data_2RPB # _entry.id 2RPB # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.356 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2RPB pdb_00002rpb 10.2210/pdb2rpb/pdb RCSB RCSB150121 ? ? WWPDB D_1000150121 ? ? # _pdbx_database_status.deposit_site BMRB _pdbx_database_status.entry_id 2RPB _pdbx_database_status.process_site PDBJ _pdbx_database_status.recvd_initial_deposition_date 2008-05-13 _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code REL _pdbx_database_status.status_code_mr REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Kuwahara, Y.' 1 'Unzai, S.' 2 'Nagata, T.' 3 'Hiroaki, H.' 4 # _citation.id primary _citation.title 'The solution structure of membrane protein' _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Kuwahara, Y.' 1 ? primary 'Unzai, S.' 2 ? primary 'Nagata, T.' 3 ? primary 'Hiroaki, H.' 4 ? # _entity.id 1 _entity.type polymer _entity.src_method man _entity.pdbx_description 'hypothetical membrane protein' _entity.formula_weight 12868.731 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment 'UNP residues 66-174' _entity.details ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GSDHVDLREHVIDVPPQEVICKDNVVVTVDAVVYYQVIDPVKAVYNVSDFLMAIVKLAQTNLRAIIGEMELDETLSGRDI INARLREELDKITDRWGVKITRVEIQRIDPPKD ; _entity_poly.pdbx_seq_one_letter_code_can ;GSDHVDLREHVIDVPPQEVICKDNVVVTVDAVVYYQVIDPVKAVYNVSDFLMAIVKLAQTNLRAIIGEMELDETLSGRDI INARLREELDKITDRWGVKITRVEIQRIDPPKD ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 SER n 1 3 ASP n 1 4 HIS n 1 5 VAL n 1 6 ASP n 1 7 LEU n 1 8 ARG n 1 9 GLU n 1 10 HIS n 1 11 VAL n 1 12 ILE n 1 13 ASP n 1 14 VAL n 1 15 PRO n 1 16 PRO n 1 17 GLN n 1 18 GLU n 1 19 VAL n 1 20 ILE n 1 21 CYS n 1 22 LYS n 1 23 ASP n 1 24 ASN n 1 25 VAL n 1 26 VAL n 1 27 VAL n 1 28 THR n 1 29 VAL n 1 30 ASP n 1 31 ALA n 1 32 VAL n 1 33 VAL n 1 34 TYR n 1 35 TYR n 1 36 GLN n 1 37 VAL n 1 38 ILE n 1 39 ASP n 1 40 PRO n 1 41 VAL n 1 42 LYS n 1 43 ALA n 1 44 VAL n 1 45 TYR n 1 46 ASN n 1 47 VAL n 1 48 SER n 1 49 ASP n 1 50 PHE n 1 51 LEU n 1 52 MET n 1 53 ALA n 1 54 ILE n 1 55 VAL n 1 56 LYS n 1 57 LEU n 1 58 ALA n 1 59 GLN n 1 60 THR n 1 61 ASN n 1 62 LEU n 1 63 ARG n 1 64 ALA n 1 65 ILE n 1 66 ILE n 1 67 GLY n 1 68 GLU n 1 69 MET n 1 70 GLU n 1 71 LEU n 1 72 ASP n 1 73 GLU n 1 74 THR n 1 75 LEU n 1 76 SER n 1 77 GLY n 1 78 ARG n 1 79 ASP n 1 80 ILE n 1 81 ILE n 1 82 ASN n 1 83 ALA n 1 84 ARG n 1 85 LEU n 1 86 ARG n 1 87 GLU n 1 88 GLU n 1 89 LEU n 1 90 ASP n 1 91 LYS n 1 92 ILE n 1 93 THR n 1 94 ASP n 1 95 ARG n 1 96 TRP n 1 97 GLY n 1 98 VAL n 1 99 LYS n 1 100 ILE n 1 101 THR n 1 102 ARG n 1 103 VAL n 1 104 GLU n 1 105 ILE n 1 106 GLN n 1 107 ARG n 1 108 ILE n 1 109 ASP n 1 110 PRO n 1 111 PRO n 1 112 LYS n 1 113 ASP n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene PH0470 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain OT3 _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Pyrococcus horikoshii' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 53953 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21 codonplus(DE3)-RIL' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type vector _entity_src_gen.pdbx_host_org_vector pGEX-4T3 _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code O58205_PYRHO _struct_ref.pdbx_db_accession O58205 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;VDLREHVIDVPPQEVICKDNVVVTVDAVVYYQVIDPVKAVYNVSDFLMAIVKLAQTNLRAIIGEMELDETLSGRDIINAR LREELDKITDRWGVKITRVEIQRIDPPKD ; _struct_ref.pdbx_align_begin 66 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 2RPB _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 5 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 113 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession O58205 _struct_ref_seq.db_align_beg 66 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 174 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 66 _struct_ref_seq.pdbx_auth_seq_align_end 174 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 2RPB GLY A 1 ? UNP O58205 ? ? 'expression tag' 62 1 1 2RPB SER A 2 ? UNP O58205 ? ? 'expression tag' 63 2 1 2RPB ASP A 3 ? UNP O58205 ? ? 'expression tag' 64 3 1 2RPB HIS A 4 ? UNP O58205 ? ? 'expression tag' 65 4 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.solution_id _pdbx_nmr_exptl.type 1 1 1 '2D 1H-15N HSQC' 1 2 1 '3D CBCANH' 1 3 1 '3D CBCA(CO)NH' 1 4 1 '3D HNCO' 1 5 1 '3D HNCA' 1 6 1 '3D HN(CO)CA' 1 7 1 '3D CC(CO)NH' 1 8 1 '3D HCC(CO)NH' 1 9 2 '3D HCCH-TOCSY' 1 10 2 '3D 13C-editted NOESY' 1 11 1 '3D 15N-editted NOESY' # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.ionic_strength 0 _pdbx_nmr_exptl_sample_conditions.pH 7.5 _pdbx_nmr_exptl_sample_conditions.pressure ambient _pdbx_nmr_exptl_sample_conditions.pressure_units ? _pdbx_nmr_exptl_sample_conditions.temperature 303 _pdbx_nmr_exptl_sample_conditions.temperature_units K # loop_ _pdbx_nmr_sample_details.contents _pdbx_nmr_sample_details.solution_id _pdbx_nmr_sample_details.solvent_system '0.7mM [U-100% 13C; U-100% 15N] stomatin archea homolog, 20mM HEPES, 90% H2O/10% D2O' 1 '90% H2O/10% D2O' '0.8mM [U-100% 13C] stomatin archea homolog, 20mM HEPES, 100% D2O' 2 '100% D2O' # loop_ _pdbx_nmr_spectrometer.field_strength _pdbx_nmr_spectrometer.manufacturer _pdbx_nmr_spectrometer.model _pdbx_nmr_spectrometer.spectrometer_id _pdbx_nmr_spectrometer.type 500 Bruker DRX 1 'Bruker DRX' 800 Bruker DRX 2 'Bruker DRX' 900 Varian INOVA 3 'Varian INOVA' # _pdbx_nmr_refine.entry_id 2RPB _pdbx_nmr_refine.method 'distance geometry, torsion angle dynamics, rigid body restrained molecular dynamics' _pdbx_nmr_refine.details ? _pdbx_nmr_refine.software_ordinal 1 # _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.conformer_selection_criteria 'target function' _pdbx_nmr_ensemble.conformers_calculated_total_number 200 _pdbx_nmr_ensemble.conformers_submitted_total_number 20 _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.entry_id 2RPB _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.representative_conformer 9 _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.entry_id 2RPB _pdbx_nmr_representative.selection_criteria 'closest to the average' # loop_ _pdbx_nmr_software.authors _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.ordinal 'Guntert, Mumenthaler and Wuthrich' 'structure solution' CYANA 2.0.17 1 'Guntert, Mumenthaler and Wuthrich' refinement CYANA 2.0.17 2 'Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax' processing NMRPipe 2.3 3 'Koradi, Billeter and Wuthrich' refinement MOLMOL 2K.2 4 'Koradi, Billeter and Wuthrich' 'data analysis' MOLMOL 2K.2 5 Goddard 'chemical shift assignment' Sparky 3.106 6 Goddard refinement Sparky 3.106 7 'Bruker Biospin' collection XwinNMR 3.5 8 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.crystals_number ? _exptl.details ? _exptl.entry_id 2RPB _exptl.method 'SOLUTION NMR' _exptl.method_details ? # _struct.entry_id 2RPB _struct.title 'The solution structure of membrane protein' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2RPB _struct_keywords.pdbx_keywords 'MEMBRANE PROTEIN' _struct_keywords.text 'membrane protein, SPFH domain' # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 SER A 48 ? GLY A 67 ? SER A 109 GLY A 128 1 ? 20 HELX_P HELX_P2 2 ASP A 72 ? GLY A 77 ? ASP A 133 GLY A 138 1 ? 6 HELX_P HELX_P3 3 GLY A 77 ? ASP A 94 ? GLY A 138 ASP A 155 1 ? 18 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 3 ? B ? 3 ? C ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel C 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 HIS A 10 ? ASP A 13 ? HIS A 71 ASP A 74 A 2 ALA A 31 ? VAL A 37 ? ALA A 92 VAL A 98 A 3 VAL A 98 ? LYS A 99 ? VAL A 159 LYS A 160 B 1 HIS A 10 ? ASP A 13 ? HIS A 71 ASP A 74 B 2 ALA A 31 ? VAL A 37 ? ALA A 92 VAL A 98 B 3 VAL A 103 ? ILE A 105 ? VAL A 164 ILE A 166 C 1 GLN A 17 ? ILE A 20 ? GLN A 78 ILE A 81 C 2 VAL A 26 ? VAL A 29 ? VAL A 87 VAL A 90 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N HIS A 10 ? N HIS A 71 O TYR A 35 ? O TYR A 96 A 2 3 N GLN A 36 ? N GLN A 97 O LYS A 99 ? O LYS A 160 B 1 2 N HIS A 10 ? N HIS A 71 O TYR A 35 ? O TYR A 96 B 2 3 N VAL A 32 ? N VAL A 93 O GLU A 104 ? O GLU A 165 C 1 2 N VAL A 19 ? N VAL A 80 O VAL A 27 ? O VAL A 88 # _atom_sites.entry_id 2RPB _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 62 62 GLY GLY A . n A 1 2 SER 2 63 63 SER SER A . n A 1 3 ASP 3 64 64 ASP ASP A . n A 1 4 HIS 4 65 65 HIS HIS A . n A 1 5 VAL 5 66 66 VAL VAL A . n A 1 6 ASP 6 67 67 ASP ASP A . n A 1 7 LEU 7 68 68 LEU LEU A . n A 1 8 ARG 8 69 69 ARG ARG A . n A 1 9 GLU 9 70 70 GLU GLU A . n A 1 10 HIS 10 71 71 HIS HIS A . n A 1 11 VAL 11 72 72 VAL VAL A . n A 1 12 ILE 12 73 73 ILE ILE A . n A 1 13 ASP 13 74 74 ASP ASP A . n A 1 14 VAL 14 75 75 VAL VAL A . n A 1 15 PRO 15 76 76 PRO PRO A . n A 1 16 PRO 16 77 77 PRO PRO A . n A 1 17 GLN 17 78 78 GLN GLN A . n A 1 18 GLU 18 79 79 GLU GLU A . n A 1 19 VAL 19 80 80 VAL VAL A . n A 1 20 ILE 20 81 81 ILE ILE A . n A 1 21 CYS 21 82 82 CYS CYS A . n A 1 22 LYS 22 83 83 LYS LYS A . n A 1 23 ASP 23 84 84 ASP ASP A . n A 1 24 ASN 24 85 85 ASN ASN A . n A 1 25 VAL 25 86 86 VAL VAL A . n A 1 26 VAL 26 87 87 VAL VAL A . n A 1 27 VAL 27 88 88 VAL VAL A . n A 1 28 THR 28 89 89 THR THR A . n A 1 29 VAL 29 90 90 VAL VAL A . n A 1 30 ASP 30 91 91 ASP ASP A . n A 1 31 ALA 31 92 92 ALA ALA A . n A 1 32 VAL 32 93 93 VAL VAL A . n A 1 33 VAL 33 94 94 VAL VAL A . n A 1 34 TYR 34 95 95 TYR TYR A . n A 1 35 TYR 35 96 96 TYR TYR A . n A 1 36 GLN 36 97 97 GLN GLN A . n A 1 37 VAL 37 98 98 VAL VAL A . n A 1 38 ILE 38 99 99 ILE ILE A . n A 1 39 ASP 39 100 100 ASP ASP A . n A 1 40 PRO 40 101 101 PRO PRO A . n A 1 41 VAL 41 102 102 VAL VAL A . n A 1 42 LYS 42 103 103 LYS LYS A . n A 1 43 ALA 43 104 104 ALA ALA A . n A 1 44 VAL 44 105 105 VAL VAL A . n A 1 45 TYR 45 106 106 TYR TYR A . n A 1 46 ASN 46 107 107 ASN ASN A . n A 1 47 VAL 47 108 108 VAL VAL A . n A 1 48 SER 48 109 109 SER SER A . n A 1 49 ASP 49 110 110 ASP ASP A . n A 1 50 PHE 50 111 111 PHE PHE A . n A 1 51 LEU 51 112 112 LEU LEU A . n A 1 52 MET 52 113 113 MET MET A . n A 1 53 ALA 53 114 114 ALA ALA A . n A 1 54 ILE 54 115 115 ILE ILE A . n A 1 55 VAL 55 116 116 VAL VAL A . n A 1 56 LYS 56 117 117 LYS LYS A . n A 1 57 LEU 57 118 118 LEU LEU A . n A 1 58 ALA 58 119 119 ALA ALA A . n A 1 59 GLN 59 120 120 GLN GLN A . n A 1 60 THR 60 121 121 THR THR A . n A 1 61 ASN 61 122 122 ASN ASN A . n A 1 62 LEU 62 123 123 LEU LEU A . n A 1 63 ARG 63 124 124 ARG ARG A . n A 1 64 ALA 64 125 125 ALA ALA A . n A 1 65 ILE 65 126 126 ILE ILE A . n A 1 66 ILE 66 127 127 ILE ILE A . n A 1 67 GLY 67 128 128 GLY GLY A . n A 1 68 GLU 68 129 129 GLU GLU A . n A 1 69 MET 69 130 130 MET MET A . n A 1 70 GLU 70 131 131 GLU GLU A . n A 1 71 LEU 71 132 132 LEU LEU A . n A 1 72 ASP 72 133 133 ASP ASP A . n A 1 73 GLU 73 134 134 GLU GLU A . n A 1 74 THR 74 135 135 THR THR A . n A 1 75 LEU 75 136 136 LEU LEU A . n A 1 76 SER 76 137 137 SER SER A . n A 1 77 GLY 77 138 138 GLY GLY A . n A 1 78 ARG 78 139 139 ARG ARG A . n A 1 79 ASP 79 140 140 ASP ASP A . n A 1 80 ILE 80 141 141 ILE ILE A . n A 1 81 ILE 81 142 142 ILE ILE A . n A 1 82 ASN 82 143 143 ASN ASN A . n A 1 83 ALA 83 144 144 ALA ALA A . n A 1 84 ARG 84 145 145 ARG ARG A . n A 1 85 LEU 85 146 146 LEU LEU A . n A 1 86 ARG 86 147 147 ARG ARG A . n A 1 87 GLU 87 148 148 GLU GLU A . n A 1 88 GLU 88 149 149 GLU GLU A . n A 1 89 LEU 89 150 150 LEU LEU A . n A 1 90 ASP 90 151 151 ASP ASP A . n A 1 91 LYS 91 152 152 LYS LYS A . n A 1 92 ILE 92 153 153 ILE ILE A . n A 1 93 THR 93 154 154 THR THR A . n A 1 94 ASP 94 155 155 ASP ASP A . n A 1 95 ARG 95 156 156 ARG ARG A . n A 1 96 TRP 96 157 157 TRP TRP A . n A 1 97 GLY 97 158 158 GLY GLY A . n A 1 98 VAL 98 159 159 VAL VAL A . n A 1 99 LYS 99 160 160 LYS LYS A . n A 1 100 ILE 100 161 161 ILE ILE A . n A 1 101 THR 101 162 162 THR THR A . n A 1 102 ARG 102 163 163 ARG ARG A . n A 1 103 VAL 103 164 164 VAL VAL A . n A 1 104 GLU 104 165 165 GLU GLU A . n A 1 105 ILE 105 166 166 ILE ILE A . n A 1 106 GLN 106 167 167 GLN GLN A . n A 1 107 ARG 107 168 168 ARG ARG A . n A 1 108 ILE 108 169 169 ILE ILE A . n A 1 109 ASP 109 170 170 ASP ASP A . n A 1 110 PRO 110 171 171 PRO PRO A . n A 1 111 PRO 111 172 172 PRO PRO A . n A 1 112 LYS 112 173 173 LYS LYS A . n A 1 113 ASP 113 174 174 ASP ASP A . n # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2009-05-26 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2022-03-16 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' database_2 2 3 'Structure model' pdbx_nmr_software 3 3 'Structure model' pdbx_struct_assembly 4 3 'Structure model' pdbx_struct_oper_list 5 3 'Structure model' struct_ref_seq_dif # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_database_2.pdbx_DOI' 2 3 'Structure model' '_database_2.pdbx_database_accession' 3 3 'Structure model' '_pdbx_nmr_software.name' 4 3 'Structure model' '_struct_ref_seq_dif.details' # loop_ _pdbx_nmr_exptl_sample.component _pdbx_nmr_exptl_sample.concentration _pdbx_nmr_exptl_sample.concentration_units _pdbx_nmr_exptl_sample.isotopic_labeling _pdbx_nmr_exptl_sample.solution_id 'stomatin archea homolog' 0.7 mM '[U-100% 13C; U-100% 15N]' 1 HEPES 20 mM ? 1 'stomatin archea homolog' 0.8 mM '[U-100% 13C]' 2 HEPES 20 mM ? 2 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 LEU A 68 ? ? -88.78 41.69 2 1 CYS A 82 ? ? -52.08 -175.41 3 1 ASP A 84 ? ? -84.58 35.25 4 1 ASP A 91 ? ? -171.00 137.35 5 1 ALA A 104 ? ? -92.57 42.08 6 1 TYR A 106 ? ? -85.89 31.53 7 1 VAL A 108 ? ? 26.83 43.96 8 1 MET A 130 ? ? -172.94 -176.49 9 1 LEU A 132 ? ? -34.96 -32.31 10 1 GLU A 134 ? ? -49.93 -18.10 11 1 ASP A 155 ? ? -38.61 -34.13 12 2 ASP A 64 ? ? -107.80 -60.05 13 2 LEU A 68 ? ? -95.67 36.24 14 2 CYS A 82 ? ? -54.36 -174.93 15 2 VAL A 105 ? ? -95.82 37.05 16 2 VAL A 108 ? ? 35.28 41.37 17 2 MET A 130 ? ? -170.98 -175.38 18 2 LEU A 132 ? ? -36.53 -29.76 19 2 THR A 135 ? ? -37.74 -34.74 20 2 SER A 137 ? ? -112.80 73.44 21 3 LEU A 68 ? ? -91.98 37.09 22 3 ARG A 69 ? ? -37.90 133.98 23 3 CYS A 82 ? ? -50.37 177.81 24 3 VAL A 98 ? ? -63.04 92.87 25 3 ALA A 104 ? ? -95.07 54.95 26 3 VAL A 108 ? ? 33.64 41.63 27 3 GLN A 120 ? ? -37.53 -34.74 28 3 MET A 130 ? ? -172.28 -177.38 29 3 LEU A 132 ? ? -36.00 -30.49 30 4 ASP A 67 ? ? -85.48 -75.26 31 4 CYS A 82 ? ? -53.42 -175.27 32 4 ALA A 104 ? ? -95.77 43.88 33 4 VAL A 105 ? ? -93.30 40.26 34 4 VAL A 108 ? ? 35.26 31.51 35 4 MET A 130 ? ? -172.47 -176.45 36 4 LEU A 132 ? ? -33.72 -34.08 37 4 ARG A 168 ? ? -45.72 154.02 38 5 CYS A 82 ? ? -55.13 -176.87 39 5 ASP A 84 ? ? -83.75 34.35 40 5 VAL A 98 ? ? -68.46 91.20 41 5 ALA A 104 ? ? -96.84 43.72 42 5 VAL A 105 ? ? -90.42 40.22 43 5 VAL A 108 ? ? 27.72 41.98 44 5 LEU A 112 ? ? -58.94 -70.98 45 5 MET A 130 ? ? -173.21 -174.99 46 5 LEU A 132 ? ? -36.72 -29.44 47 5 SER A 137 ? ? -70.32 -70.30 48 5 ARG A 145 ? ? -53.69 -72.06 49 5 ARG A 168 ? ? -41.68 154.33 50 6 ASP A 67 ? ? -103.24 40.72 51 6 LEU A 68 ? ? 48.29 26.48 52 6 CYS A 82 ? ? -63.27 -178.40 53 6 ASP A 84 ? ? -83.70 32.64 54 6 VAL A 98 ? ? -65.50 91.23 55 6 VAL A 108 ? ? 33.79 40.59 56 6 SER A 109 ? ? -95.11 -60.02 57 6 MET A 130 ? ? -173.70 -175.45 58 6 LEU A 132 ? ? -35.35 -31.52 59 6 ARG A 168 ? ? -47.42 160.41 60 6 LYS A 173 ? ? -47.91 156.13 61 7 ASP A 64 ? ? -44.68 165.03 62 7 ARG A 69 ? ? -37.84 136.50 63 7 CYS A 82 ? ? -51.41 -174.86 64 7 ASP A 84 ? ? -84.44 35.25 65 7 VAL A 98 ? ? -64.97 93.26 66 7 PRO A 101 ? ? -69.71 0.37 67 7 ALA A 104 ? ? -87.11 38.66 68 7 TYR A 106 ? ? -93.02 35.14 69 7 VAL A 108 ? ? 34.63 40.98 70 7 MET A 130 ? ? -173.04 -175.29 71 7 LEU A 132 ? ? -36.17 -29.99 72 7 SER A 137 ? ? -107.54 40.89 73 7 TRP A 157 ? ? -84.48 34.35 74 7 ARG A 168 ? ? -47.99 162.92 75 8 LEU A 68 ? ? 35.38 34.21 76 8 ARG A 69 ? ? -36.14 109.15 77 8 CYS A 82 ? ? -55.35 -174.72 78 8 ASP A 84 ? ? -84.15 32.56 79 8 VAL A 98 ? ? -56.85 92.16 80 8 ALA A 104 ? ? -83.78 34.13 81 8 VAL A 108 ? ? 32.80 36.94 82 8 MET A 130 ? ? -172.19 -175.01 83 8 LEU A 132 ? ? -35.81 -30.63 84 8 ARG A 168 ? ? -42.43 157.40 85 9 CYS A 82 ? ? -51.03 -179.68 86 9 ASP A 91 ? ? -174.93 135.83 87 9 VAL A 98 ? ? -63.97 96.39 88 9 VAL A 105 ? ? -94.75 44.89 89 9 VAL A 108 ? ? 33.26 39.40 90 9 MET A 130 ? ? -172.89 -176.79 91 9 LEU A 132 ? ? -36.61 -29.68 92 9 THR A 135 ? ? -35.05 -34.59 93 9 ARG A 168 ? ? -44.40 156.09 94 10 ASP A 64 ? ? -37.21 151.30 95 10 ARG A 69 ? ? -34.37 142.29 96 10 CYS A 82 ? ? -54.44 -175.73 97 10 ALA A 104 ? ? -99.44 43.98 98 10 VAL A 108 ? ? 35.94 38.90 99 10 MET A 130 ? ? -172.55 -177.85 100 10 LEU A 132 ? ? -34.76 -32.36 101 10 THR A 135 ? ? -33.50 -34.17 102 10 ARG A 145 ? ? -62.63 -74.98 103 10 LEU A 146 ? ? -38.15 -37.56 104 11 ARG A 69 ? ? -40.05 95.26 105 11 CYS A 82 ? ? -51.36 -175.20 106 11 ASP A 84 ? ? -86.94 34.74 107 11 ALA A 104 ? ? -104.47 45.80 108 11 TYR A 106 ? ? -86.49 38.44 109 11 ASN A 107 ? ? 49.20 27.36 110 11 VAL A 108 ? ? 36.09 40.39 111 11 MET A 130 ? ? -172.27 -178.03 112 11 LEU A 132 ? ? -34.42 -35.56 113 12 LEU A 68 ? ? -89.68 45.65 114 12 CYS A 82 ? ? -51.52 175.53 115 12 ASP A 84 ? ? -84.98 30.04 116 12 ALA A 104 ? ? -101.91 43.26 117 12 VAL A 105 ? ? -87.25 33.72 118 12 VAL A 108 ? ? 33.52 35.53 119 12 GLN A 120 ? ? -39.41 -33.49 120 12 MET A 130 ? ? -173.12 -174.99 121 12 LEU A 132 ? ? -33.32 -35.39 122 12 TRP A 157 ? ? -84.16 30.29 123 12 ARG A 168 ? ? -47.52 156.64 124 13 LEU A 68 ? ? -86.04 46.35 125 13 CYS A 82 ? ? -60.20 -175.70 126 13 ASP A 91 ? ? -171.01 134.71 127 13 VAL A 98 ? ? -52.84 91.05 128 13 ALA A 104 ? ? -84.45 41.64 129 13 VAL A 105 ? ? -87.66 47.59 130 13 VAL A 108 ? ? 36.10 35.15 131 13 MET A 130 ? ? -171.80 -177.18 132 13 LEU A 132 ? ? -33.55 -34.88 133 14 ASP A 64 ? ? -88.18 -70.55 134 14 VAL A 66 ? ? -175.07 149.00 135 14 ASP A 67 ? ? -47.31 -75.21 136 14 LEU A 68 ? ? 35.72 34.31 137 14 ARG A 69 ? ? -48.59 174.54 138 14 CYS A 82 ? ? -55.36 -174.92 139 14 ASP A 84 ? ? -82.84 37.37 140 14 VAL A 98 ? ? -67.32 93.87 141 14 ALA A 104 ? ? -88.20 46.37 142 14 VAL A 105 ? ? -89.22 30.00 143 14 VAL A 108 ? ? 31.08 41.15 144 14 MET A 130 ? ? -172.98 -175.89 145 14 LEU A 132 ? ? -34.39 -32.91 146 14 GLU A 149 ? ? -91.17 -62.49 147 15 SER A 63 ? ? -108.90 -60.56 148 15 ASP A 64 ? ? 37.05 39.04 149 15 ARG A 69 ? ? -33.62 125.87 150 15 CYS A 82 ? ? -50.50 -179.84 151 15 ASP A 84 ? ? -84.34 30.63 152 15 ASP A 91 ? ? -174.86 136.46 153 15 ALA A 104 ? ? -91.30 45.88 154 15 VAL A 105 ? ? -90.73 40.45 155 15 VAL A 108 ? ? 34.41 33.39 156 15 MET A 130 ? ? -172.61 -175.19 157 15 LEU A 132 ? ? -33.68 -34.05 158 15 SER A 137 ? ? -93.86 41.50 159 15 ARG A 168 ? ? -43.13 158.14 160 16 LEU A 68 ? ? -81.94 39.61 161 16 CYS A 82 ? ? -51.11 -177.64 162 16 ALA A 104 ? ? -90.92 47.30 163 16 VAL A 108 ? ? 34.14 36.95 164 16 MET A 130 ? ? -173.17 -178.34 165 16 LEU A 132 ? ? -33.73 -34.93 166 16 SER A 137 ? ? -101.54 46.16 167 16 ARG A 168 ? ? -45.03 157.22 168 17 CYS A 82 ? ? -56.44 -177.30 169 17 ASP A 84 ? ? -85.51 34.39 170 17 VAL A 98 ? ? -48.88 90.86 171 17 VAL A 102 ? ? -36.41 -31.79 172 17 ALA A 104 ? ? -82.27 41.73 173 17 VAL A 108 ? ? 32.97 39.71 174 17 MET A 130 ? ? -171.98 -175.72 175 17 LEU A 132 ? ? -37.53 -28.07 176 17 ARG A 145 ? ? -61.23 -70.10 177 18 LEU A 68 ? ? -85.88 39.74 178 18 CYS A 82 ? ? -49.78 -179.84 179 18 ASP A 84 ? ? -84.96 33.35 180 18 VAL A 98 ? ? -53.79 94.95 181 18 ASP A 100 ? ? -165.17 112.64 182 18 ALA A 104 ? ? -96.73 56.01 183 18 VAL A 108 ? ? 36.66 40.70 184 18 MET A 130 ? ? -172.79 -175.13 185 18 LEU A 132 ? ? -38.29 -26.60 186 19 ARG A 69 ? ? -36.58 137.81 187 19 CYS A 82 ? ? -52.33 -178.70 188 19 ASP A 84 ? ? -81.45 37.98 189 19 ALA A 104 ? ? -86.63 47.82 190 19 TYR A 106 ? ? -85.26 30.83 191 19 VAL A 108 ? ? 32.57 41.53 192 19 ASN A 122 ? ? -91.53 -61.56 193 19 MET A 130 ? ? -175.54 -175.04 194 19 THR A 135 ? ? -33.30 -33.92 195 19 TRP A 157 ? ? -88.23 34.85 196 19 ARG A 163 ? ? -170.99 -179.93 197 20 CYS A 82 ? ? -53.11 -174.63 198 20 ASP A 84 ? ? -82.89 36.71 199 20 VAL A 98 ? ? -51.68 95.84 200 20 ASP A 100 ? ? -161.22 109.59 201 20 VAL A 102 ? ? -34.83 -39.51 202 20 ALA A 104 ? ? -94.23 49.83 203 20 VAL A 108 ? ? 33.65 41.58 204 20 MET A 130 ? ? -172.55 -175.09 205 20 LEU A 132 ? ? -33.89 -33.66 206 20 ARG A 147 ? ? -36.19 -36.74 207 20 ARG A 168 ? ? -49.56 160.95 #