data_2RMP # _entry.id 2RMP # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.375 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2RMP pdb_00002rmp 10.2210/pdb2rmp/pdb WWPDB D_1000178571 ? ? # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 2RMP _pdbx_database_status.recvd_initial_deposition_date 1997-05-30 _pdbx_database_status.deposit_site ? _pdbx_database_status.process_site BNL _pdbx_database_status.SG_entry . _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Yang, J.' 1 'Quail, J.W.' 2 # _citation.id primary _citation.title 'Structure of the Rhizomucor miehei aspartic proteinase complexed with the inhibitor pepstatin A at 2.7 A resolution.' _citation.journal_abbrev 'Acta Crystallogr.,Sect.D' _citation.journal_volume 55 _citation.page_first 625 _citation.page_last 630 _citation.year 1999 _citation.journal_id_ASTM ABCRE6 _citation.country DK _citation.journal_id_ISSN 0907-4449 _citation.journal_id_CSD 0766 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 10089458 _citation.pdbx_database_id_DOI 10.1107/S0907444998013961 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Yang, J.' 1 ? primary 'Quail, J.W.' 2 ? # _cell.entry_id 2RMP _cell.length_a 41.520 _cell.length_b 50.820 _cell.length_c 172.710 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 2RMP _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer nat MUCOROPEPSIN 38735.742 1 3.4.23.23 ? ? ? 2 polymer nat PEPSTATIN 685.891 1 ? ? ? 'INHIBITOR PEPSTATIN A IS BOUND TO THE ENZYME' 3 branched man 'beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose' 383.349 1 ? ? ? ? 4 non-polymer man 2-acetamido-2-deoxy-beta-D-glucopyranose 221.208 1 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'MUCOR RENIN, RHIOMUCOR MIEHEI ASPARTIC PROTEINASE' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;AAADGSVDTPGYYDFDLEEYAIPVSIGTPGQDFLLLFDTGSSDTWVPHKGCTKSEGCVGSRFFDPSASSTFKATNYNLNI TYGTGGANGLYFEDSIAIGDITVTKQILAYVDNVRGPTAEQSPNADIFLDGLFGAAYPDNTAMEAEYGSTYNTVHVNLYK QGLISSPLFSVYMNTNSGTGEVVFGGVNNTLLGGDIAYTDVMSRYGGYYFWDAPVTGITVDGSAAVRFSRPQAFTIDTGT NFFIMPSSAASKIVKAALPDATETQQGWVVPCASYQNSKSTISIVMQKSGSSSDTIEISVPVSKMLLPVDQSNETCMFII LPDGGNQYIVGNLFLRFFVNVYDFGNNRIGFAPLASAYENE ; ;AAADGSVDTPGYYDFDLEEYAIPVSIGTPGQDFLLLFDTGSSDTWVPHKGCTKSEGCVGSRFFDPSASSTFKATNYNLNI TYGTGGANGLYFEDSIAIGDITVTKQILAYVDNVRGPTAEQSPNADIFLDGLFGAAYPDNTAMEAEYGSTYNTVHVNLYK QGLISSPLFSVYMNTNSGTGEVVFGGVNNTLLGGDIAYTDVMSRYGGYYFWDAPVTGITVDGSAAVRFSRPQAFTIDTGT NFFIMPSSAASKIVKAALPDATETQQGWVVPCASYQNSKSTISIVMQKSGSSSDTIEISVPVSKMLLPVDQSNETCMFII LPDGGNQYIVGNLFLRFFVNVYDFGNNRIGFAPLASAYENE ; A ? 2 'polypeptide(L)' no yes '(IVA)VV(STA)A(STA)' XVVXAX B ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ALA n 1 2 ALA n 1 3 ALA n 1 4 ASP n 1 5 GLY n 1 6 SER n 1 7 VAL n 1 8 ASP n 1 9 THR n 1 10 PRO n 1 11 GLY n 1 12 TYR n 1 13 TYR n 1 14 ASP n 1 15 PHE n 1 16 ASP n 1 17 LEU n 1 18 GLU n 1 19 GLU n 1 20 TYR n 1 21 ALA n 1 22 ILE n 1 23 PRO n 1 24 VAL n 1 25 SER n 1 26 ILE n 1 27 GLY n 1 28 THR n 1 29 PRO n 1 30 GLY n 1 31 GLN n 1 32 ASP n 1 33 PHE n 1 34 LEU n 1 35 LEU n 1 36 LEU n 1 37 PHE n 1 38 ASP n 1 39 THR n 1 40 GLY n 1 41 SER n 1 42 SER n 1 43 ASP n 1 44 THR n 1 45 TRP n 1 46 VAL n 1 47 PRO n 1 48 HIS n 1 49 LYS n 1 50 GLY n 1 51 CYS n 1 52 THR n 1 53 LYS n 1 54 SER n 1 55 GLU n 1 56 GLY n 1 57 CYS n 1 58 VAL n 1 59 GLY n 1 60 SER n 1 61 ARG n 1 62 PHE n 1 63 PHE n 1 64 ASP n 1 65 PRO n 1 66 SER n 1 67 ALA n 1 68 SER n 1 69 SER n 1 70 THR n 1 71 PHE n 1 72 LYS n 1 73 ALA n 1 74 THR n 1 75 ASN n 1 76 TYR n 1 77 ASN n 1 78 LEU n 1 79 ASN n 1 80 ILE n 1 81 THR n 1 82 TYR n 1 83 GLY n 1 84 THR n 1 85 GLY n 1 86 GLY n 1 87 ALA n 1 88 ASN n 1 89 GLY n 1 90 LEU n 1 91 TYR n 1 92 PHE n 1 93 GLU n 1 94 ASP n 1 95 SER n 1 96 ILE n 1 97 ALA n 1 98 ILE n 1 99 GLY n 1 100 ASP n 1 101 ILE n 1 102 THR n 1 103 VAL n 1 104 THR n 1 105 LYS n 1 106 GLN n 1 107 ILE n 1 108 LEU n 1 109 ALA n 1 110 TYR n 1 111 VAL n 1 112 ASP n 1 113 ASN n 1 114 VAL n 1 115 ARG n 1 116 GLY n 1 117 PRO n 1 118 THR n 1 119 ALA n 1 120 GLU n 1 121 GLN n 1 122 SER n 1 123 PRO n 1 124 ASN n 1 125 ALA n 1 126 ASP n 1 127 ILE n 1 128 PHE n 1 129 LEU n 1 130 ASP n 1 131 GLY n 1 132 LEU n 1 133 PHE n 1 134 GLY n 1 135 ALA n 1 136 ALA n 1 137 TYR n 1 138 PRO n 1 139 ASP n 1 140 ASN n 1 141 THR n 1 142 ALA n 1 143 MET n 1 144 GLU n 1 145 ALA n 1 146 GLU n 1 147 TYR n 1 148 GLY n 1 149 SER n 1 150 THR n 1 151 TYR n 1 152 ASN n 1 153 THR n 1 154 VAL n 1 155 HIS n 1 156 VAL n 1 157 ASN n 1 158 LEU n 1 159 TYR n 1 160 LYS n 1 161 GLN n 1 162 GLY n 1 163 LEU n 1 164 ILE n 1 165 SER n 1 166 SER n 1 167 PRO n 1 168 LEU n 1 169 PHE n 1 170 SER n 1 171 VAL n 1 172 TYR n 1 173 MET n 1 174 ASN n 1 175 THR n 1 176 ASN n 1 177 SER n 1 178 GLY n 1 179 THR n 1 180 GLY n 1 181 GLU n 1 182 VAL n 1 183 VAL n 1 184 PHE n 1 185 GLY n 1 186 GLY n 1 187 VAL n 1 188 ASN n 1 189 ASN n 1 190 THR n 1 191 LEU n 1 192 LEU n 1 193 GLY n 1 194 GLY n 1 195 ASP n 1 196 ILE n 1 197 ALA n 1 198 TYR n 1 199 THR n 1 200 ASP n 1 201 VAL n 1 202 MET n 1 203 SER n 1 204 ARG n 1 205 TYR n 1 206 GLY n 1 207 GLY n 1 208 TYR n 1 209 TYR n 1 210 PHE n 1 211 TRP n 1 212 ASP n 1 213 ALA n 1 214 PRO n 1 215 VAL n 1 216 THR n 1 217 GLY n 1 218 ILE n 1 219 THR n 1 220 VAL n 1 221 ASP n 1 222 GLY n 1 223 SER n 1 224 ALA n 1 225 ALA n 1 226 VAL n 1 227 ARG n 1 228 PHE n 1 229 SER n 1 230 ARG n 1 231 PRO n 1 232 GLN n 1 233 ALA n 1 234 PHE n 1 235 THR n 1 236 ILE n 1 237 ASP n 1 238 THR n 1 239 GLY n 1 240 THR n 1 241 ASN n 1 242 PHE n 1 243 PHE n 1 244 ILE n 1 245 MET n 1 246 PRO n 1 247 SER n 1 248 SER n 1 249 ALA n 1 250 ALA n 1 251 SER n 1 252 LYS n 1 253 ILE n 1 254 VAL n 1 255 LYS n 1 256 ALA n 1 257 ALA n 1 258 LEU n 1 259 PRO n 1 260 ASP n 1 261 ALA n 1 262 THR n 1 263 GLU n 1 264 THR n 1 265 GLN n 1 266 GLN n 1 267 GLY n 1 268 TRP n 1 269 VAL n 1 270 VAL n 1 271 PRO n 1 272 CYS n 1 273 ALA n 1 274 SER n 1 275 TYR n 1 276 GLN n 1 277 ASN n 1 278 SER n 1 279 LYS n 1 280 SER n 1 281 THR n 1 282 ILE n 1 283 SER n 1 284 ILE n 1 285 VAL n 1 286 MET n 1 287 GLN n 1 288 LYS n 1 289 SER n 1 290 GLY n 1 291 SER n 1 292 SER n 1 293 SER n 1 294 ASP n 1 295 THR n 1 296 ILE n 1 297 GLU n 1 298 ILE n 1 299 SER n 1 300 VAL n 1 301 PRO n 1 302 VAL n 1 303 SER n 1 304 LYS n 1 305 MET n 1 306 LEU n 1 307 LEU n 1 308 PRO n 1 309 VAL n 1 310 ASP n 1 311 GLN n 1 312 SER n 1 313 ASN n 1 314 GLU n 1 315 THR n 1 316 CYS n 1 317 MET n 1 318 PHE n 1 319 ILE n 1 320 ILE n 1 321 LEU n 1 322 PRO n 1 323 ASP n 1 324 GLY n 1 325 GLY n 1 326 ASN n 1 327 GLN n 1 328 TYR n 1 329 ILE n 1 330 VAL n 1 331 GLY n 1 332 ASN n 1 333 LEU n 1 334 PHE n 1 335 LEU n 1 336 ARG n 1 337 PHE n 1 338 PHE n 1 339 VAL n 1 340 ASN n 1 341 VAL n 1 342 TYR n 1 343 ASP n 1 344 PHE n 1 345 GLY n 1 346 ASN n 1 347 ASN n 1 348 ARG n 1 349 ILE n 1 350 GLY n 1 351 PHE n 1 352 ALA n 1 353 PRO n 1 354 LEU n 1 355 ALA n 1 356 SER n 1 357 ALA n 1 358 TYR n 1 359 GLU n 1 360 ASN n 1 361 GLU n 2 1 IVA n 2 2 VAL n 2 3 VAL n 2 4 STA n 2 5 ALA n 2 6 STA n # loop_ _entity_src_nat.entity_id _entity_src_nat.pdbx_src_id _entity_src_nat.pdbx_alt_source_flag _entity_src_nat.pdbx_beg_seq_num _entity_src_nat.pdbx_end_seq_num _entity_src_nat.common_name _entity_src_nat.pdbx_organism_scientific _entity_src_nat.pdbx_ncbi_taxonomy_id _entity_src_nat.genus _entity_src_nat.species _entity_src_nat.strain _entity_src_nat.tissue _entity_src_nat.tissue_fraction _entity_src_nat.pdbx_secretion _entity_src_nat.pdbx_fragment _entity_src_nat.pdbx_variant _entity_src_nat.pdbx_cell_line _entity_src_nat.pdbx_atcc _entity_src_nat.pdbx_cellular_location _entity_src_nat.pdbx_organ _entity_src_nat.pdbx_organelle _entity_src_nat.pdbx_cell _entity_src_nat.pdbx_plasmid_name _entity_src_nat.pdbx_plasmid_details _entity_src_nat.details 1 1 sample ? ? 'Mucor miehei' 'Rhizomucor miehei' 4839 Rhizomucor ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 2 1 sample ? ? ? Streptomyces 1883 Streptomyces ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 'STREPTOMYCES (PEPSTATIN A WAS ISOLATED FROM STREPTOMYCES)' # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.entity_id _struct_ref.pdbx_db_accession _struct_ref.pdbx_align_begin _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_db_isoform 1 UNP CARP_RHIMI 1 P00799 1 ;MLFSQITSAILLTAASLSLTTARPVSKQSESKDKLLALPLTSVSRKFSQTKFGQQQLAEKLAGLKPFSEAAADGSVDTPG YYDFDLEEYAIPVSIGTPGQDFLLLFDTGSSDTWVPHKGCTKSEGCVGSRFFDPSASSTFKATNYNLNITYGTGGANGLY FEDSIAIGDITVTKQILAYVDNVRGPTAEQSPNADIFLDGLFGAAYPDNTAMEAEYGSTYNTVHVNLYKQGLISSPLFSV YMNTNSGTGEVVFGGVNNTLLGGDIAYTDVMSRYGGYYFWDAPVTGITVDGSAAVRFSRPQAFTIDTGTNFFIMPSSAAS KIVKAALPDATETQQGWVVPCASYQNSKSTISIVMQKSGSSSDTIEISVPVSKMLLPVDQSNETCMFIILPDGGNQYIVG NLFLRFFVNVYDFGNNRIGFAPLASAYENE ; ? 2 PDB 2RMP 2 2RMP ? ? ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 2RMP A 1 ? 361 ? P00799 70 ? 430 ? 1 361 2 2 2RMP B 1 ? 6 ? 2RMP 700 ? 705 ? 700 705 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 BMA 'D-saccharide, beta linking' . beta-D-mannopyranose 'beta-D-mannose; D-mannose; mannose' 'C6 H12 O6' 180.156 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 IVA non-polymer . 'ISOVALERIC ACID' ? 'C5 H10 O2' 102.132 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 NAG 'D-saccharide, beta linking' . 2-acetamido-2-deoxy-beta-D-glucopyranose ;N-acetyl-beta-D-glucosamine; 2-acetamido-2-deoxy-beta-D-glucose; 2-acetamido-2-deoxy-D-glucose; 2-acetamido-2-deoxy-glucose; N-ACETYL-D-GLUCOSAMINE ; 'C8 H15 N O6' 221.208 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 STA peptide-like . STATINE ? 'C8 H17 N O3' 175.225 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 2RMP _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.31 _exptl_crystal.density_percent_sol 49. _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method ? _exptl_crystal_grow.temp ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 3.6 _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details 'pH 3.6' # _diffrn.id 1 _diffrn.ambient_temp 287 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector DIFFRACTOMETER _diffrn_detector.type 'ENRAF-NONIUS FAST' _diffrn_detector.pdbx_collection_date 1996-11 _diffrn_detector.details MIRROR # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'SINGLE FLAT CRYSTALS' _diffrn_radiation.pdbx_diffrn_protocol ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.15 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'NSLS BEAMLINE X12C' _diffrn_source.pdbx_synchrotron_site NSLS _diffrn_source.pdbx_synchrotron_beamline X12C _diffrn_source.pdbx_wavelength 1.15 _diffrn_source.pdbx_wavelength_list ? # _reflns.entry_id 2RMP _reflns.observed_criterion_sigma_I 0. _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 50.0 _reflns.d_resolution_high 2.70 _reflns.number_obs 9360 _reflns.number_all ? _reflns.percent_possible_obs 84.9 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value 0.092 _reflns.pdbx_netI_over_sigmaI 15. _reflns.B_iso_Wilson_estimate 45.4 _reflns.pdbx_redundancy 4.6 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 2.7 _reflns_shell.d_res_low 2.8 _reflns_shell.percent_possible_all 48. _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value 0.159 _reflns_shell.meanI_over_sigI_obs 2. _reflns_shell.pdbx_redundancy 2. _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 2RMP _refine.ls_number_reflns_obs 8599 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0. _refine.pdbx_data_cutoff_high_absF 1000000. _refine.pdbx_data_cutoff_low_absF 0.001 _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 8.0 _refine.ls_d_res_high 2.7 _refine.ls_percent_reflns_obs 84.5 _refine.ls_R_factor_obs 0.193 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.193 _refine.ls_R_factor_R_free 0.28 _refine.ls_R_factor_R_free_error 0.01 _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.0 _refine.ls_number_reflns_R_free 432 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.B_iso_mean 25.1 _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ? _refine.pdbx_starting_model 'PDB ENTRY 2ASI' _refine.pdbx_method_to_determine_struct 'DIRECT ELECTRON DENSITY DIFFERENCE MAP' _refine.pdbx_isotropic_thermal_model RESTRAINED _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_redundancy_reflns_obs ? _refine.pdbx_overall_phase_error ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 2RMP _refine_analyze.Luzzati_coordinate_error_obs 0.28 _refine_analyze.Luzzati_sigma_a_obs 0.33 _refine_analyze.Luzzati_d_res_low_obs 5.00 _refine_analyze.Luzzati_coordinate_error_free 0.30 _refine_analyze.Luzzati_sigma_a_free 0.39 _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_analyze.pdbx_Luzzati_d_res_high_obs ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2713 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 39 _refine_hist.number_atoms_solvent 0 _refine_hist.number_atoms_total 2752 _refine_hist.d_res_high 2.7 _refine_hist.d_res_low 8.0 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function x_bond_d 0.009 ? ? ? 'X-RAY DIFFRACTION' ? x_bond_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_bond_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg 1.7 ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d 27.2 ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d 1.8 ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_mcbond_it 4.3 ? ? ? 'X-RAY DIFFRACTION' ? x_mcangle_it 6.8 ? ? ? 'X-RAY DIFFRACTION' ? x_scbond_it 5.9 ? ? ? 'X-RAY DIFFRACTION' ? x_scangle_it 8.6 ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 8 _refine_ls_shell.d_res_high 2.70 _refine_ls_shell.d_res_low 2.82 _refine_ls_shell.number_reflns_R_work 516 _refine_ls_shell.R_factor_R_work 0.298 _refine_ls_shell.percent_reflns_obs 43.2 _refine_ls_shell.R_factor_R_free 0.314 _refine_ls_shell.R_factor_R_free_error 0.06 _refine_ls_shell.percent_reflns_R_free 4.6 _refine_ls_shell.number_reflns_R_free 24 _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.number_reflns_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.R_factor_all ? # loop_ _pdbx_xplor_file.serial_no _pdbx_xplor_file.param_file _pdbx_xplor_file.topol_file _pdbx_xplor_file.pdbx_refine_id 1 PARAM.PRO TOPHCSDX.PRO 'X-RAY DIFFRACTION' 2 PARAM3.CHO TOPH3.CHO 'X-RAY DIFFRACTION' 3 ? TOPOLOGY.PEPSTATIN 'X-RAY DIFFRACTION' # _struct.entry_id 2RMP _struct.title 'RMP-pepstatin A complex' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2RMP _struct_keywords.pdbx_keywords 'HYDROLASE/HYDROLASE INHIBITOR' _struct_keywords.text 'ASPARTIC PROTEINASE, PEPSTATIN A, ASPARTYL PROTEASE-PEPTIDE complex, HYDROLASE-HYDROLASE INHIBITOR complex' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 HN1 LYS A 53 ? GLY A 56 ? LYS A 53 GLY A 56 5 ? 4 HELX_P HELX_P2 HN2 PRO A 65 ? ALA A 67 ? PRO A 65 ALA A 67 5 ? 3 HELX_P HELX_P3 HN3 PRO A 117 ? GLU A 120 ? PRO A 117 GLU A 120 1 ? 4 HELX_P HELX_P4 HN4 PRO A 138 ? THR A 141 ? PRO A 138 THR A 141 5 ? 4 HELX_P HELX_P5 HN5 ALA A 142 ? TYR A 147 ? ALA A 142 TYR A 147 1 ? 6 HELX_P HELX_P6 HN6 VAL A 154 ? LYS A 160 ? VAL A 154 LYS A 160 1 ? 7 HELX_P HELX_P7 HC1 ASN A 189 ? LEU A 191 ? ASN A 189 LEU A 191 5 ? 3 HELX_P HELX_P8 HC2 SER A 247 ? ALA A 257 ? SER A 247 ALA A 257 1 ? 11 HELX_P HELX_P9 HC3 SER A 274 ? GLN A 276 ? SER A 274 GLN A 276 5 ? 3 HELX_P HELX_P10 HC4 VAL A 302 ? MET A 305 ? VAL A 302 MET A 305 5 ? 4 HELX_P HELX_P11 HC5 ASN A 332 ? LEU A 335 ? ASN A 332 LEU A 335 1 ? 4 HELX_P HELX_P12 HC6 SER A 356 ? TYR A 358 ? SER A 356 TYR A 358 5 ? 3 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 51 SG ? ? ? 1_555 A CYS 57 SG ? ? A CYS 51 A CYS 57 1_555 ? ? ? ? ? ? ? 2.028 ? ? disulf2 disulf ? ? A CYS 272 SG ? ? ? 1_555 A CYS 316 SG ? ? A CYS 272 A CYS 316 1_555 ? ? ? ? ? ? ? 2.018 ? ? covale1 covale one ? A ASN 79 ND2 ? ? ? 1_555 C NAG . C1 ? ? A ASN 79 C NAG 1 1_555 ? ? ? ? ? ? ? 1.447 ? N-Glycosylation covale2 covale one ? A ASN 188 ND2 ? ? ? 1_555 D NAG . C1 ? ? A ASN 188 A NAG 600 1_555 ? ? ? ? ? ? ? 1.452 ? N-Glycosylation covale3 covale both ? B IVA 1 C ? ? ? 1_555 B VAL 2 N ? ? B IVA 700 B VAL 701 1_555 ? ? ? ? ? ? ? 1.331 ? ? covale4 covale both ? B VAL 3 C ? ? ? 1_555 B STA 4 N ? ? B VAL 702 B STA 703 1_555 ? ? ? ? ? ? ? 1.332 ? ? covale5 covale both ? B STA 4 C ? ? ? 1_555 B ALA 5 N ? ? B STA 703 B ALA 704 1_555 ? ? ? ? ? ? ? 1.328 ? ? covale6 covale both ? B ALA 5 C ? ? ? 1_555 B STA 6 N ? ? B ALA 704 B STA 705 1_555 ? ? ? ? ? ? ? 1.335 ? ? covale7 covale both ? C NAG . O4 ? ? ? 1_555 C BMA . C1 ? ? C NAG 1 C BMA 2 1_555 ? ? ? ? ? ? ? 1.381 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? covale ? ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id THR _struct_mon_prot_cis.label_seq_id 28 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id THR _struct_mon_prot_cis.auth_seq_id 28 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 29 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 29 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle -0.44 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details 1N ? 8 ? 2N ? 3 ? 3N ? 4 ? 1C ? 5 ? 2C ? 4 ? 3C ? 4 ? A ? 6 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense 1N 1 2 ? anti-parallel 1N 2 3 ? anti-parallel 1N 3 4 ? parallel 1N 4 5 ? anti-parallel 1N 5 6 ? parallel 1N 6 7 ? anti-parallel 1N 7 8 ? anti-parallel 2N 1 2 ? anti-parallel 2N 2 3 ? anti-parallel 3N 1 2 ? anti-parallel 3N 2 3 ? anti-parallel 3N 3 4 ? anti-parallel 1C 1 2 ? anti-parallel 1C 2 3 ? parallel 1C 3 4 ? anti-parallel 1C 4 5 ? parallel 2C 1 2 ? anti-parallel 2C 2 3 ? anti-parallel 2C 3 4 ? anti-parallel 3C 1 2 ? anti-parallel 3C 2 3 ? anti-parallel 3C 3 4 ? anti-parallel A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel A 5 6 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id 1N 1 GLY A 11 ? ASP A 14 ? GLY A 11 ASP A 14 1N 2 GLU A 18 ? PRO A 23 ? GLU A 18 PRO A 23 1N 3 LEU A 34 ? ASP A 38 ? LEU A 34 ASP A 38 1N 4 GLY A 131 ? GLY A 134 ? GLY A 131 GLY A 134 1N 5 ASP A 43 ? PRO A 47 ? ASP A 43 PRO A 47 1N 6 GLN A 106 ? VAL A 111 ? GLN A 106 VAL A 111 1N 7 LEU A 90 ? GLU A 93 ? LEU A 90 GLU A 93 1N 8 LYS A 72 ? ALA A 73 ? LYS A 72 ALA A 73 2N 1 ASN A 77 ? THR A 81 ? ASN A 77 THR A 81 2N 2 GLY A 86 ? LEU A 90 ? GLY A 86 LEU A 90 2N 3 ASP A 112 ? ARG A 115 ? ASP A 112 ARG A 115 3N 1 GLN A 31 ? LEU A 36 ? GLN A 31 LEU A 36 3N 2 ILE A 22 ? ILE A 26 ? ILE A 22 ILE A 26 3N 3 SER A 95 ? ILE A 98 ? SER A 95 ILE A 98 3N 4 ILE A 101 ? LYS A 105 ? ILE A 101 LYS A 105 1C 1 ASP A 212 ? VAL A 215 ? ASP A 212 VAL A 215 1C 2 GLN A 232 ? THR A 235 ? GLN A 232 THR A 235 1C 3 ILE A 329 ? VAL A 330 ? ILE A 329 VAL A 330 1C 4 PHE A 243 ? MET A 245 ? PHE A 243 MET A 245 1C 5 ILE A 320 ? PRO A 322 ? ILE A 320 PRO A 322 2C 1 LEU A 307 ? VAL A 309 ? LEU A 307 VAL A 309 2C 2 THR A 315 ? PHE A 318 ? THR A 315 PHE A 318 2C 3 GLY A 267 ? PRO A 271 ? GLY A 267 PRO A 271 2C 4 THR A 262 ? THR A 264 ? THR A 262 THR A 264 3C 1 ALA A 224 ? ARG A 227 ? ALA A 224 ARG A 227 3C 2 THR A 216 ? VAL A 220 ? THR A 216 VAL A 220 3C 3 THR A 281 ? GLN A 287 ? THR A 281 GLN A 287 3C 4 ASP A 294 ? PRO A 301 ? ASP A 294 PRO A 301 A 1 SER A 6 ? PRO A 10 ? SER A 6 PRO A 10 A 2 GLY A 178 ? PHE A 184 ? GLY A 178 PHE A 184 A 3 PHE A 169 ? ASN A 174 ? PHE A 169 ASN A 174 A 4 PHE A 338 ? ASP A 343 ? PHE A 338 ASP A 343 A 5 ARG A 348 ? PRO A 353 ? ARG A 348 PRO A 353 A 6 ALA A 197 ? ASP A 200 ? ALA A 197 ASP A 200 # _database_PDB_matrix.entry_id 2RMP _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 2RMP _atom_sites.fract_transf_matrix[1][1] 0.024085 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.019677 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.005790 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ALA 1 1 ? ? ? A . n A 1 2 ALA 2 2 ? ? ? A . n A 1 3 ALA 3 3 ? ? ? A . n A 1 4 ASP 4 4 4 ASP ASP A . n A 1 5 GLY 5 5 5 GLY GLY A . n A 1 6 SER 6 6 6 SER SER A . n A 1 7 VAL 7 7 7 VAL VAL A . n A 1 8 ASP 8 8 8 ASP ASP A . n A 1 9 THR 9 9 9 THR THR A . n A 1 10 PRO 10 10 10 PRO PRO A . n A 1 11 GLY 11 11 11 GLY GLY A . n A 1 12 TYR 12 12 12 TYR TYR A . n A 1 13 TYR 13 13 13 TYR TYR A . n A 1 14 ASP 14 14 14 ASP ASP A . n A 1 15 PHE 15 15 15 PHE PHE A . n A 1 16 ASP 16 16 16 ASP ASP A . n A 1 17 LEU 17 17 17 LEU LEU A . n A 1 18 GLU 18 18 18 GLU GLU A . n A 1 19 GLU 19 19 19 GLU GLU A . n A 1 20 TYR 20 20 20 TYR TYR A . n A 1 21 ALA 21 21 21 ALA ALA A . n A 1 22 ILE 22 22 22 ILE ILE A . n A 1 23 PRO 23 23 23 PRO PRO A . n A 1 24 VAL 24 24 24 VAL VAL A . n A 1 25 SER 25 25 25 SER SER A . n A 1 26 ILE 26 26 26 ILE ILE A . n A 1 27 GLY 27 27 27 GLY GLY A . n A 1 28 THR 28 28 28 THR THR A . n A 1 29 PRO 29 29 29 PRO PRO A . n A 1 30 GLY 30 30 30 GLY GLY A . n A 1 31 GLN 31 31 31 GLN GLN A . n A 1 32 ASP 32 32 32 ASP ASP A . n A 1 33 PHE 33 33 33 PHE PHE A . n A 1 34 LEU 34 34 34 LEU LEU A . n A 1 35 LEU 35 35 35 LEU LEU A . n A 1 36 LEU 36 36 36 LEU LEU A . n A 1 37 PHE 37 37 37 PHE PHE A . n A 1 38 ASP 38 38 38 ASP ASP A . n A 1 39 THR 39 39 39 THR THR A . n A 1 40 GLY 40 40 40 GLY GLY A . n A 1 41 SER 41 41 41 SER SER A . n A 1 42 SER 42 42 42 SER SER A . n A 1 43 ASP 43 43 43 ASP ASP A . n A 1 44 THR 44 44 44 THR THR A . n A 1 45 TRP 45 45 45 TRP TRP A . n A 1 46 VAL 46 46 46 VAL VAL A . n A 1 47 PRO 47 47 47 PRO PRO A . n A 1 48 HIS 48 48 48 HIS HIS A . n A 1 49 LYS 49 49 49 LYS LYS A . n A 1 50 GLY 50 50 50 GLY GLY A . n A 1 51 CYS 51 51 51 CYS CYS A . n A 1 52 THR 52 52 52 THR THR A . n A 1 53 LYS 53 53 53 LYS LYS A . n A 1 54 SER 54 54 54 SER SER A . n A 1 55 GLU 55 55 55 GLU GLU A . n A 1 56 GLY 56 56 56 GLY GLY A . n A 1 57 CYS 57 57 57 CYS CYS A . n A 1 58 VAL 58 58 58 VAL VAL A . n A 1 59 GLY 59 59 59 GLY GLY A . n A 1 60 SER 60 60 60 SER SER A . n A 1 61 ARG 61 61 61 ARG ARG A . n A 1 62 PHE 62 62 62 PHE PHE A . n A 1 63 PHE 63 63 63 PHE PHE A . n A 1 64 ASP 64 64 64 ASP ASP A . n A 1 65 PRO 65 65 65 PRO PRO A . n A 1 66 SER 66 66 66 SER SER A . n A 1 67 ALA 67 67 67 ALA ALA A . n A 1 68 SER 68 68 68 SER SER A . n A 1 69 SER 69 69 69 SER SER A . n A 1 70 THR 70 70 70 THR THR A . n A 1 71 PHE 71 71 71 PHE PHE A . n A 1 72 LYS 72 72 72 LYS LYS A . n A 1 73 ALA 73 73 73 ALA ALA A . n A 1 74 THR 74 74 74 THR THR A . n A 1 75 ASN 75 75 75 ASN ASN A . n A 1 76 TYR 76 76 76 TYR TYR A . n A 1 77 ASN 77 77 77 ASN ASN A . n A 1 78 LEU 78 78 78 LEU LEU A . n A 1 79 ASN 79 79 79 ASN ASN A . n A 1 80 ILE 80 80 80 ILE ILE A . n A 1 81 THR 81 81 81 THR THR A . n A 1 82 TYR 82 82 82 TYR TYR A . n A 1 83 GLY 83 83 83 GLY GLY A . n A 1 84 THR 84 84 84 THR THR A . n A 1 85 GLY 85 85 85 GLY GLY A . n A 1 86 GLY 86 86 86 GLY GLY A . n A 1 87 ALA 87 87 87 ALA ALA A . n A 1 88 ASN 88 88 88 ASN ASN A . n A 1 89 GLY 89 89 89 GLY GLY A . n A 1 90 LEU 90 90 90 LEU LEU A . n A 1 91 TYR 91 91 91 TYR TYR A . n A 1 92 PHE 92 92 92 PHE PHE A . n A 1 93 GLU 93 93 93 GLU GLU A . n A 1 94 ASP 94 94 94 ASP ASP A . n A 1 95 SER 95 95 95 SER SER A . n A 1 96 ILE 96 96 96 ILE ILE A . n A 1 97 ALA 97 97 97 ALA ALA A . n A 1 98 ILE 98 98 98 ILE ILE A . n A 1 99 GLY 99 99 99 GLY GLY A . n A 1 100 ASP 100 100 100 ASP ASP A . n A 1 101 ILE 101 101 101 ILE ILE A . n A 1 102 THR 102 102 102 THR THR A . n A 1 103 VAL 103 103 103 VAL VAL A . n A 1 104 THR 104 104 104 THR THR A . n A 1 105 LYS 105 105 105 LYS LYS A . n A 1 106 GLN 106 106 106 GLN GLN A . n A 1 107 ILE 107 107 107 ILE ILE A . n A 1 108 LEU 108 108 108 LEU LEU A . n A 1 109 ALA 109 109 109 ALA ALA A . n A 1 110 TYR 110 110 110 TYR TYR A . n A 1 111 VAL 111 111 111 VAL VAL A . n A 1 112 ASP 112 112 112 ASP ASP A . n A 1 113 ASN 113 113 113 ASN ASN A . n A 1 114 VAL 114 114 114 VAL VAL A . n A 1 115 ARG 115 115 115 ARG ARG A . n A 1 116 GLY 116 116 116 GLY GLY A . n A 1 117 PRO 117 117 117 PRO PRO A . n A 1 118 THR 118 118 118 THR THR A . n A 1 119 ALA 119 119 119 ALA ALA A . n A 1 120 GLU 120 120 120 GLU GLU A . n A 1 121 GLN 121 121 121 GLN GLN A . n A 1 122 SER 122 122 122 SER SER A . n A 1 123 PRO 123 123 123 PRO PRO A . n A 1 124 ASN 124 124 124 ASN ASN A . n A 1 125 ALA 125 125 125 ALA ALA A . n A 1 126 ASP 126 126 126 ASP ASP A . n A 1 127 ILE 127 127 127 ILE ILE A . n A 1 128 PHE 128 128 128 PHE PHE A . n A 1 129 LEU 129 129 129 LEU LEU A . n A 1 130 ASP 130 130 130 ASP ASP A . n A 1 131 GLY 131 131 131 GLY GLY A . n A 1 132 LEU 132 132 132 LEU LEU A . n A 1 133 PHE 133 133 133 PHE PHE A . n A 1 134 GLY 134 134 134 GLY GLY A . n A 1 135 ALA 135 135 135 ALA ALA A . n A 1 136 ALA 136 136 136 ALA ALA A . n A 1 137 TYR 137 137 137 TYR TYR A . n A 1 138 PRO 138 138 138 PRO PRO A . n A 1 139 ASP 139 139 139 ASP ASP A . n A 1 140 ASN 140 140 140 ASN ASN A . n A 1 141 THR 141 141 141 THR THR A . n A 1 142 ALA 142 142 142 ALA ALA A . n A 1 143 MET 143 143 143 MET MET A . n A 1 144 GLU 144 144 144 GLU GLU A . n A 1 145 ALA 145 145 145 ALA ALA A . n A 1 146 GLU 146 146 146 GLU GLU A . n A 1 147 TYR 147 147 147 TYR TYR A . n A 1 148 GLY 148 148 148 GLY GLY A . n A 1 149 SER 149 149 149 SER SER A . n A 1 150 THR 150 150 150 THR THR A . n A 1 151 TYR 151 151 151 TYR TYR A . n A 1 152 ASN 152 152 152 ASN ASN A . n A 1 153 THR 153 153 153 THR THR A . n A 1 154 VAL 154 154 154 VAL VAL A . n A 1 155 HIS 155 155 155 HIS HIS A . n A 1 156 VAL 156 156 156 VAL VAL A . n A 1 157 ASN 157 157 157 ASN ASN A . n A 1 158 LEU 158 158 158 LEU LEU A . n A 1 159 TYR 159 159 159 TYR TYR A . n A 1 160 LYS 160 160 160 LYS LYS A . n A 1 161 GLN 161 161 161 GLN GLN A . n A 1 162 GLY 162 162 162 GLY GLY A . n A 1 163 LEU 163 163 163 LEU LEU A . n A 1 164 ILE 164 164 164 ILE ILE A . n A 1 165 SER 165 165 165 SER SER A . n A 1 166 SER 166 166 166 SER SER A . n A 1 167 PRO 167 167 167 PRO PRO A . n A 1 168 LEU 168 168 168 LEU LEU A . n A 1 169 PHE 169 169 169 PHE PHE A . n A 1 170 SER 170 170 170 SER SER A . n A 1 171 VAL 171 171 171 VAL VAL A . n A 1 172 TYR 172 172 172 TYR TYR A . n A 1 173 MET 173 173 173 MET MET A . n A 1 174 ASN 174 174 174 ASN ASN A . n A 1 175 THR 175 175 175 THR THR A . n A 1 176 ASN 176 176 176 ASN ASN A . n A 1 177 SER 177 177 177 SER SER A . n A 1 178 GLY 178 178 178 GLY GLY A . n A 1 179 THR 179 179 179 THR THR A . n A 1 180 GLY 180 180 180 GLY GLY A . n A 1 181 GLU 181 181 181 GLU GLU A . n A 1 182 VAL 182 182 182 VAL VAL A . n A 1 183 VAL 183 183 183 VAL VAL A . n A 1 184 PHE 184 184 184 PHE PHE A . n A 1 185 GLY 185 185 185 GLY GLY A . n A 1 186 GLY 186 186 186 GLY GLY A . n A 1 187 VAL 187 187 187 VAL VAL A . n A 1 188 ASN 188 188 188 ASN ASN A . n A 1 189 ASN 189 189 189 ASN ASN A . n A 1 190 THR 190 190 190 THR THR A . n A 1 191 LEU 191 191 191 LEU LEU A . n A 1 192 LEU 192 192 192 LEU LEU A . n A 1 193 GLY 193 193 193 GLY GLY A . n A 1 194 GLY 194 194 194 GLY GLY A . n A 1 195 ASP 195 195 195 ASP ASP A . n A 1 196 ILE 196 196 196 ILE ILE A . n A 1 197 ALA 197 197 197 ALA ALA A . n A 1 198 TYR 198 198 198 TYR TYR A . n A 1 199 THR 199 199 199 THR THR A . n A 1 200 ASP 200 200 200 ASP ASP A . n A 1 201 VAL 201 201 201 VAL VAL A . n A 1 202 MET 202 202 202 MET MET A . n A 1 203 SER 203 203 203 SER SER A . n A 1 204 ARG 204 204 204 ARG ARG A . n A 1 205 TYR 205 205 205 TYR TYR A . n A 1 206 GLY 206 206 206 GLY GLY A . n A 1 207 GLY 207 207 207 GLY GLY A . n A 1 208 TYR 208 208 208 TYR TYR A . n A 1 209 TYR 209 209 209 TYR TYR A . n A 1 210 PHE 210 210 210 PHE PHE A . n A 1 211 TRP 211 211 211 TRP TRP A . n A 1 212 ASP 212 212 212 ASP ASP A . n A 1 213 ALA 213 213 213 ALA ALA A . n A 1 214 PRO 214 214 214 PRO PRO A . n A 1 215 VAL 215 215 215 VAL VAL A . n A 1 216 THR 216 216 216 THR THR A . n A 1 217 GLY 217 217 217 GLY GLY A . n A 1 218 ILE 218 218 218 ILE ILE A . n A 1 219 THR 219 219 219 THR THR A . n A 1 220 VAL 220 220 220 VAL VAL A . n A 1 221 ASP 221 221 221 ASP ASP A . n A 1 222 GLY 222 222 222 GLY GLY A . n A 1 223 SER 223 223 223 SER SER A . n A 1 224 ALA 224 224 224 ALA ALA A . n A 1 225 ALA 225 225 225 ALA ALA A . n A 1 226 VAL 226 226 226 VAL VAL A . n A 1 227 ARG 227 227 227 ARG ARG A . n A 1 228 PHE 228 228 228 PHE PHE A . n A 1 229 SER 229 229 229 SER SER A . n A 1 230 ARG 230 230 230 ARG ARG A . n A 1 231 PRO 231 231 231 PRO PRO A . n A 1 232 GLN 232 232 232 GLN GLN A . n A 1 233 ALA 233 233 233 ALA ALA A . n A 1 234 PHE 234 234 234 PHE PHE A . n A 1 235 THR 235 235 235 THR THR A . n A 1 236 ILE 236 236 236 ILE ILE A . n A 1 237 ASP 237 237 237 ASP ASP A . n A 1 238 THR 238 238 238 THR THR A . n A 1 239 GLY 239 239 239 GLY GLY A . n A 1 240 THR 240 240 240 THR THR A . n A 1 241 ASN 241 241 241 ASN ASN A . n A 1 242 PHE 242 242 242 PHE PHE A . n A 1 243 PHE 243 243 243 PHE PHE A . n A 1 244 ILE 244 244 244 ILE ILE A . n A 1 245 MET 245 245 245 MET MET A . n A 1 246 PRO 246 246 246 PRO PRO A . n A 1 247 SER 247 247 247 SER SER A . n A 1 248 SER 248 248 248 SER SER A . n A 1 249 ALA 249 249 249 ALA ALA A . n A 1 250 ALA 250 250 250 ALA ALA A . n A 1 251 SER 251 251 251 SER SER A . n A 1 252 LYS 252 252 252 LYS LYS A . n A 1 253 ILE 253 253 253 ILE ILE A . n A 1 254 VAL 254 254 254 VAL VAL A . n A 1 255 LYS 255 255 255 LYS LYS A . n A 1 256 ALA 256 256 256 ALA ALA A . n A 1 257 ALA 257 257 257 ALA ALA A . n A 1 258 LEU 258 258 258 LEU LEU A . n A 1 259 PRO 259 259 259 PRO PRO A . n A 1 260 ASP 260 260 260 ASP ASP A . n A 1 261 ALA 261 261 261 ALA ALA A . n A 1 262 THR 262 262 262 THR THR A . n A 1 263 GLU 263 263 263 GLU GLU A . n A 1 264 THR 264 264 264 THR THR A . n A 1 265 GLN 265 265 265 GLN GLN A . n A 1 266 GLN 266 266 266 GLN GLN A . n A 1 267 GLY 267 267 267 GLY GLY A . n A 1 268 TRP 268 268 268 TRP TRP A . n A 1 269 VAL 269 269 269 VAL VAL A . n A 1 270 VAL 270 270 270 VAL VAL A . n A 1 271 PRO 271 271 271 PRO PRO A . n A 1 272 CYS 272 272 272 CYS CYS A . n A 1 273 ALA 273 273 273 ALA ALA A . n A 1 274 SER 274 274 274 SER SER A . n A 1 275 TYR 275 275 275 TYR TYR A . n A 1 276 GLN 276 276 276 GLN GLN A . n A 1 277 ASN 277 277 277 ASN ASN A . n A 1 278 SER 278 278 278 SER SER A . n A 1 279 LYS 279 279 279 LYS LYS A . n A 1 280 SER 280 280 280 SER SER A . n A 1 281 THR 281 281 281 THR THR A . n A 1 282 ILE 282 282 282 ILE ILE A . n A 1 283 SER 283 283 283 SER SER A . n A 1 284 ILE 284 284 284 ILE ILE A . n A 1 285 VAL 285 285 285 VAL VAL A . n A 1 286 MET 286 286 286 MET MET A . n A 1 287 GLN 287 287 287 GLN GLN A . n A 1 288 LYS 288 288 288 LYS LYS A . n A 1 289 SER 289 289 289 SER SER A . n A 1 290 GLY 290 290 290 GLY GLY A . n A 1 291 SER 291 291 291 SER SER A . n A 1 292 SER 292 292 292 SER SER A . n A 1 293 SER 293 293 293 SER SER A . n A 1 294 ASP 294 294 294 ASP ASP A . n A 1 295 THR 295 295 295 THR THR A . n A 1 296 ILE 296 296 296 ILE ILE A . n A 1 297 GLU 297 297 297 GLU GLU A . n A 1 298 ILE 298 298 298 ILE ILE A . n A 1 299 SER 299 299 299 SER SER A . n A 1 300 VAL 300 300 300 VAL VAL A . n A 1 301 PRO 301 301 301 PRO PRO A . n A 1 302 VAL 302 302 302 VAL VAL A . n A 1 303 SER 303 303 303 SER SER A . n A 1 304 LYS 304 304 304 LYS LYS A . n A 1 305 MET 305 305 305 MET MET A . n A 1 306 LEU 306 306 306 LEU LEU A . n A 1 307 LEU 307 307 307 LEU LEU A . n A 1 308 PRO 308 308 308 PRO PRO A . n A 1 309 VAL 309 309 309 VAL VAL A . n A 1 310 ASP 310 310 310 ASP ASP A . n A 1 311 GLN 311 311 311 GLN GLN A . n A 1 312 SER 312 312 312 SER SER A . n A 1 313 ASN 313 313 313 ASN ASN A . n A 1 314 GLU 314 314 314 GLU GLU A . n A 1 315 THR 315 315 315 THR THR A . n A 1 316 CYS 316 316 316 CYS CYS A . n A 1 317 MET 317 317 317 MET MET A . n A 1 318 PHE 318 318 318 PHE PHE A . n A 1 319 ILE 319 319 319 ILE ILE A . n A 1 320 ILE 320 320 320 ILE ILE A . n A 1 321 LEU 321 321 321 LEU LEU A . n A 1 322 PRO 322 322 322 PRO PRO A . n A 1 323 ASP 323 323 323 ASP ASP A . n A 1 324 GLY 324 324 324 GLY GLY A . n A 1 325 GLY 325 325 325 GLY GLY A . n A 1 326 ASN 326 326 326 ASN ASN A . n A 1 327 GLN 327 327 327 GLN GLN A . n A 1 328 TYR 328 328 328 TYR TYR A . n A 1 329 ILE 329 329 329 ILE ILE A . n A 1 330 VAL 330 330 330 VAL VAL A . n A 1 331 GLY 331 331 331 GLY GLY A . n A 1 332 ASN 332 332 332 ASN ASN A . n A 1 333 LEU 333 333 333 LEU LEU A . n A 1 334 PHE 334 334 334 PHE PHE A . n A 1 335 LEU 335 335 335 LEU LEU A . n A 1 336 ARG 336 336 336 ARG ARG A . n A 1 337 PHE 337 337 337 PHE PHE A . n A 1 338 PHE 338 338 338 PHE PHE A . n A 1 339 VAL 339 339 339 VAL VAL A . n A 1 340 ASN 340 340 340 ASN ASN A . n A 1 341 VAL 341 341 341 VAL VAL A . n A 1 342 TYR 342 342 342 TYR TYR A . n A 1 343 ASP 343 343 343 ASP ASP A . n A 1 344 PHE 344 344 344 PHE PHE A . n A 1 345 GLY 345 345 345 GLY GLY A . n A 1 346 ASN 346 346 346 ASN ASN A . n A 1 347 ASN 347 347 347 ASN ASN A . n A 1 348 ARG 348 348 348 ARG ARG A . n A 1 349 ILE 349 349 349 ILE ILE A . n A 1 350 GLY 350 350 350 GLY GLY A . n A 1 351 PHE 351 351 351 PHE PHE A . n A 1 352 ALA 352 352 352 ALA ALA A . n A 1 353 PRO 353 353 353 PRO PRO A . n A 1 354 LEU 354 354 354 LEU LEU A . n A 1 355 ALA 355 355 355 ALA ALA A . n A 1 356 SER 356 356 356 SER SER A . n A 1 357 ALA 357 357 357 ALA ALA A . n A 1 358 TYR 358 358 358 TYR TYR A . n A 1 359 GLU 359 359 359 GLU GLU A . n A 1 360 ASN 360 360 360 ASN ASN A . n A 1 361 GLU 361 361 361 GLU GLU A . n B 2 1 IVA 1 700 700 IVA IVA B . n B 2 2 VAL 2 701 701 VAL VAL B . n B 2 3 VAL 3 702 702 VAL VAL B . n B 2 4 STA 4 703 703 STA STA B . n B 2 5 ALA 5 704 704 ALA ALA B . n B 2 6 STA 6 705 705 STA STA B . n # _pdbx_nonpoly_scheme.asym_id D _pdbx_nonpoly_scheme.entity_id 4 _pdbx_nonpoly_scheme.mon_id NAG _pdbx_nonpoly_scheme.ndb_seq_num 1 _pdbx_nonpoly_scheme.pdb_seq_num 600 _pdbx_nonpoly_scheme.auth_seq_num 600 _pdbx_nonpoly_scheme.pdb_mon_id NAG _pdbx_nonpoly_scheme.auth_mon_id NAG _pdbx_nonpoly_scheme.pdb_strand_id A _pdbx_nonpoly_scheme.pdb_ins_code . # _pdbx_molecule_features.prd_id PRD_000557 _pdbx_molecule_features.name Pepstatin _pdbx_molecule_features.type Oligopeptide _pdbx_molecule_features.class 'Enzyme inhibitor' _pdbx_molecule_features.details ? # _pdbx_molecule.instance_id 1 _pdbx_molecule.prd_id PRD_000557 _pdbx_molecule.asym_id B # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A ASN 188 A ASN 188 ? ASN 'GLYCOSYLATION SITE' 2 A ASN 79 A ASN 79 ? ASN 'GLYCOSYLATION SITE' # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 1970 ? 1 MORE -1 ? 1 'SSA (A^2)' 14300 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 1997-09-17 2 'Structure model' 1 1 2008-03-25 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2013-02-27 5 'Structure model' 1 4 2018-04-18 6 'Structure model' 2 0 2020-07-29 7 'Structure model' 2 1 2023-08-09 # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description _pdbx_audit_revision_details.details 1 1 'Structure model' repository 'Initial release' ? ? 2 6 'Structure model' repository Remediation 'Carbohydrate remediation' ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Atomic model' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Derived calculations' 5 3 'Structure model' 'Non-polymer description' 6 3 'Structure model' 'Structure summary' 7 3 'Structure model' 'Version format compliance' 8 4 'Structure model' Other 9 5 'Structure model' 'Data collection' 10 6 'Structure model' 'Atomic model' 11 6 'Structure model' 'Data collection' 12 6 'Structure model' 'Derived calculations' 13 6 'Structure model' 'Structure summary' 14 7 'Structure model' 'Database references' 15 7 'Structure model' 'Refinement description' 16 7 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 5 'Structure model' diffrn_detector 2 6 'Structure model' atom_site 3 6 'Structure model' chem_comp 4 6 'Structure model' entity 5 6 'Structure model' pdbx_branch_scheme 6 6 'Structure model' pdbx_chem_comp_identifier 7 6 'Structure model' pdbx_entity_branch 8 6 'Structure model' pdbx_entity_branch_descriptor 9 6 'Structure model' pdbx_entity_branch_link 10 6 'Structure model' pdbx_entity_branch_list 11 6 'Structure model' pdbx_entity_nonpoly 12 6 'Structure model' pdbx_nonpoly_scheme 13 6 'Structure model' pdbx_struct_assembly_gen 14 6 'Structure model' struct_asym 15 6 'Structure model' struct_conn 16 6 'Structure model' struct_site 17 6 'Structure model' struct_site_gen 18 7 'Structure model' chem_comp 19 7 'Structure model' database_2 20 7 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 5 'Structure model' '_diffrn_detector.detector' 2 6 'Structure model' '_atom_site.B_iso_or_equiv' 3 6 'Structure model' '_atom_site.Cartn_x' 4 6 'Structure model' '_atom_site.Cartn_y' 5 6 'Structure model' '_atom_site.Cartn_z' 6 6 'Structure model' '_atom_site.auth_asym_id' 7 6 'Structure model' '_atom_site.auth_atom_id' 8 6 'Structure model' '_atom_site.auth_comp_id' 9 6 'Structure model' '_atom_site.auth_seq_id' 10 6 'Structure model' '_atom_site.label_asym_id' 11 6 'Structure model' '_atom_site.label_atom_id' 12 6 'Structure model' '_atom_site.label_comp_id' 13 6 'Structure model' '_atom_site.label_entity_id' 14 6 'Structure model' '_atom_site.type_symbol' 15 6 'Structure model' '_chem_comp.name' 16 6 'Structure model' '_chem_comp.type' 17 6 'Structure model' '_entity.formula_weight' 18 6 'Structure model' '_entity.pdbx_description' 19 6 'Structure model' '_entity.pdbx_number_of_molecules' 20 6 'Structure model' '_entity.type' 21 6 'Structure model' '_pdbx_struct_assembly_gen.asym_id_list' 22 6 'Structure model' '_struct_conn.pdbx_dist_value' 23 6 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 24 6 'Structure model' '_struct_conn.pdbx_role' 25 6 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 26 6 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 27 6 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 28 6 'Structure model' '_struct_conn.ptnr1_label_asym_id' 29 6 'Structure model' '_struct_conn.ptnr1_label_atom_id' 30 6 'Structure model' '_struct_conn.ptnr1_label_comp_id' 31 6 'Structure model' '_struct_conn.ptnr1_label_seq_id' 32 6 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 33 6 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 34 6 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 35 6 'Structure model' '_struct_conn.ptnr2_label_asym_id' 36 6 'Structure model' '_struct_conn.ptnr2_label_atom_id' 37 6 'Structure model' '_struct_conn.ptnr2_label_comp_id' 38 6 'Structure model' '_struct_conn.ptnr2_label_seq_id' 39 7 'Structure model' '_chem_comp.pdbx_synonyms' 40 7 'Structure model' '_database_2.pdbx_DOI' 41 7 'Structure model' '_database_2.pdbx_database_accession' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal DENZO 'data reduction' . ? 1 SCALEPACK 'data scaling' . ? 2 X-PLOR 'model building' 3.8 ? 3 X-PLOR refinement 3.8 ? 4 X-PLOR phasing 3.8 ? 5 # loop_ _pdbx_database_remark.id _pdbx_database_remark.text 650 ; HELIX DETERMINATION METHOD: AUTHOR-DETERMINED ; 700 ; SHEET DETERMINATION METHOD: TAKEN FROM RELEASED PDB ENTRY 2ASI ; # _pdbx_validate_rmsd_angle.id 1 _pdbx_validate_rmsd_angle.PDB_model_num 1 _pdbx_validate_rmsd_angle.auth_atom_id_1 N _pdbx_validate_rmsd_angle.auth_asym_id_1 A _pdbx_validate_rmsd_angle.auth_comp_id_1 ASN _pdbx_validate_rmsd_angle.auth_seq_id_1 277 _pdbx_validate_rmsd_angle.PDB_ins_code_1 ? _pdbx_validate_rmsd_angle.label_alt_id_1 ? _pdbx_validate_rmsd_angle.auth_atom_id_2 CA _pdbx_validate_rmsd_angle.auth_asym_id_2 A _pdbx_validate_rmsd_angle.auth_comp_id_2 ASN _pdbx_validate_rmsd_angle.auth_seq_id_2 277 _pdbx_validate_rmsd_angle.PDB_ins_code_2 ? _pdbx_validate_rmsd_angle.label_alt_id_2 ? _pdbx_validate_rmsd_angle.auth_atom_id_3 C _pdbx_validate_rmsd_angle.auth_asym_id_3 A _pdbx_validate_rmsd_angle.auth_comp_id_3 ASN _pdbx_validate_rmsd_angle.auth_seq_id_3 277 _pdbx_validate_rmsd_angle.PDB_ins_code_3 ? _pdbx_validate_rmsd_angle.label_alt_id_3 ? _pdbx_validate_rmsd_angle.angle_value 94.26 _pdbx_validate_rmsd_angle.angle_target_value 111.00 _pdbx_validate_rmsd_angle.angle_deviation -16.74 _pdbx_validate_rmsd_angle.angle_standard_deviation 2.70 _pdbx_validate_rmsd_angle.linker_flag N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 PHE A 37 ? ? -66.79 98.47 2 1 LYS A 105 ? ? 39.49 47.56 3 1 ASN A 176 ? ? -70.66 -72.75 4 1 TYR A 209 ? ? -132.35 -59.04 5 1 ASP A 221 ? ? -142.28 -22.73 6 1 ALA A 224 ? ? -69.36 87.95 7 1 SER A 229 ? ? -96.46 -75.32 8 1 PRO A 231 ? ? -36.22 119.93 9 1 SER A 247 ? ? 7.92 -57.58 10 1 SER A 248 ? ? -155.27 -39.45 11 1 ALA A 249 ? ? -14.06 -83.59 12 1 LYS A 252 ? ? -80.46 46.40 13 1 LYS A 255 ? ? -69.61 0.45 14 1 SER A 274 ? ? -48.37 174.61 15 1 TYR A 275 ? ? -65.22 18.72 16 1 ASN A 277 ? ? -142.58 33.33 17 1 SER A 292 ? ? -137.43 -46.11 18 1 LYS A 304 ? ? -69.71 9.56 19 1 ASP A 310 ? ? -151.31 -152.48 20 1 ASN A 313 ? ? -74.05 48.75 21 1 PRO A 322 ? ? -69.86 -79.88 22 1 ASP A 323 ? ? -16.83 99.63 23 1 ASN A 326 ? ? 82.29 70.58 24 1 GLN A 327 ? ? 104.20 -154.85 25 1 ARG A 336 ? ? -46.42 -15.64 26 1 SER A 356 ? ? -39.29 -37.58 27 1 ALA B 704 ? ? -69.18 14.20 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A ASP 4 ? CG ? A ASP 4 CG 2 1 Y 1 A ASP 4 ? OD1 ? A ASP 4 OD1 3 1 Y 1 A ASP 4 ? OD2 ? A ASP 4 OD2 4 1 Y 1 A LYS 49 ? CG ? A LYS 49 CG 5 1 Y 1 A LYS 49 ? CD ? A LYS 49 CD 6 1 Y 1 A LYS 49 ? CE ? A LYS 49 CE 7 1 Y 1 A LYS 49 ? NZ ? A LYS 49 NZ 8 1 Y 1 A LYS 53 ? CG ? A LYS 53 CG 9 1 Y 1 A LYS 53 ? CD ? A LYS 53 CD 10 1 Y 1 A LYS 53 ? CE ? A LYS 53 CE 11 1 Y 1 A LYS 53 ? NZ ? A LYS 53 NZ 12 1 Y 1 A THR 84 ? CB ? A THR 84 CB 13 1 Y 1 A THR 84 ? OG1 ? A THR 84 OG1 14 1 Y 1 A THR 84 ? CG2 ? A THR 84 CG2 15 1 Y 1 A GLU 120 ? CG ? A GLU 120 CG 16 1 Y 1 A GLU 120 ? CD ? A GLU 120 CD 17 1 Y 1 A GLU 120 ? OE1 ? A GLU 120 OE1 18 1 Y 1 A GLU 120 ? OE2 ? A GLU 120 OE2 19 1 Y 1 A ASN 124 ? CG ? A ASN 124 CG 20 1 Y 1 A ASN 124 ? OD1 ? A ASN 124 OD1 21 1 Y 1 A ASN 124 ? ND2 ? A ASN 124 ND2 22 1 Y 1 A ARG 204 ? CG ? A ARG 204 CG 23 1 Y 1 A ARG 204 ? CD ? A ARG 204 CD 24 1 Y 1 A ARG 204 ? NE ? A ARG 204 NE 25 1 Y 1 A ARG 204 ? CZ ? A ARG 204 CZ 26 1 Y 1 A ARG 204 ? NH1 ? A ARG 204 NH1 27 1 Y 1 A ARG 204 ? NH2 ? A ARG 204 NH2 28 1 Y 1 A SER 223 ? OG ? A SER 223 OG 29 1 Y 1 A SER 247 ? OG ? A SER 247 OG 30 1 Y 1 A SER 251 ? OG ? A SER 251 OG 31 1 Y 1 A GLU 263 ? CG ? A GLU 263 CG 32 1 Y 1 A GLU 263 ? CD ? A GLU 263 CD 33 1 Y 1 A GLU 263 ? OE1 ? A GLU 263 OE1 34 1 Y 1 A GLU 263 ? OE2 ? A GLU 263 OE2 35 1 Y 1 A GLN 265 ? CG ? A GLN 265 CG 36 1 Y 1 A GLN 265 ? CD ? A GLN 265 CD 37 1 Y 1 A GLN 265 ? OE1 ? A GLN 265 OE1 38 1 Y 1 A GLN 265 ? NE2 ? A GLN 265 NE2 39 1 Y 1 A SER 274 ? OG ? A SER 274 OG 40 1 Y 1 A LYS 279 ? CG ? A LYS 279 CG 41 1 Y 1 A LYS 279 ? CD ? A LYS 279 CD 42 1 Y 1 A LYS 279 ? CE ? A LYS 279 CE 43 1 Y 1 A LYS 279 ? NZ ? A LYS 279 NZ 44 1 Y 1 A SER 291 ? OG ? A SER 291 OG 45 1 Y 1 A VAL 309 ? CG1 ? A VAL 309 CG1 46 1 Y 1 A VAL 309 ? CG2 ? A VAL 309 CG2 47 1 Y 1 A GLN 327 ? CB ? A GLN 327 CB 48 1 Y 1 A GLN 327 ? CG ? A GLN 327 CG 49 1 Y 1 A GLN 327 ? CD ? A GLN 327 CD 50 1 Y 1 A GLN 327 ? OE1 ? A GLN 327 OE1 51 1 Y 1 A GLN 327 ? NE2 ? A GLN 327 NE2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A ALA 1 ? A ALA 1 2 1 Y 1 A ALA 2 ? A ALA 2 3 1 Y 1 A ALA 3 ? A ALA 3 # loop_ _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_mon_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.hetero C 3 NAG 1 C NAG 1 ? NAG 601 n C 3 BMA 2 C BMA 2 ? MAN 602 n # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier BMA 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DManpb BMA 'COMMON NAME' GMML 1.0 b-D-mannopyranose BMA 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-Manp BMA 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 Man NAG 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGlcpNAcb NAG 'COMMON NAME' GMML 1.0 N-acetyl-b-D-glucopyranosamine NAG 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-GlcpNAc NAG 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 GlcNAc # _pdbx_entity_branch.entity_id 3 _pdbx_entity_branch.type oligosaccharide # loop_ _pdbx_entity_branch_descriptor.ordinal _pdbx_entity_branch_descriptor.entity_id _pdbx_entity_branch_descriptor.descriptor _pdbx_entity_branch_descriptor.type _pdbx_entity_branch_descriptor.program _pdbx_entity_branch_descriptor.program_version 1 3 DManpb1-4DGlcpNAcb1- 'Glycam Condensed Sequence' GMML 1.0 2 3 'WURCS=2.0/2,2,1/[a2122h-1b_1-5_2*NCC/3=O][a1122h-1b_1-5]/1-2/a4-b1' WURCS PDB2Glycan 1.1.0 3 3 '[]{[(4+1)][b-D-GlcpNAc]{[(4+1)][b-D-Manp]{}}}' LINUCS PDB-CARE ? # _pdbx_entity_branch_link.link_id 1 _pdbx_entity_branch_link.entity_id 3 _pdbx_entity_branch_link.entity_branch_list_num_1 2 _pdbx_entity_branch_link.comp_id_1 BMA _pdbx_entity_branch_link.atom_id_1 C1 _pdbx_entity_branch_link.leaving_atom_id_1 O1 _pdbx_entity_branch_link.entity_branch_list_num_2 1 _pdbx_entity_branch_link.comp_id_2 NAG _pdbx_entity_branch_link.atom_id_2 O4 _pdbx_entity_branch_link.leaving_atom_id_2 HO4 _pdbx_entity_branch_link.value_order sing _pdbx_entity_branch_link.details ? # loop_ _pdbx_entity_branch_list.entity_id _pdbx_entity_branch_list.comp_id _pdbx_entity_branch_list.num _pdbx_entity_branch_list.hetero 3 NAG 1 n 3 BMA 2 n # _pdbx_entity_nonpoly.entity_id 4 _pdbx_entity_nonpoly.name 2-acetamido-2-deoxy-beta-D-glucopyranose _pdbx_entity_nonpoly.comp_id NAG # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 2ASI _pdbx_initial_refinement_model.details 'PDB ENTRY 2ASI' #