data_2R0X # _entry.id 2R0X # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.365 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2R0X pdb_00002r0x 10.2210/pdb2r0x/pdb RCSB RCSB044288 ? ? WWPDB D_1000044288 ? ? # _pdbx_database_related.db_name TargetDB _pdbx_database_related.db_id 375038 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.SG_entry Y _pdbx_database_status.entry_id 2R0X _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2007-08-21 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # _audit_author.name 'Joint Center for Structural Genomics (JCSG)' _audit_author.pdbx_ordinal 1 # _citation.id primary _citation.title 'Crystal structure of putative flavin reductase (YP_719437.1) from Haemophilus somnus 129PT at 1.06 A resolution' _citation.journal_abbrev 'To be published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # _citation_author.citation_id primary _citation_author.name 'Joint Center for Structural Genomics (JCSG)' _citation_author.ordinal 1 _citation_author.identifier_ORCID ? # _cell.entry_id 2R0X _cell.length_a 72.020 _cell.length_b 38.850 _cell.length_c 48.440 _cell.angle_alpha 90.000 _cell.angle_beta 115.630 _cell.angle_gamma 90.000 _cell.pdbx_unique_axis ? _cell.Z_PDB 4 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 2R0X _symmetry.Int_Tables_number 5 _symmetry.space_group_name_H-M 'C 1 2 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Possible flavin reductase' 17460.062 1 ? ? ? ? 2 non-polymer syn 'ACETATE ION' 59.044 5 ? ? ? ? 3 non-polymer syn 'SULFATE ION' 96.063 3 ? ? ? ? 4 non-polymer syn 1,2-ETHANEDIOL 62.068 3 ? ? ? ? 5 water nat water 18.015 135 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;G(MSE)VEVSQFKDA(MSE)AQLASAVHIVTTSGETGQHGFTASAVCSVTDSPPTLLVCINSNARAYEHFVKNRVL (MSE)VNTLTAEQSSLSNIFASPLSQEERFSNASWTTLTTGSP(MSE)LQDALINFDCEITEIKHVGTHDILICKIVDIH QSNAKNALVYRNRVYHSV ; _entity_poly.pdbx_seq_one_letter_code_can ;GMVEVSQFKDAMAQLASAVHIVTTSGETGQHGFTASAVCSVTDSPPTLLVCINSNARAYEHFVKNRVLMVNTLTAEQSSL SNIFASPLSQEERFSNASWTTLTTGSPMLQDALINFDCEITEIKHVGTHDILICKIVDIHQSNAKNALVYRNRVYHSV ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier 375038 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 MSE n 1 3 VAL n 1 4 GLU n 1 5 VAL n 1 6 SER n 1 7 GLN n 1 8 PHE n 1 9 LYS n 1 10 ASP n 1 11 ALA n 1 12 MSE n 1 13 ALA n 1 14 GLN n 1 15 LEU n 1 16 ALA n 1 17 SER n 1 18 ALA n 1 19 VAL n 1 20 HIS n 1 21 ILE n 1 22 VAL n 1 23 THR n 1 24 THR n 1 25 SER n 1 26 GLY n 1 27 GLU n 1 28 THR n 1 29 GLY n 1 30 GLN n 1 31 HIS n 1 32 GLY n 1 33 PHE n 1 34 THR n 1 35 ALA n 1 36 SER n 1 37 ALA n 1 38 VAL n 1 39 CYS n 1 40 SER n 1 41 VAL n 1 42 THR n 1 43 ASP n 1 44 SER n 1 45 PRO n 1 46 PRO n 1 47 THR n 1 48 LEU n 1 49 LEU n 1 50 VAL n 1 51 CYS n 1 52 ILE n 1 53 ASN n 1 54 SER n 1 55 ASN n 1 56 ALA n 1 57 ARG n 1 58 ALA n 1 59 TYR n 1 60 GLU n 1 61 HIS n 1 62 PHE n 1 63 VAL n 1 64 LYS n 1 65 ASN n 1 66 ARG n 1 67 VAL n 1 68 LEU n 1 69 MSE n 1 70 VAL n 1 71 ASN n 1 72 THR n 1 73 LEU n 1 74 THR n 1 75 ALA n 1 76 GLU n 1 77 GLN n 1 78 SER n 1 79 SER n 1 80 LEU n 1 81 SER n 1 82 ASN n 1 83 ILE n 1 84 PHE n 1 85 ALA n 1 86 SER n 1 87 PRO n 1 88 LEU n 1 89 SER n 1 90 GLN n 1 91 GLU n 1 92 GLU n 1 93 ARG n 1 94 PHE n 1 95 SER n 1 96 ASN n 1 97 ALA n 1 98 SER n 1 99 TRP n 1 100 THR n 1 101 THR n 1 102 LEU n 1 103 THR n 1 104 THR n 1 105 GLY n 1 106 SER n 1 107 PRO n 1 108 MSE n 1 109 LEU n 1 110 GLN n 1 111 ASP n 1 112 ALA n 1 113 LEU n 1 114 ILE n 1 115 ASN n 1 116 PHE n 1 117 ASP n 1 118 CYS n 1 119 GLU n 1 120 ILE n 1 121 THR n 1 122 GLU n 1 123 ILE n 1 124 LYS n 1 125 HIS n 1 126 VAL n 1 127 GLY n 1 128 THR n 1 129 HIS n 1 130 ASP n 1 131 ILE n 1 132 LEU n 1 133 ILE n 1 134 CYS n 1 135 LYS n 1 136 ILE n 1 137 VAL n 1 138 ASP n 1 139 ILE n 1 140 HIS n 1 141 GLN n 1 142 SER n 1 143 ASN n 1 144 ALA n 1 145 LYS n 1 146 ASN n 1 147 ALA n 1 148 LEU n 1 149 VAL n 1 150 TYR n 1 151 ARG n 1 152 ASN n 1 153 ARG n 1 154 VAL n 1 155 TYR n 1 156 HIS n 1 157 SER n 1 158 VAL n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus Histophilus _entity_src_gen.pdbx_gene_src_gene 'YP_719437.1, ycdH' _entity_src_gen.gene_src_species 'Histophilus somni' _entity_src_gen.gene_src_strain 129Pt _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Haemophilus somnus 129PT' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 205914 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain HK100 _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type Plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name speedET _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q0I3S1_HAES1 _struct_ref.pdbx_db_accession Q0I3S1 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MAQLASAVHIVTTSGETGQHGFTASAVCSVTDSPPTLLVCINSNARAYEHFVKNRVLMVNTLTAEQSSLSNIFASPLSQE ERFSNASWTTLTTGSPMLQDALINFDCEITEIKHVGTHDILICKIVDIHQSNAKNALVYRNRVYHSV ; _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 2R0X _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 12 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 158 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q0I3S1 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 147 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 11 _struct_ref_seq.pdbx_auth_seq_align_end 157 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 2R0X GLY A 1 ? UNP Q0I3S1 ? ? 'expression tag' 0 1 1 2R0X MSE A 2 ? UNP Q0I3S1 ? ? 'expression tag' 1 2 1 2R0X VAL A 3 ? UNP Q0I3S1 ? ? 'expression tag' 2 3 1 2R0X GLU A 4 ? UNP Q0I3S1 ? ? 'expression tag' 3 4 1 2R0X VAL A 5 ? UNP Q0I3S1 ? ? 'expression tag' 4 5 1 2R0X SER A 6 ? UNP Q0I3S1 ? ? 'expression tag' 5 6 1 2R0X GLN A 7 ? UNP Q0I3S1 ? ? 'expression tag' 6 7 1 2R0X PHE A 8 ? UNP Q0I3S1 ? ? 'expression tag' 7 8 1 2R0X LYS A 9 ? UNP Q0I3S1 ? ? 'expression tag' 8 9 1 2R0X ASP A 10 ? UNP Q0I3S1 ? ? 'expression tag' 9 10 1 2R0X ALA A 11 ? UNP Q0I3S1 ? ? 'expression tag' 10 11 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ACT non-polymer . 'ACETATE ION' ? 'C2 H3 O2 -1' 59.044 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 EDO non-polymer . 1,2-ETHANEDIOL 'ETHYLENE GLYCOL' 'C2 H6 O2' 62.068 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 SO4 non-polymer . 'SULFATE ION' ? 'O4 S -2' 96.063 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.crystals_number 1 _exptl.method 'X-RAY DIFFRACTION' _exptl.entry_id 2R0X # _exptl_crystal.id 1 _exptl_crystal.density_Matthews 1.750 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 29.70 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.pH 4.6 _exptl_crystal_grow.temp 293 _exptl_crystal_grow.pdbx_details 'NANODROP, 2.0M Ammonium sulfate, 0.1M Sodium acetate pH 4.6, VAPOR DIFFUSION, SITTING DROP, temperature 293K' _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'MARMOSAIC 325 mm CCD' _diffrn_detector.details 'Flat mirror (vertical focusing)' _diffrn_detector.pdbx_collection_date 2007-07-01 # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Single crystal Si(111) bent (horizontal focusing)' _diffrn_radiation.pdbx_diffrn_protocol MAD _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_scattering_type x-ray # loop_ _diffrn_radiation_wavelength.id _diffrn_radiation_wavelength.wavelength _diffrn_radiation_wavelength.wt 1 0.91837 1.0 2 0.97925 1.0 3 0.97898 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.pdbx_synchrotron_beamline BL11-1 _diffrn_source.type 'SSRL BEAMLINE BL11-1' _diffrn_source.pdbx_wavelength_list '0.91837, 0.97925, 0.97898' _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_site SSRL # _reflns.entry_id 2R0X _reflns.d_resolution_high 1.06 _reflns.d_resolution_low 23.402 _reflns.number_obs 54635 _reflns.pdbx_Rmerge_I_obs 0.070 _reflns.pdbx_netI_over_sigmaI 6.340 _reflns.percent_possible_obs 98.9 _reflns.B_iso_Wilson_estimate 6.164 _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.number_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_redundancy ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.number_measured_obs _reflns_shell.number_measured_all _reflns_shell.number_unique_obs _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_redundancy _reflns_shell.percent_possible_obs _reflns_shell.number_unique_all _reflns_shell.percent_possible_all _reflns_shell.pdbx_diffrn_id _reflns_shell.pdbx_ordinal 1.06 1.10 13485 ? ? 0.678 1.34 ? ? ? ? 9171 97.80 ? 1 1.10 1.14 12285 ? ? 0.450 2.1 ? ? ? ? 8327 84.50 ? 2 1.14 1.19 13474 ? ? 0.378 2.6 ? ? ? ? 8999 86.90 ? 3 1.19 1.26 16108 ? ? 0.332 2.8 ? ? ? ? 10603 88.30 ? 4 1.26 1.34 15131 ? ? 0.273 3.4 ? ? ? ? 9856 90.80 ? 5 1.34 1.44 14853 ? ? 0.204 4.3 ? ? ? ? 9570 93.00 ? 6 1.44 1.58 15647 ? ? 0.144 5.9 ? ? ? ? 9919 95.00 ? 7 1.58 1.81 17179 ? ? 0.086 8.8 ? ? ? ? 10556 97.10 ? 8 1.81 23.402 17564 ? ? 0.044 14.3 ? ? ? ? 10679 98.30 ? 9 # _refine.entry_id 2R0X _refine.ls_d_res_high 1.060 _refine.ls_d_res_low 23.402 _refine.pdbx_ls_sigma_F 0.00 _refine.ls_percent_reflns_obs 99.620 _refine.ls_number_reflns_obs 54635 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details RANDOM _refine.details ;1. HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS. 2. A MET-INHIBITION PROTOCOL WAS USED FOR SELENOMETHIONINE INCORPORATION DURING PROTEIN EXPRESSION. THE OCCUPANCY OF THE SE ATOMS IN THE MSE RESIDUES WAS REDUCED TO 0.75 TO ACCOUNT FOR THE REDUCED SCATTERING POWER DUE TO PARTIAL S-MET INCORPORATION. 3. UNEXPLAINED ELECTRON DENSITY NEAR RESIDUE 42 WAS NOT MODELED. 4. ACETATE ION AND SULFATE ION FROM CRYSTALLIZATION AND ETHYLENE GLYCOL (EDO) FROM CRYO SOLUTION ARE MODELED. ; _refine.ls_R_factor_all 0.143 _refine.ls_R_factor_R_work 0.141 _refine.ls_R_factor_R_free 0.170 _refine.ls_percent_reflns_R_free 5.100 _refine.ls_number_reflns_R_free 2771 _refine.B_iso_mean 9.358 _refine.aniso_B[1][1] -0.150 _refine.aniso_B[2][2] 0.160 _refine.aniso_B[3][3] 0.090 _refine.aniso_B[1][2] 0.000 _refine.aniso_B[1][3] 0.110 _refine.aniso_B[2][3] 0.000 _refine.correlation_coeff_Fo_to_Fc 0.979 _refine.correlation_coeff_Fo_to_Fc_free 0.972 _refine.pdbx_overall_ESU_R 0.031 _refine.pdbx_overall_ESU_R_Free 0.032 _refine.overall_SU_ML 0.023 _refine.overall_SU_B 1.070 _refine.solvent_model_details MASK _refine.pdbx_solvent_vdw_probe_radii 1.200 _refine.pdbx_solvent_ion_probe_radii 0.800 _refine.pdbx_solvent_shrinkage_radii 0.800 _refine.pdbx_method_to_determine_struct MAD _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD WITH PHASES' _refine.pdbx_ls_sigma_I ? _refine.ls_number_reflns_all ? _refine.ls_R_factor_obs 0.143 _refine.ls_redundancy_reflns_obs ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_starting_model ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.pdbx_isotropic_thermal_model ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1178 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 47 _refine_hist.number_atoms_solvent 135 _refine_hist.number_atoms_total 1360 _refine_hist.d_res_high 1.060 _refine_hist.d_res_low 23.402 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 1436 0.015 0.021 ? 'X-RAY DIFFRACTION' ? r_bond_other_d 885 0.002 0.020 ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1974 1.667 1.961 ? 'X-RAY DIFFRACTION' ? r_angle_other_deg 2192 0.993 3.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 196 7.287 5.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 56 35.212 24.821 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 226 11.103 15.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 6 18.543 15.000 ? 'X-RAY DIFFRACTION' ? r_chiral_restr 232 0.106 0.200 ? 'X-RAY DIFFRACTION' ? r_gen_planes_refined 1682 0.009 0.020 ? 'X-RAY DIFFRACTION' ? r_gen_planes_other 275 0.004 0.020 ? 'X-RAY DIFFRACTION' ? r_nbd_refined 261 0.247 0.200 ? 'X-RAY DIFFRACTION' ? r_nbd_other 945 0.210 0.200 ? 'X-RAY DIFFRACTION' ? r_nbtor_refined 701 0.175 0.200 ? 'X-RAY DIFFRACTION' ? r_nbtor_other 759 0.089 0.200 ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 120 0.158 0.200 ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 24 0.152 0.200 ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other 65 0.275 0.200 ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 27 0.145 0.200 ? 'X-RAY DIFFRACTION' ? r_mcbond_it 952 2.236 2.000 ? 'X-RAY DIFFRACTION' ? r_mcbond_other 358 0.832 2.000 ? 'X-RAY DIFFRACTION' ? r_mcangle_it 1521 3.080 3.000 ? 'X-RAY DIFFRACTION' ? r_scbond_it 533 2.632 2.000 ? 'X-RAY DIFFRACTION' ? r_scangle_it 453 3.523 3.000 ? 'X-RAY DIFFRACTION' ? r_rigid_bond_restr 2497 1.440 3.000 ? 'X-RAY DIFFRACTION' ? r_sphericity_free 136 13.401 5.000 ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded 2296 5.840 5.000 ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.d_res_high 1.060 _refine_ls_shell.d_res_low 1.088 _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.percent_reflns_obs 99.630 _refine_ls_shell.number_reflns_R_work 3848 _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_R_work 0.286 _refine_ls_shell.R_factor_R_free 0.293 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 196 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.number_reflns_all ? _refine_ls_shell.number_reflns_obs 4044 _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 2R0X _struct.title 'Crystal structure of a putative flavin reductase (ycdh, hs_1225) from haemophilus somnus 129pt at 1.06 A resolution' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.text ;Split barrel-like, structural genomics, Joint Center for Structural Genomics, JCSG, Protein Structure Initiative, PSI-2, oxidoreductase ; _struct_keywords.pdbx_keywords OXIDOREDUCTASE _struct_keywords.entry_id 2R0X # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 2 ? D N N 2 ? E N N 2 ? F N N 2 ? G N N 3 ? H N N 3 ? I N N 3 ? J N N 4 ? K N N 4 ? L N N 4 ? M N N 5 ? # _struct_biol.id 1 _struct_biol.details ;SIZE EXCLUSION CHROMATOGRAPHY SUPPORTS THE ASSIGNMENT OF A DIMER AS A SIGNIFICANT OLIGOMERIZATION STATE. ; # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 GLU A 4 ? GLN A 14 ? GLU A 3 GLN A 13 1 ? 11 HELX_P HELX_P2 2 ALA A 58 ? ARG A 66 ? ALA A 57 ARG A 65 1 ? 9 HELX_P HELX_P3 3 GLN A 77 ? ALA A 85 ? GLN A 76 ALA A 84 1 ? 9 HELX_P HELX_P4 4 SER A 89 ? SER A 95 ? SER A 88 SER A 94 1 ? 7 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 39 SG B ? ? 1_555 A CYS 39 SG B ? A CYS 38 A CYS 38 2_556 ? ? ? ? ? ? ? 2.213 ? ? covale1 covale both ? A ALA 11 C ? ? ? 1_555 A MSE 12 N A ? A ALA 10 A MSE 11 1_555 ? ? ? ? ? ? ? 1.333 ? ? covale2 covale both ? A ALA 11 C ? ? ? 1_555 A MSE 12 N B ? A ALA 10 A MSE 11 1_555 ? ? ? ? ? ? ? 1.324 ? ? covale3 covale both ? A MSE 12 C A ? ? 1_555 A ALA 13 N ? ? A MSE 11 A ALA 12 1_555 ? ? ? ? ? ? ? 1.325 ? ? covale4 covale both ? A MSE 12 C B ? ? 1_555 A ALA 13 N ? ? A MSE 11 A ALA 12 1_555 ? ? ? ? ? ? ? 1.330 ? ? covale5 covale both ? A LEU 68 C ? ? ? 1_555 A MSE 69 N ? ? A LEU 67 A MSE 68 1_555 ? ? ? ? ? ? ? 1.331 ? ? covale6 covale both ? A MSE 69 C ? ? ? 1_555 A VAL 70 N ? ? A MSE 68 A VAL 69 1_555 ? ? ? ? ? ? ? 1.330 ? ? covale7 covale both ? A PRO 107 C ? ? ? 1_555 A MSE 108 N ? ? A PRO 106 A MSE 107 1_555 ? ? ? ? ? ? ? 1.334 ? ? covale8 covale both ? A MSE 108 C ? ? ? 1_555 A LEU 109 N ? ? A MSE 107 A LEU 108 1_555 ? ? ? ? ? ? ? 1.328 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? covale ? ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 SER 44 A . ? SER 43 A PRO 45 A ? PRO 44 A 1 -10.33 2 SER 44 A . ? SER 43 A PRO 45 A ? PRO 44 A 1 1.51 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 3 ? B ? 7 ? C ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel B 4 5 ? anti-parallel B 5 6 ? anti-parallel B 6 7 ? anti-parallel C 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 SER A 17 ? ALA A 18 ? SER A 16 ALA A 17 A 2 ALA A 147 ? ARG A 151 ? ALA A 146 ARG A 150 A 3 VAL A 154 ? VAL A 158 ? VAL A 153 VAL A 157 B 1 GLN A 30 ? ALA A 35 ? GLN A 29 ALA A 34 B 2 HIS A 20 ? SER A 25 ? HIS A 19 SER A 24 B 3 VAL A 67 ? THR A 72 ? VAL A 66 THR A 71 B 4 ILE A 114 ? VAL A 126 ? ILE A 113 VAL A 125 B 5 HIS A 129 ? GLN A 141 ? HIS A 128 GLN A 140 B 6 THR A 47 ? ASN A 53 ? THR A 46 ASN A 52 B 7 VAL A 38 ? THR A 42 ? VAL A 37 THR A 41 C 1 TRP A 99 ? THR A 100 ? TRP A 98 THR A 99 C 2 MSE A 108 ? LEU A 109 ? MSE A 107 LEU A 108 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N SER A 17 ? N SER A 16 O TYR A 150 ? O TYR A 149 A 2 3 N ALA A 147 ? N ALA A 146 O VAL A 158 ? O VAL A 157 B 1 2 O PHE A 33 ? O PHE A 32 N VAL A 22 ? N VAL A 21 B 2 3 N ILE A 21 ? N ILE A 20 O ASN A 71 ? O ASN A 70 B 3 4 N LEU A 68 ? N LEU A 67 O CYS A 118 ? O CYS A 117 B 4 5 N VAL A 126 ? N VAL A 125 O HIS A 129 ? O HIS A 128 B 5 6 O CYS A 134 ? O CYS A 133 N LEU A 48 ? N LEU A 47 B 6 7 O LEU A 49 ? O LEU A 48 N CYS A 39 ? N CYS A 38 C 1 2 N THR A 100 ? N THR A 99 O MSE A 108 ? O MSE A 107 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A ACT 158 ? 3 'BINDING SITE FOR RESIDUE ACT A 158' AC2 Software A ACT 159 ? 2 'BINDING SITE FOR RESIDUE ACT A 159' AC3 Software A ACT 160 ? 3 'BINDING SITE FOR RESIDUE ACT A 160' AC4 Software A ACT 161 ? 7 'BINDING SITE FOR RESIDUE ACT A 161' AC5 Software A ACT 162 ? 6 'BINDING SITE FOR RESIDUE ACT A 162' AC6 Software A SO4 163 ? 9 'BINDING SITE FOR RESIDUE SO4 A 163' AC7 Software A SO4 164 ? 8 'BINDING SITE FOR RESIDUE SO4 A 164' AC8 Software A SO4 165 ? 10 'BINDING SITE FOR RESIDUE SO4 A 165' AC9 Software A EDO 166 ? 5 'BINDING SITE FOR RESIDUE EDO A 166' BC1 Software A EDO 167 ? 9 'BINDING SITE FOR RESIDUE EDO A 167' BC2 Software A EDO 168 ? 7 'BINDING SITE FOR RESIDUE EDO A 168' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 3 ASN A 53 ? ASN A 52 . ? 1_555 ? 2 AC1 3 HIS A 129 ? HIS A 128 . ? 1_555 ? 3 AC1 3 HOH M . ? HOH A 169 . ? 2_556 ? 4 AC2 2 TYR A 150 ? TYR A 149 . ? 1_555 ? 5 AC2 2 HOH M . ? HOH A 301 . ? 1_555 ? 6 AC3 3 GLU A 60 ? GLU A 59 . ? 4_456 ? 7 AC3 3 ARG A 153 ? ARG A 152 . ? 1_555 ? 8 AC3 3 HOH M . ? HOH A 221 . ? 1_555 ? 9 AC4 7 SER A 40 ? SER A 39 . ? 1_555 ? 10 AC4 7 VAL A 41 ? VAL A 40 . ? 1_555 ? 11 AC4 7 THR A 42 ? THR A 41 . ? 1_555 ? 12 AC4 7 ASP A 43 ? ASP A 42 . ? 1_555 ? 13 AC4 7 HIS A 129 ? HIS A 128 . ? 2_556 ? 14 AC4 7 HOH M . ? HOH A 207 . ? 1_555 ? 15 AC4 7 HOH M . ? HOH A 210 . ? 1_555 ? 16 AC5 6 GLY A 26 ? GLY A 25 . ? 1_555 ? 17 AC5 6 GLU A 27 ? GLU A 26 . ? 1_555 ? 18 AC5 6 THR A 28 ? THR A 27 . ? 1_555 ? 19 AC5 6 HIS A 31 ? HIS A 30 . ? 1_555 ? 20 AC5 6 HIS A 61 ? HIS A 60 . ? 1_555 ? 21 AC5 6 ASN A 65 ? ASN A 64 . ? 1_555 ? 22 AC6 9 LYS A 124 ? LYS A 123 . ? 1_565 ? 23 AC6 9 LYS A 124 ? LYS A 123 . ? 2_566 ? 24 AC6 9 HIS A 125 ? HIS A 124 . ? 1_565 ? 25 AC6 9 HIS A 156 ? HIS A 155 . ? 1_555 ? 26 AC6 9 SER A 157 ? SER A 156 . ? 1_555 ? 27 AC6 9 HOH M . ? HOH A 194 . ? 1_565 ? 28 AC6 9 HOH M . ? HOH A 233 . ? 2_566 ? 29 AC6 9 HOH M . ? HOH A 289 . ? 2_566 ? 30 AC6 9 HOH M . ? HOH A 303 . ? 1_555 ? 31 AC7 8 GLY A 32 ? GLY A 31 . ? 1_555 ? 32 AC7 8 PHE A 33 ? PHE A 32 . ? 1_555 ? 33 AC7 8 ALA A 56 ? ALA A 55 . ? 1_555 ? 34 AC7 8 ARG A 57 ? ARG A 56 . ? 1_555 ? 35 AC7 8 ALA A 58 ? ALA A 57 . ? 1_555 ? 36 AC7 8 ARG A 93 ? ARG A 92 . ? 1_555 ? 37 AC7 8 HOH M . ? HOH A 232 . ? 1_555 ? 38 AC7 8 HOH M . ? HOH A 261 . ? 1_555 ? 39 AC8 10 HIS A 31 ? HIS A 30 . ? 1_555 ? 40 AC8 10 ARG A 57 ? ARG A 56 . ? 1_555 ? 41 AC8 10 HIS A 61 ? HIS A 60 . ? 1_555 ? 42 AC8 10 GLN A 90 ? GLN A 89 . ? 1_555 ? 43 AC8 10 HOH M . ? HOH A 213 . ? 1_555 ? 44 AC8 10 HOH M . ? HOH A 223 . ? 1_555 ? 45 AC8 10 HOH M . ? HOH A 231 . ? 4_446 ? 46 AC8 10 HOH M . ? HOH A 264 . ? 1_555 ? 47 AC8 10 HOH M . ? HOH A 288 . ? 4_446 ? 48 AC8 10 HOH M . ? HOH A 290 . ? 1_555 ? 49 AC9 5 ALA A 75 ? ALA A 74 . ? 1_545 ? 50 AC9 5 HIS A 125 ? HIS A 124 . ? 1_555 ? 51 AC9 5 HIS A 156 ? HIS A 155 . ? 1_545 ? 52 AC9 5 EDO K . ? EDO A 167 . ? 1_555 ? 53 AC9 5 HOH M . ? HOH A 194 . ? 1_555 ? 54 BC1 9 VAL A 63 ? VAL A 62 . ? 1_555 ? 55 BC1 9 ARG A 66 ? ARG A 65 . ? 1_555 ? 56 BC1 9 ALA A 75 ? ALA A 74 . ? 1_545 ? 57 BC1 9 GLU A 76 ? GLU A 75 . ? 1_545 ? 58 BC1 9 EDO J . ? EDO A 166 . ? 1_555 ? 59 BC1 9 HOH M . ? HOH A 183 . ? 1_545 ? 60 BC1 9 HOH M . ? HOH A 222 . ? 1_555 ? 61 BC1 9 HOH M . ? HOH A 245 . ? 1_555 ? 62 BC1 9 HOH M . ? HOH A 246 . ? 1_555 ? 63 BC2 7 VAL A 3 ? VAL A 2 . ? 2_556 ? 64 BC2 7 SER A 95 ? SER A 94 . ? 4_445 ? 65 BC2 7 LYS A 135 ? LYS A 134 . ? 1_555 ? 66 BC2 7 HOH M . ? HOH A 195 . ? 4_445 ? 67 BC2 7 HOH M . ? HOH A 208 . ? 1_555 ? 68 BC2 7 HOH M . ? HOH A 253 . ? 1_555 ? 69 BC2 7 HOH M . ? HOH A 260 . ? 1_555 ? # _atom_sites.entry_id 2R0X _atom_sites.fract_transf_matrix[1][1] 0.01388 _atom_sites.fract_transf_matrix[1][2] 0.00000 _atom_sites.fract_transf_matrix[1][3] 0.00666 _atom_sites.fract_transf_matrix[2][1] 0.00000 _atom_sites.fract_transf_matrix[2][2] 0.02574 _atom_sites.fract_transf_matrix[2][3] 0.00000 _atom_sites.fract_transf_matrix[3][1] 0.00000 _atom_sites.fract_transf_matrix[3][2] 0.00000 _atom_sites.fract_transf_matrix[3][3] 0.02290 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 0 ? ? ? A . n A 1 2 MSE 2 1 ? ? ? A . n A 1 3 VAL 3 2 2 VAL VAL A . n A 1 4 GLU 4 3 3 GLU GLU A . n A 1 5 VAL 5 4 4 VAL VAL A . n A 1 6 SER 6 5 5 SER SER A . n A 1 7 GLN 7 6 6 GLN GLN A . n A 1 8 PHE 8 7 7 PHE PHE A . n A 1 9 LYS 9 8 8 LYS LYS A . n A 1 10 ASP 10 9 9 ASP ASP A . n A 1 11 ALA 11 10 10 ALA ALA A . n A 1 12 MSE 12 11 11 MSE MSE A . n A 1 13 ALA 13 12 12 ALA ALA A . n A 1 14 GLN 14 13 13 GLN GLN A . n A 1 15 LEU 15 14 14 LEU LEU A . n A 1 16 ALA 16 15 15 ALA ALA A . n A 1 17 SER 17 16 16 SER SER A . n A 1 18 ALA 18 17 17 ALA ALA A . n A 1 19 VAL 19 18 18 VAL VAL A . n A 1 20 HIS 20 19 19 HIS HIS A . n A 1 21 ILE 21 20 20 ILE ILE A . n A 1 22 VAL 22 21 21 VAL VAL A . n A 1 23 THR 23 22 22 THR THR A . n A 1 24 THR 24 23 23 THR THR A . n A 1 25 SER 25 24 24 SER SER A . n A 1 26 GLY 26 25 25 GLY GLY A . n A 1 27 GLU 27 26 26 GLU GLU A . n A 1 28 THR 28 27 27 THR THR A . n A 1 29 GLY 29 28 28 GLY GLY A . n A 1 30 GLN 30 29 29 GLN GLN A . n A 1 31 HIS 31 30 30 HIS HIS A . n A 1 32 GLY 32 31 31 GLY GLY A . n A 1 33 PHE 33 32 32 PHE PHE A . n A 1 34 THR 34 33 33 THR THR A . n A 1 35 ALA 35 34 34 ALA ALA A . n A 1 36 SER 36 35 35 SER SER A . n A 1 37 ALA 37 36 36 ALA ALA A . n A 1 38 VAL 38 37 37 VAL VAL A . n A 1 39 CYS 39 38 38 CYS CYS A . n A 1 40 SER 40 39 39 SER SER A . n A 1 41 VAL 41 40 40 VAL VAL A . n A 1 42 THR 42 41 41 THR THR A . n A 1 43 ASP 43 42 42 ASP ASP A . n A 1 44 SER 44 43 43 SER SER A . n A 1 45 PRO 45 44 44 PRO PRO A . n A 1 46 PRO 46 45 45 PRO PRO A . n A 1 47 THR 47 46 46 THR THR A . n A 1 48 LEU 48 47 47 LEU LEU A . n A 1 49 LEU 49 48 48 LEU LEU A . n A 1 50 VAL 50 49 49 VAL VAL A . n A 1 51 CYS 51 50 50 CYS CYS A . n A 1 52 ILE 52 51 51 ILE ILE A . n A 1 53 ASN 53 52 52 ASN ASN A . n A 1 54 SER 54 53 53 SER SER A . n A 1 55 ASN 55 54 54 ASN ASN A . n A 1 56 ALA 56 55 55 ALA ALA A . n A 1 57 ARG 57 56 56 ARG ARG A . n A 1 58 ALA 58 57 57 ALA ALA A . n A 1 59 TYR 59 58 58 TYR TYR A . n A 1 60 GLU 60 59 59 GLU GLU A . n A 1 61 HIS 61 60 60 HIS HIS A . n A 1 62 PHE 62 61 61 PHE PHE A . n A 1 63 VAL 63 62 62 VAL VAL A . n A 1 64 LYS 64 63 63 LYS LYS A . n A 1 65 ASN 65 64 64 ASN ASN A . n A 1 66 ARG 66 65 65 ARG ARG A . n A 1 67 VAL 67 66 66 VAL VAL A . n A 1 68 LEU 68 67 67 LEU LEU A . n A 1 69 MSE 69 68 68 MSE MSE A . n A 1 70 VAL 70 69 69 VAL VAL A . n A 1 71 ASN 71 70 70 ASN ASN A . n A 1 72 THR 72 71 71 THR THR A . n A 1 73 LEU 73 72 72 LEU LEU A . n A 1 74 THR 74 73 73 THR THR A . n A 1 75 ALA 75 74 74 ALA ALA A . n A 1 76 GLU 76 75 75 GLU GLU A . n A 1 77 GLN 77 76 76 GLN GLN A . n A 1 78 SER 78 77 77 SER SER A . n A 1 79 SER 79 78 78 SER SER A . n A 1 80 LEU 80 79 79 LEU LEU A . n A 1 81 SER 81 80 80 SER SER A . n A 1 82 ASN 82 81 81 ASN ASN A . n A 1 83 ILE 83 82 82 ILE ILE A . n A 1 84 PHE 84 83 83 PHE PHE A . n A 1 85 ALA 85 84 84 ALA ALA A . n A 1 86 SER 86 85 85 SER SER A . n A 1 87 PRO 87 86 86 PRO PRO A . n A 1 88 LEU 88 87 87 LEU LEU A . n A 1 89 SER 89 88 88 SER SER A . n A 1 90 GLN 90 89 89 GLN GLN A . n A 1 91 GLU 91 90 90 GLU GLU A . n A 1 92 GLU 92 91 91 GLU GLU A . n A 1 93 ARG 93 92 92 ARG ARG A . n A 1 94 PHE 94 93 93 PHE PHE A . n A 1 95 SER 95 94 94 SER SER A . n A 1 96 ASN 96 95 95 ASN ASN A . n A 1 97 ALA 97 96 96 ALA ALA A . n A 1 98 SER 98 97 97 SER SER A . n A 1 99 TRP 99 98 98 TRP TRP A . n A 1 100 THR 100 99 99 THR THR A . n A 1 101 THR 101 100 100 THR THR A . n A 1 102 LEU 102 101 101 LEU LEU A . n A 1 103 THR 103 102 102 THR THR A . n A 1 104 THR 104 103 103 THR THR A . n A 1 105 GLY 105 104 104 GLY GLY A . n A 1 106 SER 106 105 105 SER SER A . n A 1 107 PRO 107 106 106 PRO PRO A . n A 1 108 MSE 108 107 107 MSE MSE A . n A 1 109 LEU 109 108 108 LEU LEU A . n A 1 110 GLN 110 109 109 GLN GLN A . n A 1 111 ASP 111 110 110 ASP ASP A . n A 1 112 ALA 112 111 111 ALA ALA A . n A 1 113 LEU 113 112 112 LEU LEU A . n A 1 114 ILE 114 113 113 ILE ILE A . n A 1 115 ASN 115 114 114 ASN ASN A . n A 1 116 PHE 116 115 115 PHE PHE A . n A 1 117 ASP 117 116 116 ASP ASP A . n A 1 118 CYS 118 117 117 CYS CYS A . n A 1 119 GLU 119 118 118 GLU GLU A . n A 1 120 ILE 120 119 119 ILE ILE A . n A 1 121 THR 121 120 120 THR THR A . n A 1 122 GLU 122 121 121 GLU GLU A . n A 1 123 ILE 123 122 122 ILE ILE A . n A 1 124 LYS 124 123 123 LYS LYS A . n A 1 125 HIS 125 124 124 HIS HIS A . n A 1 126 VAL 126 125 125 VAL VAL A . n A 1 127 GLY 127 126 126 GLY GLY A . n A 1 128 THR 128 127 127 THR THR A . n A 1 129 HIS 129 128 128 HIS HIS A . n A 1 130 ASP 130 129 129 ASP ASP A . n A 1 131 ILE 131 130 130 ILE ILE A . n A 1 132 LEU 132 131 131 LEU LEU A . n A 1 133 ILE 133 132 132 ILE ILE A . n A 1 134 CYS 134 133 133 CYS CYS A . n A 1 135 LYS 135 134 134 LYS LYS A . n A 1 136 ILE 136 135 135 ILE ILE A . n A 1 137 VAL 137 136 136 VAL VAL A . n A 1 138 ASP 138 137 137 ASP ASP A . n A 1 139 ILE 139 138 138 ILE ILE A . n A 1 140 HIS 140 139 139 HIS HIS A . n A 1 141 GLN 141 140 140 GLN GLN A . n A 1 142 SER 142 141 141 SER SER A . n A 1 143 ASN 143 142 142 ASN ASN A . n A 1 144 ALA 144 143 143 ALA ALA A . n A 1 145 LYS 145 144 144 LYS LYS A . n A 1 146 ASN 146 145 145 ASN ASN A . n A 1 147 ALA 147 146 146 ALA ALA A . n A 1 148 LEU 148 147 147 LEU LEU A . n A 1 149 VAL 149 148 148 VAL VAL A . n A 1 150 TYR 150 149 149 TYR TYR A . n A 1 151 ARG 151 150 150 ARG ARG A . n A 1 152 ASN 152 151 151 ASN ASN A . n A 1 153 ARG 153 152 152 ARG ARG A . n A 1 154 VAL 154 153 153 VAL VAL A . n A 1 155 TYR 155 154 154 TYR TYR A . n A 1 156 HIS 156 155 155 HIS HIS A . n A 1 157 SER 157 156 156 SER SER A . n A 1 158 VAL 158 157 157 VAL VAL A . n # _pdbx_SG_project.project_name 'PSI, Protein Structure Initiative' _pdbx_SG_project.full_name_of_center 'Joint Center for Structural Genomics' _pdbx_SG_project.id 1 _pdbx_SG_project.initial_of_center JCSG # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ACT 1 158 1 ACT ACT A . C 2 ACT 1 159 2 ACT ACT A . D 2 ACT 1 160 3 ACT ACT A . E 2 ACT 1 161 4 ACT ACT A . F 2 ACT 1 162 5 ACT ACT A . G 3 SO4 1 163 6 SO4 SO4 A . H 3 SO4 1 164 7 SO4 SO4 A . I 3 SO4 1 165 8 SO4 SO4 A . J 4 EDO 1 166 9 EDO EDO A . K 4 EDO 1 167 10 EDO EDO A . L 4 EDO 1 168 11 EDO EDO A . M 5 HOH 1 169 12 HOH HOH A . M 5 HOH 2 170 13 HOH HOH A . M 5 HOH 3 171 14 HOH HOH A . M 5 HOH 4 172 15 HOH HOH A . M 5 HOH 5 173 16 HOH HOH A . M 5 HOH 6 174 17 HOH HOH A . M 5 HOH 7 175 18 HOH HOH A . M 5 HOH 8 176 19 HOH HOH A . M 5 HOH 9 177 20 HOH HOH A . M 5 HOH 10 178 21 HOH HOH A . M 5 HOH 11 179 22 HOH HOH A . M 5 HOH 12 180 23 HOH HOH A . M 5 HOH 13 181 24 HOH HOH A . M 5 HOH 14 182 25 HOH HOH A . M 5 HOH 15 183 26 HOH HOH A . M 5 HOH 16 184 27 HOH HOH A . M 5 HOH 17 185 28 HOH HOH A . M 5 HOH 18 186 29 HOH HOH A . M 5 HOH 19 187 30 HOH HOH A . M 5 HOH 20 188 31 HOH HOH A . M 5 HOH 21 189 32 HOH HOH A . M 5 HOH 22 190 33 HOH HOH A . M 5 HOH 23 191 34 HOH HOH A . M 5 HOH 24 192 35 HOH HOH A . M 5 HOH 25 193 36 HOH HOH A . M 5 HOH 26 194 37 HOH HOH A . M 5 HOH 27 195 38 HOH HOH A . M 5 HOH 28 196 39 HOH HOH A . M 5 HOH 29 197 40 HOH HOH A . M 5 HOH 30 198 41 HOH HOH A . M 5 HOH 31 199 42 HOH HOH A . M 5 HOH 32 200 43 HOH HOH A . M 5 HOH 33 201 44 HOH HOH A . M 5 HOH 34 202 45 HOH HOH A . M 5 HOH 35 203 46 HOH HOH A . M 5 HOH 36 204 47 HOH HOH A . M 5 HOH 37 205 48 HOH HOH A . M 5 HOH 38 206 49 HOH HOH A . M 5 HOH 39 207 50 HOH HOH A . M 5 HOH 40 208 51 HOH HOH A . M 5 HOH 41 209 52 HOH HOH A . M 5 HOH 42 210 53 HOH HOH A . M 5 HOH 43 211 54 HOH HOH A . M 5 HOH 44 212 55 HOH HOH A . M 5 HOH 45 213 56 HOH HOH A . M 5 HOH 46 214 57 HOH HOH A . M 5 HOH 47 215 58 HOH HOH A . M 5 HOH 48 216 59 HOH HOH A . M 5 HOH 49 217 60 HOH HOH A . M 5 HOH 50 218 61 HOH HOH A . M 5 HOH 51 219 62 HOH HOH A . M 5 HOH 52 220 63 HOH HOH A . M 5 HOH 53 221 64 HOH HOH A . M 5 HOH 54 222 65 HOH HOH A . M 5 HOH 55 223 66 HOH HOH A . M 5 HOH 56 224 67 HOH HOH A . M 5 HOH 57 225 68 HOH HOH A . M 5 HOH 58 226 69 HOH HOH A . M 5 HOH 59 227 70 HOH HOH A . M 5 HOH 60 228 71 HOH HOH A . M 5 HOH 61 229 72 HOH HOH A . M 5 HOH 62 230 73 HOH HOH A . M 5 HOH 63 231 74 HOH HOH A . M 5 HOH 64 232 75 HOH HOH A . M 5 HOH 65 233 76 HOH HOH A . M 5 HOH 66 234 77 HOH HOH A . M 5 HOH 67 235 78 HOH HOH A . M 5 HOH 68 236 79 HOH HOH A . M 5 HOH 69 237 80 HOH HOH A . M 5 HOH 70 238 81 HOH HOH A . M 5 HOH 71 239 82 HOH HOH A . M 5 HOH 72 240 83 HOH HOH A . M 5 HOH 73 241 84 HOH HOH A . M 5 HOH 74 242 85 HOH HOH A . M 5 HOH 75 243 86 HOH HOH A . M 5 HOH 76 244 87 HOH HOH A . M 5 HOH 77 245 88 HOH HOH A . M 5 HOH 78 246 89 HOH HOH A . M 5 HOH 79 247 90 HOH HOH A . M 5 HOH 80 248 91 HOH HOH A . M 5 HOH 81 249 92 HOH HOH A . M 5 HOH 82 250 93 HOH HOH A . M 5 HOH 83 251 94 HOH HOH A . M 5 HOH 84 252 95 HOH HOH A . M 5 HOH 85 253 96 HOH HOH A . M 5 HOH 86 254 97 HOH HOH A . M 5 HOH 87 255 98 HOH HOH A . M 5 HOH 88 256 99 HOH HOH A . M 5 HOH 89 257 100 HOH HOH A . M 5 HOH 90 258 101 HOH HOH A . M 5 HOH 91 259 102 HOH HOH A . M 5 HOH 92 260 103 HOH HOH A . M 5 HOH 93 261 104 HOH HOH A . M 5 HOH 94 262 105 HOH HOH A . M 5 HOH 95 263 106 HOH HOH A . M 5 HOH 96 264 107 HOH HOH A . M 5 HOH 97 265 108 HOH HOH A . M 5 HOH 98 266 109 HOH HOH A . M 5 HOH 99 267 110 HOH HOH A . M 5 HOH 100 268 111 HOH HOH A . M 5 HOH 101 269 112 HOH HOH A . M 5 HOH 102 270 113 HOH HOH A . M 5 HOH 103 271 114 HOH HOH A . M 5 HOH 104 272 115 HOH HOH A . M 5 HOH 105 273 116 HOH HOH A . M 5 HOH 106 274 117 HOH HOH A . M 5 HOH 107 275 118 HOH HOH A . M 5 HOH 108 276 119 HOH HOH A . M 5 HOH 109 277 120 HOH HOH A . M 5 HOH 110 278 121 HOH HOH A . M 5 HOH 111 279 122 HOH HOH A . M 5 HOH 112 280 123 HOH HOH A . M 5 HOH 113 281 124 HOH HOH A . M 5 HOH 114 282 125 HOH HOH A . M 5 HOH 115 283 126 HOH HOH A . M 5 HOH 116 284 127 HOH HOH A . M 5 HOH 117 285 128 HOH HOH A . M 5 HOH 118 286 129 HOH HOH A . M 5 HOH 119 287 130 HOH HOH A . M 5 HOH 120 288 131 HOH HOH A . M 5 HOH 121 289 132 HOH HOH A . M 5 HOH 122 290 133 HOH HOH A . M 5 HOH 123 291 134 HOH HOH A . M 5 HOH 124 292 135 HOH HOH A . M 5 HOH 125 293 136 HOH HOH A . M 5 HOH 126 294 137 HOH HOH A . M 5 HOH 127 295 138 HOH HOH A . M 5 HOH 128 296 139 HOH HOH A . M 5 HOH 129 297 140 HOH HOH A . M 5 HOH 130 298 141 HOH HOH A . M 5 HOH 131 299 142 HOH HOH A . M 5 HOH 132 300 143 HOH HOH A . M 5 HOH 133 301 144 HOH HOH A . M 5 HOH 134 302 145 HOH HOH A . M 5 HOH 135 303 146 HOH HOH A . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 12 A MSE 11 ? MET SELENOMETHIONINE 2 A MSE 69 A MSE 68 ? MET SELENOMETHIONINE 3 A MSE 108 A MSE 107 ? MET SELENOMETHIONINE # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M # _pdbx_struct_assembly_prop.biol_id 1 _pdbx_struct_assembly_prop.type 'ABSA (A^2)' _pdbx_struct_assembly_prop.value 8260 _pdbx_struct_assembly_prop.details ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 2_556 -x,y,-z+1 -1.0000000000 0.0000000000 0.0000000000 -20.9531040927 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 43.6738025466 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2007-09-04 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2017-10-25 4 'Structure model' 1 3 2019-07-24 5 'Structure model' 1 4 2023-01-25 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Author supporting evidence' 3 3 'Structure model' 'Refinement description' 4 4 'Structure model' 'Data collection' 5 4 'Structure model' 'Derived calculations' 6 4 'Structure model' 'Refinement description' 7 5 'Structure model' 'Database references' 8 5 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' pdbx_struct_assembly_auth_evidence 2 3 'Structure model' software 3 4 'Structure model' software 4 4 'Structure model' struct_conn 5 5 'Structure model' database_2 6 5 'Structure model' struct_ref_seq_dif 7 5 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_software.classification' 2 3 'Structure model' '_software.name' 3 4 'Structure model' '_software.classification' 4 4 'Structure model' '_software.contact_author' 5 4 'Structure model' '_software.contact_author_email' 6 4 'Structure model' '_software.language' 7 4 'Structure model' '_software.location' 8 4 'Structure model' '_software.name' 9 4 'Structure model' '_software.type' 10 4 'Structure model' '_software.version' 11 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 12 5 'Structure model' '_database_2.pdbx_DOI' 13 5 'Structure model' '_database_2.pdbx_database_accession' 14 5 'Structure model' '_struct_ref_seq_dif.details' 15 5 'Structure model' '_struct_site.pdbx_auth_asym_id' 16 5 'Structure model' '_struct_site.pdbx_auth_comp_id' 17 5 'Structure model' '_struct_site.pdbx_auth_seq_id' # _phasing.method MAD # loop_ _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id _software.pdbx_ordinal REFMAC 5.2.0019 ? program 'Murshudov, G.N.' ccp4@dl.ac.uk refinement http://www.ccp4.ac.uk/main.html Fortran_77 ? 1 PHENIX . ? package 'P.D. Adams' PDAdams@lbl.gov refinement http://www.phenix-online.org/ C++ ? 2 SHELX . ? package 'George Sheldrick' gsheldr@shelx.uni-ac.gwdg.de phasing http://shelx.uni-ac.gwdg.de/SHELX/ Fortran_77 ? 3 MolProbity 3beta29 ? package 'D.C. & J.S. Richardson lab' molprobity@kinemage.biochem.duke.edu 'model building' http://kinemage.biochem.duke.edu/molprobity/ ? ? 4 XSCALE . ? package 'Wolfgang Kabsch' ? 'data scaling' http://www.mpimf-heidelberg.mpg.de/~kabsch/xds/xscale_program.html ? ? 5 PDB_EXTRACT 2.000 'April. 3, 2006' package PDB sw-help@rcsb.rutgers.edu 'data extraction' http://pdb.rutgers.edu/software/ C++ ? 6 MAR345 CCD ? ? ? ? 'data collection' ? ? ? 7 XDS . ? ? ? ? 'data reduction' ? ? ? 8 SHELXD . ? ? ? ? phasing ? ? ? 9 autoSHARP . ? ? ? ? phasing ? ? ? 10 # loop_ _pdbx_database_remark.id _pdbx_database_remark.text 300 ; BIOMOLECULE: 1 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND PROGRAM GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON BURIED SURFACE AREA. CRYSTAL STRUCTURE PACKING SUGGESTS THAT THE BIOLOGICALLY RELEVANT FORM IS A DIMER. SIZE EXCLUSION CHROMATOGRAPHY SUPPORTS THE ASSIGNMENT OF A DIMER AS A SIGNIFICANT OLIGOMERIZATION STATE. ; 999 ; SEQUENCE THE CONSTRUCT WAS EXPRESSED WITH A PURIFICATION TAG MGSDKIHHHHHHENLYFQG. THE TAG WAS REMOVED WITH TEV PROTEASE LEAVING ONLY A GLYCINE FOLLOWED BY THE TARGET SEQUENCE. ; # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 VAL A 40 ? A -121.20 -58.61 2 1 THR A 99 ? A -137.56 -157.15 3 1 LEU A 101 ? ? -108.52 -94.11 4 1 LEU A 101 ? ? -108.52 -93.60 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A GLU 3 ? CD ? A GLU 4 CD 2 1 Y 1 A GLU 3 ? OE1 ? A GLU 4 OE1 3 1 Y 1 A GLU 3 ? OE2 ? A GLU 4 OE2 4 1 Y 1 A GLN 6 ? CD ? A GLN 7 CD 5 1 Y 1 A GLN 6 ? OE1 ? A GLN 7 OE1 6 1 Y 1 A GLN 6 ? NE2 ? A GLN 7 NE2 7 1 Y 1 A LYS 8 ? CE ? A LYS 9 CE 8 1 Y 1 A LYS 8 ? NZ ? A LYS 9 NZ 9 1 Y 1 A THR 27 ? OG1 ? A THR 28 OG1 10 1 Y 1 A THR 27 ? CG2 ? A THR 28 CG2 11 1 Y 1 A LYS 63 ? CD ? A LYS 64 CD 12 1 Y 1 A LYS 63 ? CE ? A LYS 64 CE 13 1 Y 1 A LYS 63 ? NZ ? A LYS 64 NZ 14 1 Y 1 A GLU 90 ? CD ? A GLU 91 CD 15 1 Y 1 A GLU 90 ? OE1 ? A GLU 91 OE1 16 1 Y 1 A GLU 90 ? OE2 ? A GLU 91 OE2 17 1 Y 1 A ASN 142 ? CG ? A ASN 143 CG 18 1 Y 1 A ASN 142 ? OD1 ? A ASN 143 OD1 19 1 Y 1 A ASN 142 ? ND2 ? A ASN 143 ND2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 0 ? A GLY 1 2 1 Y 1 A MSE 1 ? A MSE 2 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'ACETATE ION' ACT 3 'SULFATE ION' SO4 4 1,2-ETHANEDIOL EDO 5 water HOH # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'gel filtration' _pdbx_struct_assembly_auth_evidence.details ? #