data_2RQT # _entry.id 2RQT # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.356 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2RQT pdb_00002rqt 10.2210/pdb2rqt/pdb RCSB RCSB150175 ? ? WWPDB D_1000150175 ? ? # _pdbx_database_related.db_name PDB _pdbx_database_related.db_id 2RQU _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.deposit_site BMRB _pdbx_database_status.entry_id 2RQT _pdbx_database_status.process_site PDBJ _pdbx_database_status.recvd_initial_deposition_date 2009-12-14 _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code REL _pdbx_database_status.status_code_mr REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Kaieda, S.' 1 'Matsui, C.' 2 'Mimori-Kiyosue, Y.' 3 'Ikegami, T.' 4 # _citation.id primary _citation.title 'Structural basis of the recognition of the SAMP motif of adenomatous polyposis coli by the Src-homology 3 domain.' _citation.journal_abbrev Biochemistry _citation.journal_volume 49 _citation.page_first 5143 _citation.page_last 5153 _citation.year 2010 _citation.journal_id_ASTM BICHAW _citation.country US _citation.journal_id_ISSN 0006-2960 _citation.journal_id_CSD 0033 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 20509626 _citation.pdbx_database_id_DOI 10.1021/bi100563z # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Kaieda, S.' 1 ? primary 'Matsui, C.' 2 ? primary 'Mimori-Kiyosue, Y.' 3 ? primary 'Ikegami, T.' 4 ? # _entity.id 1 _entity.type polymer _entity.src_method man _entity.pdbx_description 'Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 1' _entity.formula_weight 7066.801 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment 'UNP residues 1069-1129' _entity.details ? # _entity_name_com.entity_id 1 _entity_name_com.name ;DDEF1_SH3, 130 kDa phosphatidylinositol 4,5-biphosphate-dependent ARF1 GTPase-activating protein, PIP2-dependent ARF1 GAP, ADP-ribosylation factor-directed GTPase-activating protein 1, ARF GTPase-activating protein 1, Development and differentiation-enhancing factor 1, Differentiation-enhancing factor 1, DEF-1 ; # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code VRRVKTIYDCQADNDDELTFIEGEVIIVTGEEDQEWWIGHIEGQPERKGVFPVSFVHILSD _entity_poly.pdbx_seq_one_letter_code_can VRRVKTIYDCQADNDDELTFIEGEVIIVTGEEDQEWWIGHIEGQPERKGVFPVSFVHILSD _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 VAL n 1 2 ARG n 1 3 ARG n 1 4 VAL n 1 5 LYS n 1 6 THR n 1 7 ILE n 1 8 TYR n 1 9 ASP n 1 10 CYS n 1 11 GLN n 1 12 ALA n 1 13 ASP n 1 14 ASN n 1 15 ASP n 1 16 ASP n 1 17 GLU n 1 18 LEU n 1 19 THR n 1 20 PHE n 1 21 ILE n 1 22 GLU n 1 23 GLY n 1 24 GLU n 1 25 VAL n 1 26 ILE n 1 27 ILE n 1 28 VAL n 1 29 THR n 1 30 GLY n 1 31 GLU n 1 32 GLU n 1 33 ASP n 1 34 GLN n 1 35 GLU n 1 36 TRP n 1 37 TRP n 1 38 ILE n 1 39 GLY n 1 40 HIS n 1 41 ILE n 1 42 GLU n 1 43 GLY n 1 44 GLN n 1 45 PRO n 1 46 GLU n 1 47 ARG n 1 48 LYS n 1 49 GLY n 1 50 VAL n 1 51 PHE n 1 52 PRO n 1 53 VAL n 1 54 SER n 1 55 PHE n 1 56 VAL n 1 57 HIS n 1 58 ILE n 1 59 LEU n 1 60 SER n 1 61 ASP n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'ASAP1, DDEF1, KIAA1249' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type vector _entity_src_gen.pdbx_host_org_vector pET32a _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code ASAP1_HUMAN _struct_ref.pdbx_db_accession Q9ULH1 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code VRRVKTIYDCQADNDDELTFIEGEVIIVTGEEDQEWWIGHIEGQPERKGVFPVSFVHILSD _struct_ref.pdbx_align_begin 1069 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 2RQT _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 61 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q9ULH1 _struct_ref_seq.db_align_beg 1069 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 1129 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1069 _struct_ref_seq.pdbx_auth_seq_align_end 1129 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.solution_id _pdbx_nmr_exptl.type 1 1 1 '2D 1H-15N HSQC' 1 2 2 '3D HNCACB' 1 3 2 '3D CBCA(CO)NH' 1 4 2 '3D HNCO' 1 5 2 '3D HN(CA)CO' 1 6 2 '3D H(CCO)NH' 1 7 3 '3D HCCH-TOCSY' 1 8 1 '3D 15N-edited NOESY' 1 9 3 '3D 13C-edited NOESY' 1 10 4 '2D 1H-13C HSQC' 1 11 4 '2D 1H-13C CT-HSQC' # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.ionic_strength ? _pdbx_nmr_exptl_sample_conditions.pH 7.2 _pdbx_nmr_exptl_sample_conditions.pressure ambient _pdbx_nmr_exptl_sample_conditions.pressure_units ? _pdbx_nmr_exptl_sample_conditions.temperature 298 _pdbx_nmr_exptl_sample_conditions.temperature_units K # loop_ _pdbx_nmr_sample_details.contents _pdbx_nmr_sample_details.solution_id _pdbx_nmr_sample_details.solvent_system '0.7 mM [U-15N] DDEF1 SH3-1, 20 mM sodium phosphate-2, 50 mM sodium chloride-3, 0.02 % sodium azide-4, 90% H2O/10% D2O' 1 '90% H2O/10% D2O' '0.7 mM [U-13C; U-15N] DDEF1 SH3-5, 20 mM sodium phosphate-6, 50 mM sodium chloride-7, 0.02 % sodium azide-8, 90% H2O/10% D2O' 2 '90% H2O/10% D2O' '0.7 mM [U-13C; U-15N] DDEF1 SH3-9, 20 mM sodium phosphate-10, 50 mM sodium chloride-11, 0.02 % sodium azide-12, 100% D2O' 3 '100% D2O' ;0.7 mM [U-15% 13C; U-15N] DDEF1 SH3-13, 20 mM sodium phosphate-14, 50 mM sodium chloride-15, 0.02 % sodium azide-16, 90% H2O/10% D2O ; 4 '90% H2O/10% D2O' # loop_ _pdbx_nmr_spectrometer.field_strength _pdbx_nmr_spectrometer.manufacturer _pdbx_nmr_spectrometer.model _pdbx_nmr_spectrometer.spectrometer_id _pdbx_nmr_spectrometer.type 500 Bruker DRX 1 'Bruker DRX' 600 Bruker DRX 2 'Bruker DRX' 800 Bruker DRX 3 'Bruker DRX' # _pdbx_nmr_refine.entry_id 2RQT _pdbx_nmr_refine.method 'torsion angle dynamics, simulated annealing' _pdbx_nmr_refine.details ? _pdbx_nmr_refine.software_ordinal 1 # _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.conformer_selection_criteria 'structures with the lowest energy' _pdbx_nmr_ensemble.conformers_calculated_total_number 50 _pdbx_nmr_ensemble.conformers_submitted_total_number 20 _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.entry_id 2RQT _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.representative_conformer 1 _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.entry_id 2RQT _pdbx_nmr_representative.selection_criteria 'lowest energy' # loop_ _pdbx_nmr_software.authors _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.ordinal 'Bruker Biospin' collection XwinNMR 3.5 1 'Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax' processing NMRPipe ? 2 'Goddard and Kneller' 'data analysis' Sparky 3.115 3 'Guntert, Mumenthaler and Wuthrich' 'structure solution' CYANA 2.1 4 'Rieping, Habeck, Bardiaux, Bernard, Malliavin, and Nilges' refinement ARIA 2.2 5 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.crystals_number ? _exptl.details ? _exptl.entry_id 2RQT _exptl.method 'SOLUTION NMR' _exptl.method_details ? # _struct.entry_id 2RQT _struct.title 'Solution structure of the human DDEF1 SH3 domain' _struct.pdbx_model_details 'lowest energy, model 1' _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2RQT _struct_keywords.pdbx_keywords 'SIGNALING PROTEIN' _struct_keywords.text 'SH3 domain, GAP, GTPase activation, Membrane, SIGNALING PROTEIN' # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # _struct_biol.id 1 # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 5 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 GLN A 44 ? PRO A 52 ? GLN A 1112 PRO A 1120 A 2 TRP A 36 ? ILE A 41 ? TRP A 1104 ILE A 1109 A 3 VAL A 25 ? GLU A 31 ? VAL A 1093 GLU A 1099 A 4 ARG A 3 ? THR A 6 ? ARG A 1071 THR A 1074 A 5 VAL A 56 ? LEU A 59 ? VAL A 1124 LEU A 1127 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O ARG A 47 ? O ARG A 1115 N ILE A 41 ? N ILE A 1109 A 2 3 O HIS A 40 ? O HIS A 1108 N ILE A 27 ? N ILE A 1095 A 3 4 O ILE A 26 ? O ILE A 1094 N VAL A 4 ? N VAL A 1072 A 4 5 N ARG A 3 ? N ARG A 1071 O LEU A 59 ? O LEU A 1127 # _atom_sites.entry_id 2RQT _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 VAL 1 1069 1069 VAL VAL A . n A 1 2 ARG 2 1070 1070 ARG ARG A . n A 1 3 ARG 3 1071 1071 ARG ARG A . n A 1 4 VAL 4 1072 1072 VAL VAL A . n A 1 5 LYS 5 1073 1073 LYS LYS A . n A 1 6 THR 6 1074 1074 THR THR A . n A 1 7 ILE 7 1075 1075 ILE ILE A . n A 1 8 TYR 8 1076 1076 TYR TYR A . n A 1 9 ASP 9 1077 1077 ASP ASP A . n A 1 10 CYS 10 1078 1078 CYS CYS A . n A 1 11 GLN 11 1079 1079 GLN GLN A . n A 1 12 ALA 12 1080 1080 ALA ALA A . n A 1 13 ASP 13 1081 1081 ASP ASP A . n A 1 14 ASN 14 1082 1082 ASN ASN A . n A 1 15 ASP 15 1083 1083 ASP ASP A . n A 1 16 ASP 16 1084 1084 ASP ASP A . n A 1 17 GLU 17 1085 1085 GLU GLU A . n A 1 18 LEU 18 1086 1086 LEU LEU A . n A 1 19 THR 19 1087 1087 THR THR A . n A 1 20 PHE 20 1088 1088 PHE PHE A . n A 1 21 ILE 21 1089 1089 ILE ILE A . n A 1 22 GLU 22 1090 1090 GLU GLU A . n A 1 23 GLY 23 1091 1091 GLY GLY A . n A 1 24 GLU 24 1092 1092 GLU GLU A . n A 1 25 VAL 25 1093 1093 VAL VAL A . n A 1 26 ILE 26 1094 1094 ILE ILE A . n A 1 27 ILE 27 1095 1095 ILE ILE A . n A 1 28 VAL 28 1096 1096 VAL VAL A . n A 1 29 THR 29 1097 1097 THR THR A . n A 1 30 GLY 30 1098 1098 GLY GLY A . n A 1 31 GLU 31 1099 1099 GLU GLU A . n A 1 32 GLU 32 1100 1100 GLU GLU A . n A 1 33 ASP 33 1101 1101 ASP ASP A . n A 1 34 GLN 34 1102 1102 GLN GLN A . n A 1 35 GLU 35 1103 1103 GLU GLU A . n A 1 36 TRP 36 1104 1104 TRP TRP A . n A 1 37 TRP 37 1105 1105 TRP TRP A . n A 1 38 ILE 38 1106 1106 ILE ILE A . n A 1 39 GLY 39 1107 1107 GLY GLY A . n A 1 40 HIS 40 1108 1108 HIS HIS A . n A 1 41 ILE 41 1109 1109 ILE ILE A . n A 1 42 GLU 42 1110 1110 GLU GLU A . n A 1 43 GLY 43 1111 1111 GLY GLY A . n A 1 44 GLN 44 1112 1112 GLN GLN A . n A 1 45 PRO 45 1113 1113 PRO PRO A . n A 1 46 GLU 46 1114 1114 GLU GLU A . n A 1 47 ARG 47 1115 1115 ARG ARG A . n A 1 48 LYS 48 1116 1116 LYS LYS A . n A 1 49 GLY 49 1117 1117 GLY GLY A . n A 1 50 VAL 50 1118 1118 VAL VAL A . n A 1 51 PHE 51 1119 1119 PHE PHE A . n A 1 52 PRO 52 1120 1120 PRO PRO A . n A 1 53 VAL 53 1121 1121 VAL VAL A . n A 1 54 SER 54 1122 1122 SER SER A . n A 1 55 PHE 55 1123 1123 PHE PHE A . n A 1 56 VAL 56 1124 1124 VAL VAL A . n A 1 57 HIS 57 1125 1125 HIS HIS A . n A 1 58 ILE 58 1126 1126 ILE ILE A . n A 1 59 LEU 59 1127 1127 LEU LEU A . n A 1 60 SER 60 1128 1128 SER SER A . n A 1 61 ASP 61 1129 1129 ASP ASP A . n # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2010-07-07 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2022-03-16 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' database_2 2 3 'Structure model' pdbx_nmr_software 3 3 'Structure model' pdbx_struct_assembly 4 3 'Structure model' pdbx_struct_oper_list # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_database_2.pdbx_DOI' 2 3 'Structure model' '_database_2.pdbx_database_accession' 3 3 'Structure model' '_pdbx_nmr_software.name' # loop_ _pdbx_nmr_exptl_sample.component _pdbx_nmr_exptl_sample.concentration _pdbx_nmr_exptl_sample.concentration_range _pdbx_nmr_exptl_sample.concentration_units _pdbx_nmr_exptl_sample.isotopic_labeling _pdbx_nmr_exptl_sample.solution_id 'DDEF1 SH3-1' 0.7 ? mM '[U-15N]' 1 'sodium phosphate-2' 20 ? mM ? 1 'sodium chloride-3' 50 ? mM ? 1 'sodium azide-4' 0.02 ? % ? 1 'DDEF1 SH3-5' 0.7 ? mM '[U-13C; U-15N]' 2 'sodium phosphate-6' 20 ? mM ? 2 'sodium chloride-7' 50 ? mM ? 2 'sodium azide-8' 0.02 ? % ? 2 'DDEF1 SH3-9' 0.7 ? mM '[U-13C; U-15N]' 3 'sodium phosphate-10' 20 ? mM ? 3 'sodium chloride-11' 50 ? mM ? 3 'sodium azide-12' 0.02 ? % ? 3 'DDEF1 SH3-13' 0.7 ? mM '[U-15% 13C; U-15N]' 4 'sodium phosphate-14' 20 ? mM ? 4 'sodium chloride-15' 50 ? mM ? 4 'sodium azide-16' 0.02 ? % ? 4 # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 16 H1 A VAL 1069 ? ? O A ASP 1129 ? ? 1.57 2 19 H2 A VAL 1069 ? ? OXT A ASP 1129 ? ? 1.57 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 GLN A 1112 ? ? -154.32 78.52 2 1 SER A 1128 ? ? -80.80 45.11 3 3 GLN A 1112 ? ? -150.36 79.66 4 6 SER A 1128 ? ? -99.14 45.37 5 7 ASP A 1101 ? ? -145.26 -158.39 6 9 ARG A 1070 ? ? -169.41 111.39 7 9 GLU A 1100 ? ? -121.86 -55.57 8 11 GLN A 1112 ? ? -150.97 72.50 9 13 ASP A 1101 ? ? -129.35 -166.15 10 13 SER A 1128 ? ? -88.69 42.00 11 15 GLN A 1112 ? ? -162.31 90.17 12 15 SER A 1128 ? ? -90.25 39.58 13 19 SER A 1128 ? ? -90.08 47.08 #