data_2RDG # _entry.id 2RDG # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.380 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2RDG pdb_00002rdg 10.2210/pdb2rdg/pdb RCSB RCSB044727 ? ? WWPDB D_1000044727 ? ? # _pdbx_database_related.db_name PDB _pdbx_database_related.db_id 2RDH _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 2RDG _pdbx_database_status.recvd_initial_deposition_date 2007-09-24 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Chung, M.C.' 1 'Wines, B.D.' 2 'Baker, H.' 3 'Langley, R.J.' 4 'Baker, E.N.' 5 'Fraser, J.D.' 6 # _citation.id primary _citation.title ;The crystal structure of staphylococcal superantigen-like protein 11 in complex with sialyl Lewis X reveals the mechanism for cell binding and immune inhibition ; _citation.journal_abbrev Mol.Microbiol. _citation.journal_volume 66 _citation.page_first 1342 _citation.page_last 1355 _citation.year 2007 _citation.journal_id_ASTM MOMIEE _citation.country UK _citation.journal_id_ISSN 0950-382X _citation.journal_id_CSD 2007 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 18045383 _citation.pdbx_database_id_DOI 10.1111/j.1365-2958.2007.05989.x # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Chung, M.C.' 1 ? primary 'Wines, B.D.' 2 ? primary 'Baker, H.' 3 ? primary 'Langley, R.J.' 4 ? primary 'Baker, E.N.' 5 ? primary 'Fraser, J.D.' 6 ? # _cell.entry_id 2RDG _cell.length_a 97.031 _cell.length_b 57.945 _cell.length_c 43.462 _cell.angle_alpha 90.00 _cell.angle_beta 101.83 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 2RDG _symmetry.space_group_name_H-M 'C 1 2 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Superantigen-like protein 11' 22687.262 1 ? ? ? ? 2 branched man ;N-acetyl-alpha-neuraminic acid-(2-3)-beta-D-galactopyranose-(1-4)-[alpha-L-fucopyranose-(1-3)]2-acetamido-2-deoxy-alpha-D-glucopyranose ; 820.744 1 ? ? ? ? 3 non-polymer syn 'POTASSIUM ION' 39.098 3 ? ? ? ? 4 non-polymer syn 'CITRIC ACID' 192.124 1 ? ? ? ? 5 water nat water 18.015 350 ? ? ? ? # _entity_name_com.entity_id 2 _entity_name_com.name 'Sialyl-Lewis X antigen, alpha anomer' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;STLEVRSQATQDLSEYYNRPYFDLRNLSGYREGNTVTFINHYQQTDVKLEGKDKDKIKDGNNENLDVFVVREGSGRQADN NSIGGITKTNRTQHIDTVQNVNLLVSKSTGQHTTSVTSTNYSIYKEEISLKELDFKLRKHLIDKHDLYKTEPKDSKIRVT MKNGDFYTFELNKKLQTHRMGDVIDGRNIEKIEVNL ; _entity_poly.pdbx_seq_one_letter_code_can ;STLEVRSQATQDLSEYYNRPYFDLRNLSGYREGNTVTFINHYQQTDVKLEGKDKDKIKDGNNENLDVFVVREGSGRQADN NSIGGITKTNRTQHIDTVQNVNLLVSKSTGQHTTSVTSTNYSIYKEEISLKELDFKLRKHLIDKHDLYKTEPKDSKIRVT MKNGDFYTFELNKKLQTHRMGDVIDGRNIEKIEVNL ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 SER n 1 2 THR n 1 3 LEU n 1 4 GLU n 1 5 VAL n 1 6 ARG n 1 7 SER n 1 8 GLN n 1 9 ALA n 1 10 THR n 1 11 GLN n 1 12 ASP n 1 13 LEU n 1 14 SER n 1 15 GLU n 1 16 TYR n 1 17 TYR n 1 18 ASN n 1 19 ARG n 1 20 PRO n 1 21 TYR n 1 22 PHE n 1 23 ASP n 1 24 LEU n 1 25 ARG n 1 26 ASN n 1 27 LEU n 1 28 SER n 1 29 GLY n 1 30 TYR n 1 31 ARG n 1 32 GLU n 1 33 GLY n 1 34 ASN n 1 35 THR n 1 36 VAL n 1 37 THR n 1 38 PHE n 1 39 ILE n 1 40 ASN n 1 41 HIS n 1 42 TYR n 1 43 GLN n 1 44 GLN n 1 45 THR n 1 46 ASP n 1 47 VAL n 1 48 LYS n 1 49 LEU n 1 50 GLU n 1 51 GLY n 1 52 LYS n 1 53 ASP n 1 54 LYS n 1 55 ASP n 1 56 LYS n 1 57 ILE n 1 58 LYS n 1 59 ASP n 1 60 GLY n 1 61 ASN n 1 62 ASN n 1 63 GLU n 1 64 ASN n 1 65 LEU n 1 66 ASP n 1 67 VAL n 1 68 PHE n 1 69 VAL n 1 70 VAL n 1 71 ARG n 1 72 GLU n 1 73 GLY n 1 74 SER n 1 75 GLY n 1 76 ARG n 1 77 GLN n 1 78 ALA n 1 79 ASP n 1 80 ASN n 1 81 ASN n 1 82 SER n 1 83 ILE n 1 84 GLY n 1 85 GLY n 1 86 ILE n 1 87 THR n 1 88 LYS n 1 89 THR n 1 90 ASN n 1 91 ARG n 1 92 THR n 1 93 GLN n 1 94 HIS n 1 95 ILE n 1 96 ASP n 1 97 THR n 1 98 VAL n 1 99 GLN n 1 100 ASN n 1 101 VAL n 1 102 ASN n 1 103 LEU n 1 104 LEU n 1 105 VAL n 1 106 SER n 1 107 LYS n 1 108 SER n 1 109 THR n 1 110 GLY n 1 111 GLN n 1 112 HIS n 1 113 THR n 1 114 THR n 1 115 SER n 1 116 VAL n 1 117 THR n 1 118 SER n 1 119 THR n 1 120 ASN n 1 121 TYR n 1 122 SER n 1 123 ILE n 1 124 TYR n 1 125 LYS n 1 126 GLU n 1 127 GLU n 1 128 ILE n 1 129 SER n 1 130 LEU n 1 131 LYS n 1 132 GLU n 1 133 LEU n 1 134 ASP n 1 135 PHE n 1 136 LYS n 1 137 LEU n 1 138 ARG n 1 139 LYS n 1 140 HIS n 1 141 LEU n 1 142 ILE n 1 143 ASP n 1 144 LYS n 1 145 HIS n 1 146 ASP n 1 147 LEU n 1 148 TYR n 1 149 LYS n 1 150 THR n 1 151 GLU n 1 152 PRO n 1 153 LYS n 1 154 ASP n 1 155 SER n 1 156 LYS n 1 157 ILE n 1 158 ARG n 1 159 VAL n 1 160 THR n 1 161 MET n 1 162 LYS n 1 163 ASN n 1 164 GLY n 1 165 ASP n 1 166 PHE n 1 167 TYR n 1 168 THR n 1 169 PHE n 1 170 GLU n 1 171 LEU n 1 172 ASN n 1 173 LYS n 1 174 LYS n 1 175 LEU n 1 176 GLN n 1 177 THR n 1 178 HIS n 1 179 ARG n 1 180 MET n 1 181 GLY n 1 182 ASP n 1 183 VAL n 1 184 ILE n 1 185 ASP n 1 186 GLY n 1 187 ARG n 1 188 ASN n 1 189 ILE n 1 190 GLU n 1 191 LYS n 1 192 ILE n 1 193 GLU n 1 194 VAL n 1 195 ASN n 1 196 LEU n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus Staphylococcus _entity_src_gen.pdbx_gene_src_gene SSL11 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain US6610 _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Staphylococcus aureus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 1280 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain AD494 _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type Plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET32a-3C _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code A8E1U5_STAAU _struct_ref.pdbx_db_accession A8E1U5 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;STLEVRSQATQDLSEYYNRPYFDLRNLSGYREGNTVTFINHYQQTDVKLEGKDKDKIKDGNNENLDVFVVREGSGRQADN NSIGGITKTNRTQHIDTVQNVNLLVSKSTGQHTTSVTSTNYSIYKEEISLKELDFKLRKHLIDKHDLYKTEPKDSKIRVT MKNGDFYTFELNKKLQTHRMGDVIDGRNIEKIEVNL ; _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 2RDG _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 196 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession A8E1U5 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 196 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 196 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CIT non-polymer . 'CITRIC ACID' ? 'C6 H8 O7' 192.124 FUC 'L-saccharide, alpha linking' . alpha-L-fucopyranose 'alpha-L-fucose; 6-deoxy-alpha-L-galactopyranose; L-fucose; fucose' 'C6 H12 O5' 164.156 GAL 'D-saccharide, beta linking' . beta-D-galactopyranose 'beta-D-galactose; D-galactose; galactose' 'C6 H12 O6' 180.156 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 K non-polymer . 'POTASSIUM ION' ? 'K 1' 39.098 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 NDG 'D-saccharide, alpha linking' . 2-acetamido-2-deoxy-alpha-D-glucopyranose ;N-acetyl-alpha-D-glucosamine; 2-acetamido-2-deoxy-alpha-D-glucose; 2-acetamido-2-deoxy-D-glucose; 2-acetamido-2-deoxy-glucose; 2-(ACETYLAMINO)-2-DEOXY-A-D-GLUCOPYRANOSE ; 'C8 H15 N O6' 221.208 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 SIA 'D-saccharide, alpha linking' . 'N-acetyl-alpha-neuraminic acid' 'N-acetylneuraminic acid; sialic acid; alpha-sialic acid; O-SIALIC ACID' 'C11 H19 N O9' 309.270 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 2RDG _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.64 _exptl_crystal.density_percent_sol 53.33 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.temp 291 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH ? _exptl_crystal_grow.pdbx_details '20% PEG3350, 0.2M potassium citrate, VAPOR DIFFUSION, SITTING DROP, temperature 291K' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 113 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'IMAGE PLATE' _diffrn_detector.type 'RIGAKU RAXIS IV' _diffrn_detector.pdbx_collection_date ? _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.5418 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source 'ROTATING ANODE' _diffrn_source.type 'RIGAKU MICROMAX-007 HF' _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.5418 # _reflns.entry_id 2RDG _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.d_resolution_high 1.6 _reflns.d_resolution_low 30.7 _reflns.number_all ? _reflns.number_obs 28611 _reflns.percent_possible_obs 91.5 _reflns.pdbx_Rmerge_I_obs 0.054 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 7.2 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 1.60 _reflns_shell.d_res_low 1.69 _reflns_shell.percent_possible_all 80.1 _reflns_shell.Rmerge_I_obs 0.114 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 10.1 _reflns_shell.pdbx_redundancy 7.1 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 3623 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 2RDG _refine.ls_number_reflns_obs 28588 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 22.45 _refine.ls_d_res_high 1.60 _refine.ls_percent_reflns_obs 91.63 _refine.ls_R_factor_obs 0.17576 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.17417 _refine.ls_R_factor_R_free 0.20656 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.0 _refine.ls_number_reflns_R_free 1430 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.959 _refine.correlation_coeff_Fo_to_Fc_free 0.940 _refine.B_iso_mean 23.827 _refine.aniso_B[1][1] -0.01 _refine.aniso_B[2][2] -0.03 _refine.aniso_B[3][3] 0.03 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] -0.03 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.pdbx_starting_model 'PDB ENTRY 1M4V' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.094 _refine.pdbx_overall_ESU_R_Free 0.094 _refine.overall_SU_ML 0.050 _refine.overall_SU_B 2.345 _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag 'LIKELY RESIDUAL' _refine.pdbx_diffrn_id 1 _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1553 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 72 _refine_hist.number_atoms_solvent 350 _refine_hist.number_atoms_total 1975 _refine_hist.d_res_high 1.60 _refine_hist.d_res_low 22.45 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.009 0.021 ? 1663 'X-RAY DIFFRACTION' ? r_bond_other_d ? ? ? ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.210 1.994 ? 2249 'X-RAY DIFFRACTION' ? r_angle_other_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 5.904 5.000 ? 197 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 39.395 25.233 ? 86 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 11.122 15.000 ? 304 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 13.582 15.000 ? 10 'X-RAY DIFFRACTION' ? r_chiral_restr 0.084 0.200 ? 261 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.004 0.020 ? 1230 'X-RAY DIFFRACTION' ? r_gen_planes_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_refined 0.202 0.200 ? 739 'X-RAY DIFFRACTION' ? r_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_refined 0.306 0.200 ? 1164 'X-RAY DIFFRACTION' ? r_nbtor_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 0.115 0.200 ? 286 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined 0.083 0.200 ? 5 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 0.152 0.200 ? 37 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 0.192 0.200 ? 31 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 0.549 1.500 ? 958 'X-RAY DIFFRACTION' ? r_mcbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcangle_it 1.003 2.000 ? 1560 'X-RAY DIFFRACTION' ? r_scbond_it 1.734 3.000 ? 714 'X-RAY DIFFRACTION' ? r_scangle_it 2.726 4.500 ? 686 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 1.600 _refine_ls_shell.d_res_low 1.64 _refine_ls_shell.number_reflns_R_work 1527 _refine_ls_shell.R_factor_R_work 0.249 _refine_ls_shell.percent_reflns_obs 70.66 _refine_ls_shell.R_factor_R_free 0.279 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 84 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 2RDG _struct.title 'Crystal structure of Staphylococcal Superantigen-Like protein 11 in complex with Sialyl Lewis X' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2RDG _struct_keywords.pdbx_keywords TOXIN _struct_keywords.text 'OB fold, beta grasp, protein-carbohydrate complex, TOXIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 3 ? E N N 3 ? F N N 4 ? G N N 5 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 SER A 7 ? ASN A 18 ? SER A 7 ASN A 18 1 ? 12 HELX_P HELX_P2 2 LYS A 52 ? ILE A 57 ? LYS A 52 ILE A 57 1 ? 6 HELX_P HELX_P3 3 GLN A 77 ? ASN A 81 ? GLN A 77 ASN A 81 5 ? 5 HELX_P HELX_P4 4 LEU A 130 ? HIS A 145 ? LEU A 130 HIS A 145 1 ? 16 HELX_P HELX_P5 5 GLN A 176 ? MET A 180 ? GLN A 176 MET A 180 5 ? 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? B NDG . O4 ? ? ? 1_555 B GAL . C1 ? ? B NDG 1 B GAL 2 1_555 ? ? ? ? ? ? ? 1.443 ? ? covale2 covale both ? B NDG . O3 ? ? ? 1_555 B FUC . C1 ? ? B NDG 1 B FUC 4 1_555 ? ? ? ? ? ? ? 1.449 ? ? covale3 covale both ? B GAL . O3 ? ? ? 1_555 B SIA . C2 ? ? B GAL 2 B SIA 3 1_555 ? ? ? ? ? ? ? 1.436 ? ? metalc1 metalc ? ? A GLN 11 OE1 ? ? ? 1_555 D K . K ? ? A GLN 11 A K 606 1_555 ? ? ? ? ? ? ? 2.777 ? ? metalc2 metalc ? ? A GLN 99 OE1 ? ? ? 1_555 C K . K ? ? A GLN 99 A K 605 1_555 ? ? ? ? ? ? ? 2.889 ? ? metalc3 metalc ? ? A ASN 100 O ? ? ? 1_555 C K . K ? ? A ASN 100 A K 605 1_555 ? ? ? ? ? ? ? 2.645 ? ? metalc4 metalc ? ? A SER 108 OG ? ? ? 1_555 E K . K ? ? A SER 108 A K 607 1_555 ? ? ? ? ? ? ? 2.961 ? ? metalc5 metalc ? ? A GLY 110 O ? ? ? 1_555 E K . K ? ? A GLY 110 A K 607 1_555 ? ? ? ? ? ? ? 2.900 ? ? metalc6 metalc ? ? C K . K ? ? ? 1_555 G HOH . O ? ? A K 605 A HOH 664 1_555 ? ? ? ? ? ? ? 2.728 ? ? metalc7 metalc ? ? C K . K ? ? ? 1_555 G HOH . O ? ? A K 605 A HOH 832 1_555 ? ? ? ? ? ? ? 2.910 ? ? metalc8 metalc ? ? C K . K ? ? ? 1_555 G HOH . O ? ? A K 605 A HOH 944 1_555 ? ? ? ? ? ? ? 2.697 ? ? metalc9 metalc ? ? D K . K ? ? ? 1_555 F CIT . O2 ? ? A K 606 A CIT 608 1_555 ? ? ? ? ? ? ? 2.764 ? ? metalc10 metalc ? ? D K . K ? ? ? 1_555 F CIT . O7 ? ? A K 606 A CIT 608 1_555 ? ? ? ? ? ? ? 2.896 ? ? metalc11 metalc ? ? D K . K ? ? ? 1_555 G HOH . O ? ? A K 606 A HOH 854 1_555 ? ? ? ? ? ? ? 2.996 ? ? metalc12 metalc ? ? E K . K ? ? ? 1_555 G HOH . O ? ? A K 607 A HOH 752 1_555 ? ? ? ? ? ? ? 2.935 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? metalc ? ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id SER _struct_mon_prot_cis.label_seq_id 74 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id SER _struct_mon_prot_cis.auth_seq_id 74 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 GLY _struct_mon_prot_cis.pdbx_label_seq_id_2 75 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 GLY _struct_mon_prot_cis.pdbx_auth_seq_id_2 75 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle 5.56 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 6 ? B ? 5 ? C ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel A 5 6 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? parallel B 3 4 ? anti-parallel B 4 5 ? anti-parallel C 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 SER A 82 ? ILE A 83 ? SER A 82 ILE A 83 A 2 GLN A 43 ? LYS A 48 ? GLN A 43 LYS A 48 A 3 THR A 35 ? ASN A 40 ? THR A 35 ASN A 40 A 4 TYR A 21 ? GLU A 32 ? TYR A 21 GLU A 32 A 5 GLY A 60 ? VAL A 70 ? GLY A 60 VAL A 70 A 6 ILE A 86 ? LYS A 88 ? ILE A 86 LYS A 88 B 1 THR A 114 ? ILE A 123 ? THR A 114 ILE A 123 B 2 GLN A 99 ? SER A 108 ? GLN A 99 SER A 108 B 3 ILE A 189 ? ASN A 195 ? ILE A 189 ASN A 195 B 4 LYS A 156 ? MET A 161 ? LYS A 156 MET A 161 B 5 PHE A 166 ? GLU A 170 ? PHE A 166 GLU A 170 C 1 GLU A 127 ? SER A 129 ? GLU A 127 SER A 129 C 2 VAL A 183 ? ASP A 185 ? VAL A 183 ASP A 185 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O SER A 82 ? O SER A 82 N LYS A 48 ? N LYS A 48 A 2 3 O VAL A 47 ? O VAL A 47 N VAL A 36 ? N VAL A 36 A 3 4 O THR A 37 ? O THR A 37 N TYR A 30 ? N TYR A 30 A 4 5 N PHE A 22 ? N PHE A 22 O VAL A 69 ? O VAL A 69 A 5 6 N ASP A 66 ? N ASP A 66 O THR A 87 ? O THR A 87 B 1 2 O TYR A 121 ? O TYR A 121 N VAL A 101 ? N VAL A 101 B 2 3 N LEU A 104 ? N LEU A 104 O VAL A 194 ? O VAL A 194 B 3 4 O GLU A 190 ? O GLU A 190 N THR A 160 ? N THR A 160 B 4 5 N VAL A 159 ? N VAL A 159 O TYR A 167 ? O TYR A 167 C 1 2 N ILE A 128 ? N ILE A 128 O ILE A 184 ? O ILE A 184 # _database_PDB_matrix.entry_id 2RDG _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 2RDG _atom_sites.fract_transf_matrix[1][1] 0.010306 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.002158 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.017258 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.023507 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C K N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 SER 1 1 ? ? ? A . n A 1 2 THR 2 2 ? ? ? A . n A 1 3 LEU 3 3 ? ? ? A . n A 1 4 GLU 4 4 ? ? ? A . n A 1 5 VAL 5 5 5 VAL VAL A . n A 1 6 ARG 6 6 6 ARG ARG A . n A 1 7 SER 7 7 7 SER SER A . n A 1 8 GLN 8 8 8 GLN GLN A . n A 1 9 ALA 9 9 9 ALA ALA A . n A 1 10 THR 10 10 10 THR THR A . n A 1 11 GLN 11 11 11 GLN GLN A . n A 1 12 ASP 12 12 12 ASP ASP A . n A 1 13 LEU 13 13 13 LEU LEU A . n A 1 14 SER 14 14 14 SER SER A . n A 1 15 GLU 15 15 15 GLU GLU A . n A 1 16 TYR 16 16 16 TYR TYR A . n A 1 17 TYR 17 17 17 TYR TYR A . n A 1 18 ASN 18 18 18 ASN ASN A . n A 1 19 ARG 19 19 19 ARG ARG A . n A 1 20 PRO 20 20 20 PRO PRO A . n A 1 21 TYR 21 21 21 TYR TYR A . n A 1 22 PHE 22 22 22 PHE PHE A . n A 1 23 ASP 23 23 23 ASP ASP A . n A 1 24 LEU 24 24 24 LEU LEU A . n A 1 25 ARG 25 25 25 ARG ARG A . n A 1 26 ASN 26 26 26 ASN ASN A . n A 1 27 LEU 27 27 27 LEU LEU A . n A 1 28 SER 28 28 28 SER SER A . n A 1 29 GLY 29 29 29 GLY GLY A . n A 1 30 TYR 30 30 30 TYR TYR A . n A 1 31 ARG 31 31 31 ARG ARG A . n A 1 32 GLU 32 32 32 GLU GLU A . n A 1 33 GLY 33 33 33 GLY GLY A . n A 1 34 ASN 34 34 34 ASN ASN A . n A 1 35 THR 35 35 35 THR THR A . n A 1 36 VAL 36 36 36 VAL VAL A . n A 1 37 THR 37 37 37 THR THR A . n A 1 38 PHE 38 38 38 PHE PHE A . n A 1 39 ILE 39 39 39 ILE ILE A . n A 1 40 ASN 40 40 40 ASN ASN A . n A 1 41 HIS 41 41 41 HIS HIS A . n A 1 42 TYR 42 42 42 TYR TYR A . n A 1 43 GLN 43 43 43 GLN GLN A . n A 1 44 GLN 44 44 44 GLN GLN A . n A 1 45 THR 45 45 45 THR THR A . n A 1 46 ASP 46 46 46 ASP ASP A . n A 1 47 VAL 47 47 47 VAL VAL A . n A 1 48 LYS 48 48 48 LYS LYS A . n A 1 49 LEU 49 49 49 LEU LEU A . n A 1 50 GLU 50 50 50 GLU GLU A . n A 1 51 GLY 51 51 51 GLY GLY A . n A 1 52 LYS 52 52 52 LYS LYS A . n A 1 53 ASP 53 53 53 ASP ASP A . n A 1 54 LYS 54 54 54 LYS LYS A . n A 1 55 ASP 55 55 55 ASP ASP A . n A 1 56 LYS 56 56 56 LYS LYS A . n A 1 57 ILE 57 57 57 ILE ILE A . n A 1 58 LYS 58 58 58 LYS LYS A . n A 1 59 ASP 59 59 59 ASP ASP A . n A 1 60 GLY 60 60 60 GLY GLY A . n A 1 61 ASN 61 61 61 ASN ASN A . n A 1 62 ASN 62 62 62 ASN ASN A . n A 1 63 GLU 63 63 63 GLU GLU A . n A 1 64 ASN 64 64 64 ASN ASN A . n A 1 65 LEU 65 65 65 LEU LEU A . n A 1 66 ASP 66 66 66 ASP ASP A . n A 1 67 VAL 67 67 67 VAL VAL A . n A 1 68 PHE 68 68 68 PHE PHE A . n A 1 69 VAL 69 69 69 VAL VAL A . n A 1 70 VAL 70 70 70 VAL VAL A . n A 1 71 ARG 71 71 71 ARG ARG A . n A 1 72 GLU 72 72 72 GLU GLU A . n A 1 73 GLY 73 73 73 GLY GLY A . n A 1 74 SER 74 74 74 SER SER A . n A 1 75 GLY 75 75 75 GLY GLY A . n A 1 76 ARG 76 76 76 ARG ARG A . n A 1 77 GLN 77 77 77 GLN GLN A . n A 1 78 ALA 78 78 78 ALA ALA A . n A 1 79 ASP 79 79 79 ASP ASP A . n A 1 80 ASN 80 80 80 ASN ASN A . n A 1 81 ASN 81 81 81 ASN ASN A . n A 1 82 SER 82 82 82 SER SER A . n A 1 83 ILE 83 83 83 ILE ILE A . n A 1 84 GLY 84 84 84 GLY GLY A . n A 1 85 GLY 85 85 85 GLY GLY A . n A 1 86 ILE 86 86 86 ILE ILE A . n A 1 87 THR 87 87 87 THR THR A . n A 1 88 LYS 88 88 88 LYS LYS A . n A 1 89 THR 89 89 89 THR THR A . n A 1 90 ASN 90 90 90 ASN ASN A . n A 1 91 ARG 91 91 91 ARG ARG A . n A 1 92 THR 92 92 92 THR THR A . n A 1 93 GLN 93 93 93 GLN GLN A . n A 1 94 HIS 94 94 94 HIS HIS A . n A 1 95 ILE 95 95 95 ILE ILE A . n A 1 96 ASP 96 96 96 ASP ASP A . n A 1 97 THR 97 97 97 THR THR A . n A 1 98 VAL 98 98 98 VAL VAL A . n A 1 99 GLN 99 99 99 GLN GLN A . n A 1 100 ASN 100 100 100 ASN ASN A . n A 1 101 VAL 101 101 101 VAL VAL A . n A 1 102 ASN 102 102 102 ASN ASN A . n A 1 103 LEU 103 103 103 LEU LEU A . n A 1 104 LEU 104 104 104 LEU LEU A . n A 1 105 VAL 105 105 105 VAL VAL A . n A 1 106 SER 106 106 106 SER SER A . n A 1 107 LYS 107 107 107 LYS LYS A . n A 1 108 SER 108 108 108 SER SER A . n A 1 109 THR 109 109 109 THR THR A . n A 1 110 GLY 110 110 110 GLY GLY A . n A 1 111 GLN 111 111 111 GLN GLN A . n A 1 112 HIS 112 112 112 HIS HIS A . n A 1 113 THR 113 113 113 THR THR A . n A 1 114 THR 114 114 114 THR THR A . n A 1 115 SER 115 115 115 SER SER A . n A 1 116 VAL 116 116 116 VAL VAL A . n A 1 117 THR 117 117 117 THR THR A . n A 1 118 SER 118 118 118 SER SER A . n A 1 119 THR 119 119 119 THR THR A . n A 1 120 ASN 120 120 120 ASN ASN A . n A 1 121 TYR 121 121 121 TYR TYR A . n A 1 122 SER 122 122 122 SER SER A . n A 1 123 ILE 123 123 123 ILE ILE A . n A 1 124 TYR 124 124 124 TYR TYR A . n A 1 125 LYS 125 125 125 LYS LYS A . n A 1 126 GLU 126 126 126 GLU GLU A . n A 1 127 GLU 127 127 127 GLU GLU A . n A 1 128 ILE 128 128 128 ILE ILE A . n A 1 129 SER 129 129 129 SER SER A . n A 1 130 LEU 130 130 130 LEU LEU A . n A 1 131 LYS 131 131 131 LYS LYS A . n A 1 132 GLU 132 132 132 GLU GLU A . n A 1 133 LEU 133 133 133 LEU LEU A . n A 1 134 ASP 134 134 134 ASP ASP A . n A 1 135 PHE 135 135 135 PHE PHE A . n A 1 136 LYS 136 136 136 LYS LYS A . n A 1 137 LEU 137 137 137 LEU LEU A . n A 1 138 ARG 138 138 138 ARG ARG A . n A 1 139 LYS 139 139 139 LYS LYS A . n A 1 140 HIS 140 140 140 HIS HIS A . n A 1 141 LEU 141 141 141 LEU LEU A . n A 1 142 ILE 142 142 142 ILE ILE A . n A 1 143 ASP 143 143 143 ASP ASP A . n A 1 144 LYS 144 144 144 LYS LYS A . n A 1 145 HIS 145 145 145 HIS HIS A . n A 1 146 ASP 146 146 146 ASP ASP A . n A 1 147 LEU 147 147 147 LEU LEU A . n A 1 148 TYR 148 148 148 TYR TYR A . n A 1 149 LYS 149 149 149 LYS LYS A . n A 1 150 THR 150 150 150 THR THR A . n A 1 151 GLU 151 151 151 GLU GLU A . n A 1 152 PRO 152 152 152 PRO PRO A . n A 1 153 LYS 153 153 153 LYS LYS A . n A 1 154 ASP 154 154 154 ASP ASP A . n A 1 155 SER 155 155 155 SER SER A . n A 1 156 LYS 156 156 156 LYS LYS A . n A 1 157 ILE 157 157 157 ILE ILE A . n A 1 158 ARG 158 158 158 ARG ARG A . n A 1 159 VAL 159 159 159 VAL VAL A . n A 1 160 THR 160 160 160 THR THR A . n A 1 161 MET 161 161 161 MET MET A . n A 1 162 LYS 162 162 162 LYS LYS A . n A 1 163 ASN 163 163 163 ASN ASN A . n A 1 164 GLY 164 164 164 GLY GLY A . n A 1 165 ASP 165 165 165 ASP ASP A . n A 1 166 PHE 166 166 166 PHE PHE A . n A 1 167 TYR 167 167 167 TYR TYR A . n A 1 168 THR 168 168 168 THR THR A . n A 1 169 PHE 169 169 169 PHE PHE A . n A 1 170 GLU 170 170 170 GLU GLU A . n A 1 171 LEU 171 171 171 LEU LEU A . n A 1 172 ASN 172 172 172 ASN ASN A . n A 1 173 LYS 173 173 173 LYS LYS A . n A 1 174 LYS 174 174 174 LYS LYS A . n A 1 175 LEU 175 175 175 LEU LEU A . n A 1 176 GLN 176 176 176 GLN GLN A . n A 1 177 THR 177 177 177 THR THR A . n A 1 178 HIS 178 178 178 HIS HIS A . n A 1 179 ARG 179 179 179 ARG ARG A . n A 1 180 MET 180 180 180 MET MET A . n A 1 181 GLY 181 181 181 GLY GLY A . n A 1 182 ASP 182 182 182 ASP ASP A . n A 1 183 VAL 183 183 183 VAL VAL A . n A 1 184 ILE 184 184 184 ILE ILE A . n A 1 185 ASP 185 185 185 ASP ASP A . n A 1 186 GLY 186 186 186 GLY GLY A . n A 1 187 ARG 187 187 187 ARG ARG A . n A 1 188 ASN 188 188 188 ASN ASN A . n A 1 189 ILE 189 189 189 ILE ILE A . n A 1 190 GLU 190 190 190 GLU GLU A . n A 1 191 LYS 191 191 191 LYS LYS A . n A 1 192 ILE 192 192 192 ILE ILE A . n A 1 193 GLU 193 193 193 GLU GLU A . n A 1 194 VAL 194 194 194 VAL VAL A . n A 1 195 ASN 195 195 195 ASN ASN A . n A 1 196 LEU 196 196 196 LEU LEU A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 K 1 605 1 K K A . D 3 K 1 606 2 K K A . E 3 K 1 607 3 K K A . F 4 CIT 1 608 159 CIT CIT A . G 5 HOH 1 609 1 HOH HOH A . G 5 HOH 2 610 2 HOH HOH A . G 5 HOH 3 611 4 HOH HOH A . G 5 HOH 4 612 5 HOH HOH A . G 5 HOH 5 613 6 HOH HOH A . G 5 HOH 6 614 7 HOH HOH A . G 5 HOH 7 615 8 HOH HOH A . G 5 HOH 8 616 9 HOH HOH A . G 5 HOH 9 617 10 HOH HOH A . G 5 HOH 10 618 11 HOH HOH A . G 5 HOH 11 619 12 HOH HOH A . G 5 HOH 12 620 13 HOH HOH A . G 5 HOH 13 621 14 HOH HOH A . G 5 HOH 14 622 15 HOH HOH A . G 5 HOH 15 623 16 HOH HOH A . G 5 HOH 16 624 17 HOH HOH A . G 5 HOH 17 625 18 HOH HOH A . G 5 HOH 18 626 19 HOH HOH A . G 5 HOH 19 627 20 HOH HOH A . G 5 HOH 20 628 21 HOH HOH A . G 5 HOH 21 629 22 HOH HOH A . G 5 HOH 22 630 23 HOH HOH A . G 5 HOH 23 631 24 HOH HOH A . G 5 HOH 24 632 25 HOH HOH A . G 5 HOH 25 633 26 HOH HOH A . G 5 HOH 26 634 27 HOH HOH A . G 5 HOH 27 635 28 HOH HOH A . G 5 HOH 28 636 29 HOH HOH A . G 5 HOH 29 637 30 HOH HOH A . G 5 HOH 30 638 31 HOH HOH A . G 5 HOH 31 639 32 HOH HOH A . G 5 HOH 32 640 33 HOH HOH A . G 5 HOH 33 641 34 HOH HOH A . G 5 HOH 34 642 35 HOH HOH A . G 5 HOH 35 643 36 HOH HOH A . G 5 HOH 36 644 37 HOH HOH A . G 5 HOH 37 645 38 HOH HOH A . G 5 HOH 38 646 39 HOH HOH A . G 5 HOH 39 647 40 HOH HOH A . G 5 HOH 40 648 41 HOH HOH A . G 5 HOH 41 649 42 HOH HOH A . G 5 HOH 42 650 43 HOH HOH A . G 5 HOH 43 651 44 HOH HOH A . G 5 HOH 44 652 45 HOH HOH A . G 5 HOH 45 653 46 HOH HOH A . G 5 HOH 46 654 47 HOH HOH A . G 5 HOH 47 655 48 HOH HOH A . G 5 HOH 48 656 49 HOH HOH A . G 5 HOH 49 657 50 HOH HOH A . G 5 HOH 50 658 51 HOH HOH A . G 5 HOH 51 659 52 HOH HOH A . G 5 HOH 52 660 53 HOH HOH A . G 5 HOH 53 661 54 HOH HOH A . G 5 HOH 54 662 55 HOH HOH A . G 5 HOH 55 663 56 HOH HOH A . G 5 HOH 56 664 57 HOH HOH A . G 5 HOH 57 665 58 HOH HOH A . G 5 HOH 58 666 59 HOH HOH A . G 5 HOH 59 667 60 HOH HOH A . G 5 HOH 60 668 61 HOH HOH A . G 5 HOH 61 669 62 HOH HOH A . G 5 HOH 62 670 63 HOH HOH A . G 5 HOH 63 671 64 HOH HOH A . G 5 HOH 64 672 65 HOH HOH A . G 5 HOH 65 673 66 HOH HOH A . G 5 HOH 66 674 67 HOH HOH A . G 5 HOH 67 675 68 HOH HOH A . G 5 HOH 68 676 69 HOH HOH A . G 5 HOH 69 677 70 HOH HOH A . G 5 HOH 70 678 71 HOH HOH A . G 5 HOH 71 679 72 HOH HOH A . G 5 HOH 72 680 73 HOH HOH A . G 5 HOH 73 681 74 HOH HOH A . G 5 HOH 74 682 75 HOH HOH A . G 5 HOH 75 683 76 HOH HOH A . G 5 HOH 76 684 77 HOH HOH A . G 5 HOH 77 685 78 HOH HOH A . G 5 HOH 78 686 79 HOH HOH A . G 5 HOH 79 687 80 HOH HOH A . G 5 HOH 80 688 81 HOH HOH A . G 5 HOH 81 689 82 HOH HOH A . G 5 HOH 82 690 83 HOH HOH A . G 5 HOH 83 691 84 HOH HOH A . G 5 HOH 84 692 85 HOH HOH A . G 5 HOH 85 693 87 HOH HOH A . G 5 HOH 86 694 88 HOH HOH A . G 5 HOH 87 695 89 HOH HOH A . G 5 HOH 88 696 90 HOH HOH A . G 5 HOH 89 697 91 HOH HOH A . G 5 HOH 90 698 92 HOH HOH A . G 5 HOH 91 699 93 HOH HOH A . G 5 HOH 92 700 94 HOH HOH A . G 5 HOH 93 701 95 HOH HOH A . G 5 HOH 94 702 96 HOH HOH A . G 5 HOH 95 703 97 HOH HOH A . G 5 HOH 96 704 98 HOH HOH A . G 5 HOH 97 705 99 HOH HOH A . G 5 HOH 98 706 100 HOH HOH A . G 5 HOH 99 707 101 HOH HOH A . G 5 HOH 100 708 102 HOH HOH A . G 5 HOH 101 709 103 HOH HOH A . G 5 HOH 102 710 104 HOH HOH A . G 5 HOH 103 711 105 HOH HOH A . G 5 HOH 104 712 106 HOH HOH A . G 5 HOH 105 713 107 HOH HOH A . G 5 HOH 106 714 108 HOH HOH A . G 5 HOH 107 715 109 HOH HOH A . G 5 HOH 108 716 110 HOH HOH A . G 5 HOH 109 717 111 HOH HOH A . G 5 HOH 110 718 112 HOH HOH A . G 5 HOH 111 719 113 HOH HOH A . G 5 HOH 112 720 114 HOH HOH A . G 5 HOH 113 721 115 HOH HOH A . G 5 HOH 114 722 116 HOH HOH A . G 5 HOH 115 723 117 HOH HOH A . G 5 HOH 116 724 118 HOH HOH A . G 5 HOH 117 725 119 HOH HOH A . G 5 HOH 118 726 120 HOH HOH A . G 5 HOH 119 727 121 HOH HOH A . G 5 HOH 120 728 122 HOH HOH A . G 5 HOH 121 729 123 HOH HOH A . G 5 HOH 122 730 124 HOH HOH A . G 5 HOH 123 731 125 HOH HOH A . G 5 HOH 124 732 126 HOH HOH A . G 5 HOH 125 733 127 HOH HOH A . G 5 HOH 126 734 128 HOH HOH A . G 5 HOH 127 735 129 HOH HOH A . G 5 HOH 128 736 130 HOH HOH A . G 5 HOH 129 737 131 HOH HOH A . G 5 HOH 130 738 132 HOH HOH A . G 5 HOH 131 739 133 HOH HOH A . G 5 HOH 132 740 134 HOH HOH A . G 5 HOH 133 741 135 HOH HOH A . G 5 HOH 134 742 136 HOH HOH A . G 5 HOH 135 743 137 HOH HOH A . G 5 HOH 136 744 138 HOH HOH A . G 5 HOH 137 745 140 HOH HOH A . G 5 HOH 138 746 141 HOH HOH A . G 5 HOH 139 747 142 HOH HOH A . G 5 HOH 140 748 143 HOH HOH A . G 5 HOH 141 749 144 HOH HOH A . G 5 HOH 142 750 145 HOH HOH A . G 5 HOH 143 751 146 HOH HOH A . G 5 HOH 144 752 147 HOH HOH A . G 5 HOH 145 753 148 HOH HOH A . G 5 HOH 146 754 149 HOH HOH A . G 5 HOH 147 755 150 HOH HOH A . G 5 HOH 148 756 151 HOH HOH A . G 5 HOH 149 757 152 HOH HOH A . G 5 HOH 150 758 154 HOH HOH A . G 5 HOH 151 759 155 HOH HOH A . G 5 HOH 152 760 156 HOH HOH A . G 5 HOH 153 761 157 HOH HOH A . G 5 HOH 154 762 158 HOH HOH A . G 5 HOH 155 763 159 HOH HOH A . G 5 HOH 156 764 160 HOH HOH A . G 5 HOH 157 765 161 HOH HOH A . G 5 HOH 158 766 162 HOH HOH A . G 5 HOH 159 767 163 HOH HOH A . G 5 HOH 160 768 164 HOH HOH A . G 5 HOH 161 769 165 HOH HOH A . G 5 HOH 162 770 166 HOH HOH A . G 5 HOH 163 771 167 HOH HOH A . G 5 HOH 164 772 168 HOH HOH A . G 5 HOH 165 773 169 HOH HOH A . G 5 HOH 166 774 170 HOH HOH A . G 5 HOH 167 775 171 HOH HOH A . G 5 HOH 168 776 172 HOH HOH A . G 5 HOH 169 777 173 HOH HOH A . G 5 HOH 170 778 174 HOH HOH A . G 5 HOH 171 779 175 HOH HOH A . G 5 HOH 172 780 176 HOH HOH A . G 5 HOH 173 781 177 HOH HOH A . G 5 HOH 174 782 178 HOH HOH A . G 5 HOH 175 783 179 HOH HOH A . G 5 HOH 176 784 180 HOH HOH A . G 5 HOH 177 785 181 HOH HOH A . G 5 HOH 178 786 182 HOH HOH A . G 5 HOH 179 787 183 HOH HOH A . G 5 HOH 180 788 184 HOH HOH A . G 5 HOH 181 789 185 HOH HOH A . G 5 HOH 182 790 186 HOH HOH A . G 5 HOH 183 791 187 HOH HOH A . G 5 HOH 184 792 188 HOH HOH A . G 5 HOH 185 793 189 HOH HOH A . G 5 HOH 186 794 190 HOH HOH A . G 5 HOH 187 795 191 HOH HOH A . G 5 HOH 188 796 192 HOH HOH A . G 5 HOH 189 797 193 HOH HOH A . G 5 HOH 190 798 194 HOH HOH A . G 5 HOH 191 799 195 HOH HOH A . G 5 HOH 192 800 197 HOH HOH A . G 5 HOH 193 801 199 HOH HOH A . G 5 HOH 194 802 200 HOH HOH A . G 5 HOH 195 803 201 HOH HOH A . G 5 HOH 196 804 202 HOH HOH A . G 5 HOH 197 805 203 HOH HOH A . G 5 HOH 198 806 204 HOH HOH A . G 5 HOH 199 807 205 HOH HOH A . G 5 HOH 200 808 207 HOH HOH A . G 5 HOH 201 809 208 HOH HOH A . G 5 HOH 202 810 209 HOH HOH A . G 5 HOH 203 811 210 HOH HOH A . G 5 HOH 204 812 211 HOH HOH A . G 5 HOH 205 813 213 HOH HOH A . G 5 HOH 206 814 214 HOH HOH A . G 5 HOH 207 815 215 HOH HOH A . G 5 HOH 208 816 216 HOH HOH A . G 5 HOH 209 817 217 HOH HOH A . G 5 HOH 210 818 218 HOH HOH A . G 5 HOH 211 819 219 HOH HOH A . G 5 HOH 212 820 220 HOH HOH A . G 5 HOH 213 821 221 HOH HOH A . G 5 HOH 214 822 222 HOH HOH A . G 5 HOH 215 823 223 HOH HOH A . G 5 HOH 216 824 224 HOH HOH A . G 5 HOH 217 825 225 HOH HOH A . G 5 HOH 218 826 226 HOH HOH A . G 5 HOH 219 827 227 HOH HOH A . G 5 HOH 220 828 228 HOH HOH A . G 5 HOH 221 829 229 HOH HOH A . G 5 HOH 222 830 230 HOH HOH A . G 5 HOH 223 831 231 HOH HOH A . G 5 HOH 224 832 232 HOH HOH A . G 5 HOH 225 833 233 HOH HOH A . G 5 HOH 226 834 234 HOH HOH A . G 5 HOH 227 835 235 HOH HOH A . G 5 HOH 228 836 236 HOH HOH A . G 5 HOH 229 837 237 HOH HOH A . G 5 HOH 230 838 238 HOH HOH A . G 5 HOH 231 839 240 HOH HOH A . G 5 HOH 232 840 241 HOH HOH A . G 5 HOH 233 841 242 HOH HOH A . G 5 HOH 234 842 243 HOH HOH A . G 5 HOH 235 843 244 HOH HOH A . G 5 HOH 236 844 245 HOH HOH A . G 5 HOH 237 845 246 HOH HOH A . G 5 HOH 238 846 247 HOH HOH A . G 5 HOH 239 847 248 HOH HOH A . G 5 HOH 240 848 249 HOH HOH A . G 5 HOH 241 849 250 HOH HOH A . G 5 HOH 242 850 252 HOH HOH A . G 5 HOH 243 851 254 HOH HOH A . G 5 HOH 244 852 255 HOH HOH A . G 5 HOH 245 853 256 HOH HOH A . G 5 HOH 246 854 257 HOH HOH A . G 5 HOH 247 855 258 HOH HOH A . G 5 HOH 248 856 259 HOH HOH A . G 5 HOH 249 857 260 HOH HOH A . G 5 HOH 250 858 261 HOH HOH A . G 5 HOH 251 859 262 HOH HOH A . G 5 HOH 252 860 263 HOH HOH A . G 5 HOH 253 861 264 HOH HOH A . G 5 HOH 254 862 265 HOH HOH A . G 5 HOH 255 863 266 HOH HOH A . G 5 HOH 256 864 267 HOH HOH A . G 5 HOH 257 865 268 HOH HOH A . G 5 HOH 258 866 269 HOH HOH A . G 5 HOH 259 867 270 HOH HOH A . G 5 HOH 260 868 271 HOH HOH A . G 5 HOH 261 869 272 HOH HOH A . G 5 HOH 262 870 274 HOH HOH A . G 5 HOH 263 871 275 HOH HOH A . G 5 HOH 264 872 276 HOH HOH A . G 5 HOH 265 873 277 HOH HOH A . G 5 HOH 266 874 278 HOH HOH A . G 5 HOH 267 875 279 HOH HOH A . G 5 HOH 268 876 280 HOH HOH A . G 5 HOH 269 877 283 HOH HOH A . G 5 HOH 270 878 284 HOH HOH A . G 5 HOH 271 879 285 HOH HOH A . G 5 HOH 272 880 286 HOH HOH A . G 5 HOH 273 881 287 HOH HOH A . G 5 HOH 274 882 288 HOH HOH A . G 5 HOH 275 883 290 HOH HOH A . G 5 HOH 276 884 291 HOH HOH A . G 5 HOH 277 885 293 HOH HOH A . G 5 HOH 278 886 294 HOH HOH A . G 5 HOH 279 887 295 HOH HOH A . G 5 HOH 280 888 296 HOH HOH A . G 5 HOH 281 889 298 HOH HOH A . G 5 HOH 282 890 299 HOH HOH A . G 5 HOH 283 891 300 HOH HOH A . G 5 HOH 284 892 301 HOH HOH A . G 5 HOH 285 893 303 HOH HOH A . G 5 HOH 286 894 304 HOH HOH A . G 5 HOH 287 895 305 HOH HOH A . G 5 HOH 288 896 306 HOH HOH A . G 5 HOH 289 897 307 HOH HOH A . G 5 HOH 290 898 308 HOH HOH A . G 5 HOH 291 899 309 HOH HOH A . G 5 HOH 292 900 310 HOH HOH A . G 5 HOH 293 901 311 HOH HOH A . G 5 HOH 294 902 314 HOH HOH A . G 5 HOH 295 903 315 HOH HOH A . G 5 HOH 296 904 317 HOH HOH A . G 5 HOH 297 905 320 HOH HOH A . G 5 HOH 298 906 321 HOH HOH A . G 5 HOH 299 907 322 HOH HOH A . G 5 HOH 300 908 323 HOH HOH A . G 5 HOH 301 909 325 HOH HOH A . G 5 HOH 302 910 328 HOH HOH A . G 5 HOH 303 911 330 HOH HOH A . G 5 HOH 304 912 331 HOH HOH A . G 5 HOH 305 913 332 HOH HOH A . G 5 HOH 306 914 334 HOH HOH A . G 5 HOH 307 915 335 HOH HOH A . G 5 HOH 308 916 337 HOH HOH A . G 5 HOH 309 917 339 HOH HOH A . G 5 HOH 310 918 340 HOH HOH A . G 5 HOH 311 919 341 HOH HOH A . G 5 HOH 312 920 343 HOH HOH A . G 5 HOH 313 921 344 HOH HOH A . G 5 HOH 314 922 345 HOH HOH A . G 5 HOH 315 923 346 HOH HOH A . G 5 HOH 316 924 347 HOH HOH A . G 5 HOH 317 925 348 HOH HOH A . G 5 HOH 318 926 349 HOH HOH A . G 5 HOH 319 927 350 HOH HOH A . G 5 HOH 320 928 351 HOH HOH A . G 5 HOH 321 929 352 HOH HOH A . G 5 HOH 322 930 354 HOH HOH A . G 5 HOH 323 931 355 HOH HOH A . G 5 HOH 324 932 358 HOH HOH A . G 5 HOH 325 933 359 HOH HOH A . G 5 HOH 326 934 360 HOH HOH A . G 5 HOH 327 935 364 HOH HOH A . G 5 HOH 328 936 365 HOH HOH A . G 5 HOH 329 937 367 HOH HOH A . G 5 HOH 330 938 369 HOH HOH A . G 5 HOH 331 939 371 HOH HOH A . G 5 HOH 332 940 372 HOH HOH A . G 5 HOH 333 941 373 HOH HOH A . G 5 HOH 334 942 377 HOH HOH A . G 5 HOH 335 943 378 HOH HOH A . G 5 HOH 336 944 379 HOH HOH A . G 5 HOH 337 945 380 HOH HOH A . G 5 HOH 338 946 381 HOH HOH A . G 5 HOH 339 947 382 HOH HOH A . G 5 HOH 340 948 383 HOH HOH A . G 5 HOH 341 949 384 HOH HOH A . G 5 HOH 342 950 385 HOH HOH A . G 5 HOH 343 951 386 HOH HOH A . G 5 HOH 344 952 387 HOH HOH A . G 5 HOH 345 953 388 HOH HOH A . G 5 HOH 346 954 389 HOH HOH A . G 5 HOH 347 955 390 HOH HOH A . G 5 HOH 348 956 391 HOH HOH A . G 5 HOH 349 957 392 HOH HOH A . G 5 HOH 350 958 393 HOH HOH A . # _pdbx_molecule_features.prd_id PRD_900122 _pdbx_molecule_features.name 'Sialyl-Lewis X antigen, alpha anomer' _pdbx_molecule_features.type Oligosaccharide _pdbx_molecule_features.class Antigen _pdbx_molecule_features.details 'oligosaccharide with branches' # _pdbx_molecule.instance_id 1 _pdbx_molecule.prd_id PRD_900122 _pdbx_molecule.asym_id B # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 OE1 ? A GLN 11 ? A GLN 11 ? 1_555 K ? D K . ? A K 606 ? 1_555 O2 ? F CIT . ? A CIT 608 ? 1_555 137.5 ? 2 OE1 ? A GLN 11 ? A GLN 11 ? 1_555 K ? D K . ? A K 606 ? 1_555 O7 ? F CIT . ? A CIT 608 ? 1_555 95.6 ? 3 O2 ? F CIT . ? A CIT 608 ? 1_555 K ? D K . ? A K 606 ? 1_555 O7 ? F CIT . ? A CIT 608 ? 1_555 61.7 ? 4 OE1 ? A GLN 11 ? A GLN 11 ? 1_555 K ? D K . ? A K 606 ? 1_555 O ? G HOH . ? A HOH 854 ? 1_555 85.9 ? 5 O2 ? F CIT . ? A CIT 608 ? 1_555 K ? D K . ? A K 606 ? 1_555 O ? G HOH . ? A HOH 854 ? 1_555 118.0 ? 6 O7 ? F CIT . ? A CIT 608 ? 1_555 K ? D K . ? A K 606 ? 1_555 O ? G HOH . ? A HOH 854 ? 1_555 75.4 ? 7 OE1 ? A GLN 99 ? A GLN 99 ? 1_555 K ? C K . ? A K 605 ? 1_555 O ? A ASN 100 ? A ASN 100 ? 1_555 72.9 ? 8 OE1 ? A GLN 99 ? A GLN 99 ? 1_555 K ? C K . ? A K 605 ? 1_555 O ? G HOH . ? A HOH 664 ? 1_555 89.0 ? 9 O ? A ASN 100 ? A ASN 100 ? 1_555 K ? C K . ? A K 605 ? 1_555 O ? G HOH . ? A HOH 664 ? 1_555 95.0 ? 10 OE1 ? A GLN 99 ? A GLN 99 ? 1_555 K ? C K . ? A K 605 ? 1_555 O ? G HOH . ? A HOH 832 ? 1_555 84.0 ? 11 O ? A ASN 100 ? A ASN 100 ? 1_555 K ? C K . ? A K 605 ? 1_555 O ? G HOH . ? A HOH 832 ? 1_555 156.2 ? 12 O ? G HOH . ? A HOH 664 ? 1_555 K ? C K . ? A K 605 ? 1_555 O ? G HOH . ? A HOH 832 ? 1_555 78.4 ? 13 OE1 ? A GLN 99 ? A GLN 99 ? 1_555 K ? C K . ? A K 605 ? 1_555 O ? G HOH . ? A HOH 944 ? 1_555 94.2 ? 14 O ? A ASN 100 ? A ASN 100 ? 1_555 K ? C K . ? A K 605 ? 1_555 O ? G HOH . ? A HOH 944 ? 1_555 93.1 ? 15 O ? G HOH . ? A HOH 664 ? 1_555 K ? C K . ? A K 605 ? 1_555 O ? G HOH . ? A HOH 944 ? 1_555 171.8 ? 16 O ? G HOH . ? A HOH 832 ? 1_555 K ? C K . ? A K 605 ? 1_555 O ? G HOH . ? A HOH 944 ? 1_555 94.4 ? 17 OG ? A SER 108 ? A SER 108 ? 1_555 K ? E K . ? A K 607 ? 1_555 O ? A GLY 110 ? A GLY 110 ? 1_555 68.3 ? 18 OG ? A SER 108 ? A SER 108 ? 1_555 K ? E K . ? A K 607 ? 1_555 O ? G HOH . ? A HOH 752 ? 1_555 171.9 ? 19 O ? A GLY 110 ? A GLY 110 ? 1_555 K ? E K . ? A K 607 ? 1_555 O ? G HOH . ? A HOH 752 ? 1_555 115.6 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2007-12-18 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 2 0 2020-07-29 4 'Structure model' 2 1 2023-10-25 # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description _pdbx_audit_revision_details.details 1 1 'Structure model' repository 'Initial release' ? ? 2 3 'Structure model' repository Remediation 'Carbohydrate remediation' ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' Advisory 2 2 'Structure model' 'Version format compliance' 3 3 'Structure model' 'Atomic model' 4 3 'Structure model' 'Data collection' 5 3 'Structure model' 'Derived calculations' 6 3 'Structure model' 'Structure summary' 7 4 'Structure model' 'Data collection' 8 4 'Structure model' 'Database references' 9 4 'Structure model' 'Refinement description' 10 4 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' atom_site 2 3 'Structure model' chem_comp 3 3 'Structure model' entity 4 3 'Structure model' entity_name_com 5 3 'Structure model' pdbx_branch_scheme 6 3 'Structure model' pdbx_chem_comp_identifier 7 3 'Structure model' pdbx_entity_branch 8 3 'Structure model' pdbx_entity_branch_descriptor 9 3 'Structure model' pdbx_entity_branch_link 10 3 'Structure model' pdbx_entity_branch_list 11 3 'Structure model' pdbx_entity_nonpoly 12 3 'Structure model' pdbx_molecule_features 13 3 'Structure model' pdbx_nonpoly_scheme 14 3 'Structure model' pdbx_struct_assembly_gen 15 3 'Structure model' pdbx_struct_conn_angle 16 3 'Structure model' struct_asym 17 3 'Structure model' struct_conn 18 3 'Structure model' struct_conn_type 19 3 'Structure model' struct_site 20 3 'Structure model' struct_site_gen 21 4 'Structure model' chem_comp 22 4 'Structure model' chem_comp_atom 23 4 'Structure model' chem_comp_bond 24 4 'Structure model' database_2 25 4 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_atom_site.B_iso_or_equiv' 2 3 'Structure model' '_atom_site.Cartn_x' 3 3 'Structure model' '_atom_site.Cartn_y' 4 3 'Structure model' '_atom_site.Cartn_z' 5 3 'Structure model' '_atom_site.auth_asym_id' 6 3 'Structure model' '_atom_site.auth_atom_id' 7 3 'Structure model' '_atom_site.auth_comp_id' 8 3 'Structure model' '_atom_site.auth_seq_id' 9 3 'Structure model' '_atom_site.label_asym_id' 10 3 'Structure model' '_atom_site.label_atom_id' 11 3 'Structure model' '_atom_site.label_comp_id' 12 3 'Structure model' '_atom_site.label_entity_id' 13 3 'Structure model' '_atom_site.type_symbol' 14 3 'Structure model' '_chem_comp.name' 15 3 'Structure model' '_chem_comp.type' 16 3 'Structure model' '_pdbx_struct_assembly_gen.asym_id_list' 17 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 18 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 19 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 20 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 21 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 22 3 'Structure model' '_pdbx_struct_conn_angle.ptnr2_label_asym_id' 23 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 24 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 25 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 26 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 27 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 28 3 'Structure model' '_pdbx_struct_conn_angle.value' 29 3 'Structure model' '_struct_conn.conn_type_id' 30 3 'Structure model' '_struct_conn.id' 31 3 'Structure model' '_struct_conn.pdbx_dist_value' 32 3 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 33 3 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 34 3 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 35 3 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 36 3 'Structure model' '_struct_conn.ptnr1_label_asym_id' 37 3 'Structure model' '_struct_conn.ptnr1_label_atom_id' 38 3 'Structure model' '_struct_conn.ptnr1_label_comp_id' 39 3 'Structure model' '_struct_conn.ptnr1_label_seq_id' 40 3 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 41 3 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 42 3 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 43 3 'Structure model' '_struct_conn.ptnr2_label_asym_id' 44 3 'Structure model' '_struct_conn.ptnr2_label_atom_id' 45 3 'Structure model' '_struct_conn.ptnr2_label_comp_id' 46 3 'Structure model' '_struct_conn_type.id' 47 4 'Structure model' '_chem_comp.pdbx_synonyms' 48 4 'Structure model' '_database_2.pdbx_DOI' 49 4 'Structure model' '_database_2.pdbx_database_accession' # loop_ _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.pdbx_refine_id 1 ? refined 24.5590 -12.3870 12.7220 -0.1084 -0.1264 -0.1189 0.0151 0.0225 0.0110 0.3970 2.5893 9.9440 0.5387 0.9453 4.6472 0.0183 -0.0290 -0.0231 0.1265 -0.0487 0.0253 0.1386 -0.2377 0.0304 'X-RAY DIFFRACTION' 2 ? refined 35.3210 -3.6170 26.8520 -0.0942 -0.0463 -0.0719 0.0392 -0.0131 -0.0205 2.5606 3.0896 4.5219 0.4967 -0.4872 -0.1027 -0.0212 -0.0578 -0.2418 0.1533 0.0176 -0.2529 0.4456 0.4123 0.0036 'X-RAY DIFFRACTION' 3 ? refined 30.4860 0.5140 24.4060 -0.1311 -0.0999 -0.1321 0.0135 0.0104 -0.0095 2.0545 0.8031 3.7671 0.4226 0.3851 0.4945 0.0398 -0.0758 0.0624 0.1334 0.0332 -0.1640 0.0939 0.2376 -0.0730 'X-RAY DIFFRACTION' 4 ? refined 9.0330 -1.4520 15.7590 -0.0884 -0.0462 -0.1148 -0.0407 0.0266 0.0022 1.3778 0.3747 2.3435 -0.0223 1.4992 0.4921 0.1203 0.0614 -0.0525 0.0565 -0.0315 0.0592 0.1860 -0.1540 -0.0888 'X-RAY DIFFRACTION' 5 ? refined 17.6800 -1.5320 9.4740 -0.1349 -0.1278 -0.1547 -0.0110 0.0192 0.0012 0.5522 0.9504 1.1216 -0.2066 -0.0247 0.2021 0.0107 0.0071 -0.0425 -0.0433 -0.0132 0.0649 0.0508 -0.0694 0.0025 'X-RAY DIFFRACTION' # loop_ _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.selection_details 1 1 A 5 A 5 A 27 A 27 ? 'X-RAY DIFFRACTION' ? 2 2 A 28 A 28 A 52 A 52 ? 'X-RAY DIFFRACTION' ? 3 3 A 53 A 53 A 88 A 88 ? 'X-RAY DIFFRACTION' ? 4 4 A 89 A 89 A 127 A 127 ? 'X-RAY DIFFRACTION' ? 5 5 A 128 A 128 A 196 A 196 ? 'X-RAY DIFFRACTION' ? # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal REFMAC refinement 5.3.0037 ? 1 MOSFLM 'data reduction' . ? 2 SCALA 'data scaling' . ? 3 PHASER phasing . ? 4 # _pdbx_validate_symm_contact.id 1 _pdbx_validate_symm_contact.PDB_model_num 1 _pdbx_validate_symm_contact.auth_atom_id_1 O _pdbx_validate_symm_contact.auth_asym_id_1 A _pdbx_validate_symm_contact.auth_comp_id_1 HOH _pdbx_validate_symm_contact.auth_seq_id_1 872 _pdbx_validate_symm_contact.PDB_ins_code_1 ? _pdbx_validate_symm_contact.label_alt_id_1 ? _pdbx_validate_symm_contact.site_symmetry_1 1_555 _pdbx_validate_symm_contact.auth_atom_id_2 O _pdbx_validate_symm_contact.auth_asym_id_2 A _pdbx_validate_symm_contact.auth_comp_id_2 HOH _pdbx_validate_symm_contact.auth_seq_id_2 937 _pdbx_validate_symm_contact.PDB_ins_code_2 ? _pdbx_validate_symm_contact.label_alt_id_2 ? _pdbx_validate_symm_contact.site_symmetry_2 2_656 _pdbx_validate_symm_contact.dist 2.01 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 GLU A 50 ? ? -141.86 12.17 2 1 LYS A 153 ? ? 50.53 -128.28 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A LYS 52 ? CD ? A LYS 52 CD 2 1 Y 1 A LYS 52 ? CE ? A LYS 52 CE 3 1 Y 1 A LYS 52 ? NZ ? A LYS 52 NZ 4 1 Y 1 A ARG 76 ? CD ? A ARG 76 CD 5 1 Y 1 A ARG 76 ? NE ? A ARG 76 NE 6 1 Y 1 A ARG 76 ? CZ ? A ARG 76 CZ 7 1 Y 1 A ARG 76 ? NH1 ? A ARG 76 NH1 8 1 Y 1 A ARG 76 ? NH2 ? A ARG 76 NH2 9 1 Y 1 A GLN 77 ? CG ? A GLN 77 CG 10 1 Y 1 A GLN 77 ? CD ? A GLN 77 CD 11 1 Y 1 A GLN 77 ? OE1 ? A GLN 77 OE1 12 1 Y 1 A GLN 77 ? NE2 ? A GLN 77 NE2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A SER 1 ? A SER 1 2 1 Y 1 A THR 2 ? A THR 2 3 1 Y 1 A LEU 3 ? A LEU 3 4 1 Y 1 A GLU 4 ? A GLU 4 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CIT C1 C N N 74 CIT O1 O N N 75 CIT O2 O N N 76 CIT C2 C N N 77 CIT C3 C N N 78 CIT O7 O N N 79 CIT C4 C N N 80 CIT C5 C N N 81 CIT O3 O N N 82 CIT O4 O N N 83 CIT C6 C N N 84 CIT O5 O N N 85 CIT O6 O N N 86 CIT HO2 H N N 87 CIT H21 H N N 88 CIT H22 H N N 89 CIT HO7 H N N 90 CIT H41 H N N 91 CIT H42 H N N 92 CIT HO4 H N N 93 CIT HO6 H N N 94 FUC C1 C N R 95 FUC C2 C N S 96 FUC C3 C N R 97 FUC C4 C N S 98 FUC C5 C N S 99 FUC C6 C N N 100 FUC O1 O N N 101 FUC O2 O N N 102 FUC O3 O N N 103 FUC O4 O N N 104 FUC O5 O N N 105 FUC H1 H N N 106 FUC H2 H N N 107 FUC H3 H N N 108 FUC H4 H N N 109 FUC H5 H N N 110 FUC H61 H N N 111 FUC H62 H N N 112 FUC H63 H N N 113 FUC HO1 H N N 114 FUC HO2 H N N 115 FUC HO3 H N N 116 FUC HO4 H N N 117 GAL C1 C N R 118 GAL C2 C N R 119 GAL C3 C N S 120 GAL C4 C N R 121 GAL C5 C N R 122 GAL C6 C N N 123 GAL O1 O N N 124 GAL O2 O N N 125 GAL O3 O N N 126 GAL O4 O N N 127 GAL O5 O N N 128 GAL O6 O N N 129 GAL H1 H N N 130 GAL H2 H N N 131 GAL H3 H N N 132 GAL H4 H N N 133 GAL H5 H N N 134 GAL H61 H N N 135 GAL H62 H N N 136 GAL HO1 H N N 137 GAL HO2 H N N 138 GAL HO3 H N N 139 GAL HO4 H N N 140 GAL HO6 H N N 141 GLN N N N N 142 GLN CA C N S 143 GLN C C N N 144 GLN O O N N 145 GLN CB C N N 146 GLN CG C N N 147 GLN CD C N N 148 GLN OE1 O N N 149 GLN NE2 N N N 150 GLN OXT O N N 151 GLN H H N N 152 GLN H2 H N N 153 GLN HA H N N 154 GLN HB2 H N N 155 GLN HB3 H N N 156 GLN HG2 H N N 157 GLN HG3 H N N 158 GLN HE21 H N N 159 GLN HE22 H N N 160 GLN HXT H N N 161 GLU N N N N 162 GLU CA C N S 163 GLU C C N N 164 GLU O O N N 165 GLU CB C N N 166 GLU CG C N N 167 GLU CD C N N 168 GLU OE1 O N N 169 GLU OE2 O N N 170 GLU OXT O N N 171 GLU H H N N 172 GLU H2 H N N 173 GLU HA H N N 174 GLU HB2 H N N 175 GLU HB3 H N N 176 GLU HG2 H N N 177 GLU HG3 H N N 178 GLU HE2 H N N 179 GLU HXT H N N 180 GLY N N N N 181 GLY CA C N N 182 GLY C C N N 183 GLY O O N N 184 GLY OXT O N N 185 GLY H H N N 186 GLY H2 H N N 187 GLY HA2 H N N 188 GLY HA3 H N N 189 GLY HXT H N N 190 HIS N N N N 191 HIS CA C N S 192 HIS C C N N 193 HIS O O N N 194 HIS CB C N N 195 HIS CG C Y N 196 HIS ND1 N Y N 197 HIS CD2 C Y N 198 HIS CE1 C Y N 199 HIS NE2 N Y N 200 HIS OXT O N N 201 HIS H H N N 202 HIS H2 H N N 203 HIS HA H N N 204 HIS HB2 H N N 205 HIS HB3 H N N 206 HIS HD1 H N N 207 HIS HD2 H N N 208 HIS HE1 H N N 209 HIS HE2 H N N 210 HIS HXT H N N 211 HOH O O N N 212 HOH H1 H N N 213 HOH H2 H N N 214 ILE N N N N 215 ILE CA C N S 216 ILE C C N N 217 ILE O O N N 218 ILE CB C N S 219 ILE CG1 C N N 220 ILE CG2 C N N 221 ILE CD1 C N N 222 ILE OXT O N N 223 ILE H H N N 224 ILE H2 H N N 225 ILE HA H N N 226 ILE HB H N N 227 ILE HG12 H N N 228 ILE HG13 H N N 229 ILE HG21 H N N 230 ILE HG22 H N N 231 ILE HG23 H N N 232 ILE HD11 H N N 233 ILE HD12 H N N 234 ILE HD13 H N N 235 ILE HXT H N N 236 K K K N N 237 LEU N N N N 238 LEU CA C N S 239 LEU C C N N 240 LEU O O N N 241 LEU CB C N N 242 LEU CG C N N 243 LEU CD1 C N N 244 LEU CD2 C N N 245 LEU OXT O N N 246 LEU H H N N 247 LEU H2 H N N 248 LEU HA H N N 249 LEU HB2 H N N 250 LEU HB3 H N N 251 LEU HG H N N 252 LEU HD11 H N N 253 LEU HD12 H N N 254 LEU HD13 H N N 255 LEU HD21 H N N 256 LEU HD22 H N N 257 LEU HD23 H N N 258 LEU HXT H N N 259 LYS N N N N 260 LYS CA C N S 261 LYS C C N N 262 LYS O O N N 263 LYS CB C N N 264 LYS CG C N N 265 LYS CD C N N 266 LYS CE C N N 267 LYS NZ N N N 268 LYS OXT O N N 269 LYS H H N N 270 LYS H2 H N N 271 LYS HA H N N 272 LYS HB2 H N N 273 LYS HB3 H N N 274 LYS HG2 H N N 275 LYS HG3 H N N 276 LYS HD2 H N N 277 LYS HD3 H N N 278 LYS HE2 H N N 279 LYS HE3 H N N 280 LYS HZ1 H N N 281 LYS HZ2 H N N 282 LYS HZ3 H N N 283 LYS HXT H N N 284 MET N N N N 285 MET CA C N S 286 MET C C N N 287 MET O O N N 288 MET CB C N N 289 MET CG C N N 290 MET SD S N N 291 MET CE C N N 292 MET OXT O N N 293 MET H H N N 294 MET H2 H N N 295 MET HA H N N 296 MET HB2 H N N 297 MET HB3 H N N 298 MET HG2 H N N 299 MET HG3 H N N 300 MET HE1 H N N 301 MET HE2 H N N 302 MET HE3 H N N 303 MET HXT H N N 304 NDG C1 C N S 305 NDG C2 C N R 306 NDG C3 C N R 307 NDG C4 C N S 308 NDG C5 C N R 309 NDG C6 C N N 310 NDG C7 C N N 311 NDG C8 C N N 312 NDG O5 O N N 313 NDG O3 O N N 314 NDG O4 O N N 315 NDG O6 O N N 316 NDG O7 O N N 317 NDG N2 N N N 318 NDG O1 O N N 319 NDG H1 H N N 320 NDG H2 H N N 321 NDG H3 H N N 322 NDG H4 H N N 323 NDG H5 H N N 324 NDG H61 H N N 325 NDG H62 H N N 326 NDG H81 H N N 327 NDG H82 H N N 328 NDG H83 H N N 329 NDG HO3 H N N 330 NDG HO4 H N N 331 NDG HO6 H N N 332 NDG HN2 H N N 333 NDG HO1 H N N 334 PHE N N N N 335 PHE CA C N S 336 PHE C C N N 337 PHE O O N N 338 PHE CB C N N 339 PHE CG C Y N 340 PHE CD1 C Y N 341 PHE CD2 C Y N 342 PHE CE1 C Y N 343 PHE CE2 C Y N 344 PHE CZ C Y N 345 PHE OXT O N N 346 PHE H H N N 347 PHE H2 H N N 348 PHE HA H N N 349 PHE HB2 H N N 350 PHE HB3 H N N 351 PHE HD1 H N N 352 PHE HD2 H N N 353 PHE HE1 H N N 354 PHE HE2 H N N 355 PHE HZ H N N 356 PHE HXT H N N 357 PRO N N N N 358 PRO CA C N S 359 PRO C C N N 360 PRO O O N N 361 PRO CB C N N 362 PRO CG C N N 363 PRO CD C N N 364 PRO OXT O N N 365 PRO H H N N 366 PRO HA H N N 367 PRO HB2 H N N 368 PRO HB3 H N N 369 PRO HG2 H N N 370 PRO HG3 H N N 371 PRO HD2 H N N 372 PRO HD3 H N N 373 PRO HXT H N N 374 SER N N N N 375 SER CA C N S 376 SER C C N N 377 SER O O N N 378 SER CB C N N 379 SER OG O N N 380 SER OXT O N N 381 SER H H N N 382 SER H2 H N N 383 SER HA H N N 384 SER HB2 H N N 385 SER HB3 H N N 386 SER HG H N N 387 SER HXT H N N 388 SIA C1 C N N 389 SIA C2 C N R 390 SIA C3 C N N 391 SIA C4 C N S 392 SIA C5 C N R 393 SIA C6 C N R 394 SIA C7 C N R 395 SIA C8 C N R 396 SIA C9 C N N 397 SIA C10 C N N 398 SIA C11 C N N 399 SIA N5 N N N 400 SIA O1A O N N 401 SIA O1B O N N 402 SIA O2 O N N 403 SIA O4 O N N 404 SIA O6 O N N 405 SIA O7 O N N 406 SIA O8 O N N 407 SIA O9 O N N 408 SIA O10 O N N 409 SIA H32 H N N 410 SIA H31 H N N 411 SIA H4 H N N 412 SIA H5 H N N 413 SIA H6 H N N 414 SIA H7 H N N 415 SIA H8 H N N 416 SIA H92 H N N 417 SIA H91 H N N 418 SIA H111 H N N 419 SIA H113 H N N 420 SIA H112 H N N 421 SIA HN5 H N N 422 SIA HO1B H N N 423 SIA HO2 H N N 424 SIA HO4 H N N 425 SIA HO7 H N N 426 SIA HO8 H N N 427 SIA HO9 H N N 428 THR N N N N 429 THR CA C N S 430 THR C C N N 431 THR O O N N 432 THR CB C N R 433 THR OG1 O N N 434 THR CG2 C N N 435 THR OXT O N N 436 THR H H N N 437 THR H2 H N N 438 THR HA H N N 439 THR HB H N N 440 THR HG1 H N N 441 THR HG21 H N N 442 THR HG22 H N N 443 THR HG23 H N N 444 THR HXT H N N 445 TYR N N N N 446 TYR CA C N S 447 TYR C C N N 448 TYR O O N N 449 TYR CB C N N 450 TYR CG C Y N 451 TYR CD1 C Y N 452 TYR CD2 C Y N 453 TYR CE1 C Y N 454 TYR CE2 C Y N 455 TYR CZ C Y N 456 TYR OH O N N 457 TYR OXT O N N 458 TYR H H N N 459 TYR H2 H N N 460 TYR HA H N N 461 TYR HB2 H N N 462 TYR HB3 H N N 463 TYR HD1 H N N 464 TYR HD2 H N N 465 TYR HE1 H N N 466 TYR HE2 H N N 467 TYR HH H N N 468 TYR HXT H N N 469 VAL N N N N 470 VAL CA C N S 471 VAL C C N N 472 VAL O O N N 473 VAL CB C N N 474 VAL CG1 C N N 475 VAL CG2 C N N 476 VAL OXT O N N 477 VAL H H N N 478 VAL H2 H N N 479 VAL HA H N N 480 VAL HB H N N 481 VAL HG11 H N N 482 VAL HG12 H N N 483 VAL HG13 H N N 484 VAL HG21 H N N 485 VAL HG22 H N N 486 VAL HG23 H N N 487 VAL HXT H N N 488 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CIT C1 O1 doub N N 70 CIT C1 O2 sing N N 71 CIT C1 C2 sing N N 72 CIT O2 HO2 sing N N 73 CIT C2 C3 sing N N 74 CIT C2 H21 sing N N 75 CIT C2 H22 sing N N 76 CIT C3 O7 sing N N 77 CIT C3 C4 sing N N 78 CIT C3 C6 sing N N 79 CIT O7 HO7 sing N N 80 CIT C4 C5 sing N N 81 CIT C4 H41 sing N N 82 CIT C4 H42 sing N N 83 CIT C5 O3 doub N N 84 CIT C5 O4 sing N N 85 CIT O4 HO4 sing N N 86 CIT C6 O5 doub N N 87 CIT C6 O6 sing N N 88 CIT O6 HO6 sing N N 89 FUC C1 C2 sing N N 90 FUC C1 O1 sing N N 91 FUC C1 O5 sing N N 92 FUC C1 H1 sing N N 93 FUC C2 C3 sing N N 94 FUC C2 O2 sing N N 95 FUC C2 H2 sing N N 96 FUC C3 C4 sing N N 97 FUC C3 O3 sing N N 98 FUC C3 H3 sing N N 99 FUC C4 C5 sing N N 100 FUC C4 O4 sing N N 101 FUC C4 H4 sing N N 102 FUC C5 C6 sing N N 103 FUC C5 O5 sing N N 104 FUC C5 H5 sing N N 105 FUC C6 H61 sing N N 106 FUC C6 H62 sing N N 107 FUC C6 H63 sing N N 108 FUC O1 HO1 sing N N 109 FUC O2 HO2 sing N N 110 FUC O3 HO3 sing N N 111 FUC O4 HO4 sing N N 112 GAL C1 C2 sing N N 113 GAL C1 O1 sing N N 114 GAL C1 O5 sing N N 115 GAL C1 H1 sing N N 116 GAL C2 C3 sing N N 117 GAL C2 O2 sing N N 118 GAL C2 H2 sing N N 119 GAL C3 C4 sing N N 120 GAL C3 O3 sing N N 121 GAL C3 H3 sing N N 122 GAL C4 C5 sing N N 123 GAL C4 O4 sing N N 124 GAL C4 H4 sing N N 125 GAL C5 C6 sing N N 126 GAL C5 O5 sing N N 127 GAL C5 H5 sing N N 128 GAL C6 O6 sing N N 129 GAL C6 H61 sing N N 130 GAL C6 H62 sing N N 131 GAL O1 HO1 sing N N 132 GAL O2 HO2 sing N N 133 GAL O3 HO3 sing N N 134 GAL O4 HO4 sing N N 135 GAL O6 HO6 sing N N 136 GLN N CA sing N N 137 GLN N H sing N N 138 GLN N H2 sing N N 139 GLN CA C sing N N 140 GLN CA CB sing N N 141 GLN CA HA sing N N 142 GLN C O doub N N 143 GLN C OXT sing N N 144 GLN CB CG sing N N 145 GLN CB HB2 sing N N 146 GLN CB HB3 sing N N 147 GLN CG CD sing N N 148 GLN CG HG2 sing N N 149 GLN CG HG3 sing N N 150 GLN CD OE1 doub N N 151 GLN CD NE2 sing N N 152 GLN NE2 HE21 sing N N 153 GLN NE2 HE22 sing N N 154 GLN OXT HXT sing N N 155 GLU N CA sing N N 156 GLU N H sing N N 157 GLU N H2 sing N N 158 GLU CA C sing N N 159 GLU CA CB sing N N 160 GLU CA HA sing N N 161 GLU C O doub N N 162 GLU C OXT sing N N 163 GLU CB CG sing N N 164 GLU CB HB2 sing N N 165 GLU CB HB3 sing N N 166 GLU CG CD sing N N 167 GLU CG HG2 sing N N 168 GLU CG HG3 sing N N 169 GLU CD OE1 doub N N 170 GLU CD OE2 sing N N 171 GLU OE2 HE2 sing N N 172 GLU OXT HXT sing N N 173 GLY N CA sing N N 174 GLY N H sing N N 175 GLY N H2 sing N N 176 GLY CA C sing N N 177 GLY CA HA2 sing N N 178 GLY CA HA3 sing N N 179 GLY C O doub N N 180 GLY C OXT sing N N 181 GLY OXT HXT sing N N 182 HIS N CA sing N N 183 HIS N H sing N N 184 HIS N H2 sing N N 185 HIS CA C sing N N 186 HIS CA CB sing N N 187 HIS CA HA sing N N 188 HIS C O doub N N 189 HIS C OXT sing N N 190 HIS CB CG sing N N 191 HIS CB HB2 sing N N 192 HIS CB HB3 sing N N 193 HIS CG ND1 sing Y N 194 HIS CG CD2 doub Y N 195 HIS ND1 CE1 doub Y N 196 HIS ND1 HD1 sing N N 197 HIS CD2 NE2 sing Y N 198 HIS CD2 HD2 sing N N 199 HIS CE1 NE2 sing Y N 200 HIS CE1 HE1 sing N N 201 HIS NE2 HE2 sing N N 202 HIS OXT HXT sing N N 203 HOH O H1 sing N N 204 HOH O H2 sing N N 205 ILE N CA sing N N 206 ILE N H sing N N 207 ILE N H2 sing N N 208 ILE CA C sing N N 209 ILE CA CB sing N N 210 ILE CA HA sing N N 211 ILE C O doub N N 212 ILE C OXT sing N N 213 ILE CB CG1 sing N N 214 ILE CB CG2 sing N N 215 ILE CB HB sing N N 216 ILE CG1 CD1 sing N N 217 ILE CG1 HG12 sing N N 218 ILE CG1 HG13 sing N N 219 ILE CG2 HG21 sing N N 220 ILE CG2 HG22 sing N N 221 ILE CG2 HG23 sing N N 222 ILE CD1 HD11 sing N N 223 ILE CD1 HD12 sing N N 224 ILE CD1 HD13 sing N N 225 ILE OXT HXT sing N N 226 LEU N CA sing N N 227 LEU N H sing N N 228 LEU N H2 sing N N 229 LEU CA C sing N N 230 LEU CA CB sing N N 231 LEU CA HA sing N N 232 LEU C O doub N N 233 LEU C OXT sing N N 234 LEU CB CG sing N N 235 LEU CB HB2 sing N N 236 LEU CB HB3 sing N N 237 LEU CG CD1 sing N N 238 LEU CG CD2 sing N N 239 LEU CG HG sing N N 240 LEU CD1 HD11 sing N N 241 LEU CD1 HD12 sing N N 242 LEU CD1 HD13 sing N N 243 LEU CD2 HD21 sing N N 244 LEU CD2 HD22 sing N N 245 LEU CD2 HD23 sing N N 246 LEU OXT HXT sing N N 247 LYS N CA sing N N 248 LYS N H sing N N 249 LYS N H2 sing N N 250 LYS CA C sing N N 251 LYS CA CB sing N N 252 LYS CA HA sing N N 253 LYS C O doub N N 254 LYS C OXT sing N N 255 LYS CB CG sing N N 256 LYS CB HB2 sing N N 257 LYS CB HB3 sing N N 258 LYS CG CD sing N N 259 LYS CG HG2 sing N N 260 LYS CG HG3 sing N N 261 LYS CD CE sing N N 262 LYS CD HD2 sing N N 263 LYS CD HD3 sing N N 264 LYS CE NZ sing N N 265 LYS CE HE2 sing N N 266 LYS CE HE3 sing N N 267 LYS NZ HZ1 sing N N 268 LYS NZ HZ2 sing N N 269 LYS NZ HZ3 sing N N 270 LYS OXT HXT sing N N 271 MET N CA sing N N 272 MET N H sing N N 273 MET N H2 sing N N 274 MET CA C sing N N 275 MET CA CB sing N N 276 MET CA HA sing N N 277 MET C O doub N N 278 MET C OXT sing N N 279 MET CB CG sing N N 280 MET CB HB2 sing N N 281 MET CB HB3 sing N N 282 MET CG SD sing N N 283 MET CG HG2 sing N N 284 MET CG HG3 sing N N 285 MET SD CE sing N N 286 MET CE HE1 sing N N 287 MET CE HE2 sing N N 288 MET CE HE3 sing N N 289 MET OXT HXT sing N N 290 NDG C1 C2 sing N N 291 NDG C1 O5 sing N N 292 NDG C1 O1 sing N N 293 NDG C1 H1 sing N N 294 NDG C2 C3 sing N N 295 NDG C2 N2 sing N N 296 NDG C2 H2 sing N N 297 NDG C3 C4 sing N N 298 NDG C3 O3 sing N N 299 NDG C3 H3 sing N N 300 NDG C4 C5 sing N N 301 NDG C4 O4 sing N N 302 NDG C4 H4 sing N N 303 NDG C5 C6 sing N N 304 NDG C5 O5 sing N N 305 NDG C5 H5 sing N N 306 NDG C6 O6 sing N N 307 NDG C6 H61 sing N N 308 NDG C6 H62 sing N N 309 NDG C7 C8 sing N N 310 NDG C7 O7 doub N N 311 NDG C7 N2 sing N N 312 NDG C8 H81 sing N N 313 NDG C8 H82 sing N N 314 NDG C8 H83 sing N N 315 NDG O3 HO3 sing N N 316 NDG O4 HO4 sing N N 317 NDG O6 HO6 sing N N 318 NDG N2 HN2 sing N N 319 NDG O1 HO1 sing N N 320 PHE N CA sing N N 321 PHE N H sing N N 322 PHE N H2 sing N N 323 PHE CA C sing N N 324 PHE CA CB sing N N 325 PHE CA HA sing N N 326 PHE C O doub N N 327 PHE C OXT sing N N 328 PHE CB CG sing N N 329 PHE CB HB2 sing N N 330 PHE CB HB3 sing N N 331 PHE CG CD1 doub Y N 332 PHE CG CD2 sing Y N 333 PHE CD1 CE1 sing Y N 334 PHE CD1 HD1 sing N N 335 PHE CD2 CE2 doub Y N 336 PHE CD2 HD2 sing N N 337 PHE CE1 CZ doub Y N 338 PHE CE1 HE1 sing N N 339 PHE CE2 CZ sing Y N 340 PHE CE2 HE2 sing N N 341 PHE CZ HZ sing N N 342 PHE OXT HXT sing N N 343 PRO N CA sing N N 344 PRO N CD sing N N 345 PRO N H sing N N 346 PRO CA C sing N N 347 PRO CA CB sing N N 348 PRO CA HA sing N N 349 PRO C O doub N N 350 PRO C OXT sing N N 351 PRO CB CG sing N N 352 PRO CB HB2 sing N N 353 PRO CB HB3 sing N N 354 PRO CG CD sing N N 355 PRO CG HG2 sing N N 356 PRO CG HG3 sing N N 357 PRO CD HD2 sing N N 358 PRO CD HD3 sing N N 359 PRO OXT HXT sing N N 360 SER N CA sing N N 361 SER N H sing N N 362 SER N H2 sing N N 363 SER CA C sing N N 364 SER CA CB sing N N 365 SER CA HA sing N N 366 SER C O doub N N 367 SER C OXT sing N N 368 SER CB OG sing N N 369 SER CB HB2 sing N N 370 SER CB HB3 sing N N 371 SER OG HG sing N N 372 SER OXT HXT sing N N 373 SIA C1 C2 sing N N 374 SIA C1 O1A doub N N 375 SIA C1 O1B sing N N 376 SIA C2 C3 sing N N 377 SIA C2 O2 sing N N 378 SIA C2 O6 sing N N 379 SIA C3 C4 sing N N 380 SIA C3 H32 sing N N 381 SIA C3 H31 sing N N 382 SIA C4 C5 sing N N 383 SIA C4 O4 sing N N 384 SIA C4 H4 sing N N 385 SIA C5 C6 sing N N 386 SIA C5 N5 sing N N 387 SIA C5 H5 sing N N 388 SIA C6 C7 sing N N 389 SIA C6 O6 sing N N 390 SIA C6 H6 sing N N 391 SIA C7 C8 sing N N 392 SIA C7 O7 sing N N 393 SIA C7 H7 sing N N 394 SIA C8 C9 sing N N 395 SIA C8 O8 sing N N 396 SIA C8 H8 sing N N 397 SIA C9 O9 sing N N 398 SIA C9 H92 sing N N 399 SIA C9 H91 sing N N 400 SIA C10 C11 sing N N 401 SIA C10 N5 sing N N 402 SIA C10 O10 doub N N 403 SIA C11 H111 sing N N 404 SIA C11 H113 sing N N 405 SIA C11 H112 sing N N 406 SIA N5 HN5 sing N N 407 SIA O1B HO1B sing N N 408 SIA O2 HO2 sing N N 409 SIA O4 HO4 sing N N 410 SIA O7 HO7 sing N N 411 SIA O8 HO8 sing N N 412 SIA O9 HO9 sing N N 413 THR N CA sing N N 414 THR N H sing N N 415 THR N H2 sing N N 416 THR CA C sing N N 417 THR CA CB sing N N 418 THR CA HA sing N N 419 THR C O doub N N 420 THR C OXT sing N N 421 THR CB OG1 sing N N 422 THR CB CG2 sing N N 423 THR CB HB sing N N 424 THR OG1 HG1 sing N N 425 THR CG2 HG21 sing N N 426 THR CG2 HG22 sing N N 427 THR CG2 HG23 sing N N 428 THR OXT HXT sing N N 429 TYR N CA sing N N 430 TYR N H sing N N 431 TYR N H2 sing N N 432 TYR CA C sing N N 433 TYR CA CB sing N N 434 TYR CA HA sing N N 435 TYR C O doub N N 436 TYR C OXT sing N N 437 TYR CB CG sing N N 438 TYR CB HB2 sing N N 439 TYR CB HB3 sing N N 440 TYR CG CD1 doub Y N 441 TYR CG CD2 sing Y N 442 TYR CD1 CE1 sing Y N 443 TYR CD1 HD1 sing N N 444 TYR CD2 CE2 doub Y N 445 TYR CD2 HD2 sing N N 446 TYR CE1 CZ doub Y N 447 TYR CE1 HE1 sing N N 448 TYR CE2 CZ sing Y N 449 TYR CE2 HE2 sing N N 450 TYR CZ OH sing N N 451 TYR OH HH sing N N 452 TYR OXT HXT sing N N 453 VAL N CA sing N N 454 VAL N H sing N N 455 VAL N H2 sing N N 456 VAL CA C sing N N 457 VAL CA CB sing N N 458 VAL CA HA sing N N 459 VAL C O doub N N 460 VAL C OXT sing N N 461 VAL CB CG1 sing N N 462 VAL CB CG2 sing N N 463 VAL CB HB sing N N 464 VAL CG1 HG11 sing N N 465 VAL CG1 HG12 sing N N 466 VAL CG1 HG13 sing N N 467 VAL CG2 HG21 sing N N 468 VAL CG2 HG22 sing N N 469 VAL CG2 HG23 sing N N 470 VAL OXT HXT sing N N 471 # loop_ _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_mon_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.hetero B 2 NDG 1 B NDG 1 X NAG 603 n B 2 GAL 2 B GAL 2 X GAL 602 n B 2 SIA 3 B SIA 3 X SIA 601 n B 2 FUC 4 B FUC 4 X FUC 604 n # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier FUC 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 LFucpa FUC 'COMMON NAME' GMML 1.0 a-L-fucopyranose FUC 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 a-L-Fucp FUC 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 Fuc GAL 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGalpb GAL 'COMMON NAME' GMML 1.0 b-D-galactopyranose GAL 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-Galp GAL 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 Gal NDG 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGlcpNAca NDG 'COMMON NAME' GMML 1.0 N-acetyl-a-D-glucopyranosamine NDG 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 a-D-GlcpNAc NDG 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 GlcNAc SIA 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DNeup5Aca SIA 'COMMON NAME' GMML 1.0 'N-acetyl-a-D-neuraminic acid' SIA 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 a-D-Neup5Ac SIA 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 Neu5Ac # _pdbx_entity_branch.entity_id 2 _pdbx_entity_branch.type oligosaccharide # loop_ _pdbx_entity_branch_descriptor.ordinal _pdbx_entity_branch_descriptor.entity_id _pdbx_entity_branch_descriptor.descriptor _pdbx_entity_branch_descriptor.type _pdbx_entity_branch_descriptor.program _pdbx_entity_branch_descriptor.program_version 1 2 'DNeup5Aca2-3DGalpb1-4[LFucpa1-3]DGlcpNAca1-ROH' 'Glycam Condensed Sequence' GMML 1.0 2 2 'WURCS=2.0/4,4,3/[a2122h-1a_1-5_2*NCC/3=O][a1221m-1a_1-5][a2112h-1b_1-5][Aad21122h-2a_2-6_5*NCC/3=O]/1-2-3-4/a3-b1_a4-c1_c3-d2' WURCS PDB2Glycan 1.1.0 3 2 '[][a-D-GlcpNAc]{[(3+1)][a-L-Fucp]{}[(4+1)][b-D-Galp]{[(3+2)][a-D-Neup5Ac]{}}}' LINUCS PDB-CARE ? # loop_ _pdbx_entity_branch_link.link_id _pdbx_entity_branch_link.entity_id _pdbx_entity_branch_link.entity_branch_list_num_1 _pdbx_entity_branch_link.comp_id_1 _pdbx_entity_branch_link.atom_id_1 _pdbx_entity_branch_link.leaving_atom_id_1 _pdbx_entity_branch_link.entity_branch_list_num_2 _pdbx_entity_branch_link.comp_id_2 _pdbx_entity_branch_link.atom_id_2 _pdbx_entity_branch_link.leaving_atom_id_2 _pdbx_entity_branch_link.value_order _pdbx_entity_branch_link.details 1 2 2 GAL C1 O1 1 NDG O4 HO4 sing ? 2 2 3 SIA C2 O2 2 GAL O3 HO3 sing ? 3 2 4 FUC C1 O1 1 NDG O3 HO3 sing ? # loop_ _pdbx_entity_branch_list.entity_id _pdbx_entity_branch_list.comp_id _pdbx_entity_branch_list.num _pdbx_entity_branch_list.hetero 2 NDG 1 n 2 GAL 2 n 2 SIA 3 n 2 FUC 4 n # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 3 'POTASSIUM ION' K 4 'CITRIC ACID' CIT 5 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1M4V _pdbx_initial_refinement_model.details 'PDB ENTRY 1M4V' #