16 HOH HOH A . D 3 HOH 26 328 17 HOH HOH A . D 3 HOH 27 329 18 HOH HOH A . D 3 HOH 28 330 18 HOH HOH A . D 3 HOH 29 331 19 HOH HOH A . D 3 HOH 30 332 19 HOH HOH A . D 3 HOH 31 333 20 HOH HOH A . D 3 HOH 32 334 21 HOH HOH A . D 3 HOH 33 335 21 HOH HOH A . D 3 HOH 34 336 23 HOH HOH A . D 3 HOH 35 337 23 HOH HOH A . D 3 HOH 36 338 24 HOH HOH A . D 3 HOH 37 339 24 HOH HOH A . D 3 HOH 38 340 25 HOH HOH A . D 3 HOH 39 341 25 HOH HOH A . D 3 HOH 40 342 26 HOH HOH A . D 3 HOH 41 343 26 HOH HOH A . D 3 HOH 42 344 27 HOH HOH A . D 3 HOH 43 345 27 HOH HOH A . D 3 HOH 44 346 28 HOH HOH A . D 3 HOH 45 347 28 HOH HOH A . D 3 HOH 46 348 30 HOH HOH A . D 3 HOH 47 349 30 HOH HOH A . D 3 HOH 48 350 31 HOH HOH A . D 3 HOH 49 351 31 HOH HOH A . D 3 HOH 50 352 32 HOH HOH A . D 3 HOH 51 353 32 HOH HOH A . D 3 HOH 52 354 33 HOH HOH A . D 3 HOH 53 355 33 HOH HOH A . D 3 HOH 54 356 34 HOH HOH A . D 3 HOH 55 357 34 HOH HOH A . D 3 HOH 56 358 35 HOH HOH A . D 3 HOH 57 359 35 HOH HOH A . D 3 HOH 58 360 36 HOH HOH A . D 3 HOH 59 361 36 HOH HOH A . D 3 HOH 60 362 37 HOH HOH A . D 3 HOH 61 363 37 HOH HOH A . D 3 HOH 62 364 38 HOH HOH A . D 3 HOH 63 365 38 HOH HOH A . D 3 HOH 64 366 39 HOH HOH A . D 3 HOH 65 367 40 HOH HOH A . D 3 HOH 66 368 41 HOH HOH A . D 3 HOH 67 369 41 HOH HOH A . D 3 HOH 68 370 42 HOH HOH A . D 3 HOH 69 371 42 HOH HOH A . D 3 HOH 70 372 43 HOH HOH A . D 3 HOH 71 373 43 HOH HOH A . D 3 HOH 72 374 44 HOH HOH A . D 3 HOH 73 375 44 HOH HOH A . D 3 HOH 74 376 45 HOH HOH A . D 3 HOH 75 377 45 HOH HOH A . D 3 HOH 76 378 47 HOH HOH A . D 3 HOH 77 379 47 HOH HOH A . D 3 HOH 78 380 48 HOH HOH A . D 3 HOH 79 381 48 HOH HOH A . D 3 HOH 80 382 49 HOH HOH A . D 3 HOH 81 383 49 HOH HOH A . D 3 HOH 82 384 50 HOH HOH A . D 3 HOH 83 385 51 HOH HOH A . D 3 HOH 84 386 52 HOH HOH A . D 3 HOH 85 387 53 HOH HOH A . D 3 HOH 86 388 54 HOH HOH A . D 3 HOH 87 389 55 HOH HOH A . D 3 HOH 88 390 56 HOH HOH A . D 3 HOH 89 391 57 HOH HOH A . D 3 HOH 90 392 58 HOH HOH A . D 3 HOH 91 393 60 HOH HOH A . D 3 HOH 92 394 61 HOH HOH A . D 3 HOH 93 395 62 HOH HOH A . D 3 HOH 94 396 63 HOH HOH A . D 3 HOH 95 397 64 HOH HOH A . D 3 HOH 96 398 65 HOH HOH A . D 3 HOH 97 399 66 HOH HOH A . D 3 HOH 98 400 67 HOH HOH A . D 3 HOH 99 401 68 HOH HOH A . D 3 HOH 100 402 69 HOH HOH A . D 3 HOH 101 403 70 HOH HOH A . D 3 HOH 102 404 71 HOH HOH A . D 3 HOH 103 405 72 HOH HOH A . D 3 HOH 104 406 73 HOH HOH A . D 3 HOH 105 407 74 HOH HOH A . D 3 HOH 106 408 75 HOH HOH A . D 3 HOH 107 409 76 HOH HOH A . D 3 HOH 108 410 77 HOH HOH A . D 3 HOH 109 411 78 HOH HOH A . D 3 HOH 110 412 79 HOH HOH A . D 3 HOH 111 413 81 HOH HOH A . D 3 HOH 112 414 83 HOH HOH A . D 3 HOH 113 415 85 HOH HOH A . D 3 HOH 114 416 86 HOH HOH A . D 3 HOH 115 417 87 HOH HOH A . D 3 HOH 116 418 88 HOH HOH A . D 3 HOH 117 419 89 HOH HOH A . D 3 HOH 118 420 90 HOH HOH A . D 3 HOH 119 421 91 HOH HOH A . D 3 HOH 120 422 92 HOH HOH A . D 3 HOH 121 423 93 HOH HOH A . D 3 HOH 122 424 94 HOH HOH A . D 3 HOH 123 425 95 HOH HOH A . D 3 HOH 124 426 96 HOH HOH A . D 3 HOH 125 427 97 HOH HOH A . D 3 HOH 126 428 98 HOH HOH A . D 3 HOH 127 429 99 HOH HOH A . D 3 HOH 128 430 100 HOH HOH A . D 3 HOH 129 431 101 HOH HOH A . D 3 HOH 130 432 102 HOH HOH A . D 3 HOH 131 433 103 HOH HOH A . D 3 HOH 132 434 104 HOH HOH A . D 3 HOH 133 435 105 HOH HOH A . D 3 HOH 134 436 106 HOH HOH A . D 3 HOH 135 437 107 HOH HOH A . D 3 HOH 136 438 108 HOH HOH A . D 3 HOH 137 439 109 HOH HOH A . D 3 HOH 138 440 110 HOH HOH A . D 3 HOH 139 441 111 HOH HOH A . D 3 HOH 140 442 112 HOH HOH A . D 3 HOH 141 443 113 HOH HOH A . D 3 HOH 142 444 114 HOH HOH A . D 3 HOH 143 445 116 HOH HOH A . D 3 HOH 144 446 118 HOH HOH A . D 3 HOH 145 447 119 HOH HOH A . D 3 HOH 146 448 120 HOH HOH A . D 3 HOH 147 449 121 HOH HOH A . D 3 HOH 148 450 122 HOH HOH A . D 3 HOH 149 451 124 HOH HOH A . D 3 HOH 150 452 125 HOH HOH A . D 3 HOH 151 453 126 HOH HOH A . D 3 HOH 152 454 127 HOH HOH A . D 3 HOH 153 455 128 HOH HOH A . D 3 HOH 154 456 129 HOH HOH A . D 3 HOH 155 457 130 HOH HOH A . D 3 HOH 156 458 131 HOH HOH A . D 3 HOH 157 459 132 HOH HOH A . D 3 HOH 158 460 133 HOH HOH A . D 3 HOH 159 461 134 HOH HOH A . D 3 HOH 160 462 135 HOH HOH A . D 3 HOH 161 463 137 HOH HOH A . D 3 HOH 162 464 138 HOH HOH A . D 3 HOH 163 465 139 HOH HOH A . D 3 HOH 164 466 140 HOH HOH A . D 3 HOH 165 467 141 HOH HOH A . D 3 HOH 166 468 142 HOH HOH A . D 3 HOH 167 469 143 HOH HOH A . D 3 HOH 168 470 144 HOH HOH A . D 3 HOH 169 471 145 HOH HOH A . D 3 HOH 170 472 146 HOH HOH A . D 3 HOH 171 473 147 HOH HOH A . D 3 HOH 172 474 148 HOH HOH A . D 3 HOH 173 475 150 HOH HOH A . D 3 HOH 174 476 151 HOH HOH A . D 3 HOH 175 477 152 HOH HOH A . D 3 HOH 176 478 153 HOH HOH A . D 3 HOH 177 479 154 HOH HOH A . D 3 HOH 178 480 155 HOH HOH A . D 3 HOH 179 481 157 HOH HOH A . D 3 HOH 180 482 158 HOH HOH A . D 3 HOH 181 483 159 HOH HOH A . D 3 HOH 182 484 160 HOH HOH A . D 3 HOH 183 485 161 HOH HOH A . D 3 HOH 184 486 163 HOH HOH A . D 3 HOH 185 487 164 HOH HOH A . D 3 HOH 186 488 165 HOH HOH A . D 3 HOH 187 489 166 HOH HOH A . D 3 HOH 188 490 167 HOH HOH A . D 3 HOH 189 491 168 HOH HOH A . D 3 HOH 190 492 169 HOH HOH A . D 3 HOH 191 493 170 HOH HOH A . D 3 HOH 192 494 171 HOH HOH A . D 3 HOH 193 495 172 HOH HOH A . D 3 HOH 194 496 173 HOH HOH A . D 3 HOH 195 497 175 HOH HOH A . D 3 HOH 196 498 178 HOH HOH A . D 3 HOH 197 499 179 HOH HOH A . D 3 HOH 198 500 180 HOH HOH A . D 3 HOH 199 501 182 HOH HOH A . D 3 HOH 200 502 183 HOH HOH A . D 3 HOH 201 503 184 HOH HOH A . D 3 HOH 202 504 187 HOH HOH A . D 3 HOH 203 505 189 HOH HOH A . D 3 HOH 204 506 190 HOH HOH A . D 3 HOH 205 507 191 HOH HOH A . D 3 HOH 206 508 192 HOH HOH A . D 3 HOH 207 509 193 HOH HOH A . D 3 HOH 208 510 194 HOH HOH A . D 3 HOH 209 511 195 HOH HOH A . D 3 HOH 210 512 196 HOH HOH A . D 3 HOH 211 513 198 HOH HOH A . D 3 HOH 212 514 199 HOH HOH A . D 3 HOH 213 515 200 HOH HOH A . D 3 HOH 214 516 201 HOH HOH A . D 3 HOH 215 517 202 HOH HOH A . D 3 HOH 216 518 203 HOH HOH A . D 3 HOH 217 519 204 HOH HOH A . D 3 HOH 218 520 206 HOH HOH A . D 3 HOH 219 521 207 HOH HOH A . D 3 HOH 220 522 208 HOH HOH A . D 3 HOH 221 523 210 HOH HOH A . D 3 HOH 222 524 211 HOH HOH A . D 3 HOH 223 525 212 HOH HOH A . D 3 HOH 224 526 213 HOH HOH A . D 3 HOH 225 527 214 HOH HOH A . D 3 HOH 226 528 215 HOH HOH A . D 3 HOH 227 529 216 HOH HOH A . D 3 HOH 228 530 217 HOH HOH A . D 3 HOH 229 531 218 HOH HOH A . D 3 HOH 230 532 219 HOH HOH A . D 3 HOH 231 533 220 HOH HOH A . D 3 HOH 232 534 221 HOH HOH A . D 3 HOH 233 535 222 HOH HOH A . D 3 HOH 234 536 223 HOH HOH A . D 3 HOH 235 537 224 HOH HOH A . D 3 HOH 236 538 225 HOH HOH A . D 3 HOH 237 539 226 HOH HOH A . D 3 HOH 238 540 227 HOH HOH A . D 3 HOH 239 541 228 HOH HOH A . D 3 HOH 240 542 229 HOH HOH A . D 3 HOH 241 543 230 HOH HOH A . D 3 HOH 242 544 231 HOH HOH A . D 3 HOH 243 545 232 HOH HOH A . D 3 HOH 244 546 233 HOH HOH A . D 3 HOH 245 547 234 HOH HOH A . D 3 HOH 246 548 235 HOH HOH A . D 3 HOH 247 549 236 HOH HOH A . D 3 HOH 248 550 237 HOH HOH A . D 3 HOH 249 551 238 HOH HOH A . D 3 HOH 250 552 239 HOH HOH A . D 3 HOH 251 553 240 HOH HOH A . D 3 HOH 252 554 241 HOH HOH A . D 3 HOH 253 555 242 HOH HOH A . D 3 HOH 254 556 243 HOH HOH A . D 3 HOH 255 557 244 HOH HOH A . D 3 HOH 256 558 245 HOH HOH A . D 3 HOH 257 559 246 HOH HOH A . D 3 HOH 258 560 247 HOH HOH A . D 3 HOH 259 561 248 HOH HOH A . D 3 HOH 260 562 249 HOH HOH A . D 3 HOH 261 563 250 HOH HOH A . D 3 HOH 262 564 251 HOH HOH A . D 3 HOH 263 565 253 HOH HOH A . D 3 HOH 264 566 254 HOH HOH A . D 3 HOH 265 567 256 HOH HOH A . D 3 HOH 266 568 257 HOH HOH A . D 3 HOH 267 569 258 HOH HOH A . D 3 HOH 268 570 259 HOH HOH A . D 3 HOH 269 571 260 HOH HOH A . D 3 HOH 270 572 261 HOH HOH A . D 3 HOH 271 573 262 HOH HOH A . D 3 HOH 272 574 263 HOH HOH A . D 3 HOH 273 575 264 HOH HOH A . D 3 HOH 274 576 265 HOH HOH A . D 3 HOH 275 577 266 HOH HOH A . D 3 HOH 276 578 267 HOH HOH A . D 3 HOH 277 579 268 HOH HOH A . D 3 HOH 278 580 269 HOH HOH A . D 3 HOH 279 581 270 HOH HOH A . D 3 HOH 280 582 271 HOH HOH A . D 3 HOH 281 583 272 HOH HOH A . D 3 HOH 282 584 273 HOH HOH A . D 3 HOH 283 585 274 HOH HOH A . D 3 HOH 284 586 275 HOH HOH A . D 3 HOH 285 587 276 HOH HOH A . D 3 HOH 286 588 277 HOH HOH A . D 3 HOH 287 589 278 HOH HOH A . D 3 HOH 288 590 280 HOH HOH A . D 3 HOH 289 591 281 HOH HOH A . D 3 HOH 290 592 282 HOH HOH A . D 3 HOH 291 593 283 HOH HOH A . D 3 HOH 292 594 284 HOH HOH A . D 3 HOH 293 595 285 HOH HOH A . D 3 HOH 294 596 286 HOH HOH A . D 3 HOH 295 597 287 HOH HOH A . D 3 HOH 296 598 288 HOH HOH A . D 3 HOH 297 599 289 HOH HOH A . D 3 HOH 298 600 290 HOH HOH A . D 3 HOH 299 601 291 HOH HOH A . D 3 HOH 300 602 292 HOH HOH A . D 3 HOH 301 603 293 HOH HOH A . D 3 HOH 302 604 294 HOH HOH A . D 3 HOH 303 605 295 HOH HOH A . D 3 HOH 304 606 296 HOH HOH A . D 3 HOH 305 607 297 HOH HOH A . D 3 HOH 306 608 298 HOH HOH A . D 3 HOH 307 609 299 HOH HOH A . D 3 HOH 308 610 300 HOH HOH A . D 3 HOH 309 611 301 HOH HOH A . D 3 HOH 310 612 302 HOH HOH A . D 3 HOH 311 613 304 HOH HOH A . D 3 HOH 312 614 305 HOH HOH A . D 3 HOH 313 615 306 HOH HOH A . D 3 HOH 314 616 307 HOH HOH A . D 3 HOH 315 617 308 HOH HOH A . D 3 HOH 316 618 309 HOH HOH A . D 3 HOH 317 619 310 HOH HOH A . D 3 HOH 318 620 312 HOH HOH A . D 3 HOH 319 621 313 HOH HOH A . D 3 HOH 320 622 315 HOH HOH A . D 3 HOH 321 623 316 HOH HOH A . D 3 HOH 322 624 1 HOH HOH A . D 3 HOH 323 625 11 HOH HOH A . D 3 HOH 324 626 14 HOH HOH A . D 3 HOH 325 627 22 HOH HOH A . D 3 HOH 326 628 29 HOH HOH A . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 3 A MSE 1 ? MET SELENOMETHIONINE 2 A MSE 133 A MSE 131 ? MET SELENOMETHIONINE 3 A MSE 144 A MSE 142 ? MET SELENOMETHIONINE 4 A MSE 215 A MSE 213 ? MET SELENOMETHIONINE # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # _pdbx_struct_assembly_prop.biol_id 1 _pdbx_struct_assembly_prop.type 'ABSA (A^2)' _pdbx_struct_assembly_prop.value 3540 _pdbx_struct_assembly_prop.details ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 2_656 -x+1,y,-z+1 -1.0000000000 0.0000000000 0.0000000000 68.2356349326 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 68.2428787195 # _pdbx_struct_special_symmetry.id 1 _pdbx_struct_special_symmetry.PDB_model_num 1 _pdbx_struct_special_symmetry.auth_asym_id A _pdbx_struct_special_symmetry.auth_comp_id HOH _pdbx_struct_special_symmetry.auth_seq_id 313 _pdbx_struct_special_symmetry.PDB_ins_code ? _pdbx_struct_special_symmetry.label_asym_id D _pdbx_struct_special_symmetry.label_comp_id HOH _pdbx_struct_special_symmetry.label_seq_id . # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2007-07-31 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2012-03-28 4 'Structure model' 1 3 2013-03-27 5 'Structure model' 1 4 2022-04-13 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' Advisory 2 2 'Structure model' 'Source and taxonomy' 3 2 'Structure model' 'Version format compliance' 4 3 'Structure model' 'Database references' 5 4 'Structure model' 'Database references' 6 5 'Structure model' 'Database references' 7 5 'Structure model' 'Derived calculations' 8 5 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 5 'Structure model' audit_author 2 5 'Structure model' citation_author 3 5 'Structure model' database_2 4 5 'Structure model' pdbx_struct_special_symmetry 5 5 'Structure model' struct_conn 6 5 'Structure model' struct_ref_seq_dif 7 5 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 5 'Structure model' '_audit_author.identifier_ORCID' 2 5 'Structure model' '_citation_author.identifier_ORCID' 3 5 'Structure model' '_database_2.pdbx_DOI' 4 5 'Structure model' '_database_2.pdbx_database_accession' 5 5 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 6 5 'Structure model' '_struct_ref_seq_dif.details' 7 5 'Structure model' '_struct_site.pdbx_auth_asym_id' 8 5 'Structure model' '_struct_site.pdbx_auth_comp_id' 9 5 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.pdbx_refine_id 1 ? refined 26.6160 9.5830 15.1480 -0.0095 -0.0372 -0.0020 0.0035 -0.0148 0.0026 2.1913 0.2299 1.3927 0.0637 0.2132 -0.1989 0.0578 0.0404 -0.1815 -0.0768 0.0010 0.0380 0.1709 -0.0127 -0.0588 'X-RAY DIFFRACTION' 2 ? refined 32.5960 5.4910 7.4730 -0.0031 -0.0446 -0.0257 0.0362 -0.0244 -0.0391 3.1778 0.5989 2.4612 0.3137 1.2460 0.2891 0.1613 0.2623 -0.3739 -0.1068 -0.0484 0.0294 0.2864 0.1082 -0.1129 'X-RAY DIFFRACTION' 3 ? refined 49.0620 12.4710 15.2500 -0.0335 0.0200 -0.0246 0.0477 -0.0037 0.0304 4.9923 4.3767 0.2843 -2.5904 -0.7114 0.7719 0.1872 0.2620 0.0753 -0.2477 -0.2695 -0.2831 0.0542 0.2197 0.0822 'X-RAY DIFFRACTION' 4 ? refined 35.6970 21.5490 7.2280 -0.0273 0.0124 -0.0378 -0.0029 0.0177 0.0439 14.0341 3.1263 5.0128 0.4352 7.4310 -0.0497 0.0319 0.4957 0.1761 -0.0524 -0.0682 -0.1106 0.0412 0.1172 0.0363 'X-RAY DIFFRACTION' 5 ? refined 32.6780 19.5630 15.5570 -0.0329 -0.0334 -0.0141 0.0060 0.0058 0.0170 1.7296 0.8111 0.9701 -0.2496 0.8431 -0.2328 -0.0176 0.1019 0.1084 -0.0185 -0.0040 -0.0213 -0.0471 0.0480 0.0217 'X-RAY DIFFRACTION' 6 ? refined 25.6270 14.4810 30.7540 -0.0209 -0.0284 0.0044 0.0115 0.0017 0.0007 0.9718 0.0383 1.5518 0.1537 0.2767 -0.0997 0.0044 -0.0180 0.0013 0.0505 -0.0060 -0.0468 -0.0793 -0.0404 0.0016 'X-RAY DIFFRACTION' 7 ? refined 17.5090 14.8960 37.6540 -0.0527 -0.0276 -0.0029 0.0040 0.0028 -0.0071 0.4622 2.4960 1.6210 0.3319 -0.0215 0.1369 0.0487 -0.0182 0.0629 0.0850 -0.0671 -0.0736 -0.0811 -0.0908 0.0185 'X-RAY DIFFRACTION' 8 ? refined 15.1030 15.3550 21.2560 -0.0573 -0.0029 -0.0036 0.0005 0.0051 0.0119 1.0240 4.9151 3.0065 -0.1837 0.1237 -3.0266 0.0886 0.1171 0.0474 -0.0684 0.0599 0.1763 0.0283 -0.1245 -0.1485 'X-RAY DIFFRACTION' # loop_ _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.selection_details 1 1 A -1 A 1 A 45 A 47 ? 'X-RAY DIFFRACTION' ? 2 2 A 46 A 48 A 78 A 80 ? 'X-RAY DIFFRACTION' ? 3 3 A 79 A 81 A 94 A 96 ? 'X-RAY DIFFRACTION' ? 4 4 A 95 A 97 A 105 A 107 ? 'X-RAY DIFFRACTION' ? 5 5 A 106 A 108 A 141 A 143 ? 'X-RAY DIFFRACTION' ? 6 6 A 142 A 144 A 181 A 183 ? 'X-RAY DIFFRACTION' ? 7 7 A 182 A 184 A 203 A 205 ? 'X-RAY DIFFRACTION' ? 8 8 A 204 A 206 A 218 A 220 ? 'X-RAY DIFFRACTION' ? # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal HKL-3000 phasing . ? 1 MLPHARE phasing . ? 2 DM 'model building' . ? 3 SHELXD phasing . ? 4 ARP/wARP 'model building' . ? 5 REFMAC refinement 5.2.0005 ? 6 HKL-3000 'data collection' . ? 7 HKL-2000 'data reduction' . ? 8 HKL-2000 'data scaling' . ? 9 DM phasing . ? 10 SHELXE 'model building' . ? 11 RESOLVE phasing . ? 12 O 'model building' . ? 13 Coot 'model building' . ? 14 CCP4 phasing . ? 15 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASP A 62 ? ? -161.69 105.11 2 1 SER A 79 ? A -65.19 -173.72 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'CHLORIDE ION' CL 3 water HOH #