HEADER CELL CYCLE 30-JUL-07 2QRZ TITLE CDC42 BOUND TO GMP-PCP: INDUCED FIT BY EFFECTOR IS REQUIRED COMPND MOL_ID: 1; COMPND 2 MOLECULE: CELL DIVISION CONTROL PROTEIN 42 HOMOLOG COMPND 3 PRECURSOR; COMPND 4 CHAIN: A, B; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: CDC42; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET15B KEYWDS G-DOMAIN FOLD, G PROTEIN, GTPASE, ALTERNATIVE SPLICING, GTP- KEYWDS 2 BINDING, LIPOPROTEIN, MEMBRANE, METHYLATION, NUCLEOTIDE- KEYWDS 3 BINDING, PRENYLATION, CELL CYCLE EXPDTA X-RAY DIFFRACTION AUTHOR M.J.PHILLIPS,G.CALERO,B.CHAN,R.A.CERIONE REVDAT 3 24-FEB-09 2QRZ 1 VERSN REVDAT 2 27-MAY-08 2QRZ 1 JRNL REVDAT 1 18-MAR-08 2QRZ 0 JRNL AUTH M.J.PHILLIPS,G.CALERO,B.CHAN,S.RAMACHANDRAN, JRNL AUTH 2 R.A.CERIONE JRNL TITL EFFECTOR PROTEINS EXERT AN IMPORTANT INFLUENCE ON JRNL TITL 2 THE SIGNALING-ACTIVE STATE OF THE SMALL GTPASE JRNL TITL 3 CDC42. JRNL REF J.BIOL.CHEM. V. 283 14153 2008 JRNL REFN ISSN 0021-9258 JRNL PMID 18348980 JRNL DOI 10.1074/JBC.M706271200 REMARK 1 REMARK 2 REMARK 2 RESOLUTION. 2.40 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.1 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES, PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.40 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 31.27 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : 1438867.625 REMARK 3 DATA CUTOFF LOW (ABS(F)) : 0.0000 REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 99.5 REMARK 3 NUMBER OF REFLECTIONS : 20185 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.234 REMARK 3 FREE R VALUE : 0.263 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1034 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.008 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 6 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.40 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.55 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.00 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 3124 REMARK 3 BIN R VALUE (WORKING SET) : 0.3770 REMARK 3 BIN FREE R VALUE : 0.4380 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 5.40 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 180 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.033 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2931 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 71 REMARK 3 SOLVENT ATOMS : 115 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 72.60 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 2.35000 REMARK 3 B22 (A**2) : 2.35000 REMARK 3 B33 (A**2) : -4.71000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.38 REMARK 3 ESD FROM SIGMAA (A) : 0.33 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.44 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.38 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.010 REMARK 3 BOND ANGLES (DEGREES) : 1.40 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 23.20 REMARK 3 IMPROPER ANGLES (DEGREES) : 3.05 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : RESTRAINED REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : FLAT MODEL REMARK 3 KSOL : 0.35 REMARK 3 BSOL : 69.81 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PROTEIN_REP.PARAM REMARK 3 PARAMETER FILE 2 : GMPPCP.PAR REMARK 3 PARAMETER FILE 3 : ION.PARAM REMARK 3 PARAMETER FILE 4 : WATER_REP.PARAM REMARK 3 PARAMETER FILE 5 : NULL REMARK 3 TOPOLOGY FILE 1 : PROTEIN.TOP REMARK 3 TOPOLOGY FILE 2 : GMPPCP.TOP REMARK 3 TOPOLOGY FILE 3 : ION.TOP REMARK 3 TOPOLOGY FILE 4 : WATER.TOP REMARK 3 TOPOLOGY FILE 5 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: BULK SOLVENT MODEL USED REMARK 4 REMARK 4 2QRZ COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 01-AUG-07. REMARK 100 THE RCSB ID CODE IS RCSB043980. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : CHESS REMARK 200 BEAMLINE : A1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.978 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 210 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 20185 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.400 REMARK 200 RESOLUTION RANGE LOW (A) : 31.270 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 200 DATA REDUNDANCY : 4.100 REMARK 200 R MERGE (I) : 0.06800 REMARK 200 R SYM (I) : 0.06800 REMARK 200 FOR THE DATA SET : 6.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.40 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 58.29 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.95 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 12% PEG 6K, 100 MM NA ACETATE, 50 REMARK 280 MM MES, PH 6.0, 100 MM AMMONIUM SULFATE, VAPOR DIFFUSION, REMARK 280 HANGING DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+3/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+1/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+3/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 51.20000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 49.25000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 49.25000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 25.60000 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 49.25000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 49.25000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 76.80000 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 49.25000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 49.25000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 25.60000 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 49.25000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 49.25000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 76.80000 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 51.20000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3230 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 18960 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -50.2 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 PRO B 180 REMARK 465 GLU B 181 REMARK 465 PRO B 182 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OH TYR A 32 O HOH A 201 2.12 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 3644 O HOH A 3686 8665 0.36 REMARK 500 OH TYR A 64 OH TYR A 64 8665 1.23 REMARK 500 CZ TYR A 64 OH TYR A 64 8665 1.88 REMARK 500 OD1 ASP A 63 O HOH A 3689 8665 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 96 -51.25 -123.99 REMARK 500 LYS A 150 32.69 72.52 REMARK 500 LEU A 177 98.51 -48.51 REMARK 500 PRO A 180 -22.76 -37.79 REMARK 500 GLU A 181 128.84 -24.26 REMARK 500 PRO A 182 -72.98 -15.25 REMARK 500 LYS A 183 94.30 -164.13 REMARK 500 LYS A 184 47.83 -158.19 REMARK 500 ALA B 13 -0.50 73.30 REMARK 500 SER B 30 -60.44 -97.83 REMARK 500 PHE B 37 31.95 -85.71 REMARK 500 TYR B 64 11.00 -59.64 REMARK 500 ASP B 65 -72.46 -56.42 REMARK 500 PRO B 69 -7.68 -57.21 REMARK 500 LYS B 96 -64.55 -136.22 REMARK 500 LYS B 153 179.89 179.98 REMARK 500 LEU B 160 -74.87 -77.80 REMARK 500 GLN B 162 14.86 82.85 REMARK 500 GLU B 178 145.81 175.47 REMARK 500 LYS B 184 34.08 -150.07 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 190 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 THR A 17 OG1 REMARK 620 2 GCP A3639 O2B 98.2 REMARK 620 3 GCP A3639 O1G 176.8 78.9 REMARK 620 4 HOH A3641 O 97.6 80.8 83.3 REMARK 620 5 HOH A3710 O 92.4 161.5 90.8 82.8 REMARK 620 6 HOH A3642 O 86.3 95.8 92.6 175.1 100.1 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B 190 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 THR B 17 OG1 REMARK 620 2 GCP B 191 O1G 114.2 REMARK 620 3 HOH B 194 O 131.8 73.9 REMARK 620 N 1 2 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 190 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG B 190 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 3638 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GCP A 3639 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GCP B 191 DBREF 2QRZ A 1 189 UNP P60953 CDC42_HUMAN 1 189 DBREF 2QRZ B 1 189 UNP P60953 CDC42_HUMAN 1 189 SEQADV 2QRZ LYS A 163 UNP P60953 ARG 163 VARIANT SEQADV 2QRZ PRO A 182 UNP P60953 THR 182 VARIANT SEQADV 2QRZ LYS A 183 UNP P60953 GLN 183 VARIANT SEQADV 2QRZ LYS A 184 UNP P60953 PRO 184 VARIANT SEQADV 2QRZ SER A 185 UNP P60953 LYS 185 VARIANT SEQADV 2QRZ ARG A 186 UNP P60953 ARG 186 VARIANT SEQADV 2QRZ ARG A 187 UNP P60953 LYS 187 VARIANT SEQADV 2QRZ VAL A 189 UNP P60953 CYS 189 VARIANT SEQADV 2QRZ LYS B 163 UNP P60953 ARG 163 VARIANT SEQADV 2QRZ PRO B 182 UNP P60953 THR 182 VARIANT SEQADV 2QRZ LYS B 183 UNP P60953 GLN 183 VARIANT SEQADV 2QRZ LYS B 184 UNP P60953 PRO 184 VARIANT SEQADV 2QRZ SER B 185 UNP P60953 LYS 185 VARIANT SEQADV 2QRZ ARG B 186 UNP P60953 ARG 186 VARIANT SEQADV 2QRZ ARG B 187 UNP P60953 LYS 187 VARIANT SEQADV 2QRZ VAL B 189 UNP P60953 CYS 189 VARIANT SEQRES 1 A 189 MET GLN THR ILE LYS CYS VAL VAL VAL GLY ASP GLY ALA SEQRES 2 A 189 VAL GLY LYS THR CYS LEU LEU ILE SER TYR THR THR ASN SEQRES 3 A 189 LYS PHE PRO SER GLU TYR VAL PRO THR VAL PHE ASP ASN SEQRES 4 A 189 TYR ALA VAL THR VAL MET ILE GLY GLY GLU PRO TYR THR SEQRES 5 A 189 LEU GLY LEU PHE ASP THR ALA GLY GLN GLU ASP TYR ASP SEQRES 6 A 189 ARG LEU ARG PRO LEU SER TYR PRO GLN THR ASP VAL PHE SEQRES 7 A 189 LEU VAL CYS PHE SER VAL VAL SER PRO SER SER PHE GLU SEQRES 8 A 189 ASN VAL LYS GLU LYS TRP VAL PRO GLU ILE THR HIS HIS SEQRES 9 A 189 CYS PRO LYS THR PRO PHE LEU LEU VAL GLY THR GLN ILE SEQRES 10 A 189 ASP LEU ARG ASP ASP PRO SER THR ILE GLU LYS LEU ALA SEQRES 11 A 189 LYS ASN LYS GLN LYS PRO ILE THR PRO GLU THR ALA GLU SEQRES 12 A 189 LYS LEU ALA ARG ASP LEU LYS ALA VAL LYS TYR VAL GLU SEQRES 13 A 189 CYS SER ALA LEU THR GLN LYS GLY LEU LYS ASN VAL PHE SEQRES 14 A 189 ASP GLU ALA ILE LEU ALA ALA LEU GLU PRO PRO GLU PRO SEQRES 15 A 189 LYS LYS SER ARG ARG CYS VAL SEQRES 1 B 189 MET GLN THR ILE LYS CYS VAL VAL VAL GLY ASP GLY ALA SEQRES 2 B 189 VAL GLY LYS THR CYS LEU LEU ILE SER TYR THR THR ASN SEQRES 3 B 189 LYS PHE PRO SER GLU TYR VAL PRO THR VAL PHE ASP ASN SEQRES 4 B 189 TYR ALA VAL THR VAL MET ILE GLY GLY GLU PRO TYR THR SEQRES 5 B 189 LEU GLY LEU PHE ASP THR ALA GLY GLN GLU ASP TYR ASP SEQRES 6 B 189 ARG LEU ARG PRO LEU SER TYR PRO GLN THR ASP VAL PHE SEQRES 7 B 189 LEU VAL CYS PHE SER VAL VAL SER PRO SER SER PHE GLU SEQRES 8 B 189 ASN VAL LYS GLU LYS TRP VAL PRO GLU ILE THR HIS HIS SEQRES 9 B 189 CYS PRO LYS THR PRO PHE LEU LEU VAL GLY THR GLN ILE SEQRES 10 B 189 ASP LEU ARG ASP ASP PRO SER THR ILE GLU LYS LEU ALA SEQRES 11 B 189 LYS ASN LYS GLN LYS PRO ILE THR PRO GLU THR ALA GLU SEQRES 12 B 189 LYS LEU ALA ARG ASP LEU LYS ALA VAL LYS TYR VAL GLU SEQRES 13 B 189 CYS SER ALA LEU THR GLN LYS GLY LEU LYS ASN VAL PHE SEQRES 14 B 189 ASP GLU ALA ILE LEU ALA ALA LEU GLU PRO PRO GLU PRO SEQRES 15 B 189 LYS LYS SER ARG ARG CYS VAL HET MG A 190 1 HET SO4 A3638 5 HET MG B 190 1 HET GCP A3639 32 HET GCP B 191 32 HETNAM MG MAGNESIUM ION HETNAM SO4 SULFATE ION HETNAM GCP PHOSPHOMETHYLPHOSPHONIC ACID GUANYLATE ESTER FORMUL 3 MG 2(MG 2+) FORMUL 4 SO4 O4 S 2- FORMUL 6 GCP 2(C11 H18 N5 O13 P3) FORMUL 8 HOH *115(H2 O) HELIX 1 1 GLY A 15 ASN A 26 1 12 HELIX 2 2 GLN A 61 ASP A 65 5 5 HELIX 3 3 LEU A 67 TYR A 72 5 6 HELIX 4 4 SER A 86 LYS A 96 1 11 HELIX 5 5 LYS A 96 CYS A 105 1 10 HELIX 6 6 GLN A 116 ASP A 121 5 6 HELIX 7 7 ASP A 122 LYS A 131 1 10 HELIX 8 8 THR A 138 LYS A 150 1 13 HELIX 9 9 GLY A 164 LEU A 177 1 14 HELIX 10 10 GLY B 15 ASN B 26 1 12 HELIX 11 11 LEU B 67 TYR B 72 5 6 HELIX 12 12 SER B 86 LYS B 96 1 11 HELIX 13 13 LYS B 96 CYS B 105 1 10 HELIX 14 14 PRO B 123 ASN B 132 1 10 HELIX 15 15 THR B 138 LEU B 149 1 12 HELIX 16 16 GLY B 164 ALA B 175 1 12 SHEET 1 A 6 ASN A 39 ILE A 46 0 SHEET 2 A 6 GLU A 49 PHE A 56 -1 O LEU A 53 N VAL A 42 SHEET 3 A 6 GLN A 2 GLY A 10 1 N CYS A 6 O GLY A 54 SHEET 4 A 6 VAL A 77 SER A 83 1 O CYS A 81 N VAL A 9 SHEET 5 A 6 PHE A 110 THR A 115 1 O VAL A 113 N VAL A 80 SHEET 6 A 6 TYR A 154 GLU A 156 1 O VAL A 155 N LEU A 112 SHEET 1 B 6 TYR B 40 ILE B 46 0 SHEET 2 B 6 GLU B 49 PHE B 56 -1 O TYR B 51 N VAL B 44 SHEET 3 B 6 GLN B 2 GLY B 10 1 N ILE B 4 O GLY B 54 SHEET 4 B 6 VAL B 77 SER B 83 1 O CYS B 81 N VAL B 9 SHEET 5 B 6 PHE B 110 THR B 115 1 O THR B 115 N PHE B 82 SHEET 6 B 6 TYR B 154 GLU B 156 1 O VAL B 155 N LEU B 112 SSBOND 1 CYS A 105 CYS A 188 1555 1555 2.04 SSBOND 2 CYS B 105 CYS B 188 1555 1555 2.03 LINK OG1 THR A 17 MG MG A 190 1555 1555 2.04 LINK OG1 THR B 17 MG MG B 190 1555 1555 2.31 LINK MG MG A 190 O2B GCP A3639 1555 1555 2.16 LINK MG MG A 190 O1G GCP A3639 1555 1555 2.07 LINK MG MG B 190 O1G GCP B 191 1555 1555 2.43 LINK MG MG A 190 O HOH A3641 1555 1555 2.39 LINK MG MG A 190 O HOH A3710 1555 1555 2.19 LINK MG MG A 190 O HOH A3642 1555 1555 2.37 LINK MG MG B 190 O HOH B 194 1555 1555 2.42 SITE 1 AC1 4 THR A 17 HOH A3641 HOH A3642 HOH A3710 SITE 1 AC2 4 THR B 17 HOH B 192 HOH B 194 HOH B 207 SITE 1 AC3 3 GLY A 164 HOH A3672 GLY B 164 SITE 1 AC4 17 ALA A 13 GLY A 15 LYS A 16 THR A 17 SITE 2 AC4 17 CYS A 18 GLY A 60 GLN A 61 GLN A 116 SITE 3 AC4 17 ASP A 118 LEU A 119 SER A 158 ALA A 159 SITE 4 AC4 17 LEU A 160 HOH A3641 HOH A3649 HOH A3667 SITE 5 AC4 17 HOH A3710 SITE 1 AC5 21 ASP B 11 GLY B 12 ALA B 13 GLY B 15 SITE 2 AC5 21 LYS B 16 THR B 17 CYS B 18 PHE B 28 SITE 3 AC5 21 GLY B 60 GLN B 61 GLN B 116 ASP B 118 SITE 4 AC5 21 LEU B 119 ALA B 159 LEU B 160 HOH B 192 SITE 5 AC5 21 HOH B 194 HOH B 204 HOH B 209 HOH B 218 SITE 6 AC5 21 HOH B 226 CRYST1 98.500 98.500 102.400 90.00 90.00 90.00 P 41 21 2 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010152 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010152 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009766 0.00000