data_2STW # _entry.id 2STW # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.356 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2STW pdb_00002stw 10.2210/pdb2stw/pdb WWPDB D_1000178657 ? ? # _pdbx_database_PDB_obs_spr.id SPRSDE _pdbx_database_PDB_obs_spr.date 1997-03-12 _pdbx_database_PDB_obs_spr.pdb_id 2STW _pdbx_database_PDB_obs_spr.replace_pdb_id 1STW _pdbx_database_PDB_obs_spr.details ? # _pdbx_database_related.db_name PDB _pdbx_database_related.db_id 2STT _pdbx_database_related.details 'ENSEMBLE OF 25 STRUCTURES' _pdbx_database_related.content_type ensemble # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 2STW _pdbx_database_status.recvd_initial_deposition_date 1996-08-05 _pdbx_database_status.deposit_site ? _pdbx_database_status.process_site BNL _pdbx_database_status.SG_entry . _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Clore, G.M.' 1 'Werner, M.H.' 2 'Gronenborn, A.M.' 3 # _citation.id primary _citation.title 'Correction of the NMR structure of the ETS1/DNA complex.' _citation.journal_abbrev J.Biomol.NMR _citation.journal_volume 10 _citation.page_first 317 _citation.page_last 328 _citation.year 1997 _citation.journal_id_ASTM JBNME9 _citation.country NE _citation.journal_id_ISSN 0925-2738 _citation.journal_id_CSD 0800 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 9460239 _citation.pdbx_database_id_DOI 10.1023/A:1018399711996 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Werner, M.H.' 1 ? primary 'Clore, G.M.' 2 ? primary 'Fisher, C.L.' 3 ? primary 'Fisher, R.J.' 4 ? primary 'Trinh, L.' 5 ? primary 'Shiloach, J.' 6 ? primary 'Gronenborn, A.M.' 7 ? # _cell.entry_id 2STW _cell.length_a 1.000 _cell.length_b 1.000 _cell.length_c 1.000 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 1 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2STW _symmetry.space_group_name_H-M 'P 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn ;DNA (5'-D(*TP*CP*GP*AP*GP*CP*CP*GP*GP*AP*AP*GP*TP*TP*CP*GP*A)-3') ; 5252.410 1 ? ? ? ? 2 polymer syn ;DNA (5'-D(*TP*CP*GP*AP*AP*CP*TP*TP*CP*CP*GP*GP*CP*TP*CP*GP*A)-3') ; 5163.348 1 ? ? ? ? 3 polymer nat ETS1 11255.954 1 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 polydeoxyribonucleotide no no '(DT)(DC)(DG)(DA)(DG)(DC)(DC)(DG)(DG)(DA)(DA)(DG)(DT)(DT)(DC)(DG)(DA)' TCGAGCCGGAAGTTCGA B ? 2 polydeoxyribonucleotide no no '(DT)(DC)(DG)(DA)(DA)(DC)(DT)(DT)(DC)(DC)(DG)(DG)(DC)(DT)(DC)(DG)(DA)' TCGAACTTCCGGCTCGA C ? 3 'polypeptide(L)' no no ;VIPAAALAGYTGSGPIQLWQFLLELLTDKSCQSFISWTGDGWEFKLSDPDEVARRWGKRKNKPKMNYEKLSRGLRYYYDK NIIHKTAGKRYVYRFV ; ;VIPAAALAGYTGSGPIQLWQFLLELLTDKSCQSFISWTGDGWEFKLSDPDEVARRWGKRKNKPKMNYEKLSRGLRYYYDK NIIHKTAGKRYVYRFV ; A ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 DT n 1 2 DC n 1 3 DG n 1 4 DA n 1 5 DG n 1 6 DC n 1 7 DC n 1 8 DG n 1 9 DG n 1 10 DA n 1 11 DA n 1 12 DG n 1 13 DT n 1 14 DT n 1 15 DC n 1 16 DG n 1 17 DA n 2 1 DT n 2 2 DC n 2 3 DG n 2 4 DA n 2 5 DA n 2 6 DC n 2 7 DT n 2 8 DT n 2 9 DC n 2 10 DC n 2 11 DG n 2 12 DG n 2 13 DC n 2 14 DT n 2 15 DC n 2 16 DG n 2 17 DA n 3 1 VAL n 3 2 ILE n 3 3 PRO n 3 4 ALA n 3 5 ALA n 3 6 ALA n 3 7 LEU n 3 8 ALA n 3 9 GLY n 3 10 TYR n 3 11 THR n 3 12 GLY n 3 13 SER n 3 14 GLY n 3 15 PRO n 3 16 ILE n 3 17 GLN n 3 18 LEU n 3 19 TRP n 3 20 GLN n 3 21 PHE n 3 22 LEU n 3 23 LEU n 3 24 GLU n 3 25 LEU n 3 26 LEU n 3 27 THR n 3 28 ASP n 3 29 LYS n 3 30 SER n 3 31 CYS n 3 32 GLN n 3 33 SER n 3 34 PHE n 3 35 ILE n 3 36 SER n 3 37 TRP n 3 38 THR n 3 39 GLY n 3 40 ASP n 3 41 GLY n 3 42 TRP n 3 43 GLU n 3 44 PHE n 3 45 LYS n 3 46 LEU n 3 47 SER n 3 48 ASP n 3 49 PRO n 3 50 ASP n 3 51 GLU n 3 52 VAL n 3 53 ALA n 3 54 ARG n 3 55 ARG n 3 56 TRP n 3 57 GLY n 3 58 LYS n 3 59 ARG n 3 60 LYS n 3 61 ASN n 3 62 LYS n 3 63 PRO n 3 64 LYS n 3 65 MET n 3 66 ASN n 3 67 TYR n 3 68 GLU n 3 69 LYS n 3 70 LEU n 3 71 SER n 3 72 ARG n 3 73 GLY n 3 74 LEU n 3 75 ARG n 3 76 TYR n 3 77 TYR n 3 78 TYR n 3 79 ASP n 3 80 LYS n 3 81 ASN n 3 82 ILE n 3 83 ILE n 3 84 HIS n 3 85 LYS n 3 86 THR n 3 87 ALA n 3 88 GLY n 3 89 LYS n 3 90 ARG n 3 91 TYR n 3 92 VAL n 3 93 TYR n 3 94 ARG n 3 95 PHE n 3 96 VAL n # _entity_src_nat.entity_id 3 _entity_src_nat.pdbx_src_id 1 _entity_src_nat.pdbx_alt_source_flag sample _entity_src_nat.pdbx_beg_seq_num ? _entity_src_nat.pdbx_end_seq_num ? _entity_src_nat.common_name human _entity_src_nat.pdbx_organism_scientific 'Homo sapiens' _entity_src_nat.pdbx_ncbi_taxonomy_id 9606 _entity_src_nat.genus Homo _entity_src_nat.species ? _entity_src_nat.strain ? _entity_src_nat.tissue ? _entity_src_nat.tissue_fraction ? _entity_src_nat.pdbx_secretion ? _entity_src_nat.pdbx_fragment ? _entity_src_nat.pdbx_variant ? _entity_src_nat.pdbx_cell_line ? _entity_src_nat.pdbx_atcc ? _entity_src_nat.pdbx_cellular_location ? _entity_src_nat.pdbx_organ ? _entity_src_nat.pdbx_organelle ? _entity_src_nat.pdbx_cell ? _entity_src_nat.pdbx_plasmid_name ? _entity_src_nat.pdbx_plasmid_details ? _entity_src_nat.details ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform _struct_ref.pdbx_seq_one_letter_code 1 UNP ETS1_HUMAN P14921 3 320 ? ? 2 PDB 2STW 2STW 1 ? ? ? 3 PDB 2STW 2STW 2 ? ? ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 2STW A 1 ? 96 ? P14921 320 ? 415 ? 10 105 2 2 2STW B 1 ? 17 ? 2STW 1 ? 17 ? 1 17 3 3 2STW C 1 ? 17 ? 2STW 18 ? 34 ? 18 34 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.temperature 305.00 _pdbx_nmr_exptl_sample_conditions.pressure ? _pdbx_nmr_exptl_sample_conditions.pH 6.80 _pdbx_nmr_exptl_sample_conditions.ionic_strength ? _pdbx_nmr_exptl_sample_conditions.pressure_units . _pdbx_nmr_exptl_sample_conditions.temperature_units K # loop_ _pdbx_nmr_spectrometer.spectrometer_id _pdbx_nmr_spectrometer.model _pdbx_nmr_spectrometer.manufacturer _pdbx_nmr_spectrometer.field_strength 1 AMX500 Bruker 500 2 AMX600 Bruker 600 # _pdbx_nmr_refine.entry_id 2STW _pdbx_nmr_refine.method 'simulated annealing' _pdbx_nmr_refine.details ;THE RESTRAINED REGULARIZED MEAN STRUCTURE IS PRESENTED IN ENTRY 2STW AND 25 STRUCTURES ARE PRESENTED IN ENTRY 2STT. IN 2STW THE LAST COLUMN REPRESENTS THE RMS OF THE 25 INDIVIDUAL SIMULATED ANNEALING STRUCTURES ABOUT THE MEAN COORDINATE POSITIONS. THE LAST COLUMN IN THE INDIVIDUAL SA STRUCTURES HAS NO MEANING. BEST FITTING TO GENERATE THE AVERAGE STRUCTURE IS WITH RESPECT TO RESIDUES 24 - 105 OF THE PROTEIN AND BASE PAIRS 1 - 17 OF THE DNA (RESIDUES 10 - 24 ARE DISORDERED IN SOLUTION). RESIDUE 10 CORRESPONDS TO RESIDUE 320 OF THE NATURAL SEQUENCE. NOTE THE OCCUPANCY FIELD HAS NO MEANING. ; _pdbx_nmr_refine.software_ordinal 1 # _pdbx_nmr_ensemble.entry_id 2STW _pdbx_nmr_ensemble.conformers_calculated_total_number ? _pdbx_nmr_ensemble.conformers_submitted_total_number 1 _pdbx_nmr_ensemble.conformer_selection_criteria 'REGULARIZED MEAN STRUCTURE' # loop_ _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.authors _pdbx_nmr_software.ordinal 'structure solution' XPLOR ? ? 1 refinement XPLOR ? ? 2 # _exptl.entry_id 2STW _exptl.method 'SOLUTION NMR' _exptl.crystals_number ? # _struct.entry_id 2STW _struct.title 'SOLUTION NMR STRUCTURE OF THE HUMAN ETS1/DNA COMPLEX, RESTRAINED REGULARIZED MEAN STRUCTURE' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2STW _struct_keywords.pdbx_keywords 'DNA BINDING PROTEIN/DNA' _struct_keywords.text 'COMPLEX (DNA-BINDING PROTEIN-DNA), PROTO-ONCOGENE, DNA-BINDING, NUCLEAR PROTEIN, PHOSPHORYLATION, DNA BINDING PROTEIN-DNA COMPLEX' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 H1 LEU C 18 ? THR C 27 ? LEU A 27 THR A 36 1 ? 10 HELX_P HELX_P2 H2 SER C 30 ? GLN C 32 ? SER A 39 GLN A 41 5 ? 3 HELX_P HELX_P3 H3 ASP C 50 ? LYS C 58 ? ASP A 59 LYS A 67 5 ? 9 HELX_P HELX_P4 H4 TYR C 67 ? TYR C 76 ? TYR A 76 TYR A 85 5 ? 10 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role hydrog1 hydrog ? ? A DT 1 N3 ? ? ? 1_555 B DA 17 N1 ? ? B DT 1 C DA 34 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A DT 1 O4 ? ? ? 1_555 B DA 17 N6 ? ? B DT 1 C DA 34 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A DC 2 N3 ? ? ? 1_555 B DG 16 N1 ? ? B DC 2 C DG 33 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A DC 2 N4 ? ? ? 1_555 B DG 16 O6 ? ? B DC 2 C DG 33 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A DC 2 O2 ? ? ? 1_555 B DG 16 N2 ? ? B DC 2 C DG 33 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A DG 3 N1 ? ? ? 1_555 B DC 15 N3 ? ? B DG 3 C DC 32 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A DG 3 N2 ? ? ? 1_555 B DC 15 O2 ? ? B DG 3 C DC 32 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A DG 3 O6 ? ? ? 1_555 B DC 15 N4 ? ? B DG 3 C DC 32 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A DA 4 N1 ? ? ? 1_555 B DT 14 N3 ? ? B DA 4 C DT 31 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A DA 4 N6 ? ? ? 1_555 B DT 14 O4 ? ? B DA 4 C DT 31 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A DG 5 N1 ? ? ? 1_555 B DC 13 N3 ? ? B DG 5 C DC 30 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A DG 5 N2 ? ? ? 1_555 B DC 13 O2 ? ? B DG 5 C DC 30 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A DG 5 O6 ? ? ? 1_555 B DC 13 N4 ? ? B DG 5 C DC 30 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? A DC 6 N3 ? ? ? 1_555 B DG 12 N1 ? ? B DC 6 C DG 29 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A DC 6 N4 ? ? ? 1_555 B DG 12 O6 ? ? B DC 6 C DG 29 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? A DC 6 O2 ? ? ? 1_555 B DG 12 N2 ? ? B DC 6 C DG 29 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? A DG 8 N1 ? ? ? 1_555 B DC 10 N3 ? ? B DG 8 C DC 27 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? A DG 8 N2 ? ? ? 1_555 B DC 10 O2 ? ? B DG 8 C DC 27 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? A DG 8 O6 ? ? ? 1_555 B DC 10 N4 ? ? B DG 8 C DC 27 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? A DG 9 N1 ? ? ? 1_555 B DC 9 N3 ? ? B DG 9 C DC 26 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? A DG 9 N2 ? ? ? 1_555 B DC 9 O2 ? ? B DG 9 C DC 26 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? A DG 9 O6 ? ? ? 1_555 B DC 9 N4 ? ? B DG 9 C DC 26 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? A DA 10 N1 ? ? ? 1_555 B DT 8 N3 ? ? B DA 10 C DT 25 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? A DA 10 N6 ? ? ? 1_555 B DT 8 O4 ? ? B DA 10 C DT 25 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? A DA 11 N1 ? ? ? 1_555 B DT 7 N3 ? ? B DA 11 C DT 24 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? A DA 11 N6 ? ? ? 1_555 B DT 7 O4 ? ? B DA 11 C DT 24 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? A DG 12 N1 ? ? ? 1_555 B DC 6 N3 ? ? B DG 12 C DC 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? A DG 12 N2 ? ? ? 1_555 B DC 6 O2 ? ? B DG 12 C DC 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? A DG 12 O6 ? ? ? 1_555 B DC 6 N4 ? ? B DG 12 C DC 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? A DT 13 N3 ? ? ? 1_555 B DA 5 N1 ? ? B DT 13 C DA 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog31 hydrog ? ? A DT 13 O4 ? ? ? 1_555 B DA 5 N6 ? ? B DT 13 C DA 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog32 hydrog ? ? A DT 14 N3 ? ? ? 1_555 B DA 4 N1 ? ? B DT 14 C DA 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog33 hydrog ? ? A DT 14 O4 ? ? ? 1_555 B DA 4 N6 ? ? B DT 14 C DA 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog34 hydrog ? ? A DC 15 N3 ? ? ? 1_555 B DG 3 N1 ? ? B DC 15 C DG 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog35 hydrog ? ? A DC 15 N4 ? ? ? 1_555 B DG 3 O6 ? ? B DC 15 C DG 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog36 hydrog ? ? A DC 15 O2 ? ? ? 1_555 B DG 3 N2 ? ? B DC 15 C DG 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog37 hydrog ? ? A DG 16 N1 ? ? ? 1_555 B DC 2 N3 ? ? B DG 16 C DC 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog38 hydrog ? ? A DG 16 N2 ? ? ? 1_555 B DC 2 O2 ? ? B DG 16 C DC 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog39 hydrog ? ? A DG 16 O6 ? ? ? 1_555 B DC 2 N4 ? ? B DG 16 C DC 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog40 hydrog ? ? A DA 17 N1 ? ? ? 1_555 B DT 1 N3 ? ? B DA 17 C DT 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog41 hydrog ? ? A DA 17 N6 ? ? ? 1_555 B DT 1 O4 ? ? B DA 17 C DT 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # _struct_conn_type.id hydrog _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 2 ? B ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel B 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 SER C 36 ? THR C 38 ? SER A 45 THR A 47 A 2 GLU C 43 ? LYS C 45 ? GLU A 52 LYS A 54 B 1 ILE C 83 ? LYS C 85 ? ILE A 92 LYS A 94 B 2 TYR C 93 ? PHE C 95 ? TYR A 102 PHE A 104 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O SER C 36 ? O SER A 45 N LYS C 45 ? N LYS A 54 B 1 2 O HIS C 84 ? O HIS A 93 N ARG C 94 ? N ARG A 103 # _database_PDB_matrix.entry_id 2STW _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 2STW _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 DT 1 1 1 DT T B . n A 1 2 DC 2 2 2 DC C B . n A 1 3 DG 3 3 3 DG G B . n A 1 4 DA 4 4 4 DA A B . n A 1 5 DG 5 5 5 DG G B . n A 1 6 DC 6 6 6 DC C B . n A 1 7 DC 7 7 7 DC C B . n A 1 8 DG 8 8 8 DG G B . n A 1 9 DG 9 9 9 DG G B . n A 1 10 DA 10 10 10 DA A B . n A 1 11 DA 11 11 11 DA A B . n A 1 12 DG 12 12 12 DG G B . n A 1 13 DT 13 13 13 DT T B . n A 1 14 DT 14 14 14 DT T B . n A 1 15 DC 15 15 15 DC C B . n A 1 16 DG 16 16 16 DG G B . n A 1 17 DA 17 17 17 DA A B . n B 2 1 DT 1 18 18 DT T C . n B 2 2 DC 2 19 19 DC C C . n B 2 3 DG 3 20 20 DG G C . n B 2 4 DA 4 21 21 DA A C . n B 2 5 DA 5 22 22 DA A C . n B 2 6 DC 6 23 23 DC C C . n B 2 7 DT 7 24 24 DT T C . n B 2 8 DT 8 25 25 DT T C . n B 2 9 DC 9 26 26 DC C C . n B 2 10 DC 10 27 27 DC C C . n B 2 11 DG 11 28 28 DG G C . n B 2 12 DG 12 29 29 DG G C . n B 2 13 DC 13 30 30 DC C C . n B 2 14 DT 14 31 31 DT T C . n B 2 15 DC 15 32 32 DC C C . n B 2 16 DG 16 33 33 DG G C . n B 2 17 DA 17 34 34 DA A C . n C 3 1 VAL 1 10 10 VAL VAL A . n C 3 2 ILE 2 11 11 ILE ILE A . n C 3 3 PRO 3 12 12 PRO PRO A . n C 3 4 ALA 4 13 13 ALA ALA A . n C 3 5 ALA 5 14 14 ALA ALA A . n C 3 6 ALA 6 15 15 ALA ALA A . n C 3 7 LEU 7 16 16 LEU LEU A . n C 3 8 ALA 8 17 17 ALA ALA A . n C 3 9 GLY 9 18 18 GLY GLY A . n C 3 10 TYR 10 19 19 TYR TYR A . n C 3 11 THR 11 20 20 THR THR A . n C 3 12 GLY 12 21 21 GLY GLY A . n C 3 13 SER 13 22 22 SER SER A . n C 3 14 GLY 14 23 23 GLY GLY A . n C 3 15 PRO 15 24 24 PRO PRO A . n C 3 16 ILE 16 25 25 ILE ILE A . n C 3 17 GLN 17 26 26 GLN GLN A . n C 3 18 LEU 18 27 27 LEU LEU A . n C 3 19 TRP 19 28 28 TRP TRP A . n C 3 20 GLN 20 29 29 GLN GLN A . n C 3 21 PHE 21 30 30 PHE PHE A . n C 3 22 LEU 22 31 31 LEU LEU A . n C 3 23 LEU 23 32 32 LEU LEU A . n C 3 24 GLU 24 33 33 GLU GLU A . n C 3 25 LEU 25 34 34 LEU LEU A . n C 3 26 LEU 26 35 35 LEU LEU A . n C 3 27 THR 27 36 36 THR THR A . n C 3 28 ASP 28 37 37 ASP ASP A . n C 3 29 LYS 29 38 38 LYS LYS A . n C 3 30 SER 30 39 39 SER SER A . n C 3 31 CYS 31 40 40 CYS CYS A . n C 3 32 GLN 32 41 41 GLN GLN A . n C 3 33 SER 33 42 42 SER SER A . n C 3 34 PHE 34 43 43 PHE PHE A . n C 3 35 ILE 35 44 44 ILE ILE A . n C 3 36 SER 36 45 45 SER SER A . n C 3 37 TRP 37 46 46 TRP TRP A . n C 3 38 THR 38 47 47 THR THR A . n C 3 39 GLY 39 48 48 GLY GLY A . n C 3 40 ASP 40 49 49 ASP ASP A . n C 3 41 GLY 41 50 50 GLY GLY A . n C 3 42 TRP 42 51 51 TRP TRP A . n C 3 43 GLU 43 52 52 GLU GLU A . n C 3 44 PHE 44 53 53 PHE PHE A . n C 3 45 LYS 45 54 54 LYS LYS A . n C 3 46 LEU 46 55 55 LEU LEU A . n C 3 47 SER 47 56 56 SER SER A . n C 3 48 ASP 48 57 57 ASP ASP A . n C 3 49 PRO 49 58 58 PRO PRO A . n C 3 50 ASP 50 59 59 ASP ASP A . n C 3 51 GLU 51 60 60 GLU GLU A . n C 3 52 VAL 52 61 61 VAL VAL A . n C 3 53 ALA 53 62 62 ALA ALA A . n C 3 54 ARG 54 63 63 ARG ARG A . n C 3 55 ARG 55 64 64 ARG ARG A . n C 3 56 TRP 56 65 65 TRP TRP A . n C 3 57 GLY 57 66 66 GLY GLY A . n C 3 58 LYS 58 67 67 LYS LYS A . n C 3 59 ARG 59 68 68 ARG ARG A . n C 3 60 LYS 60 69 69 LYS LYS A . n C 3 61 ASN 61 70 70 ASN ASN A . n C 3 62 LYS 62 71 71 LYS LYS A . n C 3 63 PRO 63 72 72 PRO PRO A . n C 3 64 LYS 64 73 73 LYS LYS A . n C 3 65 MET 65 74 74 MET MET A . n C 3 66 ASN 66 75 75 ASN ASN A . n C 3 67 TYR 67 76 76 TYR TYR A . n C 3 68 GLU 68 77 77 GLU GLU A . n C 3 69 LYS 69 78 78 LYS LYS A . n C 3 70 LEU 70 79 79 LEU LEU A . n C 3 71 SER 71 80 80 SER SER A . n C 3 72 ARG 72 81 81 ARG ARG A . n C 3 73 GLY 73 82 82 GLY GLY A . n C 3 74 LEU 74 83 83 LEU LEU A . n C 3 75 ARG 75 84 84 ARG ARG A . n C 3 76 TYR 76 85 85 TYR TYR A . n C 3 77 TYR 77 86 86 TYR TYR A . n C 3 78 TYR 78 87 87 TYR TYR A . n C 3 79 ASP 79 88 88 ASP ASP A . n C 3 80 LYS 80 89 89 LYS LYS A . n C 3 81 ASN 81 90 90 ASN ASN A . n C 3 82 ILE 82 91 91 ILE ILE A . n C 3 83 ILE 83 92 92 ILE ILE A . n C 3 84 HIS 84 93 93 HIS HIS A . n C 3 85 LYS 85 94 94 LYS LYS A . n C 3 86 THR 86 95 95 THR THR A . n C 3 87 ALA 87 96 96 ALA ALA A . n C 3 88 GLY 88 97 97 GLY GLY A . n C 3 89 LYS 89 98 98 LYS LYS A . n C 3 90 ARG 90 99 99 ARG ARG A . n C 3 91 TYR 91 100 100 TYR TYR A . n C 3 92 VAL 92 101 101 VAL VAL A . n C 3 93 TYR 93 102 102 TYR TYR A . n C 3 94 ARG 94 103 103 ARG ARG A . n C 3 95 PHE 95 104 104 PHE PHE A . n C 3 96 VAL 96 105 105 VAL VAL A . n # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 1997-03-12 2 'Structure model' 1 1 2008-03-25 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2022-03-16 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Database references' 4 4 'Structure model' 'Derived calculations' 5 4 'Structure model' Other # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' database_2 2 4 'Structure model' pdbx_database_status 3 4 'Structure model' pdbx_struct_assembly 4 4 'Structure model' pdbx_struct_oper_list # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_pdbx_database_status.process_site' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal X-PLOR 'model building' 3.1 ? 1 X-PLOR refinement 3.1 ? 2 X-PLOR phasing 3.1 ? 3 # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 O A PRO 12 ? ? H A LEU 16 ? ? 1.41 2 1 O A THR 20 ? ? H A SER 22 ? ? 1.43 3 1 O A TRP 28 ? ? H A LEU 32 ? ? 1.48 4 1 O A ALA 13 ? ? H A ALA 17 ? ? 1.57 # _pdbx_validate_rmsd_bond.id 1 _pdbx_validate_rmsd_bond.PDB_model_num 1 _pdbx_validate_rmsd_bond.auth_atom_id_1 C5 _pdbx_validate_rmsd_bond.auth_asym_id_1 C _pdbx_validate_rmsd_bond.auth_comp_id_1 DT _pdbx_validate_rmsd_bond.auth_seq_id_1 25 _pdbx_validate_rmsd_bond.PDB_ins_code_1 ? _pdbx_validate_rmsd_bond.label_alt_id_1 ? _pdbx_validate_rmsd_bond.auth_atom_id_2 C7 _pdbx_validate_rmsd_bond.auth_asym_id_2 C _pdbx_validate_rmsd_bond.auth_comp_id_2 DT _pdbx_validate_rmsd_bond.auth_seq_id_2 25 _pdbx_validate_rmsd_bond.PDB_ins_code_2 ? _pdbx_validate_rmsd_bond.label_alt_id_2 ? _pdbx_validate_rmsd_bond.bond_value 1.532 _pdbx_validate_rmsd_bond.bond_target_value 1.496 _pdbx_validate_rmsd_bond.bond_deviation 0.036 _pdbx_validate_rmsd_bond.bond_standard_deviation 0.006 _pdbx_validate_rmsd_bond.linker_flag N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "O4'" B DT 1 ? ? "C1'" B DT 1 ? ? N1 B DT 1 ? ? 111.04 108.30 2.74 0.30 N 2 1 "O4'" B DC 2 ? ? "C1'" B DC 2 ? ? N1 B DC 2 ? ? 110.96 108.30 2.66 0.30 N 3 1 "O4'" B DG 3 ? ? "C1'" B DG 3 ? ? N9 B DG 3 ? ? 111.02 108.30 2.72 0.30 N 4 1 "O4'" B DA 4 ? ? "C1'" B DA 4 ? ? N9 B DA 4 ? ? 111.08 108.30 2.78 0.30 N 5 1 N1 B DA 4 ? ? C2 B DA 4 ? ? N3 B DA 4 ? ? 126.19 129.30 -3.11 0.50 N 6 1 "O4'" B DG 5 ? ? "C1'" B DG 5 ? ? N9 B DG 5 ? ? 111.60 108.30 3.30 0.30 N 7 1 "O4'" B DC 7 ? ? "C1'" B DC 7 ? ? N1 B DC 7 ? ? 111.81 108.30 3.51 0.30 N 8 1 "O4'" B DG 8 ? ? "C1'" B DG 8 ? ? N9 B DG 8 ? ? 110.90 108.30 2.60 0.30 N 9 1 "O4'" B DG 9 ? ? "C1'" B DG 9 ? ? N9 B DG 9 ? ? 111.76 108.30 3.46 0.30 N 10 1 "O4'" B DA 10 ? ? "C1'" B DA 10 ? ? N9 B DA 10 ? ? 111.43 108.30 3.13 0.30 N 11 1 N1 B DA 10 ? ? C2 B DA 10 ? ? N3 B DA 10 ? ? 126.16 129.30 -3.14 0.50 N 12 1 "O4'" B DA 11 ? ? "C1'" B DA 11 ? ? N9 B DA 11 ? ? 111.21 108.30 2.91 0.30 N 13 1 N1 B DA 11 ? ? C2 B DA 11 ? ? N3 B DA 11 ? ? 126.13 129.30 -3.17 0.50 N 14 1 "O4'" B DG 12 ? ? "C1'" B DG 12 ? ? N9 B DG 12 ? ? 111.69 108.30 3.39 0.30 N 15 1 "O4'" B DT 13 ? ? "C1'" B DT 13 ? ? N1 B DT 13 ? ? 111.26 108.30 2.96 0.30 N 16 1 "O4'" B DT 14 ? ? "C1'" B DT 14 ? ? N1 B DT 14 ? ? 111.51 108.30 3.21 0.30 N 17 1 "O4'" B DC 15 ? ? "C1'" B DC 15 ? ? N1 B DC 15 ? ? 110.27 108.30 1.97 0.30 N 18 1 "O4'" B DG 16 ? ? "C1'" B DG 16 ? ? N9 B DG 16 ? ? 111.14 108.30 2.84 0.30 N 19 1 "O4'" B DA 17 ? ? "C1'" B DA 17 ? ? N9 B DA 17 ? ? 111.27 108.30 2.97 0.30 N 20 1 N1 B DA 17 ? ? C2 B DA 17 ? ? N3 B DA 17 ? ? 126.22 129.30 -3.08 0.50 N 21 1 "O4'" C DT 18 ? ? "C1'" C DT 18 ? ? N1 C DT 18 ? ? 110.94 108.30 2.64 0.30 N 22 1 "O4'" C DC 19 ? ? "C1'" C DC 19 ? ? N1 C DC 19 ? ? 110.39 108.30 2.09 0.30 N 23 1 "O4'" C DG 20 ? ? "C1'" C DG 20 ? ? N9 C DG 20 ? ? 111.20 108.30 2.90 0.30 N 24 1 "O4'" C DA 21 ? ? "C1'" C DA 21 ? ? N9 C DA 21 ? ? 111.61 108.30 3.31 0.30 N 25 1 N1 C DA 21 ? ? C2 C DA 21 ? ? N3 C DA 21 ? ? 126.20 129.30 -3.10 0.50 N 26 1 "O4'" C DA 22 ? ? "C1'" C DA 22 ? ? N9 C DA 22 ? ? 110.97 108.30 2.67 0.30 N 27 1 N1 C DA 22 ? ? C2 C DA 22 ? ? N3 C DA 22 ? ? 126.24 129.30 -3.06 0.50 N 28 1 "O4'" C DC 23 ? ? "C1'" C DC 23 ? ? N1 C DC 23 ? ? 111.95 108.30 3.65 0.30 N 29 1 "O4'" C DT 24 ? ? "C1'" C DT 24 ? ? N1 C DT 24 ? ? 110.27 108.30 1.97 0.30 N 30 1 "O4'" C DT 25 ? ? "C1'" C DT 25 ? ? N1 C DT 25 ? ? 111.96 108.30 3.66 0.30 N 31 1 "O4'" C DC 26 ? ? "C1'" C DC 26 ? ? N1 C DC 26 ? ? 110.93 108.30 2.63 0.30 N 32 1 "O4'" C DC 27 ? ? "C1'" C DC 27 ? ? N1 C DC 27 ? ? 110.50 108.30 2.20 0.30 N 33 1 "O4'" C DG 28 ? ? "C1'" C DG 28 ? ? N9 C DG 28 ? ? 111.13 108.30 2.83 0.30 N 34 1 "O4'" C DG 29 ? ? "C1'" C DG 29 ? ? N9 C DG 29 ? ? 112.03 108.30 3.73 0.30 N 35 1 "O4'" C DC 30 ? ? "C1'" C DC 30 ? ? N1 C DC 30 ? ? 110.64 108.30 2.34 0.30 N 36 1 "O4'" C DT 31 ? ? "C1'" C DT 31 ? ? N1 C DT 31 ? ? 111.61 108.30 3.31 0.30 N 37 1 "O4'" C DC 32 ? ? "C1'" C DC 32 ? ? N1 C DC 32 ? ? 110.28 108.30 1.98 0.30 N 38 1 "O4'" C DG 33 ? ? "C1'" C DG 33 ? ? N9 C DG 33 ? ? 111.03 108.30 2.73 0.30 N 39 1 "O4'" C DA 34 ? ? "C1'" C DA 34 ? ? N9 C DA 34 ? ? 110.88 108.30 2.58 0.30 N 40 1 N1 C DA 34 ? ? C2 C DA 34 ? ? N3 C DA 34 ? ? 126.21 129.30 -3.09 0.50 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ALA A 17 ? ? -60.66 -73.97 2 1 SER A 22 ? ? -86.77 49.85 3 1 LEU A 27 ? ? -42.97 -77.70 4 1 LEU A 35 ? ? -67.98 -70.96 5 1 ASP A 37 ? ? -117.56 -131.55 6 1 LYS A 38 ? ? -61.50 -146.29 7 1 CYS A 40 ? ? 83.17 8.34 8 1 ILE A 44 ? ? -166.05 -168.61 9 1 ASP A 49 ? ? -129.23 -112.81 10 1 ASN A 70 ? ? 54.78 18.86 11 1 ARG A 81 ? ? -89.41 -73.93 12 1 TYR A 85 ? ? -48.75 -8.97 13 1 TYR A 87 ? ? -76.20 29.65 14 1 ILE A 91 ? ? -138.45 -61.14 15 1 LYS A 98 ? ? -110.75 -140.42 # loop_ _pdbx_validate_planes.id _pdbx_validate_planes.PDB_model_num _pdbx_validate_planes.auth_comp_id _pdbx_validate_planes.auth_asym_id _pdbx_validate_planes.auth_seq_id _pdbx_validate_planes.PDB_ins_code _pdbx_validate_planes.label_alt_id _pdbx_validate_planes.rmsd _pdbx_validate_planes.type 1 1 ARG A 64 ? ? 0.088 'SIDE CHAIN' 2 1 ARG A 68 ? ? 0.076 'SIDE CHAIN' # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 2STW 'double helix' 2STW 'b-form double helix' 2STW 'mismatched base pair' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A DT 1 1_555 B DA 17 1_555 0.582 -0.105 -0.044 -1.599 0.579 -4.335 1 B_DT1:DA34_C B 1 ? C 34 ? 20 1 1 A DC 2 1_555 B DG 16 1_555 -0.398 -0.043 -0.004 1.477 -1.230 -0.836 2 B_DC2:DG33_C B 2 ? C 33 ? 19 1 1 A DG 3 1_555 B DC 15 1_555 0.484 0.030 0.137 0.224 -1.882 2.913 3 B_DG3:DC32_C B 3 ? C 32 ? 19 1 1 A DA 4 1_555 B DT 14 1_555 -0.673 -0.032 -0.333 3.772 -8.031 -2.305 4 B_DA4:DT31_C B 4 ? C 31 ? 20 1 1 A DG 5 1_555 B DC 13 1_555 0.518 -0.049 -0.215 14.969 -8.130 -0.878 5 B_DG5:DC30_C B 5 ? C 30 ? 19 1 1 A DC 6 1_555 B DG 12 1_555 -0.605 -0.071 0.301 14.534 -1.916 4.287 6 B_DC6:DG29_C B 6 ? C 29 ? 19 1 1 A DG 8 1_555 B DC 10 1_555 0.073 0.004 -0.525 -3.556 12.550 1.890 7 B_DG8:DC27_C B 8 ? C 27 ? 19 1 1 A DG 9 1_555 B DC 9 1_555 0.509 -0.001 -0.453 -9.577 3.680 1.083 8 B_DG9:DC26_C B 9 ? C 26 ? 19 1 1 A DA 10 1_555 B DT 8 1_555 -0.280 -0.065 0.070 -3.416 -9.809 3.932 9 B_DA10:DT25_C B 10 ? C 25 ? 20 1 1 A DA 11 1_555 B DT 7 1_555 -0.179 -0.272 -0.123 -5.481 -21.147 6.369 10 B_DA11:DT24_C B 11 ? C 24 ? 20 1 1 A DG 12 1_555 B DC 6 1_555 -0.176 -0.059 0.465 -0.202 1.518 0.164 11 B_DG12:DC23_C B 12 ? C 23 ? 19 1 1 A DT 13 1_555 B DA 5 1_555 0.371 -0.237 -0.818 -4.765 -12.949 2.307 12 B_DT13:DA22_C B 13 ? C 22 ? 20 1 1 A DT 14 1_555 B DA 4 1_555 0.231 -0.013 0.038 -4.173 -18.380 2.650 13 B_DT14:DA21_C B 14 ? C 21 ? 20 1 1 A DC 15 1_555 B DG 3 1_555 -0.482 0.030 0.007 -3.318 -1.382 3.888 14 B_DC15:DG20_C B 15 ? C 20 ? 19 1 1 A DG 16 1_555 B DC 2 1_555 0.535 -0.006 -0.078 -6.680 -1.455 -1.655 15 B_DG16:DC19_C B 16 ? C 19 ? 19 1 1 A DA 17 1_555 B DT 1 1_555 -0.699 -0.056 -0.025 3.705 0.422 -2.652 16 B_DA17:DT18_C B 17 ? C 18 ? 20 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A DT 1 1_555 B DA 17 1_555 A DC 2 1_555 B DG 16 1_555 0.076 -0.120 3.588 0.797 12.167 29.285 -2.674 0.022 3.280 22.857 -1.496 31.671 1 BB_DT1DC2:DG33DA34_CC B 1 ? C 34 ? B 2 ? C 33 ? 1 A DC 2 1_555 B DG 16 1_555 A DG 3 1_555 B DC 15 1_555 -0.060 1.098 4.357 0.135 -5.402 37.468 2.601 0.116 4.165 -8.357 -0.209 37.842 2 BB_DC2DG3:DC32DG33_CC B 2 ? C 33 ? B 3 ? C 32 ? 1 A DG 3 1_555 B DC 15 1_555 A DA 4 1_555 B DT 14 1_555 0.215 0.351 3.625 3.864 0.391 34.076 0.526 0.310 3.631 0.664 -6.566 34.290 3 BB_DG3DA4:DT31DC32_CC B 3 ? C 32 ? B 4 ? C 31 ? 1 A DA 4 1_555 B DT 14 1_555 A DG 5 1_555 B DC 13 1_555 -0.181 0.815 3.341 -0.403 3.509 34.817 0.808 0.238 3.406 5.846 0.671 34.990 4 BB_DA4DG5:DC30DT31_CC B 4 ? C 31 ? B 5 ? C 30 ? 1 A DG 5 1_555 B DC 13 1_555 A DC 6 1_555 B DG 12 1_555 0.474 -0.623 3.387 -3.265 3.509 34.095 -1.610 -1.320 3.250 5.947 5.534 34.421 5 BB_DG5DC6:DG29DC30_CC B 5 ? C 30 ? B 6 ? C 29 ? 1 A DG 8 1_555 B DC 10 1_555 A DG 9 1_555 B DC 9 1_555 0.283 -0.287 4.135 0.502 9.899 31.042 -2.678 -0.395 3.868 17.932 -0.910 32.549 6 BB_DG8DG9:DC26DC27_CC B 8 ? C 27 ? B 9 ? C 26 ? 1 A DG 9 1_555 B DC 9 1_555 A DA 10 1_555 B DT 8 1_555 0.681 -0.008 3.464 -0.197 4.304 32.448 -0.801 -1.244 3.431 7.660 0.351 32.725 7 BB_DG9DA10:DT25DC26_CC B 9 ? C 26 ? B 10 ? C 25 ? 1 A DA 10 1_555 B DT 8 1_555 A DA 11 1_555 B DT 7 1_555 -0.233 0.539 3.658 2.095 4.000 34.439 0.214 0.751 3.675 6.719 -3.520 34.724 8 BB_DA10DA11:DT24DT25_CC B 10 ? C 25 ? B 11 ? C 24 ? 1 A DA 11 1_555 B DT 7 1_555 A DG 12 1_555 B DC 6 1_555 0.039 -0.138 3.343 -5.661 -1.658 34.241 0.029 -0.951 3.298 -2.791 9.527 34.731 9 BB_DA11DG12:DC23DT24_CC B 11 ? C 24 ? B 12 ? C 23 ? 1 A DG 12 1_555 B DC 6 1_555 A DT 13 1_555 B DA 5 1_555 0.010 0.710 4.008 8.176 8.743 35.910 -0.317 1.306 3.976 13.720 -12.829 37.790 10 BB_DG12DT13:DA22DC23_CC B 12 ? C 23 ? B 13 ? C 22 ? 1 A DT 13 1_555 B DA 5 1_555 A DT 14 1_555 B DA 4 1_555 0.072 0.071 3.475 -2.024 3.159 35.540 -0.369 -0.428 3.459 5.157 3.305 35.731 11 BB_DT13DT14:DA21DA22_CC B 13 ? C 22 ? B 14 ? C 21 ? 1 A DT 14 1_555 B DA 4 1_555 A DC 15 1_555 B DG 3 1_555 -0.533 0.522 3.777 -3.615 -6.084 36.881 1.726 0.285 3.682 -9.510 5.651 37.531 12 BB_DT14DC15:DG20DA21_CC B 14 ? C 21 ? B 15 ? C 20 ? 1 A DC 15 1_555 B DG 3 1_555 A DG 16 1_555 B DC 2 1_555 -0.243 1.061 3.997 -0.362 9.627 35.403 0.015 0.323 4.138 15.480 0.583 36.650 13 BB_DC15DG16:DC19DG20_CC B 15 ? C 20 ? B 16 ? C 19 ? 1 A DG 16 1_555 B DC 2 1_555 A DA 17 1_555 B DT 1 1_555 0.627 -0.078 3.419 -0.620 -2.906 31.369 0.422 -1.276 3.399 -5.359 1.143 31.506 14 BB_DG16DA17:DT18DC19_CC B 16 ? C 19 ? B 17 ? C 18 ? #