data_2R6V # _entry.id 2R6V # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.365 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2R6V pdb_00002r6v 10.2210/pdb2r6v/pdb RCSB RCSB044498 ? ? WWPDB D_1000044498 ? ? # _pdbx_database_related.db_name TargetDB _pdbx_database_related.db_id 375048 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.SG_entry Y _pdbx_database_status.entry_id 2R6V _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2007-09-06 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # _audit_author.name 'Joint Center for Structural Genomics (JCSG)' _audit_author.pdbx_ordinal 1 # _citation.id primary _citation.title 'Crystal structure of FMN-binding protein (NP_142786.1) from Pyrococcus horikoshii at 1.35 A resolution' _citation.journal_abbrev 'To be published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # _citation_author.citation_id primary _citation_author.name 'Joint Center for Structural Genomics (JCSG)' _citation_author.ordinal 1 _citation_author.identifier_ORCID ? # _cell.entry_id 2R6V _cell.length_a 46.200 _cell.length_b 46.200 _cell.length_c 267.590 _cell.angle_alpha 90.000 _cell.angle_beta 90.000 _cell.angle_gamma 120.000 _cell.pdbx_unique_axis ? _cell.Z_PDB 12 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 2R6V _symmetry.Int_Tables_number 178 _symmetry.space_group_name_H-M 'P 61 2 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Uncharacterized protein PH0856' 21925.521 1 ? ? ? ? 2 non-polymer syn 'FLAVIN MONONUCLEOTIDE' 456.344 1 ? ? ? ? 3 non-polymer syn NICOTINAMIDE 122.125 1 ? ? ? ? 4 non-polymer syn 1,2-ETHANEDIOL 62.068 1 ? ? ? ? 5 water nat water 18.015 208 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;(MSE)GSDKIHHHHHHENLYFQG(MSE)EGYRLLYP(MSE)RTYLIVSGHGEETNV(MSE)AADWVTVVSFDPFIVGVAV APKRTTHKLIKKYGEFVISVPSLDVLRDVWIAGTKKGPSKLKE(MSE)SVTLIPSKKVKVPSIEEALANIECRVIDARSY GDHTFFVGEVVGYTYKDYAFEKGKPNLKAKFLAHVSWSEFVTFSEKVHKAE ; _entity_poly.pdbx_seq_one_letter_code_can ;MGSDKIHHHHHHENLYFQGMEGYRLLYPMRTYLIVSGHGEETNVMAADWVTVVSFDPFIVGVAVAPKRTTHKLIKKYGEF VISVPSLDVLRDVWIAGTKKGPSKLKEMSVTLIPSKKVKVPSIEEALANIECRVIDARSYGDHTFFVGEVVGYTYKDYAF EKGKPNLKAKFLAHVSWSEFVTFSEKVHKAE ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier 375048 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MSE n 1 2 GLY n 1 3 SER n 1 4 ASP n 1 5 LYS n 1 6 ILE n 1 7 HIS n 1 8 HIS n 1 9 HIS n 1 10 HIS n 1 11 HIS n 1 12 HIS n 1 13 GLU n 1 14 ASN n 1 15 LEU n 1 16 TYR n 1 17 PHE n 1 18 GLN n 1 19 GLY n 1 20 MSE n 1 21 GLU n 1 22 GLY n 1 23 TYR n 1 24 ARG n 1 25 LEU n 1 26 LEU n 1 27 TYR n 1 28 PRO n 1 29 MSE n 1 30 ARG n 1 31 THR n 1 32 TYR n 1 33 LEU n 1 34 ILE n 1 35 VAL n 1 36 SER n 1 37 GLY n 1 38 HIS n 1 39 GLY n 1 40 GLU n 1 41 GLU n 1 42 THR n 1 43 ASN n 1 44 VAL n 1 45 MSE n 1 46 ALA n 1 47 ALA n 1 48 ASP n 1 49 TRP n 1 50 VAL n 1 51 THR n 1 52 VAL n 1 53 VAL n 1 54 SER n 1 55 PHE n 1 56 ASP n 1 57 PRO n 1 58 PHE n 1 59 ILE n 1 60 VAL n 1 61 GLY n 1 62 VAL n 1 63 ALA n 1 64 VAL n 1 65 ALA n 1 66 PRO n 1 67 LYS n 1 68 ARG n 1 69 THR n 1 70 THR n 1 71 HIS n 1 72 LYS n 1 73 LEU n 1 74 ILE n 1 75 LYS n 1 76 LYS n 1 77 TYR n 1 78 GLY n 1 79 GLU n 1 80 PHE n 1 81 VAL n 1 82 ILE n 1 83 SER n 1 84 VAL n 1 85 PRO n 1 86 SER n 1 87 LEU n 1 88 ASP n 1 89 VAL n 1 90 LEU n 1 91 ARG n 1 92 ASP n 1 93 VAL n 1 94 TRP n 1 95 ILE n 1 96 ALA n 1 97 GLY n 1 98 THR n 1 99 LYS n 1 100 LYS n 1 101 GLY n 1 102 PRO n 1 103 SER n 1 104 LYS n 1 105 LEU n 1 106 LYS n 1 107 GLU n 1 108 MSE n 1 109 SER n 1 110 VAL n 1 111 THR n 1 112 LEU n 1 113 ILE n 1 114 PRO n 1 115 SER n 1 116 LYS n 1 117 LYS n 1 118 VAL n 1 119 LYS n 1 120 VAL n 1 121 PRO n 1 122 SER n 1 123 ILE n 1 124 GLU n 1 125 GLU n 1 126 ALA n 1 127 LEU n 1 128 ALA n 1 129 ASN n 1 130 ILE n 1 131 GLU n 1 132 CYS n 1 133 ARG n 1 134 VAL n 1 135 ILE n 1 136 ASP n 1 137 ALA n 1 138 ARG n 1 139 SER n 1 140 TYR n 1 141 GLY n 1 142 ASP n 1 143 HIS n 1 144 THR n 1 145 PHE n 1 146 PHE n 1 147 VAL n 1 148 GLY n 1 149 GLU n 1 150 VAL n 1 151 VAL n 1 152 GLY n 1 153 TYR n 1 154 THR n 1 155 TYR n 1 156 LYS n 1 157 ASP n 1 158 TYR n 1 159 ALA n 1 160 PHE n 1 161 GLU n 1 162 LYS n 1 163 GLY n 1 164 LYS n 1 165 PRO n 1 166 ASN n 1 167 LEU n 1 168 LYS n 1 169 ALA n 1 170 LYS n 1 171 PHE n 1 172 LEU n 1 173 ALA n 1 174 HIS n 1 175 VAL n 1 176 SER n 1 177 TRP n 1 178 SER n 1 179 GLU n 1 180 PHE n 1 181 VAL n 1 182 THR n 1 183 PHE n 1 184 SER n 1 185 GLU n 1 186 LYS n 1 187 VAL n 1 188 HIS n 1 189 LYS n 1 190 ALA n 1 191 GLU n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus Pyrococcus _entity_src_gen.pdbx_gene_src_gene 'NP_142786.1, PH0856' _entity_src_gen.gene_src_species 'Pyrococcus horikoshii' _entity_src_gen.gene_src_strain OT3 _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Pyrococcus horikoshii' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 70601 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain HK100 _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type Plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name speedET _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Y856_PYRHO _struct_ref.pdbx_db_accession O58586 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MEGYRLLYPMRTYLIVSGHGEETNVMAADWVTVVSFDPFIVGVAVAPKRTTHKLIKKYGEFVISVPSLDVLRDVWIAGTK KGPSKLKEMSVTLIPSKKVKVPSIEEALANIECRVIDARSYGDHTFFVGEVVGYTYKDYAFEKGKPNLKAKFLAHVSWSE FVTFSEKVHKAE ; _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 2R6V _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 20 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 191 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession O58586 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 172 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 172 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 2R6V MSE A 1 ? UNP O58586 ? ? 'expression tag' -18 1 1 2R6V GLY A 2 ? UNP O58586 ? ? 'expression tag' -17 2 1 2R6V SER A 3 ? UNP O58586 ? ? 'expression tag' -16 3 1 2R6V ASP A 4 ? UNP O58586 ? ? 'expression tag' -15 4 1 2R6V LYS A 5 ? UNP O58586 ? ? 'expression tag' -14 5 1 2R6V ILE A 6 ? UNP O58586 ? ? 'expression tag' -13 6 1 2R6V HIS A 7 ? UNP O58586 ? ? 'expression tag' -12 7 1 2R6V HIS A 8 ? UNP O58586 ? ? 'expression tag' -11 8 1 2R6V HIS A 9 ? UNP O58586 ? ? 'expression tag' -10 9 1 2R6V HIS A 10 ? UNP O58586 ? ? 'expression tag' -9 10 1 2R6V HIS A 11 ? UNP O58586 ? ? 'expression tag' -8 11 1 2R6V HIS A 12 ? UNP O58586 ? ? 'expression tag' -7 12 1 2R6V GLU A 13 ? UNP O58586 ? ? 'expression tag' -6 13 1 2R6V ASN A 14 ? UNP O58586 ? ? 'expression tag' -5 14 1 2R6V LEU A 15 ? UNP O58586 ? ? 'expression tag' -4 15 1 2R6V TYR A 16 ? UNP O58586 ? ? 'expression tag' -3 16 1 2R6V PHE A 17 ? UNP O58586 ? ? 'expression tag' -2 17 1 2R6V GLN A 18 ? UNP O58586 ? ? 'expression tag' -1 18 1 2R6V GLY A 19 ? UNP O58586 ? ? 'expression tag' 0 19 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 EDO non-polymer . 1,2-ETHANEDIOL 'ETHYLENE GLYCOL' 'C2 H6 O2' 62.068 FMN non-polymer . 'FLAVIN MONONUCLEOTIDE' 'RIBOFLAVIN MONOPHOSPHATE' 'C17 H21 N4 O9 P' 456.344 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 NCA non-polymer . NICOTINAMIDE ? 'C6 H6 N2 O' 122.125 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.crystals_number 1 _exptl.method 'X-RAY DIFFRACTION' _exptl.entry_id 2R6V # _exptl_crystal.id 1 _exptl_crystal.density_Matthews 1.88 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 34.57 _exptl_crystal.description ;THE HIGH RESOLUTION DATA FROM THE PEAK WAVELENGTH IS INCOMPLETE. LOWER RESOLUTION DATA FROM THE INFLECTION AND HIGH ENERGY REMOTE WAVELENGTHS WERE MERGED WITH THE PEAK DATA TO INCREASE THE COMPLETENESS TO 1.4 A. THIS DATA WAS USED FOR REFINEMENT AND THE STATISTICS ABOVE ARE FROM THIS MERGED DATA SET. ; _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.pH 6.6 _exptl_crystal_grow.temp 277 _exptl_crystal_grow.pdbx_details 'NANODROP, 0.2M Ammonium formate, 20.0% PEG 3350, No Buffer pH 6.6, VAPOR DIFFUSION, SITTING DROP, temperature 277K' _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'MARMOSAIC 325 mm CCD' _diffrn_detector.details 'Flat mirror (vertical focusing)' _diffrn_detector.pdbx_collection_date 2007-07-20 # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Single crystal Si(111) bent (horizontal focusing)' _diffrn_radiation.pdbx_diffrn_protocol MAD _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_scattering_type x-ray # loop_ _diffrn_radiation_wavelength.id _diffrn_radiation_wavelength.wavelength _diffrn_radiation_wavelength.wt 1 0.91837 1.0 2 0.97939 1.0 3 0.97910 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.pdbx_synchrotron_beamline BL11-1 _diffrn_source.type 'SSRL BEAMLINE BL11-1' _diffrn_source.pdbx_wavelength_list '0.91837, 0.97939, 0.97910' _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_site SSRL # _reflns.entry_id 2R6V _reflns.d_resolution_high 1.25 _reflns.d_resolution_low 44.588 _reflns.number_obs 41184 _reflns.pdbx_Rmerge_I_obs 0.068 _reflns.pdbx_netI_over_sigmaI 23.93 _reflns.percent_possible_obs 84.500 _reflns.B_iso_Wilson_estimate 15.957 _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.number_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_redundancy 18.3 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.number_measured_obs _reflns_shell.number_unique_obs _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_obs _reflns_shell.pdbx_redundancy _reflns_shell.percent_possible_all _reflns_shell.percent_possible_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.number_unique_all _reflns_shell.number_measured_all _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id 1.25 1.29 3995 1197 0.318 3.2 3.3 28.2 ? ? ? ? ? 1 1 1.29 1.35 15904 3095 0.276 4.5 5.1 56.6 ? ? ? ? ? 2 1 1.35 1.41 17396 2999 0.238 5.4 5.8 65.3 ? ? ? ? ? 3 1 1.41 1.48 33694 4248 0.196 8.0 7.9 94.4 ? ? ? ? ? 4 1 1.48 1.57 57640 4661 0.159 12.5 12.4 99.9 ? ? ? ? ? 5 1 1.57 1.70 102653 5140 0.131 20.2 20.0 99.9 ? ? ? ? ? 6 1 1.70 1.87 121364 4758 0.104 29.8 25.5 99.9 ? ? ? ? ? 7 1 1.87 2.14 127609 4853 0.082 36.6 26.3 99.9 ? ? ? ? ? 8 1 2.14 2.69 130814 4921 0.072 41.0 26.6 100.0 ? ? ? ? ? 9 1 2.69 44.6 143198 5312 0.058 44.0 27.0 99.4 ? ? ? ? ? 10 1 # _refine.entry_id 2R6V _refine.ls_d_res_high 1.250 _refine.ls_d_res_low 44.588 _refine.pdbx_ls_sigma_F 0.00 _refine.ls_percent_reflns_obs 84.970 _refine.ls_number_reflns_obs 41182 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details RANDOM _refine.details ;1. HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS. 2. A MET-INHIBITION PROTOCOL WAS USED FOR SELENOMETHIONINE INCORPORATION DURING PROTEIN EXPRESSION. THE OCCUPANCY OF THE SE ATOMS IN THE MSE RESIDUES WAS REDUCED TO 0.80 FOR THE REDUCED SCATTERING POWER DUE TO PARTIAL S-MET INCORPORATION. 3. EDO IS FROM CRYO CONDITION. FMN IS ASSIGNED BASED ON DENSITY, STRUCTURAL HOMOLOGS AS WELL AS INTERACTION WITH PROTEIN. NCA (NICOTINAMIDE) IS TENTATIVELY ASSIGNED BASED ON DENSITY AND INTERACTION. NCA COULD BE A PORTION OF THE PUTATIVE LIGAND NADP+ (PDB 1I0S) OR OTHER RELATED COMPOUNDS. 4. DUE TO LOW COMPLETENESS OF THE HIGH RESOLUTION DATA FROM THE PEAK WAVELENGTH, REFINEMENT WAS AGAINST DATA MERGED FROM ALL THREE WAVELENGTHS. THIS MERGED DATA IS 85 % COMPLETE OVERALL. THE NOMINAL RESOLUTION IS 1.35A WITH 4292 OBSERVED REFLECTIONS BETWEEN 1.35-1.25A (44 % COMPLETE FOR THIS SHELL) INCLUDED IN THE REFINEMENT. ; _refine.ls_R_factor_all 0.128 _refine.ls_R_factor_R_work 0.127 _refine.ls_R_factor_R_free 0.154 _refine.ls_percent_reflns_R_free 5.100 _refine.ls_number_reflns_R_free 2082 _refine.B_iso_mean 12.524 _refine.aniso_B[1][1] 0.580 _refine.aniso_B[2][2] 0.580 _refine.aniso_B[3][3] -0.870 _refine.aniso_B[1][2] 0.290 _refine.aniso_B[1][3] 0.000 _refine.aniso_B[2][3] 0.000 _refine.correlation_coeff_Fo_to_Fc 0.978 _refine.correlation_coeff_Fo_to_Fc_free 0.971 _refine.pdbx_overall_ESU_R 0.050 _refine.pdbx_overall_ESU_R_Free 0.045 _refine.overall_SU_ML 0.024 _refine.overall_SU_B 1.236 _refine.solvent_model_details 'BABINET MODEL WITH MASK' _refine.pdbx_solvent_vdw_probe_radii 1.200 _refine.pdbx_solvent_ion_probe_radii 0.800 _refine.pdbx_solvent_shrinkage_radii 0.800 _refine.pdbx_method_to_determine_struct MAD _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD WITH PHASES' _refine.pdbx_ls_sigma_I ? _refine.ls_number_reflns_all ? _refine.ls_R_factor_obs 0.128 _refine.ls_redundancy_reflns_obs ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_starting_model ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.pdbx_isotropic_thermal_model ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_overall_phase_error ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1444 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 44 _refine_hist.number_atoms_solvent 208 _refine_hist.number_atoms_total 1696 _refine_hist.d_res_high 1.250 _refine_hist.d_res_low 44.588 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 1754 0.015 0.022 ? 'X-RAY DIFFRACTION' ? r_bond_other_d 1210 0.005 0.020 ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 2421 1.549 1.978 ? 'X-RAY DIFFRACTION' ? r_angle_other_deg 2969 1.083 3.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 234 6.341 5.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 74 34.349 23.243 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 306 12.533 15.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 9 20.425 15.000 ? 'X-RAY DIFFRACTION' ? r_chiral_restr 263 0.103 0.200 ? 'X-RAY DIFFRACTION' ? r_gen_planes_refined 1973 0.011 0.020 ? 'X-RAY DIFFRACTION' ? r_gen_planes_other 376 0.005 0.020 ? 'X-RAY DIFFRACTION' ? r_nbd_refined 296 0.211 0.200 ? 'X-RAY DIFFRACTION' ? r_nbd_other 1246 0.206 0.200 ? 'X-RAY DIFFRACTION' ? r_nbtor_refined 824 0.189 0.200 ? 'X-RAY DIFFRACTION' ? r_nbtor_other 904 0.091 0.200 ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 157 0.150 0.200 ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 21 0.339 0.200 ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other 75 0.276 0.200 ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 36 0.177 0.200 ? 'X-RAY DIFFRACTION' ? r_mcbond_it 1097 2.895 3.000 ? 'X-RAY DIFFRACTION' ? r_mcbond_other 408 2.077 3.000 ? 'X-RAY DIFFRACTION' ? r_mcangle_it 1698 3.552 5.000 ? 'X-RAY DIFFRACTION' ? r_scbond_it 846 4.516 8.000 ? 'X-RAY DIFFRACTION' ? r_scangle_it 700 5.458 11.000 ? 'X-RAY DIFFRACTION' ? r_rigid_bond_restr 3459 2.843 3.000 ? 'X-RAY DIFFRACTION' ? r_sphericity_free 212 10.388 3.000 ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded 2891 4.923 3.000 ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.d_res_high 1.250 _refine_ls_shell.d_res_low 1.283 _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.percent_reflns_obs 25.410 _refine_ls_shell.number_reflns_R_work 834 _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_R_work 0.220 _refine_ls_shell.R_factor_R_free 0.217 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 52 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.number_reflns_all ? _refine_ls_shell.number_reflns_obs 886 _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 2R6V _struct.title 'Crystal structure of FMN-binding protein (NP_142786.1) from Pyrococcus horikoshii at 1.35 A resolution' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.text ;NP_142786.1, FMN-binding protein, Flavin reductase like domain, Structural Genomics, Joint Center for Structural Genomics, JCSG, Protein Structure Initiative, PSI-2, Flavoprotein ; _struct_keywords.pdbx_keywords FLAVOPROTEIN _struct_keywords.entry_id 2R6V # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 GLU A 21 ? TYR A 27 ? GLU A 2 TYR A 8 5 ? 7 HELX_P HELX_P2 2 HIS A 38 ? THR A 42 ? HIS A 19 THR A 23 5 ? 5 HELX_P HELX_P3 3 ARG A 68 ? GLY A 78 ? ARG A 49 GLY A 59 1 ? 11 HELX_P HELX_P4 4 SER A 86 ? ASP A 88 ? SER A 67 ASP A 69 5 ? 3 HELX_P HELX_P5 5 VAL A 89 ? GLY A 97 ? VAL A 70 GLY A 78 1 ? 9 HELX_P HELX_P6 6 GLY A 101 ? MSE A 108 ? GLY A 82 MSE A 89 5 ? 8 HELX_P HELX_P7 7 ASP A 157 ? GLU A 161 ? ASP A 138 GLU A 142 5 ? 5 HELX_P HELX_P8 8 ASN A 166 ? LYS A 170 ? ASN A 147 LYS A 151 5 ? 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A GLY 19 C ? ? ? 1_555 A MSE 20 N ? ? A GLY 0 A MSE 1 1_555 ? ? ? ? ? ? ? 1.315 ? ? covale2 covale both ? A MSE 20 C ? ? ? 1_555 A GLU 21 N ? ? A MSE 1 A GLU 2 1_555 ? ? ? ? ? ? ? 1.330 ? ? covale3 covale both ? A PRO 28 C ? ? ? 1_555 A MSE 29 N ? ? A PRO 9 A MSE 10 1_555 ? ? ? ? ? ? ? 1.326 ? ? covale4 covale both ? A MSE 29 C ? ? ? 1_555 A ARG 30 N ? ? A MSE 10 A ARG 11 1_555 ? ? ? ? ? ? ? 1.307 ? ? covale5 covale both ? A VAL 44 C ? ? ? 1_555 A MSE 45 N ? ? A VAL 25 A MSE 26 1_555 ? ? ? ? ? ? ? 1.340 ? ? covale6 covale both ? A MSE 45 C ? ? ? 1_555 A ALA 46 N ? ? A MSE 26 A ALA 27 1_555 ? ? ? ? ? ? ? 1.326 ? ? covale7 covale both ? A GLU 107 C ? ? ? 1_555 A MSE 108 N ? ? A GLU 88 A MSE 89 1_555 ? ? ? ? ? ? ? 1.323 ? ? covale8 covale both ? A MSE 108 C ? ? ? 1_555 A SER 109 N ? ? A MSE 89 A SER 90 1_555 ? ? ? ? ? ? ? 1.325 ? ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 TYR 27 A . ? TYR 8 A PRO 28 A ? PRO 9 A 1 -0.79 2 ASP 56 A . ? ASP 37 A PRO 57 A ? PRO 38 A 1 1.33 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 3 ? B ? 7 ? C ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel B 4 5 ? anti-parallel B 5 6 ? anti-parallel B 6 7 ? anti-parallel C 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 MSE A 29 ? ARG A 30 ? MSE A 10 ARG A 11 A 2 ALA A 173 ? SER A 176 ? ALA A 154 SER A 157 A 3 GLU A 179 ? VAL A 181 ? GLU A 160 VAL A 162 B 1 ASN A 43 ? ALA A 47 ? ASN A 24 ALA A 28 B 2 TYR A 32 ? SER A 36 ? TYR A 13 SER A 17 B 3 GLU A 79 ? VAL A 84 ? GLU A 60 VAL A 65 B 4 ALA A 128 ? TYR A 140 ? ALA A 109 TYR A 121 B 5 HIS A 143 ? TYR A 155 ? HIS A 124 TYR A 136 B 6 ILE A 59 ? VAL A 64 ? ILE A 40 VAL A 45 B 7 VAL A 50 ? SER A 54 ? VAL A 31 SER A 35 C 1 LEU A 112 ? ILE A 113 ? LEU A 93 ILE A 94 C 2 SER A 122 ? ILE A 123 ? SER A 103 ILE A 104 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N MSE A 29 ? N MSE A 10 O HIS A 174 ? O HIS A 155 A 2 3 N VAL A 175 ? N VAL A 156 O GLU A 179 ? O GLU A 160 B 1 2 O ASN A 43 ? O ASN A 24 N SER A 36 ? N SER A 17 B 2 3 N VAL A 35 ? N VAL A 16 O VAL A 81 ? O VAL A 62 B 3 4 N PHE A 80 ? N PHE A 61 O CYS A 132 ? O CYS A 113 B 4 5 N ILE A 135 ? N ILE A 116 O VAL A 147 ? O VAL A 128 B 5 6 O THR A 144 ? O THR A 125 N VAL A 64 ? N VAL A 45 B 6 7 O ILE A 59 ? O ILE A 40 N VAL A 53 ? N VAL A 34 C 1 2 N ILE A 113 ? N ILE A 94 O SER A 122 ? O SER A 103 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A FMN 173 ? 21 'BINDING SITE FOR RESIDUE FMN A 173' AC2 Software A NCA 174 ? 5 'BINDING SITE FOR RESIDUE NCA A 174' AC3 Software A EDO 175 ? 5 'BINDING SITE FOR RESIDUE EDO A 175' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 21 ASN A 43 ? ASN A 24 . ? 1_555 ? 2 AC1 21 ALA A 46 ? ALA A 27 . ? 1_555 ? 3 AC1 21 ALA A 47 ? ALA A 28 . ? 1_555 ? 4 AC1 21 ASP A 48 ? ASP A 29 . ? 1_555 ? 5 AC1 21 TRP A 49 ? TRP A 30 . ? 1_555 ? 6 AC1 21 ALA A 63 ? ALA A 44 . ? 1_555 ? 7 AC1 21 ALA A 65 ? ALA A 46 . ? 1_555 ? 8 AC1 21 ARG A 68 ? ARG A 49 . ? 1_555 ? 9 AC1 21 THR A 69 ? THR A 50 . ? 1_555 ? 10 AC1 21 THR A 70 ? THR A 51 . ? 1_555 ? 11 AC1 21 ALA A 96 ? ALA A 77 . ? 1_555 ? 12 AC1 21 GLY A 97 ? GLY A 78 . ? 1_555 ? 13 AC1 21 THR A 98 ? THR A 79 . ? 1_555 ? 14 AC1 21 LYS A 99 ? LYS A 80 . ? 1_555 ? 15 AC1 21 LYS A 100 ? LYS A 81 . ? 1_555 ? 16 AC1 21 GLY A 101 ? GLY A 82 . ? 1_555 ? 17 AC1 21 LYS A 104 ? LYS A 85 . ? 1_555 ? 18 AC1 21 HIS A 143 ? HIS A 124 . ? 1_555 ? 19 AC1 21 HIS A 174 ? HIS A 155 . ? 1_555 ? 20 AC1 21 HOH E . ? HOH A 381 . ? 1_555 ? 21 AC1 21 HOH E . ? HOH A 382 . ? 1_555 ? 22 AC2 5 HIS A 12 ? HIS A -7 . ? 1_555 ? 23 AC2 5 TRP A 49 ? TRP A 30 . ? 1_555 ? 24 AC2 5 ARG A 68 ? ARG A 49 . ? 1_555 ? 25 AC2 5 HIS A 143 ? HIS A 124 . ? 1_555 ? 26 AC2 5 HOH E . ? HOH A 364 . ? 1_555 ? 27 AC3 5 HIS A 12 ? HIS A -7 . ? 1_555 ? 28 AC3 5 GLU A 13 ? GLU A -6 . ? 1_555 ? 29 AC3 5 ASP A 142 ? ASP A 123 . ? 1_555 ? 30 AC3 5 HIS A 143 ? HIS A 124 . ? 1_555 ? 31 AC3 5 HOH E . ? HOH A 301 . ? 1_555 ? # _atom_sites.entry_id 2R6V _atom_sites.fract_transf_matrix[1][1] 0.02165 _atom_sites.fract_transf_matrix[1][2] 0.01250 _atom_sites.fract_transf_matrix[1][3] 0.00000 _atom_sites.fract_transf_matrix[2][1] 0.00000 _atom_sites.fract_transf_matrix[2][2] 0.02499 _atom_sites.fract_transf_matrix[2][3] 0.00000 _atom_sites.fract_transf_matrix[3][1] 0.00000 _atom_sites.fract_transf_matrix[3][2] 0.00000 _atom_sites.fract_transf_matrix[3][3] 0.00374 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O P S SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MSE 1 -18 ? ? ? A . n A 1 2 GLY 2 -17 ? ? ? A . n A 1 3 SER 3 -16 ? ? ? A . n A 1 4 ASP 4 -15 ? ? ? A . n A 1 5 LYS 5 -14 ? ? ? A . n A 1 6 ILE 6 -13 ? ? ? A . n A 1 7 HIS 7 -12 ? ? ? A . n A 1 8 HIS 8 -11 ? ? ? A . n A 1 9 HIS 9 -10 ? ? ? A . n A 1 10 HIS 10 -9 -9 HIS HIS A . n A 1 11 HIS 11 -8 -8 HIS HIS A . n A 1 12 HIS 12 -7 -7 HIS HIS A . n A 1 13 GLU 13 -6 -6 GLU GLU A . n A 1 14 ASN 14 -5 -5 ASN ASN A . n A 1 15 LEU 15 -4 -4 LEU LEU A . n A 1 16 TYR 16 -3 -3 TYR TYR A . n A 1 17 PHE 17 -2 -2 PHE PHE A . n A 1 18 GLN 18 -1 -1 GLN GLN A . n A 1 19 GLY 19 0 0 GLY GLY A . n A 1 20 MSE 20 1 1 MSE MSE A . n A 1 21 GLU 21 2 2 GLU GLU A . n A 1 22 GLY 22 3 3 GLY GLY A . n A 1 23 TYR 23 4 4 TYR TYR A . n A 1 24 ARG 24 5 5 ARG ARG A . n A 1 25 LEU 25 6 6 LEU LEU A . n A 1 26 LEU 26 7 7 LEU LEU A . n A 1 27 TYR 27 8 8 TYR TYR A . n A 1 28 PRO 28 9 9 PRO PRO A . n A 1 29 MSE 29 10 10 MSE MSE A . n A 1 30 ARG 30 11 11 ARG ARG A . n A 1 31 THR 31 12 12 THR THR A . n A 1 32 TYR 32 13 13 TYR TYR A . n A 1 33 LEU 33 14 14 LEU LEU A . n A 1 34 ILE 34 15 15 ILE ILE A . n A 1 35 VAL 35 16 16 VAL VAL A . n A 1 36 SER 36 17 17 SER SER A . n A 1 37 GLY 37 18 18 GLY GLY A . n A 1 38 HIS 38 19 19 HIS HIS A . n A 1 39 GLY 39 20 20 GLY GLY A . n A 1 40 GLU 40 21 21 GLU GLU A . n A 1 41 GLU 41 22 22 GLU GLU A . n A 1 42 THR 42 23 23 THR THR A . n A 1 43 ASN 43 24 24 ASN ASN A . n A 1 44 VAL 44 25 25 VAL VAL A . n A 1 45 MSE 45 26 26 MSE MSE A . n A 1 46 ALA 46 27 27 ALA ALA A . n A 1 47 ALA 47 28 28 ALA ALA A . n A 1 48 ASP 48 29 29 ASP ASP A . n A 1 49 TRP 49 30 30 TRP TRP A . n A 1 50 VAL 50 31 31 VAL VAL A . n A 1 51 THR 51 32 32 THR THR A . n A 1 52 VAL 52 33 33 VAL VAL A . n A 1 53 VAL 53 34 34 VAL VAL A . n A 1 54 SER 54 35 35 SER SER A . n A 1 55 PHE 55 36 36 PHE PHE A . n A 1 56 ASP 56 37 37 ASP ASP A . n A 1 57 PRO 57 38 38 PRO PRO A . n A 1 58 PHE 58 39 39 PHE PHE A . n A 1 59 ILE 59 40 40 ILE ILE A . n A 1 60 VAL 60 41 41 VAL VAL A . n A 1 61 GLY 61 42 42 GLY GLY A . n A 1 62 VAL 62 43 43 VAL VAL A . n A 1 63 ALA 63 44 44 ALA ALA A . n A 1 64 VAL 64 45 45 VAL VAL A . n A 1 65 ALA 65 46 46 ALA ALA A . n A 1 66 PRO 66 47 47 PRO PRO A . n A 1 67 LYS 67 48 48 LYS LYS A . n A 1 68 ARG 68 49 49 ARG ARG A . n A 1 69 THR 69 50 50 THR THR A . n A 1 70 THR 70 51 51 THR THR A . n A 1 71 HIS 71 52 52 HIS HIS A . n A 1 72 LYS 72 53 53 LYS LYS A . n A 1 73 LEU 73 54 54 LEU LEU A . n A 1 74 ILE 74 55 55 ILE ILE A . n A 1 75 LYS 75 56 56 LYS LYS A . n A 1 76 LYS 76 57 57 LYS LYS A . n A 1 77 TYR 77 58 58 TYR TYR A . n A 1 78 GLY 78 59 59 GLY GLY A . n A 1 79 GLU 79 60 60 GLU GLU A . n A 1 80 PHE 80 61 61 PHE PHE A . n A 1 81 VAL 81 62 62 VAL VAL A . n A 1 82 ILE 82 63 63 ILE ILE A . n A 1 83 SER 83 64 64 SER SER A . n A 1 84 VAL 84 65 65 VAL VAL A . n A 1 85 PRO 85 66 66 PRO PRO A . n A 1 86 SER 86 67 67 SER SER A . n A 1 87 LEU 87 68 68 LEU LEU A . n A 1 88 ASP 88 69 69 ASP ASP A . n A 1 89 VAL 89 70 70 VAL VAL A . n A 1 90 LEU 90 71 71 LEU LEU A . n A 1 91 ARG 91 72 72 ARG ARG A . n A 1 92 ASP 92 73 73 ASP ASP A . n A 1 93 VAL 93 74 74 VAL VAL A . n A 1 94 TRP 94 75 75 TRP TRP A . n A 1 95 ILE 95 76 76 ILE ILE A . n A 1 96 ALA 96 77 77 ALA ALA A . n A 1 97 GLY 97 78 78 GLY GLY A . n A 1 98 THR 98 79 79 THR THR A . n A 1 99 LYS 99 80 80 LYS LYS A . n A 1 100 LYS 100 81 81 LYS LYS A . n A 1 101 GLY 101 82 82 GLY GLY A . n A 1 102 PRO 102 83 83 PRO PRO A . n A 1 103 SER 103 84 84 SER SER A . n A 1 104 LYS 104 85 85 LYS LYS A . n A 1 105 LEU 105 86 86 LEU LEU A . n A 1 106 LYS 106 87 87 LYS LYS A . n A 1 107 GLU 107 88 88 GLU GLU A . n A 1 108 MSE 108 89 89 MSE MSE A . n A 1 109 SER 109 90 90 SER SER A . n A 1 110 VAL 110 91 91 VAL VAL A . n A 1 111 THR 111 92 92 THR THR A . n A 1 112 LEU 112 93 93 LEU LEU A . n A 1 113 ILE 113 94 94 ILE ILE A . n A 1 114 PRO 114 95 95 PRO PRO A . n A 1 115 SER 115 96 96 SER SER A . n A 1 116 LYS 116 97 97 LYS LYS A . n A 1 117 LYS 117 98 98 LYS LYS A . n A 1 118 VAL 118 99 99 VAL VAL A . n A 1 119 LYS 119 100 100 LYS LYS A . n A 1 120 VAL 120 101 101 VAL VAL A . n A 1 121 PRO 121 102 102 PRO PRO A . n A 1 122 SER 122 103 103 SER SER A . n A 1 123 ILE 123 104 104 ILE ILE A . n A 1 124 GLU 124 105 105 GLU GLU A . n A 1 125 GLU 125 106 106 GLU GLU A . n A 1 126 ALA 126 107 107 ALA ALA A . n A 1 127 LEU 127 108 108 LEU LEU A . n A 1 128 ALA 128 109 109 ALA ALA A . n A 1 129 ASN 129 110 110 ASN ASN A . n A 1 130 ILE 130 111 111 ILE ILE A . n A 1 131 GLU 131 112 112 GLU GLU A . n A 1 132 CYS 132 113 113 CYS CYS A . n A 1 133 ARG 133 114 114 ARG ARG A . n A 1 134 VAL 134 115 115 VAL VAL A . n A 1 135 ILE 135 116 116 ILE ILE A . n A 1 136 ASP 136 117 117 ASP ASP A . n A 1 137 ALA 137 118 118 ALA ALA A . n A 1 138 ARG 138 119 119 ARG ARG A . n A 1 139 SER 139 120 120 SER SER A . n A 1 140 TYR 140 121 121 TYR TYR A . n A 1 141 GLY 141 122 122 GLY GLY A . n A 1 142 ASP 142 123 123 ASP ASP A . n A 1 143 HIS 143 124 124 HIS HIS A . n A 1 144 THR 144 125 125 THR THR A . n A 1 145 PHE 145 126 126 PHE PHE A . n A 1 146 PHE 146 127 127 PHE PHE A . n A 1 147 VAL 147 128 128 VAL VAL A . n A 1 148 GLY 148 129 129 GLY GLY A . n A 1 149 GLU 149 130 130 GLU GLU A . n A 1 150 VAL 150 131 131 VAL VAL A . n A 1 151 VAL 151 132 132 VAL VAL A . n A 1 152 GLY 152 133 133 GLY GLY A . n A 1 153 TYR 153 134 134 TYR TYR A . n A 1 154 THR 154 135 135 THR THR A . n A 1 155 TYR 155 136 136 TYR TYR A . n A 1 156 LYS 156 137 137 LYS LYS A . n A 1 157 ASP 157 138 138 ASP ASP A . n A 1 158 TYR 158 139 139 TYR TYR A . n A 1 159 ALA 159 140 140 ALA ALA A . n A 1 160 PHE 160 141 141 PHE PHE A . n A 1 161 GLU 161 142 142 GLU GLU A . n A 1 162 LYS 162 143 143 LYS LYS A . n A 1 163 GLY 163 144 144 GLY GLY A . n A 1 164 LYS 164 145 145 LYS LYS A . n A 1 165 PRO 165 146 146 PRO PRO A . n A 1 166 ASN 166 147 147 ASN ASN A . n A 1 167 LEU 167 148 148 LEU LEU A . n A 1 168 LYS 168 149 149 LYS LYS A . n A 1 169 ALA 169 150 150 ALA ALA A . n A 1 170 LYS 170 151 151 LYS LYS A . n A 1 171 PHE 171 152 152 PHE PHE A . n A 1 172 LEU 172 153 153 LEU LEU A . n A 1 173 ALA 173 154 154 ALA ALA A . n A 1 174 HIS 174 155 155 HIS HIS A . n A 1 175 VAL 175 156 156 VAL VAL A . n A 1 176 SER 176 157 157 SER SER A . n A 1 177 TRP 177 158 158 TRP TRP A . n A 1 178 SER 178 159 159 SER SER A . n A 1 179 GLU 179 160 160 GLU GLU A . n A 1 180 PHE 180 161 161 PHE PHE A . n A 1 181 VAL 181 162 162 VAL VAL A . n A 1 182 THR 182 163 163 THR THR A . n A 1 183 PHE 183 164 164 PHE PHE A . n A 1 184 SER 184 165 165 SER SER A . n A 1 185 GLU 185 166 166 GLU GLU A . n A 1 186 LYS 186 167 167 LYS LYS A . n A 1 187 VAL 187 168 168 VAL VAL A . n A 1 188 HIS 188 169 169 HIS HIS A . n A 1 189 LYS 189 170 170 LYS LYS A . n A 1 190 ALA 190 171 171 ALA ALA A . n A 1 191 GLU 191 172 172 GLU GLU A . n # _pdbx_SG_project.project_name 'PSI, Protein Structure Initiative' _pdbx_SG_project.full_name_of_center 'Joint Center for Structural Genomics' _pdbx_SG_project.id 1 _pdbx_SG_project.initial_of_center JCSG # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 FMN 1 173 1 FMN FMN A . C 3 NCA 1 174 2 NCA NCA A . D 4 EDO 1 175 3 EDO EDO A . E 5 HOH 1 176 4 HOH HOH A . E 5 HOH 2 177 5 HOH HOH A . E 5 HOH 3 178 6 HOH HOH A . E 5 HOH 4 179 7 HOH HOH A . E 5 HOH 5 180 8 HOH HOH A . E 5 HOH 6 181 9 HOH HOH A . E 5 HOH 7 182 10 HOH HOH A . E 5 HOH 8 183 11 HOH HOH A . E 5 HOH 9 184 12 HOH HOH A . E 5 HOH 10 185 13 HOH HOH A . E 5 HOH 11 186 14 HOH HOH A . E 5 HOH 12 187 15 HOH HOH A . E 5 HOH 13 188 16 HOH HOH A . E 5 HOH 14 189 17 HOH HOH A . E 5 HOH 15 190 18 HOH HOH A . E 5 HOH 16 191 19 HOH HOH A . E 5 HOH 17 192 20 HOH HOH A . E 5 HOH 18 193 21 HOH HOH A . E 5 HOH 19 194 22 HOH HOH A . E 5 HOH 20 195 23 HOH HOH A . E 5 HOH 21 196 24 HOH HOH A . E 5 HOH 22 197 25 HOH HOH A . E 5 HOH 23 198 26 HOH HOH A . E 5 HOH 24 199 27 HOH HOH A . E 5 HOH 25 200 28 HOH HOH A . E 5 HOH 26 201 29 HOH HOH A . E 5 HOH 27 202 30 HOH HOH A . E 5 HOH 28 203 31 HOH HOH A . E 5 HOH 29 204 32 HOH HOH A . E 5 HOH 30 205 33 HOH HOH A . E 5 HOH 31 206 34 HOH HOH A . E 5 HOH 32 207 35 HOH HOH A . E 5 HOH 33 208 36 HOH HOH A . E 5 HOH 34 209 37 HOH HOH A . E 5 HOH 35 210 38 HOH HOH A . E 5 HOH 36 211 39 HOH HOH A . E 5 HOH 37 212 40 HOH HOH A . E 5 HOH 38 213 41 HOH HOH A . E 5 HOH 39 214 42 HOH HOH A . E 5 HOH 40 215 43 HOH HOH A . E 5 HOH 41 216 44 HOH HOH A . E 5 HOH 42 217 45 HOH HOH A . E 5 HOH 43 218 46 HOH HOH A . E 5 HOH 44 219 47 HOH HOH A . E 5 HOH 45 220 48 HOH HOH A . E 5 HOH 46 221 49 HOH HOH A . E 5 HOH 47 222 50 HOH HOH A . E 5 HOH 48 223 51 HOH HOH A . E 5 HOH 49 224 52 HOH HOH A . E 5 HOH 50 225 53 HOH HOH A . E 5 HOH 51 226 54 HOH HOH A . E 5 HOH 52 227 55 HOH HOH A . E 5 HOH 53 228 56 HOH HOH A . E 5 HOH 54 229 57 HOH HOH A . E 5 HOH 55 230 58 HOH HOH A . E 5 HOH 56 231 59 HOH HOH A . E 5 HOH 57 232 60 HOH HOH A . E 5 HOH 58 233 61 HOH HOH A . E 5 HOH 59 234 62 HOH HOH A . E 5 HOH 60 235 63 HOH HOH A . E 5 HOH 61 236 64 HOH HOH A . E 5 HOH 62 237 65 HOH HOH A . E 5 HOH 63 238 66 HOH HOH A . E 5 HOH 64 239 67 HOH HOH A . E 5 HOH 65 240 68 HOH HOH A . E 5 HOH 66 241 69 HOH HOH A . E 5 HOH 67 242 70 HOH HOH A . E 5 HOH 68 243 71 HOH HOH A . E 5 HOH 69 244 72 HOH HOH A . E 5 HOH 70 245 73 HOH HOH A . E 5 HOH 71 246 74 HOH HOH A . E 5 HOH 72 247 75 HOH HOH A . E 5 HOH 73 248 76 HOH HOH A . E 5 HOH 74 249 77 HOH HOH A . E 5 HOH 75 250 78 HOH HOH A . E 5 HOH 76 251 79 HOH HOH A . E 5 HOH 77 252 80 HOH HOH A . E 5 HOH 78 253 81 HOH HOH A . E 5 HOH 79 254 82 HOH HOH A . E 5 HOH 80 255 83 HOH HOH A . E 5 HOH 81 256 84 HOH HOH A . E 5 HOH 82 257 85 HOH HOH A . E 5 HOH 83 258 86 HOH HOH A . E 5 HOH 84 259 87 HOH HOH A . E 5 HOH 85 260 88 HOH HOH A . E 5 HOH 86 261 89 HOH HOH A . E 5 HOH 87 262 90 HOH HOH A . E 5 HOH 88 263 91 HOH HOH A . E 5 HOH 89 264 92 HOH HOH A . E 5 HOH 90 265 93 HOH HOH A . E 5 HOH 91 266 94 HOH HOH A . E 5 HOH 92 267 95 HOH HOH A . E 5 HOH 93 268 96 HOH HOH A . E 5 HOH 94 269 97 HOH HOH A . E 5 HOH 95 270 98 HOH HOH A . E 5 HOH 96 271 99 HOH HOH A . E 5 HOH 97 272 100 HOH HOH A . E 5 HOH 98 273 101 HOH HOH A . E 5 HOH 99 274 102 HOH HOH A . E 5 HOH 100 275 103 HOH HOH A . E 5 HOH 101 276 104 HOH HOH A . E 5 HOH 102 277 105 HOH HOH A . E 5 HOH 103 278 106 HOH HOH A . E 5 HOH 104 279 107 HOH HOH A . E 5 HOH 105 280 108 HOH HOH A . E 5 HOH 106 281 109 HOH HOH A . E 5 HOH 107 282 110 HOH HOH A . E 5 HOH 108 283 111 HOH HOH A . E 5 HOH 109 284 112 HOH HOH A . E 5 HOH 110 285 113 HOH HOH A . E 5 HOH 111 286 114 HOH HOH A . E 5 HOH 112 287 115 HOH HOH A . E 5 HOH 113 288 116 HOH HOH A . E 5 HOH 114 289 117 HOH HOH A . E 5 HOH 115 290 118 HOH HOH A . E 5 HOH 116 291 119 HOH HOH A . E 5 HOH 117 292 120 HOH HOH A . E 5 HOH 118 293 121 HOH HOH A . E 5 HOH 119 294 122 HOH HOH A . E 5 HOH 120 295 123 HOH HOH A . E 5 HOH 121 296 124 HOH HOH A . E 5 HOH 122 297 125 HOH HOH A . E 5 HOH 123 298 126 HOH HOH A . E 5 HOH 124 299 127 HOH HOH A . E 5 HOH 125 300 128 HOH HOH A . E 5 HOH 126 301 129 HOH HOH A . E 5 HOH 127 302 130 HOH HOH A . E 5 HOH 128 303 131 HOH HOH A . E 5 HOH 129 304 132 HOH HOH A . E 5 HOH 130 305 133 HOH HOH A . E 5 HOH 131 306 134 HOH HOH A . E 5 HOH 132 307 135 HOH HOH A . E 5 HOH 133 308 136 HOH HOH A . E 5 HOH 134 309 137 HOH HOH A . E 5 HOH 135 310 138 HOH HOH A . E 5 HOH 136 311 139 HOH HOH A . E 5 HOH 137 312 140 HOH HOH A . E 5 HOH 138 313 141 HOH HOH A . E 5 HOH 139 314 142 HOH HOH A . E 5 HOH 140 315 143 HOH HOH A . E 5 HOH 141 316 144 HOH HOH A . E 5 HOH 142 317 145 HOH HOH A . E 5 HOH 143 318 146 HOH HOH A . E 5 HOH 144 319 147 HOH HOH A . E 5 HOH 145 320 148 HOH HOH A . E 5 HOH 146 321 149 HOH HOH A . E 5 HOH 147 322 150 HOH HOH A . E 5 HOH 148 323 151 HOH HOH A . E 5 HOH 149 324 152 HOH HOH A . E 5 HOH 150 325 153 HOH HOH A . E 5 HOH 151 326 154 HOH HOH A . E 5 HOH 152 327 155 HOH HOH A . E 5 HOH 153 328 156 HOH HOH A . E 5 HOH 154 329 157 HOH HOH A . E 5 HOH 155 330 158 HOH HOH A . E 5 HOH 156 331 159 HOH HOH A . E 5 HOH 157 332 160 HOH HOH A . E 5 HOH 158 333 161 HOH HOH A . E 5 HOH 159 334 162 HOH HOH A . E 5 HOH 160 335 163 HOH HOH A . E 5 HOH 161 336 164 HOH HOH A . E 5 HOH 162 337 165 HOH HOH A . E 5 HOH 163 338 166 HOH HOH A . E 5 HOH 164 339 167 HOH HOH A . E 5 HOH 165 340 168 HOH HOH A . E 5 HOH 166 341 169 HOH HOH A . E 5 HOH 167 342 170 HOH HOH A . E 5 HOH 168 343 171 HOH HOH A . E 5 HOH 169 344 172 HOH HOH A . E 5 HOH 170 345 173 HOH HOH A . E 5 HOH 171 346 174 HOH HOH A . E 5 HOH 172 347 175 HOH HOH A . E 5 HOH 173 348 176 HOH HOH A . E 5 HOH 174 349 177 HOH HOH A . E 5 HOH 175 350 178 HOH HOH A . E 5 HOH 176 351 179 HOH HOH A . E 5 HOH 177 352 180 HOH HOH A . E 5 HOH 178 353 181 HOH HOH A . E 5 HOH 179 354 182 HOH HOH A . E 5 HOH 180 355 183 HOH HOH A . E 5 HOH 181 356 184 HOH HOH A . E 5 HOH 182 357 185 HOH HOH A . E 5 HOH 183 358 186 HOH HOH A . E 5 HOH 184 359 187 HOH HOH A . E 5 HOH 185 360 188 HOH HOH A . E 5 HOH 186 361 189 HOH HOH A . E 5 HOH 187 362 190 HOH HOH A . E 5 HOH 188 363 191 HOH HOH A . E 5 HOH 189 364 192 HOH HOH A . E 5 HOH 190 365 193 HOH HOH A . E 5 HOH 191 366 194 HOH HOH A . E 5 HOH 192 367 195 HOH HOH A . E 5 HOH 193 368 196 HOH HOH A . E 5 HOH 194 369 197 HOH HOH A . E 5 HOH 195 370 198 HOH HOH A . E 5 HOH 196 371 199 HOH HOH A . E 5 HOH 197 372 200 HOH HOH A . E 5 HOH 198 373 201 HOH HOH A . E 5 HOH 199 374 202 HOH HOH A . E 5 HOH 200 375 203 HOH HOH A . E 5 HOH 201 376 204 HOH HOH A . E 5 HOH 202 377 205 HOH HOH A . E 5 HOH 203 378 206 HOH HOH A . E 5 HOH 204 379 207 HOH HOH A . E 5 HOH 205 380 208 HOH HOH A . E 5 HOH 206 381 209 HOH HOH A . E 5 HOH 207 382 210 HOH HOH A . E 5 HOH 208 383 211 HOH HOH A . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 20 A MSE 1 ? MET SELENOMETHIONINE 2 A MSE 29 A MSE 10 ? MET SELENOMETHIONINE 3 A MSE 45 A MSE 26 ? MET SELENOMETHIONINE 4 A MSE 108 A MSE 89 ? MET SELENOMETHIONINE # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E # _pdbx_struct_assembly_prop.biol_id 1 _pdbx_struct_assembly_prop.type 'ABSA (A^2)' _pdbx_struct_assembly_prop.value 14250 _pdbx_struct_assembly_prop.details ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 12_555 x,x-y,-z+1/6 0.5000000000 0.8660254038 0.0000000000 0.0000000000 0.8660254038 -0.5000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 44.5983333333 # loop_ _pdbx_struct_special_symmetry.id _pdbx_struct_special_symmetry.PDB_model_num _pdbx_struct_special_symmetry.auth_asym_id _pdbx_struct_special_symmetry.auth_comp_id _pdbx_struct_special_symmetry.auth_seq_id _pdbx_struct_special_symmetry.PDB_ins_code _pdbx_struct_special_symmetry.label_asym_id _pdbx_struct_special_symmetry.label_comp_id _pdbx_struct_special_symmetry.label_seq_id 1 1 A HOH 183 ? E HOH . 2 1 A HOH 269 ? E HOH . # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2007-09-25 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2017-10-25 4 'Structure model' 1 3 2019-07-24 5 'Structure model' 1 4 2023-01-25 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Source and taxonomy' 2 2 'Structure model' 'Version format compliance' 3 3 'Structure model' 'Refinement description' 4 4 'Structure model' 'Data collection' 5 4 'Structure model' 'Derived calculations' 6 4 'Structure model' 'Refinement description' 7 5 'Structure model' 'Database references' 8 5 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' software 2 4 'Structure model' software 3 4 'Structure model' struct_conn 4 5 'Structure model' database_2 5 5 'Structure model' struct_ref_seq_dif 6 5 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_software.classification' 2 3 'Structure model' '_software.name' 3 4 'Structure model' '_software.classification' 4 4 'Structure model' '_software.contact_author' 5 4 'Structure model' '_software.contact_author_email' 6 4 'Structure model' '_software.language' 7 4 'Structure model' '_software.location' 8 4 'Structure model' '_software.name' 9 4 'Structure model' '_software.type' 10 4 'Structure model' '_software.version' 11 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 12 5 'Structure model' '_database_2.pdbx_DOI' 13 5 'Structure model' '_database_2.pdbx_database_accession' 14 5 'Structure model' '_struct_ref_seq_dif.details' 15 5 'Structure model' '_struct_site.pdbx_auth_asym_id' 16 5 'Structure model' '_struct_site.pdbx_auth_comp_id' 17 5 'Structure model' '_struct_site.pdbx_auth_seq_id' # _phasing.method MAD # loop_ _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id _software.pdbx_ordinal REFMAC 5.2.0019 ? program 'Murshudov, G.N.' ccp4@dl.ac.uk refinement http://www.ccp4.ac.uk/main.html Fortran_77 ? 1 PHENIX . ? package 'P.D. Adams' PDAdams@lbl.gov refinement http://www.phenix-online.org/ C++ ? 2 SHELX . ? package 'George Sheldrick' gsheldr@shelx.uni-ac.gwdg.de phasing http://shelx.uni-ac.gwdg.de/SHELX/ Fortran_77 ? 3 MolProbity 3beta29 ? package 'D.C. & J.S. Richardson lab' molprobity@kinemage.biochem.duke.edu 'model building' http://kinemage.biochem.duke.edu/molprobity/ ? ? 4 XSCALE . ? package 'Wolfgang Kabsch' ? 'data scaling' http://www.mpimf-heidelberg.mpg.de/~kabsch/xds/xscale_program.html ? ? 5 PDB_EXTRACT 2.000 'April. 3, 2006' package PDB sw-help@rcsb.rutgers.edu 'data extraction' http://pdb.rutgers.edu/software/ C++ ? 6 MAR345 CCD ? ? ? ? 'data collection' ? ? ? 7 XDS . ? ? ? ? 'data reduction' ? ? ? 8 SHELXD . ? ? ? ? phasing ? ? ? 9 autoSHARP . ? ? ? ? phasing ? ? ? 10 # _pdbx_database_remark.id 999 _pdbx_database_remark.text ; SEQUENCE THE CONSTRUCT WAS EXPRESSED WITH A PURIFICATION TAG MGSDKIHHHHHHENLYFQG. ; # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 NH2 _pdbx_validate_close_contact.auth_asym_id_1 A _pdbx_validate_close_contact.auth_comp_id_1 ARG _pdbx_validate_close_contact.auth_seq_id_1 5 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 B _pdbx_validate_close_contact.auth_atom_id_2 O _pdbx_validate_close_contact.auth_asym_id_2 A _pdbx_validate_close_contact.auth_comp_id_2 HOH _pdbx_validate_close_contact.auth_seq_id_2 285 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 2.05 # loop_ _pdbx_validate_symm_contact.id _pdbx_validate_symm_contact.PDB_model_num _pdbx_validate_symm_contact.auth_atom_id_1 _pdbx_validate_symm_contact.auth_asym_id_1 _pdbx_validate_symm_contact.auth_comp_id_1 _pdbx_validate_symm_contact.auth_seq_id_1 _pdbx_validate_symm_contact.PDB_ins_code_1 _pdbx_validate_symm_contact.label_alt_id_1 _pdbx_validate_symm_contact.site_symmetry_1 _pdbx_validate_symm_contact.auth_atom_id_2 _pdbx_validate_symm_contact.auth_asym_id_2 _pdbx_validate_symm_contact.auth_comp_id_2 _pdbx_validate_symm_contact.auth_seq_id_2 _pdbx_validate_symm_contact.PDB_ins_code_2 _pdbx_validate_symm_contact.label_alt_id_2 _pdbx_validate_symm_contact.site_symmetry_2 _pdbx_validate_symm_contact.dist 1 1 CE1 A HIS 19 ? B 1_555 CD A LYS 100 ? ? 7_555 2.08 2 1 OD1 A ASP 138 ? B 1_555 O A HOH 308 ? ? 1_565 2.10 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ALA A 118 ? B -160.63 71.66 2 1 SER A 157 ? B -178.32 146.65 3 1 TRP A 158 ? A -30.99 -71.66 4 1 TRP A 158 ? B 26.96 -95.70 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A LYS 87 ? NZ ? A LYS 106 NZ 2 1 Y 1 A LYS 98 ? NZ ? A LYS 117 NZ 3 1 Y 1 A LYS 100 ? CE ? A LYS 119 CE 4 1 Y 1 A LYS 100 ? NZ ? A LYS 119 NZ 5 1 Y 1 A LYS 143 ? CG ? A LYS 162 CG 6 1 Y 1 A LYS 143 ? CD ? A LYS 162 CD 7 1 Y 1 A LYS 143 ? CE ? A LYS 162 CE 8 1 Y 1 A LYS 143 ? NZ ? A LYS 162 NZ 9 1 Y 1 A LYS 145 ? NZ ? A LYS 164 NZ 10 1 Y 1 A LYS 167 ? CD ? A LYS 186 CD 11 1 Y 1 A LYS 167 ? CE ? A LYS 186 CE 12 1 Y 1 A LYS 167 ? NZ ? A LYS 186 NZ 13 1 Y 1 A LYS 170 ? CE ? A LYS 189 CE 14 1 Y 1 A LYS 170 ? NZ ? A LYS 189 NZ # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MSE -18 ? A MSE 1 2 1 Y 1 A GLY -17 ? A GLY 2 3 1 Y 1 A SER -16 ? A SER 3 4 1 Y 1 A ASP -15 ? A ASP 4 5 1 Y 1 A LYS -14 ? A LYS 5 6 1 Y 1 A ILE -13 ? A ILE 6 7 1 Y 1 A HIS -12 ? A HIS 7 8 1 Y 1 A HIS -11 ? A HIS 8 9 1 Y 1 A HIS -10 ? A HIS 9 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'FLAVIN MONONUCLEOTIDE' FMN 3 NICOTINAMIDE NCA 4 1,2-ETHANEDIOL EDO 5 water HOH #