data_2R2U # _entry.id 2R2U # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.377 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2R2U pdb_00002r2u 10.2210/pdb2r2u/pdb NDB PD1033 ? ? RCSB RCSB044354 ? ? WWPDB D_1000044354 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 2R2R 'd(ATTAGTTATAACTAAT) complexed with MMLV RT catalytic fragment' unspecified PDB 2R2S 'Co(III)bleomycinB2 bound to d(ATTAGTTATAACTAAT) complexed with MMLV RT catalytic fragment' unspecified PDB 2R2T 'd(ATTTAGTTAACTAAAT) complexed with MMLV RT catalytic fragment' unspecified # _pdbx_database_status.entry_id 2R2U _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2007-08-27 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Goodwin, K.D.' 1 'Lewis, M.A.' 2 'Long, E.C.' 3 'Georgiadis, M.M.' 4 # _citation.id primary _citation.title 'Crystal structure of DNA-bound Co(III) bleomycin B2: Insights on intercalation and minor groove binding.' _citation.journal_abbrev Proc.Natl.Acad.Sci.Usa _citation.journal_volume 105 _citation.page_first 5052 _citation.page_last 5056 _citation.year 2008 _citation.journal_id_ASTM PNASA6 _citation.country US _citation.journal_id_ISSN 0027-8424 _citation.journal_id_CSD 0040 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 18362349 _citation.pdbx_database_id_DOI 10.1073/pnas.0708143105 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Goodwin, K.D.' 1 ? primary 'Lewis, M.A.' 2 ? primary 'Long, E.C.' 3 ? primary 'Georgiadis, M.M.' 4 ? # _cell.length_a 55.689 _cell.length_b 146.191 _cell.length_c 46.931 _cell.angle_alpha 90.000 _cell.angle_beta 90.000 _cell.angle_gamma 90.000 _cell.entry_id 2R2U _cell.pdbx_unique_axis ? _cell.Z_PDB 4 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.space_group_name_H-M 'P 21 21 2' _symmetry.entry_id 2R2U _symmetry.Int_Tables_number 18 _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn ;DNA (5'-D(*DAP*DTP*DTP*DTP*DAP*DGP*DT)-3') ; 2127.433 1 ? ? ? ? 2 polymer syn ;DNA (5'-D(P*DTP*DAP*DCP*DTP*DAP*DAP*DAP*DT)-3') ; 2409.630 1 ? ? ? ? 3 polymer man 'Reverse transcriptase' 28934.287 1 2.7.7.49 ? 'residues 144-398' ? 4 non-polymer syn "N-(4-{[amino(imino)methyl]amino}butyl)-2,4'-bi-1,3-thiazole-4-carboxamide" 324.425 1 ? ? ? ? 5 water nat water 18.015 108 ? ? ? ? # _entity_name_com.entity_id 3 _entity_name_com.name RT # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 polydeoxyribonucleotide no no '(DA)(DT)(DT)(DT)(DA)(DG)(DT)' ATTTAGT B ? 2 polydeoxyribonucleotide no no '(DT)(DA)(DC)(DT)(DA)(DA)(DA)(DT)' TACTAAAT G ? 3 'polypeptide(L)' no no ;TWLSDFPQAWAETGGMGLAVRQAPLIIPLKATSTPVSIKQYPMSQEARLGIKPHIQRLLDQGILVPCQSPWNTPLLPVKK PGTNDYRPVQDLREVNKRVEDIHPTVPNPYNLLSGLPPSHQWYTVLDLKDAFFCLRLHPTSQPLFAFEWRDPEMGISGQL TWTRLPQGFKNSPTLFDEALHRDLADFRIQHPDLILLQYVDDLLLAATSELDCQQGTRALLQTLGNLGYRASAKKAQICQ KQVKYLGYLLKEGQR ; ;TWLSDFPQAWAETGGMGLAVRQAPLIIPLKATSTPVSIKQYPMSQEARLGIKPHIQRLLDQGILVPCQSPWNTPLLPVKK PGTNDYRPVQDLREVNKRVEDIHPTVPNPYNLLSGLPPSHQWYTVLDLKDAFFCLRLHPTSQPLFAFEWRDPEMGISGQL TWTRLPQGFKNSPTLFDEALHRDLADFRIQHPDLILLQYVDDLLLAATSELDCQQGTRALLQTLGNLGYRASAKKAQICQ KQVKYLGYLLKEGQR ; A ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 DA n 1 2 DT n 1 3 DT n 1 4 DT n 1 5 DA n 1 6 DG n 1 7 DT n 2 1 DT n 2 2 DA n 2 3 DC n 2 4 DT n 2 5 DA n 2 6 DA n 2 7 DA n 2 8 DT n 3 1 THR n 3 2 TRP n 3 3 LEU n 3 4 SER n 3 5 ASP n 3 6 PHE n 3 7 PRO n 3 8 GLN n 3 9 ALA n 3 10 TRP n 3 11 ALA n 3 12 GLU n 3 13 THR n 3 14 GLY n 3 15 GLY n 3 16 MET n 3 17 GLY n 3 18 LEU n 3 19 ALA n 3 20 VAL n 3 21 ARG n 3 22 GLN n 3 23 ALA n 3 24 PRO n 3 25 LEU n 3 26 ILE n 3 27 ILE n 3 28 PRO n 3 29 LEU n 3 30 LYS n 3 31 ALA n 3 32 THR n 3 33 SER n 3 34 THR n 3 35 PRO n 3 36 VAL n 3 37 SER n 3 38 ILE n 3 39 LYS n 3 40 GLN n 3 41 TYR n 3 42 PRO n 3 43 MET n 3 44 SER n 3 45 GLN n 3 46 GLU n 3 47 ALA n 3 48 ARG n 3 49 LEU n 3 50 GLY n 3 51 ILE n 3 52 LYS n 3 53 PRO n 3 54 HIS n 3 55 ILE n 3 56 GLN n 3 57 ARG n 3 58 LEU n 3 59 LEU n 3 60 ASP n 3 61 GLN n 3 62 GLY n 3 63 ILE n 3 64 LEU n 3 65 VAL n 3 66 PRO n 3 67 CYS n 3 68 GLN n 3 69 SER n 3 70 PRO n 3 71 TRP n 3 72 ASN n 3 73 THR n 3 74 PRO n 3 75 LEU n 3 76 LEU n 3 77 PRO n 3 78 VAL n 3 79 LYS n 3 80 LYS n 3 81 PRO n 3 82 GLY n 3 83 THR n 3 84 ASN n 3 85 ASP n 3 86 TYR n 3 87 ARG n 3 88 PRO n 3 89 VAL n 3 90 GLN n 3 91 ASP n 3 92 LEU n 3 93 ARG n 3 94 GLU n 3 95 VAL n 3 96 ASN n 3 97 LYS n 3 98 ARG n 3 99 VAL n 3 100 GLU n 3 101 ASP n 3 102 ILE n 3 103 HIS n 3 104 PRO n 3 105 THR n 3 106 VAL n 3 107 PRO n 3 108 ASN n 3 109 PRO n 3 110 TYR n 3 111 ASN n 3 112 LEU n 3 113 LEU n 3 114 SER n 3 115 GLY n 3 116 LEU n 3 117 PRO n 3 118 PRO n 3 119 SER n 3 120 HIS n 3 121 GLN n 3 122 TRP n 3 123 TYR n 3 124 THR n 3 125 VAL n 3 126 LEU n 3 127 ASP n 3 128 LEU n 3 129 LYS n 3 130 ASP n 3 131 ALA n 3 132 PHE n 3 133 PHE n 3 134 CYS n 3 135 LEU n 3 136 ARG n 3 137 LEU n 3 138 HIS n 3 139 PRO n 3 140 THR n 3 141 SER n 3 142 GLN n 3 143 PRO n 3 144 LEU n 3 145 PHE n 3 146 ALA n 3 147 PHE n 3 148 GLU n 3 149 TRP n 3 150 ARG n 3 151 ASP n 3 152 PRO n 3 153 GLU n 3 154 MET n 3 155 GLY n 3 156 ILE n 3 157 SER n 3 158 GLY n 3 159 GLN n 3 160 LEU n 3 161 THR n 3 162 TRP n 3 163 THR n 3 164 ARG n 3 165 LEU n 3 166 PRO n 3 167 GLN n 3 168 GLY n 3 169 PHE n 3 170 LYS n 3 171 ASN n 3 172 SER n 3 173 PRO n 3 174 THR n 3 175 LEU n 3 176 PHE n 3 177 ASP n 3 178 GLU n 3 179 ALA n 3 180 LEU n 3 181 HIS n 3 182 ARG n 3 183 ASP n 3 184 LEU n 3 185 ALA n 3 186 ASP n 3 187 PHE n 3 188 ARG n 3 189 ILE n 3 190 GLN n 3 191 HIS n 3 192 PRO n 3 193 ASP n 3 194 LEU n 3 195 ILE n 3 196 LEU n 3 197 LEU n 3 198 GLN n 3 199 TYR n 3 200 VAL n 3 201 ASP n 3 202 ASP n 3 203 LEU n 3 204 LEU n 3 205 LEU n 3 206 ALA n 3 207 ALA n 3 208 THR n 3 209 SER n 3 210 GLU n 3 211 LEU n 3 212 ASP n 3 213 CYS n 3 214 GLN n 3 215 GLN n 3 216 GLY n 3 217 THR n 3 218 ARG n 3 219 ALA n 3 220 LEU n 3 221 LEU n 3 222 GLN n 3 223 THR n 3 224 LEU n 3 225 GLY n 3 226 ASN n 3 227 LEU n 3 228 GLY n 3 229 TYR n 3 230 ARG n 3 231 ALA n 3 232 SER n 3 233 ALA n 3 234 LYS n 3 235 LYS n 3 236 ALA n 3 237 GLN n 3 238 ILE n 3 239 CYS n 3 240 GLN n 3 241 LYS n 3 242 GLN n 3 243 VAL n 3 244 LYS n 3 245 TYR n 3 246 LEU n 3 247 GLY n 3 248 TYR n 3 249 LEU n 3 250 LEU n 3 251 LYS n 3 252 GLU n 3 253 GLY n 3 254 GLN n 3 255 ARG n # _entity_src_gen.entity_id 3 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name MoMLV _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene pol _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Moloney murine leukemia virus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 11801 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform 1 UNP POL_MLVMO P03355 3 ;TWLSDFPQAWAETGGMGLAVRQAPLIIPLKATSTPVSIKQYPMSQEARLGIKPHIQRLLDQGILVPCQSPWNTPLLPVKK PGTNDYRPVQDLREVNKRVEDIHPTVPNPYNLLSGLPPSHQWYTVLDLKDAFFCLRLHPTSQPLFAFEWRDPEMGISGQL TWTRLPQGFKNSPTLFDEALHRDLADFRIQHPDLILLQYVDDLLLAATSELDCQQGTRALLQTLGNLGYRASAKKAQICQ KQVKYLGYLLKEGQR ; 144 ? 2 PDB 2R2U 2R2U 1 ? ? ? 3 PDB 2R2U 2R2U 2 ? ? ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 2R2U A 1 ? 255 ? P03355 144 ? 398 ? 24 278 2 2 2R2U B 1 ? 7 ? 2R2U 1 ? 7 ? 1 7 3 3 2R2U G 1 ? 8 ? 2R2U 9 ? 16 ? 9 16 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 BTZ non-polymer . "N-(4-{[amino(imino)methyl]amino}butyl)-2,4'-bi-1,3-thiazole-4-carboxamide" ? 'C12 H16 N6 O S2' 324.425 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.crystals_number 1 _exptl.entry_id 2R2U _exptl.method 'X-RAY DIFFRACTION' # _exptl_crystal.id 1 _exptl_crystal.density_Matthews 2.85 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 56.90 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION' _exptl_crystal_grow.pH 6.5 _exptl_crystal_grow.temp 293 _exptl_crystal_grow.pdbx_details 'PEG 4000, MgCl2, pH 6.5, vapor diffusion, temperature 293K' _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_pH_range . # loop_ _exptl_crystal_grow_comp.crystal_id _exptl_crystal_grow_comp.id _exptl_crystal_grow_comp.sol_id _exptl_crystal_grow_comp.name _exptl_crystal_grow_comp.conc _exptl_crystal_grow_comp.volume _exptl_crystal_grow_comp.details 1 1 1 'PEG 4000' ? ? ? 1 2 1 MgCl2 ? ? ? 1 3 2 'PEG 4000' ? ? ? 1 4 2 MgCl2 ? ? ? # _diffrn.id 1 _diffrn.ambient_temp 93 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 315' _diffrn_detector.pdbx_collection_date 2007-02-27 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.monochromator 'SI 111' _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.068828 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'APS BEAMLINE 19-ID' _diffrn_source.pdbx_wavelength_list 1.068828 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_site APS _diffrn_source.pdbx_synchrotron_beamline 19-ID # _reflns.entry_id 2R2U _reflns.d_resolution_high 2.30 _reflns.d_resolution_low 30.000 _reflns.number_obs 16721 _reflns.pdbx_Rmerge_I_obs 0.072 _reflns.pdbx_netI_over_sigmaI 11.100 _reflns.pdbx_chi_squared 1.006 _reflns.pdbx_redundancy 4.200 _reflns.percent_possible_obs 96.100 _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.number_all ? _reflns.pdbx_Rsym_value ? _reflns.B_iso_Wilson_estimate ? _reflns.R_free_details ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.number_measured_obs _reflns_shell.number_measured_all _reflns_shell.number_unique_obs _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_redundancy _reflns_shell.percent_possible_obs _reflns_shell.number_unique_all _reflns_shell.percent_possible_all _reflns_shell.pdbx_diffrn_id _reflns_shell.pdbx_ordinal 2.30 2.38 ? ? ? 0.339 ? ? 0.892 2.80 ? 1370 81.30 ? 1 2.38 2.48 ? ? ? 0.299 ? ? 0.955 3.60 ? 1549 91.20 ? 2 2.48 2.59 ? ? ? 0.260 ? ? 0.981 4.10 ? 1675 97.30 ? 3 2.59 2.73 ? ? ? 0.226 ? ? 0.995 4.50 ? 1689 99.10 ? 4 2.73 2.90 ? ? ? 0.167 ? ? 1.049 4.70 ? 1723 99.80 ? 5 2.90 3.12 ? ? ? 0.126 ? ? 1.031 4.60 ? 1713 99.80 ? 6 3.12 3.43 ? ? ? 0.086 ? ? 1.015 4.50 ? 1715 99.40 ? 7 3.43 3.93 ? ? ? 0.061 ? ? 1.060 4.40 ? 1723 98.60 ? 8 3.93 4.95 ? ? ? 0.050 ? ? 0.991 4.50 ? 1749 98.50 ? 9 4.95 30.00 ? ? ? 0.039 ? ? 1.000 4.40 ? 1815 95.70 ? 10 # _refine.entry_id 2R2U _refine.ls_d_res_high 2.30 _refine.ls_d_res_low 30.000 _refine.pdbx_ls_sigma_F 0.00 _refine.ls_percent_reflns_obs 91.200 _refine.ls_number_reflns_obs 16181 _refine.ls_R_factor_R_work 0.241 _refine.ls_R_factor_R_free 0.282 _refine.ls_percent_reflns_R_free 4.500 _refine.ls_number_reflns_R_free 799 _refine.B_iso_mean 48.152 _refine.solvent_model_param_bsol 36.896 _refine.aniso_B[1][1] -7.600 _refine.aniso_B[2][2] -2.598 _refine.aniso_B[3][3] 10.198 _refine.aniso_B[1][2] 0.000 _refine.aniso_B[1][3] 0.000 _refine.aniso_B[2][3] 0.000 _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_ls_sigma_I ? _refine.ls_number_reflns_all ? _refine.ls_R_factor_all ? _refine.ls_R_factor_obs ? _refine.ls_redundancy_reflns_obs ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_starting_model 1ZTW _refine.pdbx_ls_cross_valid_method ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_stereochemistry_target_values ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.pdbx_isotropic_thermal_model ? _refine.details ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_overall_ESU_R ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2041 _refine_hist.pdbx_number_atoms_nucleic_acid 304 _refine_hist.pdbx_number_atoms_ligand 21 _refine_hist.number_atoms_solvent 108 _refine_hist.number_atoms_total 2474 _refine_hist.d_res_high 2.30 _refine_hist.d_res_low 30.000 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function c_bond_d ? 0.006 ? ? 'X-RAY DIFFRACTION' ? c_angle_d ? 1.246 ? ? 'X-RAY DIFFRACTION' ? c_mcbond_it ? 1.692 1.500 ? 'X-RAY DIFFRACTION' ? c_scbond_it ? 2.068 2.000 ? 'X-RAY DIFFRACTION' ? c_mcangle_it ? 2.879 2.000 ? 'X-RAY DIFFRACTION' ? c_scangle_it ? 3.135 2.500 ? 'X-RAY DIFFRACTION' ? # loop_ _pdbx_xplor_file.serial_no _pdbx_xplor_file.param_file _pdbx_xplor_file.topol_file _pdbx_xplor_file.pdbx_refine_id 1 CNS_TOPPAR:protein_rep.param CNS_TOPPAR:protein.top 'X-RAY DIFFRACTION' 2 CNS_TOPPAR:dna-rna_rep.param CNS_TOPPAR:dna-rna.top 'X-RAY DIFFRACTION' 3 CNS_TOPPAR:water_rep.param CNS_TOPPAR:water.top 'X-RAY DIFFRACTION' 4 CNS_TOPPAR:ion.param CNS_TOPPAR:ion.top 'X-RAY DIFFRACTION' 5 btd.par btd.top 'X-RAY DIFFRACTION' # _struct.entry_id 2R2U _struct.title 'Co(III)bleomycinB2 bithiazole/C-terminal tail domain bound to d(ATTTAGTTAACTAAAT) complexed with MMLV RT catalytic fragment' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2R2U _struct_keywords.text ;bleomycin, drug-DNA complex, protein-DNA complex, MMLV RT, Aspartyl protease, DNA integration, DNA recombination, Endonuclease, Hydrolase, Multifunctional enzyme, Nuclease, Nucleotidyltransferase, Protease, RNA-directed DNA polymerase, Transferase, transferase-DNA COMPLEX ; _struct_keywords.pdbx_keywords transferase/DNA # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? F N N 5 ? G N N 5 ? # _struct_biol.id 1 _struct_biol.details ;The biological assembly is equivalent to 15 base pairs of DNA intercalated by two molecules of BLM with one molecule of MMLV RT bound on each end of the DNA. Symmetry is generated from the asymmetric unit by the operations: x, y, z and 2-x, 1-y, z. ; # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 THR C 1 ? PHE C 6 ? THR A 24 PHE A 29 1 ? 6 HELX_P HELX_P2 2 TRP C 10 ? GLY C 15 ? TRP A 33 GLY A 38 1 ? 6 HELX_P HELX_P3 3 SER C 44 ? GLN C 61 ? SER A 67 GLN A 84 1 ? 18 HELX_P HELX_P4 4 LEU C 92 ? VAL C 99 ? LEU A 115 VAL A 122 1 ? 8 HELX_P HELX_P5 5 ASN C 108 ? SER C 114 ? ASN A 131 SER A 137 1 ? 7 HELX_P HELX_P6 6 ASP C 130 ? LEU C 135 ? ASP A 153 LEU A 158 1 ? 6 HELX_P HELX_P7 7 SER C 141 ? ALA C 146 ? SER A 164 ALA A 169 5 ? 6 HELX_P HELX_P8 8 ASN C 171 ? LEU C 184 ? ASN A 194 LEU A 207 1 ? 14 HELX_P HELX_P9 9 LEU C 184 ? HIS C 191 ? LEU A 207 HIS A 214 1 ? 8 HELX_P HELX_P10 10 SER C 209 ? GLY C 228 ? SER A 232 GLY A 251 1 ? 20 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role hydrog1 hydrog ? ? A DA 1 N1 ? ? ? 1_555 B DT 8 N3 ? ? B DA 1 G DT 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A DA 1 N6 ? ? ? 1_555 B DT 8 O4 ? ? B DA 1 G DT 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A DT 2 N3 ? ? ? 1_555 B DA 7 N1 ? ? B DT 2 G DA 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A DT 2 O4 ? ? ? 1_555 B DA 7 N6 ? ? B DT 2 G DA 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A DT 3 N3 ? ? ? 1_555 B DA 6 N1 ? ? B DT 3 G DA 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A DT 3 O4 ? ? ? 1_555 B DA 6 N6 ? ? B DT 3 G DA 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A DT 4 N3 ? ? ? 1_555 B DA 5 N1 ? ? B DT 4 G DA 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A DT 4 O4 ? ? ? 1_555 B DA 5 N6 ? ? B DT 4 G DA 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A DA 5 N1 ? ? ? 1_555 B DT 4 N3 ? ? B DA 5 G DT 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A DA 5 N6 ? ? ? 1_555 B DT 4 O4 ? ? B DA 5 G DT 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A DT 7 N3 ? ? ? 1_555 B DA 2 N1 ? ? B DT 7 G DA 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A DT 7 O4 ? ? ? 1_555 B DA 2 N6 ? ? B DT 7 G DA 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # _struct_conn_type.id hydrog _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 3 ? B ? 2 ? C ? 4 ? D ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel B 1 2 ? anti-parallel C 1 2 ? anti-parallel C 2 3 ? anti-parallel C 3 4 ? anti-parallel D 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 LEU C 64 ? PRO C 66 ? LEU A 87 PRO A 89 A 2 GLN C 159 ? TRP C 162 ? GLN A 182 TRP A 185 A 3 PHE C 147 ? GLU C 148 ? PHE A 170 GLU A 171 B 1 LEU C 75 ? VAL C 78 ? LEU A 98 VAL A 101 B 2 ARG C 87 ? GLN C 90 ? ARG A 110 GLN A 113 C 1 ILE C 195 ? TYR C 199 ? ILE A 218 TYR A 222 C 2 ASP C 202 ? ALA C 206 ? ASP A 225 ALA A 229 C 3 TYR C 123 ? ASP C 127 ? TYR A 146 ASP A 150 C 4 GLN C 237 ? GLN C 240 ? GLN A 260 GLN A 263 D 1 GLN C 242 ? TYR C 245 ? GLN A 265 TYR A 268 D 2 TYR C 248 ? LYS C 251 ? TYR A 271 LYS A 274 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N VAL C 65 ? N VAL A 88 O THR C 161 ? O THR A 184 A 2 3 O LEU C 160 ? O LEU A 183 N PHE C 147 ? N PHE A 170 B 1 2 N VAL C 78 ? N VAL A 101 O ARG C 87 ? O ARG A 110 C 1 2 N ILE C 195 ? N ILE A 218 O ALA C 206 ? O ALA A 229 C 2 3 O LEU C 203 ? O LEU A 226 N LEU C 126 ? N LEU A 149 C 3 4 N TYR C 123 ? N TYR A 146 O GLN C 240 ? O GLN A 263 D 1 2 N VAL C 243 ? N VAL A 266 O LEU C 250 ? O LEU A 273 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software G BTZ 1 ? 3 'BINDING SITE FOR RESIDUE BTZ G 1' 1 ? ? ? ? ? ? ? # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 3 DT A 7 ? DT B 7 . ? 1_555 ? 2 AC1 3 DT B 1 ? DT G 9 . ? 1_555 ? 3 AC1 3 DA B 2 ? DA G 10 . ? 1_555 ? # _atom_sites.entry_id 2R2U _atom_sites.fract_transf_matrix[1][1] 0.017957 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.006840 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.021308 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 DA 1 1 1 DA A B . n A 1 2 DT 2 2 2 DT T B . n A 1 3 DT 3 3 3 DT T B . n A 1 4 DT 4 4 4 DT T B . n A 1 5 DA 5 5 5 DA A B . n A 1 6 DG 6 6 6 DG G B . n A 1 7 DT 7 7 7 DT T B . n B 2 1 DT 1 9 9 DT T G . n B 2 2 DA 2 10 10 DA A G . n B 2 3 DC 3 11 11 DC C G . n B 2 4 DT 4 12 12 DT T G . n B 2 5 DA 5 13 13 DA A G . n B 2 6 DA 6 14 14 DA A G . n B 2 7 DA 7 15 15 DA A G . n B 2 8 DT 8 16 16 DT T G . n C 3 1 THR 1 24 24 THR THR A . n C 3 2 TRP 2 25 25 TRP TRP A . n C 3 3 LEU 3 26 26 LEU LEU A . n C 3 4 SER 4 27 27 SER SER A . n C 3 5 ASP 5 28 28 ASP ASP A . n C 3 6 PHE 6 29 29 PHE PHE A . n C 3 7 PRO 7 30 30 PRO PRO A . n C 3 8 GLN 8 31 31 GLN GLN A . n C 3 9 ALA 9 32 32 ALA ALA A . n C 3 10 TRP 10 33 33 TRP TRP A . n C 3 11 ALA 11 34 34 ALA ALA A . n C 3 12 GLU 12 35 35 GLU GLU A . n C 3 13 THR 13 36 36 THR THR A . n C 3 14 GLY 14 37 37 GLY GLY A . n C 3 15 GLY 15 38 38 GLY GLY A . n C 3 16 MET 16 39 39 MET MET A . n C 3 17 GLY 17 40 40 GLY GLY A . n C 3 18 LEU 18 41 41 LEU LEU A . n C 3 19 ALA 19 42 42 ALA ALA A . n C 3 20 VAL 20 43 43 VAL VAL A . n C 3 21 ARG 21 44 44 ARG ARG A . n C 3 22 GLN 22 45 45 GLN GLN A . n C 3 23 ALA 23 46 46 ALA ALA A . n C 3 24 PRO 24 47 47 PRO PRO A . n C 3 25 LEU 25 48 48 LEU LEU A . n C 3 26 ILE 26 49 49 ILE ILE A . n C 3 27 ILE 27 50 50 ILE ILE A . n C 3 28 PRO 28 51 51 PRO PRO A . n C 3 29 LEU 29 52 52 LEU LEU A . n C 3 30 LYS 30 53 53 LYS LYS A . n C 3 31 ALA 31 54 54 ALA ALA A . n C 3 32 THR 32 55 55 THR THR A . n C 3 33 SER 33 56 56 SER SER A . n C 3 34 THR 34 57 57 THR THR A . n C 3 35 PRO 35 58 58 PRO PRO A . n C 3 36 VAL 36 59 59 VAL VAL A . n C 3 37 SER 37 60 60 SER SER A . n C 3 38 ILE 38 61 61 ILE ILE A . n C 3 39 LYS 39 62 62 LYS LYS A . n C 3 40 GLN 40 63 63 GLN GLN A . n C 3 41 TYR 41 64 64 TYR TYR A . n C 3 42 PRO 42 65 65 PRO PRO A . n C 3 43 MET 43 66 66 MET MET A . n C 3 44 SER 44 67 67 SER SER A . n C 3 45 GLN 45 68 68 GLN GLN A . n C 3 46 GLU 46 69 69 GLU GLU A . n C 3 47 ALA 47 70 70 ALA ALA A . n C 3 48 ARG 48 71 71 ARG ARG A . n C 3 49 LEU 49 72 72 LEU LEU A . n C 3 50 GLY 50 73 73 GLY GLY A . n C 3 51 ILE 51 74 74 ILE ILE A . n C 3 52 LYS 52 75 75 LYS LYS A . n C 3 53 PRO 53 76 76 PRO PRO A . n C 3 54 HIS 54 77 77 HIS HIS A . n C 3 55 ILE 55 78 78 ILE ILE A . n C 3 56 GLN 56 79 79 GLN GLN A . n C 3 57 ARG 57 80 80 ARG ARG A . n C 3 58 LEU 58 81 81 LEU LEU A . n C 3 59 LEU 59 82 82 LEU LEU A . n C 3 60 ASP 60 83 83 ASP ASP A . n C 3 61 GLN 61 84 84 GLN GLN A . n C 3 62 GLY 62 85 85 GLY GLY A . n C 3 63 ILE 63 86 86 ILE ILE A . n C 3 64 LEU 64 87 87 LEU LEU A . n C 3 65 VAL 65 88 88 VAL VAL A . n C 3 66 PRO 66 89 89 PRO PRO A . n C 3 67 CYS 67 90 90 CYS CYS A . n C 3 68 GLN 68 91 91 GLN GLN A . n C 3 69 SER 69 92 92 SER SER A . n C 3 70 PRO 70 93 93 PRO PRO A . n C 3 71 TRP 71 94 94 TRP TRP A . n C 3 72 ASN 72 95 95 ASN ASN A . n C 3 73 THR 73 96 96 THR THR A . n C 3 74 PRO 74 97 97 PRO PRO A . n C 3 75 LEU 75 98 98 LEU LEU A . n C 3 76 LEU 76 99 99 LEU LEU A . n C 3 77 PRO 77 100 100 PRO PRO A . n C 3 78 VAL 78 101 101 VAL VAL A . n C 3 79 LYS 79 102 102 LYS LYS A . n C 3 80 LYS 80 103 103 LYS LYS A . n C 3 81 PRO 81 104 104 PRO PRO A . n C 3 82 GLY 82 105 105 GLY GLY A . n C 3 83 THR 83 106 106 THR THR A . n C 3 84 ASN 84 107 107 ASN ASN A . n C 3 85 ASP 85 108 108 ASP ASP A . n C 3 86 TYR 86 109 109 TYR TYR A . n C 3 87 ARG 87 110 110 ARG ARG A . n C 3 88 PRO 88 111 111 PRO PRO A . n C 3 89 VAL 89 112 112 VAL VAL A . n C 3 90 GLN 90 113 113 GLN GLN A . n C 3 91 ASP 91 114 114 ASP ASP A . n C 3 92 LEU 92 115 115 LEU LEU A . n C 3 93 ARG 93 116 116 ARG ARG A . n C 3 94 GLU 94 117 117 GLU GLU A . n C 3 95 VAL 95 118 118 VAL VAL A . n C 3 96 ASN 96 119 119 ASN ASN A . n C 3 97 LYS 97 120 120 LYS LYS A . n C 3 98 ARG 98 121 121 ARG ARG A . n C 3 99 VAL 99 122 122 VAL VAL A . n C 3 100 GLU 100 123 123 GLU GLU A . n C 3 101 ASP 101 124 124 ASP ASP A . n C 3 102 ILE 102 125 125 ILE ILE A . n C 3 103 HIS 103 126 126 HIS HIS A . n C 3 104 PRO 104 127 127 PRO PRO A . n C 3 105 THR 105 128 128 THR THR A . n C 3 106 VAL 106 129 129 VAL VAL A . n C 3 107 PRO 107 130 130 PRO PRO A . n C 3 108 ASN 108 131 131 ASN ASN A . n C 3 109 PRO 109 132 132 PRO PRO A . n C 3 110 TYR 110 133 133 TYR TYR A . n C 3 111 ASN 111 134 134 ASN ASN A . n C 3 112 LEU 112 135 135 LEU LEU A . n C 3 113 LEU 113 136 136 LEU LEU A . n C 3 114 SER 114 137 137 SER SER A . n C 3 115 GLY 115 138 138 GLY GLY A . n C 3 116 LEU 116 139 139 LEU LEU A . n C 3 117 PRO 117 140 140 PRO PRO A . n C 3 118 PRO 118 141 141 PRO PRO A . n C 3 119 SER 119 142 142 SER SER A . n C 3 120 HIS 120 143 143 HIS HIS A . n C 3 121 GLN 121 144 144 GLN GLN A . n C 3 122 TRP 122 145 145 TRP TRP A . n C 3 123 TYR 123 146 146 TYR TYR A . n C 3 124 THR 124 147 147 THR THR A . n C 3 125 VAL 125 148 148 VAL VAL A . n C 3 126 LEU 126 149 149 LEU LEU A . n C 3 127 ASP 127 150 150 ASP ASP A . n C 3 128 LEU 128 151 151 LEU LEU A . n C 3 129 LYS 129 152 152 LYS LYS A . n C 3 130 ASP 130 153 153 ASP ASP A . n C 3 131 ALA 131 154 154 ALA ALA A . n C 3 132 PHE 132 155 155 PHE PHE A . n C 3 133 PHE 133 156 156 PHE PHE A . n C 3 134 CYS 134 157 157 CYS CYS A . n C 3 135 LEU 135 158 158 LEU LEU A . n C 3 136 ARG 136 159 159 ARG ARG A . n C 3 137 LEU 137 160 160 LEU LEU A . n C 3 138 HIS 138 161 161 HIS HIS A . n C 3 139 PRO 139 162 162 PRO PRO A . n C 3 140 THR 140 163 163 THR THR A . n C 3 141 SER 141 164 164 SER SER A . n C 3 142 GLN 142 165 165 GLN GLN A . n C 3 143 PRO 143 166 166 PRO PRO A . n C 3 144 LEU 144 167 167 LEU LEU A . n C 3 145 PHE 145 168 168 PHE PHE A . n C 3 146 ALA 146 169 169 ALA ALA A . n C 3 147 PHE 147 170 170 PHE PHE A . n C 3 148 GLU 148 171 171 GLU GLU A . n C 3 149 TRP 149 172 172 TRP TRP A . n C 3 150 ARG 150 173 173 ARG ARG A . n C 3 151 ASP 151 174 174 ASP ASP A . n C 3 152 PRO 152 175 175 PRO PRO A . n C 3 153 GLU 153 176 176 GLU GLU A . n C 3 154 MET 154 177 177 MET MET A . n C 3 155 GLY 155 178 178 GLY GLY A . n C 3 156 ILE 156 179 179 ILE ILE A . n C 3 157 SER 157 180 180 SER SER A . n C 3 158 GLY 158 181 181 GLY GLY A . n C 3 159 GLN 159 182 182 GLN GLN A . n C 3 160 LEU 160 183 183 LEU LEU A . n C 3 161 THR 161 184 184 THR THR A . n C 3 162 TRP 162 185 185 TRP TRP A . n C 3 163 THR 163 186 186 THR THR A . n C 3 164 ARG 164 187 187 ARG ARG A . n C 3 165 LEU 165 188 188 LEU LEU A . n C 3 166 PRO 166 189 189 PRO PRO A . n C 3 167 GLN 167 190 190 GLN GLN A . n C 3 168 GLY 168 191 191 GLY GLY A . n C 3 169 PHE 169 192 192 PHE PHE A . n C 3 170 LYS 170 193 193 LYS LYS A . n C 3 171 ASN 171 194 194 ASN ASN A . n C 3 172 SER 172 195 195 SER SER A . n C 3 173 PRO 173 196 196 PRO PRO A . n C 3 174 THR 174 197 197 THR THR A . n C 3 175 LEU 175 198 198 LEU LEU A . n C 3 176 PHE 176 199 199 PHE PHE A . n C 3 177 ASP 177 200 200 ASP ASP A . n C 3 178 GLU 178 201 201 GLU GLU A . n C 3 179 ALA 179 202 202 ALA ALA A . n C 3 180 LEU 180 203 203 LEU LEU A . n C 3 181 HIS 181 204 204 HIS HIS A . n C 3 182 ARG 182 205 205 ARG ARG A . n C 3 183 ASP 183 206 206 ASP ASP A . n C 3 184 LEU 184 207 207 LEU LEU A . n C 3 185 ALA 185 208 208 ALA ALA A . n C 3 186 ASP 186 209 209 ASP ASP A . n C 3 187 PHE 187 210 210 PHE PHE A . n C 3 188 ARG 188 211 211 ARG ARG A . n C 3 189 ILE 189 212 212 ILE ILE A . n C 3 190 GLN 190 213 213 GLN GLN A . n C 3 191 HIS 191 214 214 HIS HIS A . n C 3 192 PRO 192 215 215 PRO PRO A . n C 3 193 ASP 193 216 216 ASP ASP A . n C 3 194 LEU 194 217 217 LEU LEU A . n C 3 195 ILE 195 218 218 ILE ILE A . n C 3 196 LEU 196 219 219 LEU LEU A . n C 3 197 LEU 197 220 220 LEU LEU A . n C 3 198 GLN 198 221 221 GLN GLN A . n C 3 199 TYR 199 222 222 TYR TYR A . n C 3 200 VAL 200 223 223 VAL VAL A . n C 3 201 ASP 201 224 224 ASP ASP A . n C 3 202 ASP 202 225 225 ASP ASP A . n C 3 203 LEU 203 226 226 LEU LEU A . n C 3 204 LEU 204 227 227 LEU LEU A . n C 3 205 LEU 205 228 228 LEU LEU A . n C 3 206 ALA 206 229 229 ALA ALA A . n C 3 207 ALA 207 230 230 ALA ALA A . n C 3 208 THR 208 231 231 THR THR A . n C 3 209 SER 209 232 232 SER SER A . n C 3 210 GLU 210 233 233 GLU GLU A . n C 3 211 LEU 211 234 234 LEU LEU A . n C 3 212 ASP 212 235 235 ASP ASP A . n C 3 213 CYS 213 236 236 CYS CYS A . n C 3 214 GLN 214 237 237 GLN GLN A . n C 3 215 GLN 215 238 238 GLN GLN A . n C 3 216 GLY 216 239 239 GLY GLY A . n C 3 217 THR 217 240 240 THR THR A . n C 3 218 ARG 218 241 241 ARG ARG A . n C 3 219 ALA 219 242 242 ALA ALA A . n C 3 220 LEU 220 243 243 LEU LEU A . n C 3 221 LEU 221 244 244 LEU LEU A . n C 3 222 GLN 222 245 245 GLN GLN A . n C 3 223 THR 223 246 246 THR THR A . n C 3 224 LEU 224 247 247 LEU LEU A . n C 3 225 GLY 225 248 248 GLY GLY A . n C 3 226 ASN 226 249 249 ASN ASN A . n C 3 227 LEU 227 250 250 LEU LEU A . n C 3 228 GLY 228 251 251 GLY GLY A . n C 3 229 TYR 229 252 252 TYR TYR A . n C 3 230 ARG 230 253 253 ARG ARG A . n C 3 231 ALA 231 254 254 ALA ALA A . n C 3 232 SER 232 255 255 SER SER A . n C 3 233 ALA 233 256 256 ALA ALA A . n C 3 234 LYS 234 257 257 LYS LYS A . n C 3 235 LYS 235 258 258 LYS LYS A . n C 3 236 ALA 236 259 259 ALA ALA A . n C 3 237 GLN 237 260 260 GLN GLN A . n C 3 238 ILE 238 261 261 ILE ILE A . n C 3 239 CYS 239 262 262 CYS CYS A . n C 3 240 GLN 240 263 263 GLN GLN A . n C 3 241 LYS 241 264 264 LYS LYS A . n C 3 242 GLN 242 265 265 GLN GLN A . n C 3 243 VAL 243 266 266 VAL VAL A . n C 3 244 LYS 244 267 267 LYS LYS A . n C 3 245 TYR 245 268 268 TYR TYR A . n C 3 246 LEU 246 269 269 LEU LEU A . n C 3 247 GLY 247 270 270 GLY GLY A . n C 3 248 TYR 248 271 271 TYR TYR A . n C 3 249 LEU 249 272 272 LEU LEU A . n C 3 250 LEU 250 273 273 LEU LEU A . n C 3 251 LYS 251 274 274 LYS LYS A . n C 3 252 GLU 252 275 275 GLU GLU A . n C 3 253 GLY 253 276 276 GLY GLY A . n C 3 254 GLN 254 277 277 GLN GLN A . n C 3 255 ARG 255 278 278 ARG ARG A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 BTZ 1 1 1 BTZ BTZ G . E 5 HOH 1 40 40 HOH TIP B . F 5 HOH 1 62 62 HOH TIP G . F 5 HOH 2 97 97 HOH TIP G . G 5 HOH 1 279 1 HOH TIP A . G 5 HOH 2 280 2 HOH TIP A . G 5 HOH 3 281 3 HOH TIP A . G 5 HOH 4 282 4 HOH TIP A . G 5 HOH 5 283 5 HOH TIP A . G 5 HOH 6 284 6 HOH TIP A . G 5 HOH 7 285 7 HOH TIP A . G 5 HOH 8 286 8 HOH TIP A . G 5 HOH 9 287 9 HOH TIP A . G 5 HOH 10 288 10 HOH TIP A . G 5 HOH 11 289 11 HOH TIP A . G 5 HOH 12 290 12 HOH TIP A . G 5 HOH 13 291 13 HOH TIP A . G 5 HOH 14 292 14 HOH TIP A . G 5 HOH 15 293 15 HOH TIP A . G 5 HOH 16 294 16 HOH TIP A . G 5 HOH 17 295 17 HOH TIP A . G 5 HOH 18 296 18 HOH TIP A . G 5 HOH 19 297 19 HOH TIP A . G 5 HOH 20 298 20 HOH TIP A . G 5 HOH 21 299 21 HOH TIP A . G 5 HOH 22 300 22 HOH TIP A . G 5 HOH 23 301 23 HOH TIP A . G 5 HOH 24 302 24 HOH TIP A . G 5 HOH 25 303 25 HOH TIP A . G 5 HOH 26 304 26 HOH TIP A . G 5 HOH 27 305 27 HOH TIP A . G 5 HOH 28 306 28 HOH TIP A . G 5 HOH 29 307 29 HOH TIP A . G 5 HOH 30 308 30 HOH TIP A . G 5 HOH 31 309 31 HOH TIP A . G 5 HOH 32 310 32 HOH TIP A . G 5 HOH 33 311 33 HOH TIP A . G 5 HOH 34 312 34 HOH TIP A . G 5 HOH 35 313 35 HOH TIP A . G 5 HOH 36 314 36 HOH TIP A . G 5 HOH 37 315 37 HOH TIP A . G 5 HOH 38 316 38 HOH TIP A . G 5 HOH 39 317 39 HOH TIP A . G 5 HOH 40 318 41 HOH TIP A . G 5 HOH 41 319 42 HOH TIP A . G 5 HOH 42 320 43 HOH TIP A . G 5 HOH 43 321 44 HOH TIP A . G 5 HOH 44 322 45 HOH TIP A . G 5 HOH 45 323 46 HOH TIP A . G 5 HOH 46 324 47 HOH TIP A . G 5 HOH 47 325 48 HOH TIP A . G 5 HOH 48 326 49 HOH TIP A . G 5 HOH 49 327 50 HOH TIP A . G 5 HOH 50 328 51 HOH TIP A . G 5 HOH 51 329 52 HOH TIP A . G 5 HOH 52 330 53 HOH TIP A . G 5 HOH 53 331 54 HOH TIP A . G 5 HOH 54 332 55 HOH TIP A . G 5 HOH 55 333 56 HOH TIP A . G 5 HOH 56 334 57 HOH TIP A . G 5 HOH 57 335 58 HOH TIP A . G 5 HOH 58 336 59 HOH TIP A . G 5 HOH 59 337 60 HOH TIP A . G 5 HOH 60 338 61 HOH TIP A . G 5 HOH 61 339 63 HOH TIP A . G 5 HOH 62 340 64 HOH TIP A . G 5 HOH 63 341 65 HOH TIP A . G 5 HOH 64 342 66 HOH TIP A . G 5 HOH 65 343 67 HOH TIP A . G 5 HOH 66 344 68 HOH TIP A . G 5 HOH 67 345 69 HOH TIP A . G 5 HOH 68 346 70 HOH TIP A . G 5 HOH 69 347 71 HOH TIP A . G 5 HOH 70 348 72 HOH TIP A . G 5 HOH 71 349 73 HOH TIP A . G 5 HOH 72 350 74 HOH TIP A . G 5 HOH 73 351 75 HOH TIP A . G 5 HOH 74 352 76 HOH TIP A . G 5 HOH 75 353 77 HOH TIP A . G 5 HOH 76 354 78 HOH TIP A . G 5 HOH 77 355 79 HOH TIP A . G 5 HOH 78 356 80 HOH TIP A . G 5 HOH 79 357 81 HOH TIP A . G 5 HOH 80 358 82 HOH TIP A . G 5 HOH 81 359 83 HOH TIP A . G 5 HOH 82 360 84 HOH TIP A . G 5 HOH 83 361 85 HOH TIP A . G 5 HOH 84 362 86 HOH TIP A . G 5 HOH 85 363 87 HOH TIP A . G 5 HOH 86 364 88 HOH TIP A . G 5 HOH 87 365 89 HOH TIP A . G 5 HOH 88 366 90 HOH TIP A . G 5 HOH 89 367 91 HOH TIP A . G 5 HOH 90 368 92 HOH TIP A . G 5 HOH 91 369 93 HOH TIP A . G 5 HOH 92 370 94 HOH TIP A . G 5 HOH 93 371 95 HOH TIP A . G 5 HOH 94 372 96 HOH TIP A . G 5 HOH 95 373 98 HOH TIP A . G 5 HOH 96 374 99 HOH TIP A . G 5 HOH 97 375 100 HOH TIP A . G 5 HOH 98 376 101 HOH TIP A . G 5 HOH 99 377 102 HOH TIP A . G 5 HOH 100 378 103 HOH TIP A . G 5 HOH 101 379 104 HOH TIP A . G 5 HOH 102 380 105 HOH TIP A . G 5 HOH 103 381 106 HOH TIP A . G 5 HOH 104 382 107 HOH TIP A . G 5 HOH 105 383 108 HOH TIP A . # _struct_site_keywords.site_id 1 _struct_site_keywords.text 'INTERCALATION, MINOR GROOVE BINDER' # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details hexameric _pdbx_struct_assembly.oligomeric_count 6 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 2_765 -x+2,-y+1,z -1.0000000000 0.0000000000 0.0000000000 111.3780000000 0.0000000000 -1.0000000000 0.0000000000 146.1910000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2008-07-22 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2017-10-25 4 'Structure model' 1 3 2023-08-30 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Refinement description' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' 6 4 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' software 2 4 'Structure model' chem_comp_atom 3 4 'Structure model' chem_comp_bond 4 4 'Structure model' database_2 5 4 'Structure model' pdbx_initial_refinement_model 6 4 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_software.classification' 2 3 'Structure model' '_software.contact_author' 3 3 'Structure model' '_software.contact_author_email' 4 3 'Structure model' '_software.date' 5 3 'Structure model' '_software.language' 6 3 'Structure model' '_software.location' 7 3 'Structure model' '_software.name' 8 3 'Structure model' '_software.type' 9 3 'Structure model' '_software.version' 10 4 'Structure model' '_database_2.pdbx_DOI' 11 4 'Structure model' '_database_2.pdbx_database_accession' 12 4 'Structure model' '_struct_site.pdbx_auth_asym_id' 13 4 'Structure model' '_struct_site.pdbx_auth_comp_id' 14 4 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id _software.pdbx_ordinal DENZO . ? package 'Zbyszek Otwinowski' zbyszek@mix.swmed.edu 'data reduction' http://www.lnls.br/infra/linhasluz/denzo-hkl.htm ? ? 1 SCALEPACK . ? package 'Zbyszek Otwinowski' zbyszek@mix.swmed.edu 'data scaling' http://www.lnls.br/infra/linhasluz/denzo-hkl.htm ? ? 2 CNS . ? package 'Axel T. Brunger' axel.brunger@yale.edu refinement http://cns.csb.yale.edu/v1.1/ Fortran_77 ? 3 PDB_EXTRACT 3.000 'July 2, 2007' package PDB sw-help@rcsb.rutgers.edu 'data extraction' http://pdb.rutgers.edu/software/ C++ ? 4 HKL-2000 . ? ? ? ? 'data reduction' ? ? ? 5 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 THR A 36 ? ? -141.30 -30.36 2 1 LEU A 41 ? ? -167.37 107.94 3 1 ALA A 42 ? ? -68.29 90.22 4 1 LYS A 103 ? ? -78.78 -74.91 5 1 PRO A 104 ? ? -55.68 -176.54 6 1 ASN A 107 ? ? 40.07 174.61 7 1 MET A 177 ? ? 61.49 77.84 8 1 SER A 180 ? ? 1.33 -105.52 9 1 VAL A 223 ? ? 54.28 -104.46 10 1 ALA A 230 ? ? -108.45 -152.43 11 1 CYS A 262 ? ? 28.36 70.93 12 1 GLN A 277 ? ? -122.47 -51.58 # _pdbx_validate_planes.id 1 _pdbx_validate_planes.PDB_model_num 1 _pdbx_validate_planes.auth_comp_id DA _pdbx_validate_planes.auth_asym_id G _pdbx_validate_planes.auth_seq_id 15 _pdbx_validate_planes.PDB_ins_code ? _pdbx_validate_planes.label_alt_id ? _pdbx_validate_planes.rmsd 0.055 _pdbx_validate_planes.type 'SIDE CHAIN' # _pdbx_validate_polymer_linkage.id 1 _pdbx_validate_polymer_linkage.PDB_model_num 1 _pdbx_validate_polymer_linkage.auth_atom_id_1 "O3'" _pdbx_validate_polymer_linkage.auth_asym_id_1 G _pdbx_validate_polymer_linkage.auth_comp_id_1 DT _pdbx_validate_polymer_linkage.auth_seq_id_1 9 _pdbx_validate_polymer_linkage.PDB_ins_code_1 ? _pdbx_validate_polymer_linkage.label_alt_id_1 ? _pdbx_validate_polymer_linkage.auth_atom_id_2 P _pdbx_validate_polymer_linkage.auth_asym_id_2 G _pdbx_validate_polymer_linkage.auth_comp_id_2 DA _pdbx_validate_polymer_linkage.auth_seq_id_2 10 _pdbx_validate_polymer_linkage.PDB_ins_code_2 ? _pdbx_validate_polymer_linkage.label_alt_id_2 ? _pdbx_validate_polymer_linkage.dist 2.77 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 BTZ C44 C Y N 74 BTZ C49 C N N 75 BTZ O49 O N N 76 BTZ NP N N N 77 BTZ C50 C N N 78 BTZ C51 C N N 79 BTZ C52 C N N 80 BTZ C53 C N N 81 BTZ C54 C N N 82 BTZ NR N N N 83 BTZ NS N N N 84 BTZ NT N N N 85 BTZ C48 C Y N 86 BTZ C47 C Y N 87 BTZ S46 S Y N 88 BTZ C46 C Y N 89 BTZ NO N Y N 90 BTZ S43 S Y N 91 BTZ C43 C Y N 92 BTZ NN N Y N 93 BTZ C45 C Y N 94 BTZ H44 H N N 95 BTZ HNP H N N 96 BTZ H501 H N N 97 BTZ H502 H N N 98 BTZ H511 H N N 99 BTZ H512 H N N 100 BTZ H521 H N N 101 BTZ H522 H N N 102 BTZ H531 H N N 103 BTZ H532 H N N 104 BTZ HNR H N N 105 BTZ HNS1 H N N 106 BTZ HNS2 H N N 107 BTZ HNT H N N 108 BTZ H47 H N N 109 BTZ H43 H N N 110 CYS N N N N 111 CYS CA C N R 112 CYS C C N N 113 CYS O O N N 114 CYS CB C N N 115 CYS SG S N N 116 CYS OXT O N N 117 CYS H H N N 118 CYS H2 H N N 119 CYS HA H N N 120 CYS HB2 H N N 121 CYS HB3 H N N 122 CYS HG H N N 123 CYS HXT H N N 124 DA OP3 O N N 125 DA P P N N 126 DA OP1 O N N 127 DA OP2 O N N 128 DA "O5'" O N N 129 DA "C5'" C N N 130 DA "C4'" C N R 131 DA "O4'" O N N 132 DA "C3'" C N S 133 DA "O3'" O N N 134 DA "C2'" C N N 135 DA "C1'" C N R 136 DA N9 N Y N 137 DA C8 C Y N 138 DA N7 N Y N 139 DA C5 C Y N 140 DA C6 C Y N 141 DA N6 N N N 142 DA N1 N Y N 143 DA C2 C Y N 144 DA N3 N Y N 145 DA C4 C Y N 146 DA HOP3 H N N 147 DA HOP2 H N N 148 DA "H5'" H N N 149 DA "H5''" H N N 150 DA "H4'" H N N 151 DA "H3'" H N N 152 DA "HO3'" H N N 153 DA "H2'" H N N 154 DA "H2''" H N N 155 DA "H1'" H N N 156 DA H8 H N N 157 DA H61 H N N 158 DA H62 H N N 159 DA H2 H N N 160 DC OP3 O N N 161 DC P P N N 162 DC OP1 O N N 163 DC OP2 O N N 164 DC "O5'" O N N 165 DC "C5'" C N N 166 DC "C4'" C N R 167 DC "O4'" O N N 168 DC "C3'" C N S 169 DC "O3'" O N N 170 DC "C2'" C N N 171 DC "C1'" C N R 172 DC N1 N N N 173 DC C2 C N N 174 DC O2 O N N 175 DC N3 N N N 176 DC C4 C N N 177 DC N4 N N N 178 DC C5 C N N 179 DC C6 C N N 180 DC HOP3 H N N 181 DC HOP2 H N N 182 DC "H5'" H N N 183 DC "H5''" H N N 184 DC "H4'" H N N 185 DC "H3'" H N N 186 DC "HO3'" H N N 187 DC "H2'" H N N 188 DC "H2''" H N N 189 DC "H1'" H N N 190 DC H41 H N N 191 DC H42 H N N 192 DC H5 H N N 193 DC H6 H N N 194 DG OP3 O N N 195 DG P P N N 196 DG OP1 O N N 197 DG OP2 O N N 198 DG "O5'" O N N 199 DG "C5'" C N N 200 DG "C4'" C N R 201 DG "O4'" O N N 202 DG "C3'" C N S 203 DG "O3'" O N N 204 DG "C2'" C N N 205 DG "C1'" C N R 206 DG N9 N Y N 207 DG C8 C Y N 208 DG N7 N Y N 209 DG C5 C Y N 210 DG C6 C N N 211 DG O6 O N N 212 DG N1 N N N 213 DG C2 C N N 214 DG N2 N N N 215 DG N3 N N N 216 DG C4 C Y N 217 DG HOP3 H N N 218 DG HOP2 H N N 219 DG "H5'" H N N 220 DG "H5''" H N N 221 DG "H4'" H N N 222 DG "H3'" H N N 223 DG "HO3'" H N N 224 DG "H2'" H N N 225 DG "H2''" H N N 226 DG "H1'" H N N 227 DG H8 H N N 228 DG H1 H N N 229 DG H21 H N N 230 DG H22 H N N 231 DT OP3 O N N 232 DT P P N N 233 DT OP1 O N N 234 DT OP2 O N N 235 DT "O5'" O N N 236 DT "C5'" C N N 237 DT "C4'" C N R 238 DT "O4'" O N N 239 DT "C3'" C N S 240 DT "O3'" O N N 241 DT "C2'" C N N 242 DT "C1'" C N R 243 DT N1 N N N 244 DT C2 C N N 245 DT O2 O N N 246 DT N3 N N N 247 DT C4 C N N 248 DT O4 O N N 249 DT C5 C N N 250 DT C7 C N N 251 DT C6 C N N 252 DT HOP3 H N N 253 DT HOP2 H N N 254 DT "H5'" H N N 255 DT "H5''" H N N 256 DT "H4'" H N N 257 DT "H3'" H N N 258 DT "HO3'" H N N 259 DT "H2'" H N N 260 DT "H2''" H N N 261 DT "H1'" H N N 262 DT H3 H N N 263 DT H71 H N N 264 DT H72 H N N 265 DT H73 H N N 266 DT H6 H N N 267 GLN N N N N 268 GLN CA C N S 269 GLN C C N N 270 GLN O O N N 271 GLN CB C N N 272 GLN CG C N N 273 GLN CD C N N 274 GLN OE1 O N N 275 GLN NE2 N N N 276 GLN OXT O N N 277 GLN H H N N 278 GLN H2 H N N 279 GLN HA H N N 280 GLN HB2 H N N 281 GLN HB3 H N N 282 GLN HG2 H N N 283 GLN HG3 H N N 284 GLN HE21 H N N 285 GLN HE22 H N N 286 GLN HXT H N N 287 GLU N N N N 288 GLU CA C N S 289 GLU C C N N 290 GLU O O N N 291 GLU CB C N N 292 GLU CG C N N 293 GLU CD C N N 294 GLU OE1 O N N 295 GLU OE2 O N N 296 GLU OXT O N N 297 GLU H H N N 298 GLU H2 H N N 299 GLU HA H N N 300 GLU HB2 H N N 301 GLU HB3 H N N 302 GLU HG2 H N N 303 GLU HG3 H N N 304 GLU HE2 H N N 305 GLU HXT H N N 306 GLY N N N N 307 GLY CA C N N 308 GLY C C N N 309 GLY O O N N 310 GLY OXT O N N 311 GLY H H N N 312 GLY H2 H N N 313 GLY HA2 H N N 314 GLY HA3 H N N 315 GLY HXT H N N 316 HIS N N N N 317 HIS CA C N S 318 HIS C C N N 319 HIS O O N N 320 HIS CB C N N 321 HIS CG C Y N 322 HIS ND1 N Y N 323 HIS CD2 C Y N 324 HIS CE1 C Y N 325 HIS NE2 N Y N 326 HIS OXT O N N 327 HIS H H N N 328 HIS H2 H N N 329 HIS HA H N N 330 HIS HB2 H N N 331 HIS HB3 H N N 332 HIS HD1 H N N 333 HIS HD2 H N N 334 HIS HE1 H N N 335 HIS HE2 H N N 336 HIS HXT H N N 337 HOH O O N N 338 HOH H1 H N N 339 HOH H2 H N N 340 ILE N N N N 341 ILE CA C N S 342 ILE C C N N 343 ILE O O N N 344 ILE CB C N S 345 ILE CG1 C N N 346 ILE CG2 C N N 347 ILE CD1 C N N 348 ILE OXT O N N 349 ILE H H N N 350 ILE H2 H N N 351 ILE HA H N N 352 ILE HB H N N 353 ILE HG12 H N N 354 ILE HG13 H N N 355 ILE HG21 H N N 356 ILE HG22 H N N 357 ILE HG23 H N N 358 ILE HD11 H N N 359 ILE HD12 H N N 360 ILE HD13 H N N 361 ILE HXT H N N 362 LEU N N N N 363 LEU CA C N S 364 LEU C C N N 365 LEU O O N N 366 LEU CB C N N 367 LEU CG C N N 368 LEU CD1 C N N 369 LEU CD2 C N N 370 LEU OXT O N N 371 LEU H H N N 372 LEU H2 H N N 373 LEU HA H N N 374 LEU HB2 H N N 375 LEU HB3 H N N 376 LEU HG H N N 377 LEU HD11 H N N 378 LEU HD12 H N N 379 LEU HD13 H N N 380 LEU HD21 H N N 381 LEU HD22 H N N 382 LEU HD23 H N N 383 LEU HXT H N N 384 LYS N N N N 385 LYS CA C N S 386 LYS C C N N 387 LYS O O N N 388 LYS CB C N N 389 LYS CG C N N 390 LYS CD C N N 391 LYS CE C N N 392 LYS NZ N N N 393 LYS OXT O N N 394 LYS H H N N 395 LYS H2 H N N 396 LYS HA H N N 397 LYS HB2 H N N 398 LYS HB3 H N N 399 LYS HG2 H N N 400 LYS HG3 H N N 401 LYS HD2 H N N 402 LYS HD3 H N N 403 LYS HE2 H N N 404 LYS HE3 H N N 405 LYS HZ1 H N N 406 LYS HZ2 H N N 407 LYS HZ3 H N N 408 LYS HXT H N N 409 MET N N N N 410 MET CA C N S 411 MET C C N N 412 MET O O N N 413 MET CB C N N 414 MET CG C N N 415 MET SD S N N 416 MET CE C N N 417 MET OXT O N N 418 MET H H N N 419 MET H2 H N N 420 MET HA H N N 421 MET HB2 H N N 422 MET HB3 H N N 423 MET HG2 H N N 424 MET HG3 H N N 425 MET HE1 H N N 426 MET HE2 H N N 427 MET HE3 H N N 428 MET HXT H N N 429 PHE N N N N 430 PHE CA C N S 431 PHE C C N N 432 PHE O O N N 433 PHE CB C N N 434 PHE CG C Y N 435 PHE CD1 C Y N 436 PHE CD2 C Y N 437 PHE CE1 C Y N 438 PHE CE2 C Y N 439 PHE CZ C Y N 440 PHE OXT O N N 441 PHE H H N N 442 PHE H2 H N N 443 PHE HA H N N 444 PHE HB2 H N N 445 PHE HB3 H N N 446 PHE HD1 H N N 447 PHE HD2 H N N 448 PHE HE1 H N N 449 PHE HE2 H N N 450 PHE HZ H N N 451 PHE HXT H N N 452 PRO N N N N 453 PRO CA C N S 454 PRO C C N N 455 PRO O O N N 456 PRO CB C N N 457 PRO CG C N N 458 PRO CD C N N 459 PRO OXT O N N 460 PRO H H N N 461 PRO HA H N N 462 PRO HB2 H N N 463 PRO HB3 H N N 464 PRO HG2 H N N 465 PRO HG3 H N N 466 PRO HD2 H N N 467 PRO HD3 H N N 468 PRO HXT H N N 469 SER N N N N 470 SER CA C N S 471 SER C C N N 472 SER O O N N 473 SER CB C N N 474 SER OG O N N 475 SER OXT O N N 476 SER H H N N 477 SER H2 H N N 478 SER HA H N N 479 SER HB2 H N N 480 SER HB3 H N N 481 SER HG H N N 482 SER HXT H N N 483 THR N N N N 484 THR CA C N S 485 THR C C N N 486 THR O O N N 487 THR CB C N R 488 THR OG1 O N N 489 THR CG2 C N N 490 THR OXT O N N 491 THR H H N N 492 THR H2 H N N 493 THR HA H N N 494 THR HB H N N 495 THR HG1 H N N 496 THR HG21 H N N 497 THR HG22 H N N 498 THR HG23 H N N 499 THR HXT H N N 500 TRP N N N N 501 TRP CA C N S 502 TRP C C N N 503 TRP O O N N 504 TRP CB C N N 505 TRP CG C Y N 506 TRP CD1 C Y N 507 TRP CD2 C Y N 508 TRP NE1 N Y N 509 TRP CE2 C Y N 510 TRP CE3 C Y N 511 TRP CZ2 C Y N 512 TRP CZ3 C Y N 513 TRP CH2 C Y N 514 TRP OXT O N N 515 TRP H H N N 516 TRP H2 H N N 517 TRP HA H N N 518 TRP HB2 H N N 519 TRP HB3 H N N 520 TRP HD1 H N N 521 TRP HE1 H N N 522 TRP HE3 H N N 523 TRP HZ2 H N N 524 TRP HZ3 H N N 525 TRP HH2 H N N 526 TRP HXT H N N 527 TYR N N N N 528 TYR CA C N S 529 TYR C C N N 530 TYR O O N N 531 TYR CB C N N 532 TYR CG C Y N 533 TYR CD1 C Y N 534 TYR CD2 C Y N 535 TYR CE1 C Y N 536 TYR CE2 C Y N 537 TYR CZ C Y N 538 TYR OH O N N 539 TYR OXT O N N 540 TYR H H N N 541 TYR H2 H N N 542 TYR HA H N N 543 TYR HB2 H N N 544 TYR HB3 H N N 545 TYR HD1 H N N 546 TYR HD2 H N N 547 TYR HE1 H N N 548 TYR HE2 H N N 549 TYR HH H N N 550 TYR HXT H N N 551 VAL N N N N 552 VAL CA C N S 553 VAL C C N N 554 VAL O O N N 555 VAL CB C N N 556 VAL CG1 C N N 557 VAL CG2 C N N 558 VAL OXT O N N 559 VAL H H N N 560 VAL H2 H N N 561 VAL HA H N N 562 VAL HB H N N 563 VAL HG11 H N N 564 VAL HG12 H N N 565 VAL HG13 H N N 566 VAL HG21 H N N 567 VAL HG22 H N N 568 VAL HG23 H N N 569 VAL HXT H N N 570 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 BTZ NS C54 sing N N 70 BTZ S46 C47 sing Y N 71 BTZ S46 C46 sing Y N 72 BTZ C47 C48 doub Y N 73 BTZ NN C45 sing Y N 74 BTZ NN C43 doub Y N 75 BTZ C54 NR sing N N 76 BTZ C54 NT doub N N 77 BTZ C46 C45 sing Y N 78 BTZ C46 NO doub Y N 79 BTZ NR C53 sing N N 80 BTZ C45 C44 doub Y N 81 BTZ C48 NO sing Y N 82 BTZ C48 C49 sing N N 83 BTZ C43 S43 sing Y N 84 BTZ NP C49 sing N N 85 BTZ NP C50 sing N N 86 BTZ C51 C50 sing N N 87 BTZ C51 C52 sing N N 88 BTZ C49 O49 doub N N 89 BTZ C44 S43 sing Y N 90 BTZ C53 C52 sing N N 91 BTZ C44 H44 sing N N 92 BTZ NP HNP sing N N 93 BTZ C50 H501 sing N N 94 BTZ C50 H502 sing N N 95 BTZ C51 H511 sing N N 96 BTZ C51 H512 sing N N 97 BTZ C52 H521 sing N N 98 BTZ C52 H522 sing N N 99 BTZ C53 H531 sing N N 100 BTZ C53 H532 sing N N 101 BTZ NR HNR sing N N 102 BTZ NS HNS1 sing N N 103 BTZ NS HNS2 sing N N 104 BTZ NT HNT sing N N 105 BTZ C47 H47 sing N N 106 BTZ C43 H43 sing N N 107 CYS N CA sing N N 108 CYS N H sing N N 109 CYS N H2 sing N N 110 CYS CA C sing N N 111 CYS CA CB sing N N 112 CYS CA HA sing N N 113 CYS C O doub N N 114 CYS C OXT sing N N 115 CYS CB SG sing N N 116 CYS CB HB2 sing N N 117 CYS CB HB3 sing N N 118 CYS SG HG sing N N 119 CYS OXT HXT sing N N 120 DA OP3 P sing N N 121 DA OP3 HOP3 sing N N 122 DA P OP1 doub N N 123 DA P OP2 sing N N 124 DA P "O5'" sing N N 125 DA OP2 HOP2 sing N N 126 DA "O5'" "C5'" sing N N 127 DA "C5'" "C4'" sing N N 128 DA "C5'" "H5'" sing N N 129 DA "C5'" "H5''" sing N N 130 DA "C4'" "O4'" sing N N 131 DA "C4'" "C3'" sing N N 132 DA "C4'" "H4'" sing N N 133 DA "O4'" "C1'" sing N N 134 DA "C3'" "O3'" sing N N 135 DA "C3'" "C2'" sing N N 136 DA "C3'" "H3'" sing N N 137 DA "O3'" "HO3'" sing N N 138 DA "C2'" "C1'" sing N N 139 DA "C2'" "H2'" sing N N 140 DA "C2'" "H2''" sing N N 141 DA "C1'" N9 sing N N 142 DA "C1'" "H1'" sing N N 143 DA N9 C8 sing Y N 144 DA N9 C4 sing Y N 145 DA C8 N7 doub Y N 146 DA C8 H8 sing N N 147 DA N7 C5 sing Y N 148 DA C5 C6 sing Y N 149 DA C5 C4 doub Y N 150 DA C6 N6 sing N N 151 DA C6 N1 doub Y N 152 DA N6 H61 sing N N 153 DA N6 H62 sing N N 154 DA N1 C2 sing Y N 155 DA C2 N3 doub Y N 156 DA C2 H2 sing N N 157 DA N3 C4 sing Y N 158 DC OP3 P sing N N 159 DC OP3 HOP3 sing N N 160 DC P OP1 doub N N 161 DC P OP2 sing N N 162 DC P "O5'" sing N N 163 DC OP2 HOP2 sing N N 164 DC "O5'" "C5'" sing N N 165 DC "C5'" "C4'" sing N N 166 DC "C5'" "H5'" sing N N 167 DC "C5'" "H5''" sing N N 168 DC "C4'" "O4'" sing N N 169 DC "C4'" "C3'" sing N N 170 DC "C4'" "H4'" sing N N 171 DC "O4'" "C1'" sing N N 172 DC "C3'" "O3'" sing N N 173 DC "C3'" "C2'" sing N N 174 DC "C3'" "H3'" sing N N 175 DC "O3'" "HO3'" sing N N 176 DC "C2'" "C1'" sing N N 177 DC "C2'" "H2'" sing N N 178 DC "C2'" "H2''" sing N N 179 DC "C1'" N1 sing N N 180 DC "C1'" "H1'" sing N N 181 DC N1 C2 sing N N 182 DC N1 C6 sing N N 183 DC C2 O2 doub N N 184 DC C2 N3 sing N N 185 DC N3 C4 doub N N 186 DC C4 N4 sing N N 187 DC C4 C5 sing N N 188 DC N4 H41 sing N N 189 DC N4 H42 sing N N 190 DC C5 C6 doub N N 191 DC C5 H5 sing N N 192 DC C6 H6 sing N N 193 DG OP3 P sing N N 194 DG OP3 HOP3 sing N N 195 DG P OP1 doub N N 196 DG P OP2 sing N N 197 DG P "O5'" sing N N 198 DG OP2 HOP2 sing N N 199 DG "O5'" "C5'" sing N N 200 DG "C5'" "C4'" sing N N 201 DG "C5'" "H5'" sing N N 202 DG "C5'" "H5''" sing N N 203 DG "C4'" "O4'" sing N N 204 DG "C4'" "C3'" sing N N 205 DG "C4'" "H4'" sing N N 206 DG "O4'" "C1'" sing N N 207 DG "C3'" "O3'" sing N N 208 DG "C3'" "C2'" sing N N 209 DG "C3'" "H3'" sing N N 210 DG "O3'" "HO3'" sing N N 211 DG "C2'" "C1'" sing N N 212 DG "C2'" "H2'" sing N N 213 DG "C2'" "H2''" sing N N 214 DG "C1'" N9 sing N N 215 DG "C1'" "H1'" sing N N 216 DG N9 C8 sing Y N 217 DG N9 C4 sing Y N 218 DG C8 N7 doub Y N 219 DG C8 H8 sing N N 220 DG N7 C5 sing Y N 221 DG C5 C6 sing N N 222 DG C5 C4 doub Y N 223 DG C6 O6 doub N N 224 DG C6 N1 sing N N 225 DG N1 C2 sing N N 226 DG N1 H1 sing N N 227 DG C2 N2 sing N N 228 DG C2 N3 doub N N 229 DG N2 H21 sing N N 230 DG N2 H22 sing N N 231 DG N3 C4 sing N N 232 DT OP3 P sing N N 233 DT OP3 HOP3 sing N N 234 DT P OP1 doub N N 235 DT P OP2 sing N N 236 DT P "O5'" sing N N 237 DT OP2 HOP2 sing N N 238 DT "O5'" "C5'" sing N N 239 DT "C5'" "C4'" sing N N 240 DT "C5'" "H5'" sing N N 241 DT "C5'" "H5''" sing N N 242 DT "C4'" "O4'" sing N N 243 DT "C4'" "C3'" sing N N 244 DT "C4'" "H4'" sing N N 245 DT "O4'" "C1'" sing N N 246 DT "C3'" "O3'" sing N N 247 DT "C3'" "C2'" sing N N 248 DT "C3'" "H3'" sing N N 249 DT "O3'" "HO3'" sing N N 250 DT "C2'" "C1'" sing N N 251 DT "C2'" "H2'" sing N N 252 DT "C2'" "H2''" sing N N 253 DT "C1'" N1 sing N N 254 DT "C1'" "H1'" sing N N 255 DT N1 C2 sing N N 256 DT N1 C6 sing N N 257 DT C2 O2 doub N N 258 DT C2 N3 sing N N 259 DT N3 C4 sing N N 260 DT N3 H3 sing N N 261 DT C4 O4 doub N N 262 DT C4 C5 sing N N 263 DT C5 C7 sing N N 264 DT C5 C6 doub N N 265 DT C7 H71 sing N N 266 DT C7 H72 sing N N 267 DT C7 H73 sing N N 268 DT C6 H6 sing N N 269 GLN N CA sing N N 270 GLN N H sing N N 271 GLN N H2 sing N N 272 GLN CA C sing N N 273 GLN CA CB sing N N 274 GLN CA HA sing N N 275 GLN C O doub N N 276 GLN C OXT sing N N 277 GLN CB CG sing N N 278 GLN CB HB2 sing N N 279 GLN CB HB3 sing N N 280 GLN CG CD sing N N 281 GLN CG HG2 sing N N 282 GLN CG HG3 sing N N 283 GLN CD OE1 doub N N 284 GLN CD NE2 sing N N 285 GLN NE2 HE21 sing N N 286 GLN NE2 HE22 sing N N 287 GLN OXT HXT sing N N 288 GLU N CA sing N N 289 GLU N H sing N N 290 GLU N H2 sing N N 291 GLU CA C sing N N 292 GLU CA CB sing N N 293 GLU CA HA sing N N 294 GLU C O doub N N 295 GLU C OXT sing N N 296 GLU CB CG sing N N 297 GLU CB HB2 sing N N 298 GLU CB HB3 sing N N 299 GLU CG CD sing N N 300 GLU CG HG2 sing N N 301 GLU CG HG3 sing N N 302 GLU CD OE1 doub N N 303 GLU CD OE2 sing N N 304 GLU OE2 HE2 sing N N 305 GLU OXT HXT sing N N 306 GLY N CA sing N N 307 GLY N H sing N N 308 GLY N H2 sing N N 309 GLY CA C sing N N 310 GLY CA HA2 sing N N 311 GLY CA HA3 sing N N 312 GLY C O doub N N 313 GLY C OXT sing N N 314 GLY OXT HXT sing N N 315 HIS N CA sing N N 316 HIS N H sing N N 317 HIS N H2 sing N N 318 HIS CA C sing N N 319 HIS CA CB sing N N 320 HIS CA HA sing N N 321 HIS C O doub N N 322 HIS C OXT sing N N 323 HIS CB CG sing N N 324 HIS CB HB2 sing N N 325 HIS CB HB3 sing N N 326 HIS CG ND1 sing Y N 327 HIS CG CD2 doub Y N 328 HIS ND1 CE1 doub Y N 329 HIS ND1 HD1 sing N N 330 HIS CD2 NE2 sing Y N 331 HIS CD2 HD2 sing N N 332 HIS CE1 NE2 sing Y N 333 HIS CE1 HE1 sing N N 334 HIS NE2 HE2 sing N N 335 HIS OXT HXT sing N N 336 HOH O H1 sing N N 337 HOH O H2 sing N N 338 ILE N CA sing N N 339 ILE N H sing N N 340 ILE N H2 sing N N 341 ILE CA C sing N N 342 ILE CA CB sing N N 343 ILE CA HA sing N N 344 ILE C O doub N N 345 ILE C OXT sing N N 346 ILE CB CG1 sing N N 347 ILE CB CG2 sing N N 348 ILE CB HB sing N N 349 ILE CG1 CD1 sing N N 350 ILE CG1 HG12 sing N N 351 ILE CG1 HG13 sing N N 352 ILE CG2 HG21 sing N N 353 ILE CG2 HG22 sing N N 354 ILE CG2 HG23 sing N N 355 ILE CD1 HD11 sing N N 356 ILE CD1 HD12 sing N N 357 ILE CD1 HD13 sing N N 358 ILE OXT HXT sing N N 359 LEU N CA sing N N 360 LEU N H sing N N 361 LEU N H2 sing N N 362 LEU CA C sing N N 363 LEU CA CB sing N N 364 LEU CA HA sing N N 365 LEU C O doub N N 366 LEU C OXT sing N N 367 LEU CB CG sing N N 368 LEU CB HB2 sing N N 369 LEU CB HB3 sing N N 370 LEU CG CD1 sing N N 371 LEU CG CD2 sing N N 372 LEU CG HG sing N N 373 LEU CD1 HD11 sing N N 374 LEU CD1 HD12 sing N N 375 LEU CD1 HD13 sing N N 376 LEU CD2 HD21 sing N N 377 LEU CD2 HD22 sing N N 378 LEU CD2 HD23 sing N N 379 LEU OXT HXT sing N N 380 LYS N CA sing N N 381 LYS N H sing N N 382 LYS N H2 sing N N 383 LYS CA C sing N N 384 LYS CA CB sing N N 385 LYS CA HA sing N N 386 LYS C O doub N N 387 LYS C OXT sing N N 388 LYS CB CG sing N N 389 LYS CB HB2 sing N N 390 LYS CB HB3 sing N N 391 LYS CG CD sing N N 392 LYS CG HG2 sing N N 393 LYS CG HG3 sing N N 394 LYS CD CE sing N N 395 LYS CD HD2 sing N N 396 LYS CD HD3 sing N N 397 LYS CE NZ sing N N 398 LYS CE HE2 sing N N 399 LYS CE HE3 sing N N 400 LYS NZ HZ1 sing N N 401 LYS NZ HZ2 sing N N 402 LYS NZ HZ3 sing N N 403 LYS OXT HXT sing N N 404 MET N CA sing N N 405 MET N H sing N N 406 MET N H2 sing N N 407 MET CA C sing N N 408 MET CA CB sing N N 409 MET CA HA sing N N 410 MET C O doub N N 411 MET C OXT sing N N 412 MET CB CG sing N N 413 MET CB HB2 sing N N 414 MET CB HB3 sing N N 415 MET CG SD sing N N 416 MET CG HG2 sing N N 417 MET CG HG3 sing N N 418 MET SD CE sing N N 419 MET CE HE1 sing N N 420 MET CE HE2 sing N N 421 MET CE HE3 sing N N 422 MET OXT HXT sing N N 423 PHE N CA sing N N 424 PHE N H sing N N 425 PHE N H2 sing N N 426 PHE CA C sing N N 427 PHE CA CB sing N N 428 PHE CA HA sing N N 429 PHE C O doub N N 430 PHE C OXT sing N N 431 PHE CB CG sing N N 432 PHE CB HB2 sing N N 433 PHE CB HB3 sing N N 434 PHE CG CD1 doub Y N 435 PHE CG CD2 sing Y N 436 PHE CD1 CE1 sing Y N 437 PHE CD1 HD1 sing N N 438 PHE CD2 CE2 doub Y N 439 PHE CD2 HD2 sing N N 440 PHE CE1 CZ doub Y N 441 PHE CE1 HE1 sing N N 442 PHE CE2 CZ sing Y N 443 PHE CE2 HE2 sing N N 444 PHE CZ HZ sing N N 445 PHE OXT HXT sing N N 446 PRO N CA sing N N 447 PRO N CD sing N N 448 PRO N H sing N N 449 PRO CA C sing N N 450 PRO CA CB sing N N 451 PRO CA HA sing N N 452 PRO C O doub N N 453 PRO C OXT sing N N 454 PRO CB CG sing N N 455 PRO CB HB2 sing N N 456 PRO CB HB3 sing N N 457 PRO CG CD sing N N 458 PRO CG HG2 sing N N 459 PRO CG HG3 sing N N 460 PRO CD HD2 sing N N 461 PRO CD HD3 sing N N 462 PRO OXT HXT sing N N 463 SER N CA sing N N 464 SER N H sing N N 465 SER N H2 sing N N 466 SER CA C sing N N 467 SER CA CB sing N N 468 SER CA HA sing N N 469 SER C O doub N N 470 SER C OXT sing N N 471 SER CB OG sing N N 472 SER CB HB2 sing N N 473 SER CB HB3 sing N N 474 SER OG HG sing N N 475 SER OXT HXT sing N N 476 THR N CA sing N N 477 THR N H sing N N 478 THR N H2 sing N N 479 THR CA C sing N N 480 THR CA CB sing N N 481 THR CA HA sing N N 482 THR C O doub N N 483 THR C OXT sing N N 484 THR CB OG1 sing N N 485 THR CB CG2 sing N N 486 THR CB HB sing N N 487 THR OG1 HG1 sing N N 488 THR CG2 HG21 sing N N 489 THR CG2 HG22 sing N N 490 THR CG2 HG23 sing N N 491 THR OXT HXT sing N N 492 TRP N CA sing N N 493 TRP N H sing N N 494 TRP N H2 sing N N 495 TRP CA C sing N N 496 TRP CA CB sing N N 497 TRP CA HA sing N N 498 TRP C O doub N N 499 TRP C OXT sing N N 500 TRP CB CG sing N N 501 TRP CB HB2 sing N N 502 TRP CB HB3 sing N N 503 TRP CG CD1 doub Y N 504 TRP CG CD2 sing Y N 505 TRP CD1 NE1 sing Y N 506 TRP CD1 HD1 sing N N 507 TRP CD2 CE2 doub Y N 508 TRP CD2 CE3 sing Y N 509 TRP NE1 CE2 sing Y N 510 TRP NE1 HE1 sing N N 511 TRP CE2 CZ2 sing Y N 512 TRP CE3 CZ3 doub Y N 513 TRP CE3 HE3 sing N N 514 TRP CZ2 CH2 doub Y N 515 TRP CZ2 HZ2 sing N N 516 TRP CZ3 CH2 sing Y N 517 TRP CZ3 HZ3 sing N N 518 TRP CH2 HH2 sing N N 519 TRP OXT HXT sing N N 520 TYR N CA sing N N 521 TYR N H sing N N 522 TYR N H2 sing N N 523 TYR CA C sing N N 524 TYR CA CB sing N N 525 TYR CA HA sing N N 526 TYR C O doub N N 527 TYR C OXT sing N N 528 TYR CB CG sing N N 529 TYR CB HB2 sing N N 530 TYR CB HB3 sing N N 531 TYR CG CD1 doub Y N 532 TYR CG CD2 sing Y N 533 TYR CD1 CE1 sing Y N 534 TYR CD1 HD1 sing N N 535 TYR CD2 CE2 doub Y N 536 TYR CD2 HD2 sing N N 537 TYR CE1 CZ doub Y N 538 TYR CE1 HE1 sing N N 539 TYR CE2 CZ sing Y N 540 TYR CE2 HE2 sing N N 541 TYR CZ OH sing N N 542 TYR OH HH sing N N 543 TYR OXT HXT sing N N 544 VAL N CA sing N N 545 VAL N H sing N N 546 VAL N H2 sing N N 547 VAL CA C sing N N 548 VAL CA CB sing N N 549 VAL CA HA sing N N 550 VAL C O doub N N 551 VAL C OXT sing N N 552 VAL CB CG1 sing N N 553 VAL CB CG2 sing N N 554 VAL CB HB sing N N 555 VAL CG1 HG11 sing N N 556 VAL CG1 HG12 sing N N 557 VAL CG1 HG13 sing N N 558 VAL CG2 HG21 sing N N 559 VAL CG2 HG22 sing N N 560 VAL CG2 HG23 sing N N 561 VAL OXT HXT sing N N 562 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 2R2U 'double helix' 2R2U 'b-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A DA 1 1_555 B DT 8 1_555 -0.085 -0.164 -0.273 -16.531 2.902 -2.142 1 B_DA1:DT16_G B 1 ? G 16 ? 20 1 1 A DT 2 1_555 B DA 7 1_555 0.200 -0.158 0.199 -5.766 -1.767 1.916 2 B_DT2:DA15_G B 2 ? G 15 ? 20 1 1 A DT 3 1_555 B DA 6 1_555 0.273 -0.369 0.220 -0.791 -10.870 5.525 3 B_DT3:DA14_G B 3 ? G 14 ? 20 1 1 A DT 4 1_555 B DA 5 1_555 0.146 -0.471 -0.067 -1.147 -5.133 3.511 4 B_DT4:DA13_G B 4 ? G 13 ? 20 1 1 A DA 5 1_555 B DT 4 1_555 0.997 -0.366 -0.342 -6.545 -15.771 1.836 5 B_DA5:DT12_G B 5 ? G 12 ? 20 1 1 A DT 7 1_555 B DA 2 1_555 1.580 -0.469 0.070 15.675 -13.379 5.952 6 B_DT7:DA10_G B 7 ? G 10 ? 20 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A DA 1 1_555 B DT 8 1_555 A DT 2 1_555 B DA 7 1_555 0.182 -0.442 3.168 -4.183 7.654 33.510 -1.866 -0.920 2.956 13.004 7.106 34.596 1 BB_DA1DT2:DA15DT16_GG B 1 ? G 16 ? B 2 ? G 15 ? 1 A DT 2 1_555 B DA 7 1_555 A DT 3 1_555 B DA 6 1_555 0.013 -0.237 3.058 0.604 3.070 34.051 -0.855 0.067 3.025 5.229 -1.028 34.191 2 BB_DT2DT3:DA14DA15_GG B 2 ? G 15 ? B 3 ? G 14 ? 1 A DT 3 1_555 B DA 6 1_555 A DT 4 1_555 B DA 5 1_555 -0.207 -0.064 3.248 2.569 1.433 32.928 -0.352 0.795 3.218 2.522 -4.521 33.056 3 BB_DT3DT4:DA13DA14_GG B 3 ? G 14 ? B 4 ? G 13 ? 1 A DT 4 1_555 B DA 5 1_555 A DA 5 1_555 B DT 4 1_555 -0.330 0.436 3.466 2.211 8.496 36.026 -0.537 0.837 3.451 13.491 -3.510 37.046 4 BB_DT4DA5:DT12DA13_GG B 4 ? G 13 ? B 5 ? G 12 ? 1 A DA 5 1_555 B DT 4 1_555 A DT 7 1_555 B DA 2 1_555 -0.194 -0.199 5.837 1.088 5.322 68.493 -0.528 0.243 5.806 4.721 -0.965 68.682 5 BB_DA5DT7:DA10DT12_GG B 5 ? G 12 ? B 7 ? G 10 ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 4 "N-(4-{[amino(imino)methyl]amino}butyl)-2,4'-bi-1,3-thiazole-4-carboxamide" BTZ 5 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1ZTW _pdbx_initial_refinement_model.details ? #