data_2UP1 # _entry.id 2UP1 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.377 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2UP1 pdb_00002up1 10.2210/pdb2up1/pdb RCSB PD0087 ? ? WWPDB D_1000178722 ? ? # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 2UP1 _pdbx_database_status.recvd_initial_deposition_date 1998-07-10 _pdbx_database_status.deposit_site BNL _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Ding, J.' 1 'Hayashi, M.K.' 2 'Krainer, A.R.' 3 'Xu, R.-M.' 4 # _citation.id primary _citation.title 'Crystal structure of the two-RRM domain of hnRNP A1 (UP1) complexed with single-stranded telomeric DNA.' _citation.journal_abbrev 'Genes Dev.' _citation.journal_volume 13 _citation.page_first 1102 _citation.page_last 1115 _citation.year 1999 _citation.journal_id_ASTM GEDEEP _citation.country US _citation.journal_id_ISSN 0890-9369 _citation.journal_id_CSD 2056 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 10323862 _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Ding, J.' 1 ? primary 'Hayashi, M.K.' 2 ? primary 'Zhang, Y.' 3 ? primary 'Manche, L.' 4 ? primary 'Krainer, A.R.' 5 ? primary 'Xu, R.M.' 6 ? # _cell.entry_id 2UP1 _cell.length_a 51.200 _cell.length_b 51.200 _cell.length_c 171.090 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2UP1 _symmetry.space_group_name_H-M 'P 43 21 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn ;DNA (5'-D(P*TP*AP*GP*GP*GP*TP*TP*AP*GP*GP*G)-3') ; 3469.269 1 ? ? ? ? 2 polymer nat 'PROTEIN (HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN A1)' 20881.520 1 ? ? 'THE TWO RNA-RECOGNITION MOTIF DOMAIN, 1 - 196' ? 3 water nat water 18.015 144 ? ? ? ? # _entity_name_com.entity_id 2 _entity_name_com.name 'HNRNP A1, UP1, HELIX-DESTABILIZING PROTEIN, SINGLE-STRAND BINDING PROTEIN, HNRNP CORE PROTEIN A1' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 polydeoxyribonucleotide no no '(DT)(DA)(DG)(DG)(DG)(DT)(DT)(DA)(DG)(DG)(DG)' TAGGGTTAGGG B ? 2 'polypeptide(L)' no no ;KEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDGRVVEPK RAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKY HTVNGHNCEVRKALSKQEMASAS ; ;KEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDGRVVEPK RAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKY HTVNGHNCEVRKALSKQEMASAS ; A ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 DT n 1 2 DA n 1 3 DG n 1 4 DG n 1 5 DG n 1 6 DT n 1 7 DT n 1 8 DA n 1 9 DG n 1 10 DG n 1 11 DG n 2 1 LYS n 2 2 GLU n 2 3 PRO n 2 4 GLU n 2 5 GLN n 2 6 LEU n 2 7 ARG n 2 8 LYS n 2 9 LEU n 2 10 PHE n 2 11 ILE n 2 12 GLY n 2 13 GLY n 2 14 LEU n 2 15 SER n 2 16 PHE n 2 17 GLU n 2 18 THR n 2 19 THR n 2 20 ASP n 2 21 GLU n 2 22 SER n 2 23 LEU n 2 24 ARG n 2 25 SER n 2 26 HIS n 2 27 PHE n 2 28 GLU n 2 29 GLN n 2 30 TRP n 2 31 GLY n 2 32 THR n 2 33 LEU n 2 34 THR n 2 35 ASP n 2 36 CYS n 2 37 VAL n 2 38 VAL n 2 39 MET n 2 40 ARG n 2 41 ASP n 2 42 PRO n 2 43 ASN n 2 44 THR n 2 45 LYS n 2 46 ARG n 2 47 SER n 2 48 ARG n 2 49 GLY n 2 50 PHE n 2 51 GLY n 2 52 PHE n 2 53 VAL n 2 54 THR n 2 55 TYR n 2 56 ALA n 2 57 THR n 2 58 VAL n 2 59 GLU n 2 60 GLU n 2 61 VAL n 2 62 ASP n 2 63 ALA n 2 64 ALA n 2 65 MET n 2 66 ASN n 2 67 ALA n 2 68 ARG n 2 69 PRO n 2 70 HIS n 2 71 LYS n 2 72 VAL n 2 73 ASP n 2 74 GLY n 2 75 ARG n 2 76 VAL n 2 77 VAL n 2 78 GLU n 2 79 PRO n 2 80 LYS n 2 81 ARG n 2 82 ALA n 2 83 VAL n 2 84 SER n 2 85 ARG n 2 86 GLU n 2 87 ASP n 2 88 SER n 2 89 GLN n 2 90 ARG n 2 91 PRO n 2 92 GLY n 2 93 ALA n 2 94 HIS n 2 95 LEU n 2 96 THR n 2 97 VAL n 2 98 LYS n 2 99 LYS n 2 100 ILE n 2 101 PHE n 2 102 VAL n 2 103 GLY n 2 104 GLY n 2 105 ILE n 2 106 LYS n 2 107 GLU n 2 108 ASP n 2 109 THR n 2 110 GLU n 2 111 GLU n 2 112 HIS n 2 113 HIS n 2 114 LEU n 2 115 ARG n 2 116 ASP n 2 117 TYR n 2 118 PHE n 2 119 GLU n 2 120 GLN n 2 121 TYR n 2 122 GLY n 2 123 LYS n 2 124 ILE n 2 125 GLU n 2 126 VAL n 2 127 ILE n 2 128 GLU n 2 129 ILE n 2 130 MET n 2 131 THR n 2 132 ASP n 2 133 ARG n 2 134 GLY n 2 135 SER n 2 136 GLY n 2 137 LYS n 2 138 LYS n 2 139 ARG n 2 140 GLY n 2 141 PHE n 2 142 ALA n 2 143 PHE n 2 144 VAL n 2 145 THR n 2 146 PHE n 2 147 ASP n 2 148 ASP n 2 149 HIS n 2 150 ASP n 2 151 SER n 2 152 VAL n 2 153 ASP n 2 154 LYS n 2 155 ILE n 2 156 VAL n 2 157 ILE n 2 158 GLN n 2 159 LYS n 2 160 TYR n 2 161 HIS n 2 162 THR n 2 163 VAL n 2 164 ASN n 2 165 GLY n 2 166 HIS n 2 167 ASN n 2 168 CYS n 2 169 GLU n 2 170 VAL n 2 171 ARG n 2 172 LYS n 2 173 ALA n 2 174 LEU n 2 175 SER n 2 176 LYS n 2 177 GLN n 2 178 GLU n 2 179 MET n 2 180 ALA n 2 181 SER n 2 182 ALA n 2 183 SER n # _entity_src_nat.entity_id 2 _entity_src_nat.pdbx_src_id 1 _entity_src_nat.pdbx_alt_source_flag sample _entity_src_nat.pdbx_beg_seq_num ? _entity_src_nat.pdbx_end_seq_num ? _entity_src_nat.common_name human _entity_src_nat.pdbx_organism_scientific 'Homo sapiens' _entity_src_nat.pdbx_ncbi_taxonomy_id 9606 _entity_src_nat.genus Homo _entity_src_nat.species ? _entity_src_nat.strain ? _entity_src_nat.tissue ? _entity_src_nat.tissue_fraction ? _entity_src_nat.pdbx_secretion ? _entity_src_nat.pdbx_fragment ? _entity_src_nat.pdbx_variant ? _entity_src_nat.pdbx_cell_line ? _entity_src_nat.pdbx_atcc ? _entity_src_nat.pdbx_cellular_location ? _entity_src_nat.pdbx_organ ? _entity_src_nat.pdbx_organelle ? _entity_src_nat.pdbx_cell ? _entity_src_nat.pdbx_plasmid_name ? _entity_src_nat.pdbx_plasmid_details ? _entity_src_nat.details ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform 1 UNP ROA1_HUMAN 2 ? ? P09651 ? 2 PDB 2UP1 1 ? ? 2UP1 ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 2UP1 A 1 ? 183 ? P09651 8 ? 190 ? 8 190 2 2 2UP1 B 1 ? 11 ? 2UP1 202 ? 212 ? 202 212 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 2UP1 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.30 _exptl_crystal.density_percent_sol 46.58 _exptl_crystal.description ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method ? _exptl_crystal_grow.temp ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 8.5 _exptl_crystal_grow.pdbx_details 'pH 8.5' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type BRANDEIS _diffrn_detector.pdbx_collection_date ? _diffrn_detector.details MIRRORS # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.15 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'NSLS BEAMLINE X12C' _diffrn_source.pdbx_synchrotron_site NSLS _diffrn_source.pdbx_synchrotron_beamline X12C _diffrn_source.pdbx_wavelength 1.15 _diffrn_source.pdbx_wavelength_list ? # _reflns.entry_id 2UP1 _reflns.observed_criterion_sigma_I ? _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 50. _reflns.d_resolution_high 2.0 _reflns.number_obs 14247 _reflns.number_all ? _reflns.percent_possible_obs 96.1 _reflns.pdbx_Rmerge_I_obs 0.0510000 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 14.2 _reflns.B_iso_Wilson_estimate 10.8 _reflns.pdbx_redundancy 3.8 _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 2.00 _reflns_shell.d_res_low 2.07 _reflns_shell.percent_possible_all 86.5 _reflns_shell.Rmerge_I_obs 0.2180000 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 10. _reflns_shell.pdbx_redundancy 2.6 _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 2UP1 _refine.ls_number_reflns_obs 11767 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 2.0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF 436222.08 _refine.ls_d_res_low 47.7 _refine.ls_d_res_high 2.10 _refine.ls_percent_reflns_obs 83.4 _refine.ls_R_factor_obs 0.1950000 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.1950000 _refine.ls_R_factor_R_free 0.2490000 _refine.ls_R_factor_R_free_error 0.007 _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 10.3 _refine.ls_number_reflns_R_free 1214 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.B_iso_mean 29.2 _refine.aniso_B[1][1] -6.34 _refine.aniso_B[2][2] -6.34 _refine.aniso_B[3][3] 12.67 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'BULK SOLVENT MODEL USED' _refine.pdbx_starting_model 'PDB ENTRY 1UP1' _refine.pdbx_method_to_determine_struct MIRAS _refine.pdbx_isotropic_thermal_model RESTRAINED _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_overall_phase_error ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 2UP1 _refine_analyze.Luzzati_coordinate_error_obs 0.23 _refine_analyze.Luzzati_sigma_a_obs 0.12 _refine_analyze.Luzzati_d_res_low_obs 5.00 _refine_analyze.Luzzati_coordinate_error_free 0.30 _refine_analyze.Luzzati_sigma_a_free 0.25 _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1466 _refine_hist.pdbx_number_atoms_nucleic_acid 234 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 144 _refine_hist.number_atoms_total 1844 _refine_hist.d_res_high 2.10 _refine_hist.d_res_low 47.7 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function c_bond_d 0.005 ? ? ? 'X-RAY DIFFRACTION' ? c_bond_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_bond_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg 1.2 ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d 23.2 ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d 0.81 ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_mcbond_it 1.99 1.50 ? ? 'X-RAY DIFFRACTION' ? c_mcangle_it 2.96 2.00 ? ? 'X-RAY DIFFRACTION' ? c_scbond_it 2.94 2.00 ? ? 'X-RAY DIFFRACTION' ? c_scangle_it 4.06 2.50 ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 6 _refine_ls_shell.d_res_high 2.10 _refine_ls_shell.d_res_low 2.23 _refine_ls_shell.number_reflns_R_work 1303 _refine_ls_shell.R_factor_R_work 0.2250000 _refine_ls_shell.percent_reflns_obs 63.2 _refine_ls_shell.R_factor_R_free 0.2880000 _refine_ls_shell.R_factor_R_free_error 0.024 _refine_ls_shell.percent_reflns_R_free 9.9 _refine_ls_shell.number_reflns_R_free 143 _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? # loop_ _pdbx_xplor_file.serial_no _pdbx_xplor_file.param_file _pdbx_xplor_file.topol_file _pdbx_xplor_file.pdbx_refine_id 1 PROTEIN_REP.PARAM PROTEIN.TOP 'X-RAY DIFFRACTION' 2 DNA-RNA_REP.PARAM DNA-RNA.TOP 'X-RAY DIFFRACTION' 3 WATER_REP.PARAM WATER.TOP 'X-RAY DIFFRACTION' # _struct.entry_id 2UP1 _struct.title 'STRUCTURE OF UP1-TELOMERIC DNA COMPLEX' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2UP1 _struct_keywords.pdbx_keywords 'GENE REGULATION/DNA' _struct_keywords.text 'COMPLEX (RIBONUCLEOPROTEIN-DNA), HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN A1, GENE REGULATION-DNA COMPLEX' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 3 ? # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 GLU B 4 ? ARG B 7 ? GLU A 11 ARG A 14 1 ? 4 HELX_P HELX_P2 2 ASP B 20 ? TRP B 30 ? ASP A 27 TRP A 37 1 ? 11 HELX_P HELX_P3 3 VAL B 58 ? ALA B 67 ? VAL A 65 ALA A 74 1 ? 10 HELX_P HELX_P4 4 ASP B 87 ? GLN B 89 ? ASP A 94 GLN A 96 5 ? 3 HELX_P HELX_P5 5 GLU B 111 ? TYR B 121 ? GLU A 118 TYR A 128 1 ? 11 HELX_P HELX_P6 6 HIS B 149 ? VAL B 156 ? HIS A 156 VAL A 163 1 ? 8 HELX_P HELX_P7 7 LYS B 176 ? SER B 181 ? LYS A 183 SER A 188 1 ? 6 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id ARG _struct_mon_prot_cis.label_seq_id 68 _struct_mon_prot_cis.label_asym_id B _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id ARG _struct_mon_prot_cis.auth_seq_id 75 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 69 _struct_mon_prot_cis.pdbx_label_asym_id_2 B _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 76 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle 0.13 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 4 ? B ? 4 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 GLU B 78 ? ARG B 81 ? GLU A 85 ARG A 88 A 2 LYS B 8 ? GLY B 12 ? LYS A 15 GLY A 19 A 3 PHE B 50 ? TYR B 55 ? PHE A 57 TYR A 62 A 4 LEU B 33 ? MET B 39 ? LEU A 40 MET A 46 B 1 GLU B 169 ? LYS B 172 ? GLU A 176 LYS A 179 B 2 LYS B 99 ? GLY B 103 ? LYS A 106 GLY A 110 B 3 PHE B 141 ? PHE B 146 ? PHE A 148 PHE A 153 B 4 ILE B 124 ? ILE B 129 ? ILE A 131 ILE A 136 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O GLU B 78 ? O GLU A 85 N GLY B 12 ? N GLY A 19 A 2 3 O LEU B 9 ? O LEU A 16 N VAL B 53 ? N VAL A 60 A 3 4 O PHE B 50 ? O PHE A 57 N MET B 39 ? N MET A 46 B 1 2 O GLU B 169 ? O GLU A 176 N GLY B 103 ? N GLY A 110 B 2 3 O ILE B 100 ? O ILE A 107 N VAL B 144 ? N VAL A 151 B 3 4 O PHE B 143 ? O PHE A 150 N GLU B 128 ? N GLU A 135 # _database_PDB_matrix.entry_id 2UP1 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 2UP1 _atom_sites.fract_transf_matrix[1][1] 0.019531 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.019531 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.005845 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 DT 1 202 202 DT T B . n A 1 2 DA 2 203 203 DA A B . n A 1 3 DG 3 204 204 DG G B . n A 1 4 DG 4 205 205 DG G B . n A 1 5 DG 5 206 206 DG G B . n A 1 6 DT 6 207 207 DT T B . n A 1 7 DT 7 208 208 DT T B . n A 1 8 DA 8 209 209 DA A B . n A 1 9 DG 9 210 210 DG G B . n A 1 10 DG 10 211 211 DG G B . n A 1 11 DG 11 212 212 DG G B . n B 2 1 LYS 1 8 8 LYS LYS A . n B 2 2 GLU 2 9 9 GLU GLU A . n B 2 3 PRO 3 10 10 PRO PRO A . n B 2 4 GLU 4 11 11 GLU GLU A . n B 2 5 GLN 5 12 12 GLN GLN A . n B 2 6 LEU 6 13 13 LEU LEU A . n B 2 7 ARG 7 14 14 ARG ARG A . n B 2 8 LYS 8 15 15 LYS LYS A . n B 2 9 LEU 9 16 16 LEU LEU A . n B 2 10 PHE 10 17 17 PHE PHE A . n B 2 11 ILE 11 18 18 ILE ILE A . n B 2 12 GLY 12 19 19 GLY GLY A . n B 2 13 GLY 13 20 20 GLY GLY A . n B 2 14 LEU 14 21 21 LEU LEU A . n B 2 15 SER 15 22 22 SER SER A . n B 2 16 PHE 16 23 23 PHE PHE A . n B 2 17 GLU 17 24 24 GLU GLU A . n B 2 18 THR 18 25 25 THR THR A . n B 2 19 THR 19 26 26 THR THR A . n B 2 20 ASP 20 27 27 ASP ASP A . n B 2 21 GLU 21 28 28 GLU GLU A . n B 2 22 SER 22 29 29 SER SER A . n B 2 23 LEU 23 30 30 LEU LEU A . n B 2 24 ARG 24 31 31 ARG ARG A . n B 2 25 SER 25 32 32 SER SER A . n B 2 26 HIS 26 33 33 HIS HIS A . n B 2 27 PHE 27 34 34 PHE PHE A . n B 2 28 GLU 28 35 35 GLU GLU A . n B 2 29 GLN 29 36 36 GLN GLN A . n B 2 30 TRP 30 37 37 TRP TRP A . n B 2 31 GLY 31 38 38 GLY GLY A . n B 2 32 THR 32 39 39 THR THR A . n B 2 33 LEU 33 40 40 LEU LEU A . n B 2 34 THR 34 41 41 THR THR A . n B 2 35 ASP 35 42 42 ASP ASP A . n B 2 36 CYS 36 43 43 CYS CYS A . n B 2 37 VAL 37 44 44 VAL VAL A . n B 2 38 VAL 38 45 45 VAL VAL A . n B 2 39 MET 39 46 46 MET MET A . n B 2 40 ARG 40 47 47 ARG ARG A . n B 2 41 ASP 41 48 48 ASP ASP A . n B 2 42 PRO 42 49 49 PRO PRO A . n B 2 43 ASN 43 50 50 ASN ASN A . n B 2 44 THR 44 51 51 THR THR A . n B 2 45 LYS 45 52 52 LYS LYS A . n B 2 46 ARG 46 53 53 ARG ARG A . n B 2 47 SER 47 54 54 SER SER A . n B 2 48 ARG 48 55 55 ARG ARG A . n B 2 49 GLY 49 56 56 GLY GLY A . n B 2 50 PHE 50 57 57 PHE PHE A . n B 2 51 GLY 51 58 58 GLY GLY A . n B 2 52 PHE 52 59 59 PHE PHE A . n B 2 53 VAL 53 60 60 VAL VAL A . n B 2 54 THR 54 61 61 THR THR A . n B 2 55 TYR 55 62 62 TYR TYR A . n B 2 56 ALA 56 63 63 ALA ALA A . n B 2 57 THR 57 64 64 THR THR A . n B 2 58 VAL 58 65 65 VAL VAL A . n B 2 59 GLU 59 66 66 GLU GLU A . n B 2 60 GLU 60 67 67 GLU GLU A . n B 2 61 VAL 61 68 68 VAL VAL A . n B 2 62 ASP 62 69 69 ASP ASP A . n B 2 63 ALA 63 70 70 ALA ALA A . n B 2 64 ALA 64 71 71 ALA ALA A . n B 2 65 MET 65 72 72 MET MET A . n B 2 66 ASN 66 73 73 ASN ASN A . n B 2 67 ALA 67 74 74 ALA ALA A . n B 2 68 ARG 68 75 75 ARG ARG A . n B 2 69 PRO 69 76 76 PRO PRO A . n B 2 70 HIS 70 77 77 HIS HIS A . n B 2 71 LYS 71 78 78 LYS LYS A . n B 2 72 VAL 72 79 79 VAL VAL A . n B 2 73 ASP 73 80 80 ASP ASP A . n B 2 74 GLY 74 81 81 GLY GLY A . n B 2 75 ARG 75 82 82 ARG ARG A . n B 2 76 VAL 76 83 83 VAL VAL A . n B 2 77 VAL 77 84 84 VAL VAL A . n B 2 78 GLU 78 85 85 GLU GLU A . n B 2 79 PRO 79 86 86 PRO PRO A . n B 2 80 LYS 80 87 87 LYS LYS A . n B 2 81 ARG 81 88 88 ARG ARG A . n B 2 82 ALA 82 89 89 ALA ALA A . n B 2 83 VAL 83 90 90 VAL VAL A . n B 2 84 SER 84 91 91 SER SER A . n B 2 85 ARG 85 92 92 ARG ARG A . n B 2 86 GLU 86 93 93 GLU GLU A . n B 2 87 ASP 87 94 94 ASP ASP A . n B 2 88 SER 88 95 95 SER SER A . n B 2 89 GLN 89 96 96 GLN GLN A . n B 2 90 ARG 90 97 97 ARG ARG A . n B 2 91 PRO 91 98 98 PRO PRO A . n B 2 92 GLY 92 99 99 GLY GLY A . n B 2 93 ALA 93 100 100 ALA ALA A . n B 2 94 HIS 94 101 101 HIS HIS A . n B 2 95 LEU 95 102 102 LEU LEU A . n B 2 96 THR 96 103 103 THR THR A . n B 2 97 VAL 97 104 104 VAL VAL A . n B 2 98 LYS 98 105 105 LYS LYS A . n B 2 99 LYS 99 106 106 LYS LYS A . n B 2 100 ILE 100 107 107 ILE ILE A . n B 2 101 PHE 101 108 108 PHE PHE A . n B 2 102 VAL 102 109 109 VAL VAL A . n B 2 103 GLY 103 110 110 GLY GLY A . n B 2 104 GLY 104 111 111 GLY GLY A . n B 2 105 ILE 105 112 112 ILE ILE A . n B 2 106 LYS 106 113 113 LYS LYS A . n B 2 107 GLU 107 114 114 GLU GLU A . n B 2 108 ASP 108 115 115 ASP ASP A . n B 2 109 THR 109 116 116 THR THR A . n B 2 110 GLU 110 117 117 GLU GLU A . n B 2 111 GLU 111 118 118 GLU GLU A . n B 2 112 HIS 112 119 119 HIS HIS A . n B 2 113 HIS 113 120 120 HIS HIS A . n B 2 114 LEU 114 121 121 LEU LEU A . n B 2 115 ARG 115 122 122 ARG ARG A . n B 2 116 ASP 116 123 123 ASP ASP A . n B 2 117 TYR 117 124 124 TYR TYR A . n B 2 118 PHE 118 125 125 PHE PHE A . n B 2 119 GLU 119 126 126 GLU GLU A . n B 2 120 GLN 120 127 127 GLN GLN A . n B 2 121 TYR 121 128 128 TYR TYR A . n B 2 122 GLY 122 129 129 GLY GLY A . n B 2 123 LYS 123 130 130 LYS LYS A . n B 2 124 ILE 124 131 131 ILE ILE A . n B 2 125 GLU 125 132 132 GLU GLU A . n B 2 126 VAL 126 133 133 VAL VAL A . n B 2 127 ILE 127 134 134 ILE ILE A . n B 2 128 GLU 128 135 135 GLU GLU A . n B 2 129 ILE 129 136 136 ILE ILE A . n B 2 130 MET 130 137 137 MET MET A . n B 2 131 THR 131 138 138 THR THR A . n B 2 132 ASP 132 139 139 ASP ASP A . n B 2 133 ARG 133 140 140 ARG ARG A . n B 2 134 GLY 134 141 141 GLY GLY A . n B 2 135 SER 135 142 142 SER SER A . n B 2 136 GLY 136 143 143 GLY GLY A . n B 2 137 LYS 137 144 144 LYS LYS A . n B 2 138 LYS 138 145 145 LYS LYS A . n B 2 139 ARG 139 146 146 ARG ARG A . n B 2 140 GLY 140 147 147 GLY GLY A . n B 2 141 PHE 141 148 148 PHE PHE A . n B 2 142 ALA 142 149 149 ALA ALA A . n B 2 143 PHE 143 150 150 PHE PHE A . n B 2 144 VAL 144 151 151 VAL VAL A . n B 2 145 THR 145 152 152 THR THR A . n B 2 146 PHE 146 153 153 PHE PHE A . n B 2 147 ASP 147 154 154 ASP ASP A . n B 2 148 ASP 148 155 155 ASP ASP A . n B 2 149 HIS 149 156 156 HIS HIS A . n B 2 150 ASP 150 157 157 ASP ASP A . n B 2 151 SER 151 158 158 SER SER A . n B 2 152 VAL 152 159 159 VAL VAL A . n B 2 153 ASP 153 160 160 ASP ASP A . n B 2 154 LYS 154 161 161 LYS LYS A . n B 2 155 ILE 155 162 162 ILE ILE A . n B 2 156 VAL 156 163 163 VAL VAL A . n B 2 157 ILE 157 164 164 ILE ILE A . n B 2 158 GLN 158 165 165 GLN GLN A . n B 2 159 LYS 159 166 166 LYS LYS A . n B 2 160 TYR 160 167 167 TYR TYR A . n B 2 161 HIS 161 168 168 HIS HIS A . n B 2 162 THR 162 169 169 THR THR A . n B 2 163 VAL 163 170 170 VAL VAL A . n B 2 164 ASN 164 171 171 ASN ASN A . n B 2 165 GLY 165 172 172 GLY GLY A . n B 2 166 HIS 166 173 173 HIS HIS A . n B 2 167 ASN 167 174 174 ASN ASN A . n B 2 168 CYS 168 175 175 CYS CYS A . n B 2 169 GLU 169 176 176 GLU GLU A . n B 2 170 VAL 170 177 177 VAL VAL A . n B 2 171 ARG 171 178 178 ARG ARG A . n B 2 172 LYS 172 179 179 LYS LYS A . n B 2 173 ALA 173 180 180 ALA ALA A . n B 2 174 LEU 174 181 181 LEU LEU A . n B 2 175 SER 175 182 182 SER SER A . n B 2 176 LYS 176 183 183 LYS LYS A . n B 2 177 GLN 177 184 184 GLN GLN A . n B 2 178 GLU 178 185 185 GLU GLU A . n B 2 179 MET 179 186 186 MET MET A . n B 2 180 ALA 180 187 187 ALA ALA A . n B 2 181 SER 181 188 188 SER SER A . n B 2 182 ALA 182 189 189 ALA ALA A . n B 2 183 SER 183 190 190 SER SER A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 HOH 1 604 604 HOH HOH B . C 3 HOH 2 607 607 HOH HOH B . C 3 HOH 3 619 619 HOH HOH B . C 3 HOH 4 631 631 HOH HOH B . C 3 HOH 5 635 635 HOH HOH B . C 3 HOH 6 644 644 HOH HOH B . C 3 HOH 7 652 652 HOH HOH B . C 3 HOH 8 654 654 HOH HOH B . C 3 HOH 9 673 673 HOH HOH B . C 3 HOH 10 674 674 HOH HOH B . C 3 HOH 11 676 676 HOH HOH B . C 3 HOH 12 678 678 HOH HOH B . C 3 HOH 13 681 681 HOH HOH B . C 3 HOH 14 689 689 HOH HOH B . C 3 HOH 15 692 692 HOH HOH B . C 3 HOH 16 699 699 HOH HOH B . C 3 HOH 17 703 703 HOH HOH B . C 3 HOH 18 704 704 HOH HOH B . C 3 HOH 19 713 713 HOH HOH B . C 3 HOH 20 714 714 HOH HOH B . C 3 HOH 21 716 716 HOH HOH B . C 3 HOH 22 732 732 HOH HOH B . C 3 HOH 23 741 741 HOH HOH B . C 3 HOH 24 745 745 HOH HOH B . C 3 HOH 25 767 767 HOH HOH B . C 3 HOH 26 778 778 HOH HOH B . C 3 HOH 27 790 790 HOH HOH B . C 3 HOH 28 795 795 HOH HOH B . D 3 HOH 1 600 600 HOH HOH A . D 3 HOH 2 601 601 HOH HOH A . D 3 HOH 3 602 602 HOH HOH A . D 3 HOH 4 603 603 HOH HOH A . D 3 HOH 5 605 605 HOH HOH A . D 3 HOH 6 606 606 HOH HOH A . D 3 HOH 7 608 608 HOH HOH A . D 3 HOH 8 609 609 HOH HOH A . D 3 HOH 9 610 610 HOH HOH A . D 3 HOH 10 611 611 HOH HOH A . D 3 HOH 11 612 612 HOH HOH A . D 3 HOH 12 613 613 HOH HOH A . D 3 HOH 13 614 614 HOH HOH A . D 3 HOH 14 615 615 HOH HOH A . D 3 HOH 15 616 616 HOH HOH A . D 3 HOH 16 618 618 HOH HOH A . D 3 HOH 17 620 620 HOH HOH A . D 3 HOH 18 622 622 HOH HOH A . D 3 HOH 19 623 623 HOH HOH A . D 3 HOH 20 624 624 HOH HOH A . D 3 HOH 21 625 625 HOH HOH A . D 3 HOH 22 626 626 HOH HOH A . D 3 HOH 23 627 627 HOH HOH A . D 3 HOH 24 628 628 HOH HOH A . D 3 HOH 25 629 629 HOH HOH A . D 3 HOH 26 630 630 HOH HOH A . D 3 HOH 27 632 632 HOH HOH A . D 3 HOH 28 633 633 HOH HOH A . D 3 HOH 29 634 634 HOH HOH A . D 3 HOH 30 636 636 HOH HOH A . D 3 HOH 31 637 637 HOH HOH A . D 3 HOH 32 638 638 HOH HOH A . D 3 HOH 33 639 639 HOH HOH A . D 3 HOH 34 640 640 HOH HOH A . D 3 HOH 35 641 641 HOH HOH A . D 3 HOH 36 642 642 HOH HOH A . D 3 HOH 37 643 643 HOH HOH A . D 3 HOH 38 645 645 HOH HOH A . D 3 HOH 39 646 646 HOH HOH A . D 3 HOH 40 647 647 HOH HOH A . D 3 HOH 41 648 648 HOH HOH A . D 3 HOH 42 649 649 HOH HOH A . D 3 HOH 43 650 650 HOH HOH A . D 3 HOH 44 651 651 HOH HOH A . D 3 HOH 45 653 653 HOH HOH A . D 3 HOH 46 655 655 HOH HOH A . D 3 HOH 47 656 656 HOH HOH A . D 3 HOH 48 657 657 HOH HOH A . D 3 HOH 49 658 658 HOH HOH A . D 3 HOH 50 659 659 HOH HOH A . D 3 HOH 51 660 660 HOH HOH A . D 3 HOH 52 661 661 HOH HOH A . D 3 HOH 53 662 662 HOH HOH A . D 3 HOH 54 663 663 HOH HOH A . D 3 HOH 55 664 664 HOH HOH A . D 3 HOH 56 665 665 HOH HOH A . D 3 HOH 57 666 666 HOH HOH A . D 3 HOH 58 667 667 HOH HOH A . D 3 HOH 59 669 669 HOH HOH A . D 3 HOH 60 670 670 HOH HOH A . D 3 HOH 61 671 671 HOH HOH A . D 3 HOH 62 672 672 HOH HOH A . D 3 HOH 63 677 677 HOH HOH A . D 3 HOH 64 679 679 HOH HOH A . D 3 HOH 65 683 683 HOH HOH A . D 3 HOH 66 684 684 HOH HOH A . D 3 HOH 67 685 685 HOH HOH A . D 3 HOH 68 686 686 HOH HOH A . D 3 HOH 69 687 687 HOH HOH A . D 3 HOH 70 688 688 HOH HOH A . D 3 HOH 71 690 690 HOH HOH A . D 3 HOH 72 691 691 HOH HOH A . D 3 HOH 73 693 693 HOH HOH A . D 3 HOH 74 694 694 HOH HOH A . D 3 HOH 75 695 695 HOH HOH A . D 3 HOH 76 696 696 HOH HOH A . D 3 HOH 77 697 697 HOH HOH A . D 3 HOH 78 698 698 HOH HOH A . D 3 HOH 79 700 700 HOH HOH A . D 3 HOH 80 701 701 HOH HOH A . D 3 HOH 81 702 702 HOH HOH A . D 3 HOH 82 705 705 HOH HOH A . D 3 HOH 83 706 706 HOH HOH A . D 3 HOH 84 707 707 HOH HOH A . D 3 HOH 85 708 708 HOH HOH A . D 3 HOH 86 709 709 HOH HOH A . D 3 HOH 87 710 710 HOH HOH A . D 3 HOH 88 722 722 HOH HOH A . D 3 HOH 89 723 723 HOH HOH A . D 3 HOH 90 724 724 HOH HOH A . D 3 HOH 91 725 725 HOH HOH A . D 3 HOH 92 726 726 HOH HOH A . D 3 HOH 93 727 727 HOH HOH A . D 3 HOH 94 728 728 HOH HOH A . D 3 HOH 95 731 731 HOH HOH A . D 3 HOH 96 733 733 HOH HOH A . D 3 HOH 97 736 736 HOH HOH A . D 3 HOH 98 748 748 HOH HOH A . D 3 HOH 99 750 750 HOH HOH A . D 3 HOH 100 752 752 HOH HOH A . D 3 HOH 101 754 754 HOH HOH A . D 3 HOH 102 755 755 HOH HOH A . D 3 HOH 103 756 756 HOH HOH A . D 3 HOH 104 759 759 HOH HOH A . D 3 HOH 105 760 760 HOH HOH A . D 3 HOH 106 764 764 HOH HOH A . D 3 HOH 107 766 766 HOH HOH A . D 3 HOH 108 770 770 HOH HOH A . D 3 HOH 109 776 776 HOH HOH A . D 3 HOH 110 777 777 HOH HOH A . D 3 HOH 111 780 780 HOH HOH A . D 3 HOH 112 782 782 HOH HOH A . D 3 HOH 113 783 783 HOH HOH A . D 3 HOH 114 784 784 HOH HOH A . D 3 HOH 115 785 785 HOH HOH A . D 3 HOH 116 788 788 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 1999-11-10 2 'Structure model' 1 1 2008-05-22 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2017-11-22 5 'Structure model' 1 4 2023-08-30 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Refinement description' 4 5 'Structure model' 'Data collection' 5 5 'Structure model' 'Database references' 6 5 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' software 2 5 'Structure model' chem_comp_atom 3 5 'Structure model' chem_comp_bond 4 5 'Structure model' database_2 5 5 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_software.classification' 2 4 'Structure model' '_software.name' 3 5 'Structure model' '_database_2.pdbx_DOI' 4 5 'Structure model' '_database_2.pdbx_database_accession' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal PHASER phasing . ? 1 AMoRE phasing . ? 2 CNS refinement 0.3 ? 3 DENZO 'data reduction' . ? 4 SCALEPACK 'data scaling' . ? 5 PHASES phasing . ? 6 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 CYS A 43 ? ? -162.21 115.20 2 1 LYS A 52 ? ? 66.69 -11.49 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 DA OP3 O N N 88 DA P P N N 89 DA OP1 O N N 90 DA OP2 O N N 91 DA "O5'" O N N 92 DA "C5'" C N N 93 DA "C4'" C N R 94 DA "O4'" O N N 95 DA "C3'" C N S 96 DA "O3'" O N N 97 DA "C2'" C N N 98 DA "C1'" C N R 99 DA N9 N Y N 100 DA C8 C Y N 101 DA N7 N Y N 102 DA C5 C Y N 103 DA C6 C Y N 104 DA N6 N N N 105 DA N1 N Y N 106 DA C2 C Y N 107 DA N3 N Y N 108 DA C4 C Y N 109 DA HOP3 H N N 110 DA HOP2 H N N 111 DA "H5'" H N N 112 DA "H5''" H N N 113 DA "H4'" H N N 114 DA "H3'" H N N 115 DA "HO3'" H N N 116 DA "H2'" H N N 117 DA "H2''" H N N 118 DA "H1'" H N N 119 DA H8 H N N 120 DA H61 H N N 121 DA H62 H N N 122 DA H2 H N N 123 DG OP3 O N N 124 DG P P N N 125 DG OP1 O N N 126 DG OP2 O N N 127 DG "O5'" O N N 128 DG "C5'" C N N 129 DG "C4'" C N R 130 DG "O4'" O N N 131 DG "C3'" C N S 132 DG "O3'" O N N 133 DG "C2'" C N N 134 DG "C1'" C N R 135 DG N9 N Y N 136 DG C8 C Y N 137 DG N7 N Y N 138 DG C5 C Y N 139 DG C6 C N N 140 DG O6 O N N 141 DG N1 N N N 142 DG C2 C N N 143 DG N2 N N N 144 DG N3 N N N 145 DG C4 C Y N 146 DG HOP3 H N N 147 DG HOP2 H N N 148 DG "H5'" H N N 149 DG "H5''" H N N 150 DG "H4'" H N N 151 DG "H3'" H N N 152 DG "HO3'" H N N 153 DG "H2'" H N N 154 DG "H2''" H N N 155 DG "H1'" H N N 156 DG H8 H N N 157 DG H1 H N N 158 DG H21 H N N 159 DG H22 H N N 160 DT OP3 O N N 161 DT P P N N 162 DT OP1 O N N 163 DT OP2 O N N 164 DT "O5'" O N N 165 DT "C5'" C N N 166 DT "C4'" C N R 167 DT "O4'" O N N 168 DT "C3'" C N S 169 DT "O3'" O N N 170 DT "C2'" C N N 171 DT "C1'" C N R 172 DT N1 N N N 173 DT C2 C N N 174 DT O2 O N N 175 DT N3 N N N 176 DT C4 C N N 177 DT O4 O N N 178 DT C5 C N N 179 DT C7 C N N 180 DT C6 C N N 181 DT HOP3 H N N 182 DT HOP2 H N N 183 DT "H5'" H N N 184 DT "H5''" H N N 185 DT "H4'" H N N 186 DT "H3'" H N N 187 DT "HO3'" H N N 188 DT "H2'" H N N 189 DT "H2''" H N N 190 DT "H1'" H N N 191 DT H3 H N N 192 DT H71 H N N 193 DT H72 H N N 194 DT H73 H N N 195 DT H6 H N N 196 GLN N N N N 197 GLN CA C N S 198 GLN C C N N 199 GLN O O N N 200 GLN CB C N N 201 GLN CG C N N 202 GLN CD C N N 203 GLN OE1 O N N 204 GLN NE2 N N N 205 GLN OXT O N N 206 GLN H H N N 207 GLN H2 H N N 208 GLN HA H N N 209 GLN HB2 H N N 210 GLN HB3 H N N 211 GLN HG2 H N N 212 GLN HG3 H N N 213 GLN HE21 H N N 214 GLN HE22 H N N 215 GLN HXT H N N 216 GLU N N N N 217 GLU CA C N S 218 GLU C C N N 219 GLU O O N N 220 GLU CB C N N 221 GLU CG C N N 222 GLU CD C N N 223 GLU OE1 O N N 224 GLU OE2 O N N 225 GLU OXT O N N 226 GLU H H N N 227 GLU H2 H N N 228 GLU HA H N N 229 GLU HB2 H N N 230 GLU HB3 H N N 231 GLU HG2 H N N 232 GLU HG3 H N N 233 GLU HE2 H N N 234 GLU HXT H N N 235 GLY N N N N 236 GLY CA C N N 237 GLY C C N N 238 GLY O O N N 239 GLY OXT O N N 240 GLY H H N N 241 GLY H2 H N N 242 GLY HA2 H N N 243 GLY HA3 H N N 244 GLY HXT H N N 245 HIS N N N N 246 HIS CA C N S 247 HIS C C N N 248 HIS O O N N 249 HIS CB C N N 250 HIS CG C Y N 251 HIS ND1 N Y N 252 HIS CD2 C Y N 253 HIS CE1 C Y N 254 HIS NE2 N Y N 255 HIS OXT O N N 256 HIS H H N N 257 HIS H2 H N N 258 HIS HA H N N 259 HIS HB2 H N N 260 HIS HB3 H N N 261 HIS HD1 H N N 262 HIS HD2 H N N 263 HIS HE1 H N N 264 HIS HE2 H N N 265 HIS HXT H N N 266 HOH O O N N 267 HOH H1 H N N 268 HOH H2 H N N 269 ILE N N N N 270 ILE CA C N S 271 ILE C C N N 272 ILE O O N N 273 ILE CB C N S 274 ILE CG1 C N N 275 ILE CG2 C N N 276 ILE CD1 C N N 277 ILE OXT O N N 278 ILE H H N N 279 ILE H2 H N N 280 ILE HA H N N 281 ILE HB H N N 282 ILE HG12 H N N 283 ILE HG13 H N N 284 ILE HG21 H N N 285 ILE HG22 H N N 286 ILE HG23 H N N 287 ILE HD11 H N N 288 ILE HD12 H N N 289 ILE HD13 H N N 290 ILE HXT H N N 291 LEU N N N N 292 LEU CA C N S 293 LEU C C N N 294 LEU O O N N 295 LEU CB C N N 296 LEU CG C N N 297 LEU CD1 C N N 298 LEU CD2 C N N 299 LEU OXT O N N 300 LEU H H N N 301 LEU H2 H N N 302 LEU HA H N N 303 LEU HB2 H N N 304 LEU HB3 H N N 305 LEU HG H N N 306 LEU HD11 H N N 307 LEU HD12 H N N 308 LEU HD13 H N N 309 LEU HD21 H N N 310 LEU HD22 H N N 311 LEU HD23 H N N 312 LEU HXT H N N 313 LYS N N N N 314 LYS CA C N S 315 LYS C C N N 316 LYS O O N N 317 LYS CB C N N 318 LYS CG C N N 319 LYS CD C N N 320 LYS CE C N N 321 LYS NZ N N N 322 LYS OXT O N N 323 LYS H H N N 324 LYS H2 H N N 325 LYS HA H N N 326 LYS HB2 H N N 327 LYS HB3 H N N 328 LYS HG2 H N N 329 LYS HG3 H N N 330 LYS HD2 H N N 331 LYS HD3 H N N 332 LYS HE2 H N N 333 LYS HE3 H N N 334 LYS HZ1 H N N 335 LYS HZ2 H N N 336 LYS HZ3 H N N 337 LYS HXT H N N 338 MET N N N N 339 MET CA C N S 340 MET C C N N 341 MET O O N N 342 MET CB C N N 343 MET CG C N N 344 MET SD S N N 345 MET CE C N N 346 MET OXT O N N 347 MET H H N N 348 MET H2 H N N 349 MET HA H N N 350 MET HB2 H N N 351 MET HB3 H N N 352 MET HG2 H N N 353 MET HG3 H N N 354 MET HE1 H N N 355 MET HE2 H N N 356 MET HE3 H N N 357 MET HXT H N N 358 PHE N N N N 359 PHE CA C N S 360 PHE C C N N 361 PHE O O N N 362 PHE CB C N N 363 PHE CG C Y N 364 PHE CD1 C Y N 365 PHE CD2 C Y N 366 PHE CE1 C Y N 367 PHE CE2 C Y N 368 PHE CZ C Y N 369 PHE OXT O N N 370 PHE H H N N 371 PHE H2 H N N 372 PHE HA H N N 373 PHE HB2 H N N 374 PHE HB3 H N N 375 PHE HD1 H N N 376 PHE HD2 H N N 377 PHE HE1 H N N 378 PHE HE2 H N N 379 PHE HZ H N N 380 PHE HXT H N N 381 PRO N N N N 382 PRO CA C N S 383 PRO C C N N 384 PRO O O N N 385 PRO CB C N N 386 PRO CG C N N 387 PRO CD C N N 388 PRO OXT O N N 389 PRO H H N N 390 PRO HA H N N 391 PRO HB2 H N N 392 PRO HB3 H N N 393 PRO HG2 H N N 394 PRO HG3 H N N 395 PRO HD2 H N N 396 PRO HD3 H N N 397 PRO HXT H N N 398 SER N N N N 399 SER CA C N S 400 SER C C N N 401 SER O O N N 402 SER CB C N N 403 SER OG O N N 404 SER OXT O N N 405 SER H H N N 406 SER H2 H N N 407 SER HA H N N 408 SER HB2 H N N 409 SER HB3 H N N 410 SER HG H N N 411 SER HXT H N N 412 THR N N N N 413 THR CA C N S 414 THR C C N N 415 THR O O N N 416 THR CB C N R 417 THR OG1 O N N 418 THR CG2 C N N 419 THR OXT O N N 420 THR H H N N 421 THR H2 H N N 422 THR HA H N N 423 THR HB H N N 424 THR HG1 H N N 425 THR HG21 H N N 426 THR HG22 H N N 427 THR HG23 H N N 428 THR HXT H N N 429 TRP N N N N 430 TRP CA C N S 431 TRP C C N N 432 TRP O O N N 433 TRP CB C N N 434 TRP CG C Y N 435 TRP CD1 C Y N 436 TRP CD2 C Y N 437 TRP NE1 N Y N 438 TRP CE2 C Y N 439 TRP CE3 C Y N 440 TRP CZ2 C Y N 441 TRP CZ3 C Y N 442 TRP CH2 C Y N 443 TRP OXT O N N 444 TRP H H N N 445 TRP H2 H N N 446 TRP HA H N N 447 TRP HB2 H N N 448 TRP HB3 H N N 449 TRP HD1 H N N 450 TRP HE1 H N N 451 TRP HE3 H N N 452 TRP HZ2 H N N 453 TRP HZ3 H N N 454 TRP HH2 H N N 455 TRP HXT H N N 456 TYR N N N N 457 TYR CA C N S 458 TYR C C N N 459 TYR O O N N 460 TYR CB C N N 461 TYR CG C Y N 462 TYR CD1 C Y N 463 TYR CD2 C Y N 464 TYR CE1 C Y N 465 TYR CE2 C Y N 466 TYR CZ C Y N 467 TYR OH O N N 468 TYR OXT O N N 469 TYR H H N N 470 TYR H2 H N N 471 TYR HA H N N 472 TYR HB2 H N N 473 TYR HB3 H N N 474 TYR HD1 H N N 475 TYR HD2 H N N 476 TYR HE1 H N N 477 TYR HE2 H N N 478 TYR HH H N N 479 TYR HXT H N N 480 VAL N N N N 481 VAL CA C N S 482 VAL C C N N 483 VAL O O N N 484 VAL CB C N N 485 VAL CG1 C N N 486 VAL CG2 C N N 487 VAL OXT O N N 488 VAL H H N N 489 VAL H2 H N N 490 VAL HA H N N 491 VAL HB H N N 492 VAL HG11 H N N 493 VAL HG12 H N N 494 VAL HG13 H N N 495 VAL HG21 H N N 496 VAL HG22 H N N 497 VAL HG23 H N N 498 VAL HXT H N N 499 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 DA OP3 P sing N N 83 DA OP3 HOP3 sing N N 84 DA P OP1 doub N N 85 DA P OP2 sing N N 86 DA P "O5'" sing N N 87 DA OP2 HOP2 sing N N 88 DA "O5'" "C5'" sing N N 89 DA "C5'" "C4'" sing N N 90 DA "C5'" "H5'" sing N N 91 DA "C5'" "H5''" sing N N 92 DA "C4'" "O4'" sing N N 93 DA "C4'" "C3'" sing N N 94 DA "C4'" "H4'" sing N N 95 DA "O4'" "C1'" sing N N 96 DA "C3'" "O3'" sing N N 97 DA "C3'" "C2'" sing N N 98 DA "C3'" "H3'" sing N N 99 DA "O3'" "HO3'" sing N N 100 DA "C2'" "C1'" sing N N 101 DA "C2'" "H2'" sing N N 102 DA "C2'" "H2''" sing N N 103 DA "C1'" N9 sing N N 104 DA "C1'" "H1'" sing N N 105 DA N9 C8 sing Y N 106 DA N9 C4 sing Y N 107 DA C8 N7 doub Y N 108 DA C8 H8 sing N N 109 DA N7 C5 sing Y N 110 DA C5 C6 sing Y N 111 DA C5 C4 doub Y N 112 DA C6 N6 sing N N 113 DA C6 N1 doub Y N 114 DA N6 H61 sing N N 115 DA N6 H62 sing N N 116 DA N1 C2 sing Y N 117 DA C2 N3 doub Y N 118 DA C2 H2 sing N N 119 DA N3 C4 sing Y N 120 DG OP3 P sing N N 121 DG OP3 HOP3 sing N N 122 DG P OP1 doub N N 123 DG P OP2 sing N N 124 DG P "O5'" sing N N 125 DG OP2 HOP2 sing N N 126 DG "O5'" "C5'" sing N N 127 DG "C5'" "C4'" sing N N 128 DG "C5'" "H5'" sing N N 129 DG "C5'" "H5''" sing N N 130 DG "C4'" "O4'" sing N N 131 DG "C4'" "C3'" sing N N 132 DG "C4'" "H4'" sing N N 133 DG "O4'" "C1'" sing N N 134 DG "C3'" "O3'" sing N N 135 DG "C3'" "C2'" sing N N 136 DG "C3'" "H3'" sing N N 137 DG "O3'" "HO3'" sing N N 138 DG "C2'" "C1'" sing N N 139 DG "C2'" "H2'" sing N N 140 DG "C2'" "H2''" sing N N 141 DG "C1'" N9 sing N N 142 DG "C1'" "H1'" sing N N 143 DG N9 C8 sing Y N 144 DG N9 C4 sing Y N 145 DG C8 N7 doub Y N 146 DG C8 H8 sing N N 147 DG N7 C5 sing Y N 148 DG C5 C6 sing N N 149 DG C5 C4 doub Y N 150 DG C6 O6 doub N N 151 DG C6 N1 sing N N 152 DG N1 C2 sing N N 153 DG N1 H1 sing N N 154 DG C2 N2 sing N N 155 DG C2 N3 doub N N 156 DG N2 H21 sing N N 157 DG N2 H22 sing N N 158 DG N3 C4 sing N N 159 DT OP3 P sing N N 160 DT OP3 HOP3 sing N N 161 DT P OP1 doub N N 162 DT P OP2 sing N N 163 DT P "O5'" sing N N 164 DT OP2 HOP2 sing N N 165 DT "O5'" "C5'" sing N N 166 DT "C5'" "C4'" sing N N 167 DT "C5'" "H5'" sing N N 168 DT "C5'" "H5''" sing N N 169 DT "C4'" "O4'" sing N N 170 DT "C4'" "C3'" sing N N 171 DT "C4'" "H4'" sing N N 172 DT "O4'" "C1'" sing N N 173 DT "C3'" "O3'" sing N N 174 DT "C3'" "C2'" sing N N 175 DT "C3'" "H3'" sing N N 176 DT "O3'" "HO3'" sing N N 177 DT "C2'" "C1'" sing N N 178 DT "C2'" "H2'" sing N N 179 DT "C2'" "H2''" sing N N 180 DT "C1'" N1 sing N N 181 DT "C1'" "H1'" sing N N 182 DT N1 C2 sing N N 183 DT N1 C6 sing N N 184 DT C2 O2 doub N N 185 DT C2 N3 sing N N 186 DT N3 C4 sing N N 187 DT N3 H3 sing N N 188 DT C4 O4 doub N N 189 DT C4 C5 sing N N 190 DT C5 C7 sing N N 191 DT C5 C6 doub N N 192 DT C7 H71 sing N N 193 DT C7 H72 sing N N 194 DT C7 H73 sing N N 195 DT C6 H6 sing N N 196 GLN N CA sing N N 197 GLN N H sing N N 198 GLN N H2 sing N N 199 GLN CA C sing N N 200 GLN CA CB sing N N 201 GLN CA HA sing N N 202 GLN C O doub N N 203 GLN C OXT sing N N 204 GLN CB CG sing N N 205 GLN CB HB2 sing N N 206 GLN CB HB3 sing N N 207 GLN CG CD sing N N 208 GLN CG HG2 sing N N 209 GLN CG HG3 sing N N 210 GLN CD OE1 doub N N 211 GLN CD NE2 sing N N 212 GLN NE2 HE21 sing N N 213 GLN NE2 HE22 sing N N 214 GLN OXT HXT sing N N 215 GLU N CA sing N N 216 GLU N H sing N N 217 GLU N H2 sing N N 218 GLU CA C sing N N 219 GLU CA CB sing N N 220 GLU CA HA sing N N 221 GLU C O doub N N 222 GLU C OXT sing N N 223 GLU CB CG sing N N 224 GLU CB HB2 sing N N 225 GLU CB HB3 sing N N 226 GLU CG CD sing N N 227 GLU CG HG2 sing N N 228 GLU CG HG3 sing N N 229 GLU CD OE1 doub N N 230 GLU CD OE2 sing N N 231 GLU OE2 HE2 sing N N 232 GLU OXT HXT sing N N 233 GLY N CA sing N N 234 GLY N H sing N N 235 GLY N H2 sing N N 236 GLY CA C sing N N 237 GLY CA HA2 sing N N 238 GLY CA HA3 sing N N 239 GLY C O doub N N 240 GLY C OXT sing N N 241 GLY OXT HXT sing N N 242 HIS N CA sing N N 243 HIS N H sing N N 244 HIS N H2 sing N N 245 HIS CA C sing N N 246 HIS CA CB sing N N 247 HIS CA HA sing N N 248 HIS C O doub N N 249 HIS C OXT sing N N 250 HIS CB CG sing N N 251 HIS CB HB2 sing N N 252 HIS CB HB3 sing N N 253 HIS CG ND1 sing Y N 254 HIS CG CD2 doub Y N 255 HIS ND1 CE1 doub Y N 256 HIS ND1 HD1 sing N N 257 HIS CD2 NE2 sing Y N 258 HIS CD2 HD2 sing N N 259 HIS CE1 NE2 sing Y N 260 HIS CE1 HE1 sing N N 261 HIS NE2 HE2 sing N N 262 HIS OXT HXT sing N N 263 HOH O H1 sing N N 264 HOH O H2 sing N N 265 ILE N CA sing N N 266 ILE N H sing N N 267 ILE N H2 sing N N 268 ILE CA C sing N N 269 ILE CA CB sing N N 270 ILE CA HA sing N N 271 ILE C O doub N N 272 ILE C OXT sing N N 273 ILE CB CG1 sing N N 274 ILE CB CG2 sing N N 275 ILE CB HB sing N N 276 ILE CG1 CD1 sing N N 277 ILE CG1 HG12 sing N N 278 ILE CG1 HG13 sing N N 279 ILE CG2 HG21 sing N N 280 ILE CG2 HG22 sing N N 281 ILE CG2 HG23 sing N N 282 ILE CD1 HD11 sing N N 283 ILE CD1 HD12 sing N N 284 ILE CD1 HD13 sing N N 285 ILE OXT HXT sing N N 286 LEU N CA sing N N 287 LEU N H sing N N 288 LEU N H2 sing N N 289 LEU CA C sing N N 290 LEU CA CB sing N N 291 LEU CA HA sing N N 292 LEU C O doub N N 293 LEU C OXT sing N N 294 LEU CB CG sing N N 295 LEU CB HB2 sing N N 296 LEU CB HB3 sing N N 297 LEU CG CD1 sing N N 298 LEU CG CD2 sing N N 299 LEU CG HG sing N N 300 LEU CD1 HD11 sing N N 301 LEU CD1 HD12 sing N N 302 LEU CD1 HD13 sing N N 303 LEU CD2 HD21 sing N N 304 LEU CD2 HD22 sing N N 305 LEU CD2 HD23 sing N N 306 LEU OXT HXT sing N N 307 LYS N CA sing N N 308 LYS N H sing N N 309 LYS N H2 sing N N 310 LYS CA C sing N N 311 LYS CA CB sing N N 312 LYS CA HA sing N N 313 LYS C O doub N N 314 LYS C OXT sing N N 315 LYS CB CG sing N N 316 LYS CB HB2 sing N N 317 LYS CB HB3 sing N N 318 LYS CG CD sing N N 319 LYS CG HG2 sing N N 320 LYS CG HG3 sing N N 321 LYS CD CE sing N N 322 LYS CD HD2 sing N N 323 LYS CD HD3 sing N N 324 LYS CE NZ sing N N 325 LYS CE HE2 sing N N 326 LYS CE HE3 sing N N 327 LYS NZ HZ1 sing N N 328 LYS NZ HZ2 sing N N 329 LYS NZ HZ3 sing N N 330 LYS OXT HXT sing N N 331 MET N CA sing N N 332 MET N H sing N N 333 MET N H2 sing N N 334 MET CA C sing N N 335 MET CA CB sing N N 336 MET CA HA sing N N 337 MET C O doub N N 338 MET C OXT sing N N 339 MET CB CG sing N N 340 MET CB HB2 sing N N 341 MET CB HB3 sing N N 342 MET CG SD sing N N 343 MET CG HG2 sing N N 344 MET CG HG3 sing N N 345 MET SD CE sing N N 346 MET CE HE1 sing N N 347 MET CE HE2 sing N N 348 MET CE HE3 sing N N 349 MET OXT HXT sing N N 350 PHE N CA sing N N 351 PHE N H sing N N 352 PHE N H2 sing N N 353 PHE CA C sing N N 354 PHE CA CB sing N N 355 PHE CA HA sing N N 356 PHE C O doub N N 357 PHE C OXT sing N N 358 PHE CB CG sing N N 359 PHE CB HB2 sing N N 360 PHE CB HB3 sing N N 361 PHE CG CD1 doub Y N 362 PHE CG CD2 sing Y N 363 PHE CD1 CE1 sing Y N 364 PHE CD1 HD1 sing N N 365 PHE CD2 CE2 doub Y N 366 PHE CD2 HD2 sing N N 367 PHE CE1 CZ doub Y N 368 PHE CE1 HE1 sing N N 369 PHE CE2 CZ sing Y N 370 PHE CE2 HE2 sing N N 371 PHE CZ HZ sing N N 372 PHE OXT HXT sing N N 373 PRO N CA sing N N 374 PRO N CD sing N N 375 PRO N H sing N N 376 PRO CA C sing N N 377 PRO CA CB sing N N 378 PRO CA HA sing N N 379 PRO C O doub N N 380 PRO C OXT sing N N 381 PRO CB CG sing N N 382 PRO CB HB2 sing N N 383 PRO CB HB3 sing N N 384 PRO CG CD sing N N 385 PRO CG HG2 sing N N 386 PRO CG HG3 sing N N 387 PRO CD HD2 sing N N 388 PRO CD HD3 sing N N 389 PRO OXT HXT sing N N 390 SER N CA sing N N 391 SER N H sing N N 392 SER N H2 sing N N 393 SER CA C sing N N 394 SER CA CB sing N N 395 SER CA HA sing N N 396 SER C O doub N N 397 SER C OXT sing N N 398 SER CB OG sing N N 399 SER CB HB2 sing N N 400 SER CB HB3 sing N N 401 SER OG HG sing N N 402 SER OXT HXT sing N N 403 THR N CA sing N N 404 THR N H sing N N 405 THR N H2 sing N N 406 THR CA C sing N N 407 THR CA CB sing N N 408 THR CA HA sing N N 409 THR C O doub N N 410 THR C OXT sing N N 411 THR CB OG1 sing N N 412 THR CB CG2 sing N N 413 THR CB HB sing N N 414 THR OG1 HG1 sing N N 415 THR CG2 HG21 sing N N 416 THR CG2 HG22 sing N N 417 THR CG2 HG23 sing N N 418 THR OXT HXT sing N N 419 TRP N CA sing N N 420 TRP N H sing N N 421 TRP N H2 sing N N 422 TRP CA C sing N N 423 TRP CA CB sing N N 424 TRP CA HA sing N N 425 TRP C O doub N N 426 TRP C OXT sing N N 427 TRP CB CG sing N N 428 TRP CB HB2 sing N N 429 TRP CB HB3 sing N N 430 TRP CG CD1 doub Y N 431 TRP CG CD2 sing Y N 432 TRP CD1 NE1 sing Y N 433 TRP CD1 HD1 sing N N 434 TRP CD2 CE2 doub Y N 435 TRP CD2 CE3 sing Y N 436 TRP NE1 CE2 sing Y N 437 TRP NE1 HE1 sing N N 438 TRP CE2 CZ2 sing Y N 439 TRP CE3 CZ3 doub Y N 440 TRP CE3 HE3 sing N N 441 TRP CZ2 CH2 doub Y N 442 TRP CZ2 HZ2 sing N N 443 TRP CZ3 CH2 sing Y N 444 TRP CZ3 HZ3 sing N N 445 TRP CH2 HH2 sing N N 446 TRP OXT HXT sing N N 447 TYR N CA sing N N 448 TYR N H sing N N 449 TYR N H2 sing N N 450 TYR CA C sing N N 451 TYR CA CB sing N N 452 TYR CA HA sing N N 453 TYR C O doub N N 454 TYR C OXT sing N N 455 TYR CB CG sing N N 456 TYR CB HB2 sing N N 457 TYR CB HB3 sing N N 458 TYR CG CD1 doub Y N 459 TYR CG CD2 sing Y N 460 TYR CD1 CE1 sing Y N 461 TYR CD1 HD1 sing N N 462 TYR CD2 CE2 doub Y N 463 TYR CD2 HD2 sing N N 464 TYR CE1 CZ doub Y N 465 TYR CE1 HE1 sing N N 466 TYR CE2 CZ sing Y N 467 TYR CE2 HE2 sing N N 468 TYR CZ OH sing N N 469 TYR OH HH sing N N 470 TYR OXT HXT sing N N 471 VAL N CA sing N N 472 VAL N H sing N N 473 VAL N H2 sing N N 474 VAL CA C sing N N 475 VAL CA CB sing N N 476 VAL CA HA sing N N 477 VAL C O doub N N 478 VAL C OXT sing N N 479 VAL CB CG1 sing N N 480 VAL CB CG2 sing N N 481 VAL CB HB sing N N 482 VAL CG1 HG11 sing N N 483 VAL CG1 HG12 sing N N 484 VAL CG1 HG13 sing N N 485 VAL CG2 HG21 sing N N 486 VAL CG2 HG22 sing N N 487 VAL CG2 HG23 sing N N 488 VAL OXT HXT sing N N 489 # _pdbx_entity_nonpoly.entity_id 3 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1UP1 _pdbx_initial_refinement_model.details 'PDB ENTRY 1UP1' #