data_2V5E # _entry.id 2V5E # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.382 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2V5E pdb_00002v5e 10.2210/pdb2v5e/pdb PDBE EBI-35222 ? ? WWPDB D_1290035222 ? ? # _pdbx_database_related.db_name PDB _pdbx_database_related.db_id 1AGQ _pdbx_database_related.content_type unspecified _pdbx_database_related.details 'GLIAL CELL-DERIVED NEUROTROPHIC FACTOR FROM RAT' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 2V5E _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.SG_entry . _pdbx_database_status.recvd_initial_deposition_date 2008-10-03 _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Parkash, V.' 1 'Leppanen, V.-M.' 2 'Virtanen, H.' 3 'Jurvansuu, J.-M.' 4 'Bespalov, M.M.' 5 'Sidorova, Y.A.' 6 'Runeberg-Roos, P.' 7 'Saarma, M.' 8 'Goldman, A.' 9 # _citation.id primary _citation.title ;The Structure of the Glial Cell Line-Derived Neurotrophic Factor-Coreceptor Complex: Insights Into Ret Signaling and Heparin Binding. ; _citation.journal_abbrev J.Biol.Chem. _citation.journal_volume 283 _citation.page_first 35164 _citation.page_last ? _citation.year 2008 _citation.journal_id_ASTM JBCHA3 _citation.country US _citation.journal_id_ISSN 0021-9258 _citation.journal_id_CSD 0071 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 18845535 _citation.pdbx_database_id_DOI 10.1074/JBC.M802543200 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Parkash, V.' 1 ? primary 'Leppanen, V.-M.' 2 ? primary 'Virtanen, H.' 3 ? primary 'Jurvansuu, J.-M.' 4 ? primary 'Bespalov, M.M.' 5 ? primary 'Sidorova, Y.A.' 6 ? primary 'Runeberg-Roos, P.' 7 ? primary 'Saarma, M.' 8 ? primary 'Goldman, A.' 9 ? # _cell.entry_id 2V5E _cell.length_a 58.900 _cell.length_b 75.700 _cell.length_c 105.500 _cell.angle_alpha 90.00 _cell.angle_beta 91.90 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2V5E _symmetry.space_group_name_H-M 'C 1 2 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'GDNF FAMILY RECEPTOR ALPHA-1' 22538.631 1 ? ? 'RESIDUES 150-349' ? 2 polymer man 'GLIAL CELL LINE-DERIVED NEUROTROPHIC FACTOR' 11430.114 1 ? ? 'RESIDUES 111-211' ? 3 branched man '1,3,4,6-tetra-O-sulfo-beta-D-fructofuranose-(2-1)-2,3,4,6-tetra-O-sulfonato-alpha-D-glucopyranose' 982.803 1 ? ? ? ? 4 non-polymer syn 1,2-ETHANEDIOL 62.068 4 ? ? ? ? 5 non-polymer man 2-acetamido-2-deoxy-beta-D-glucopyranose 221.208 1 ? ? ? ? 6 water nat water 18.015 223 ? ? ? ? # loop_ _entity_name_com.entity_id _entity_name_com.name 1 'GFR-ALPHA-1, GDNF RECEPTOR ALPHA, GDNFR-ALPHA, TGF-BETA-RELATED NEUROTROPHIC FACTOR RECEPTOR 1, RET LIGAND 1' 2 'ASTROCYTE-DERIVED TROPHIC FACTOR, HGDNF, ATF' 3 'sucrose octasulfate' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;KGNNCLDAAKACNLDDTCKKYRSAYITPCTTSMSNEVCNRRKCHKALRQFFDKVPAKHSYGMLFCSCRDIACTERRRQTI VPVCSYEERERPNCLSLQDSCKTNYICRSRLADFFTNCQPESRSVSNCLKENYADCLLAYSGLIGTVMTPNYVDSSSLSV APWCDCSNSGNDLEDCLKFLNFFKDNTCLKNAIQAFGNGS ; ;KGNNCLDAAKACNLDDTCKKYRSAYITPCTTSMSNEVCNRRKCHKALRQFFDKVPAKHSYGMLFCSCRDIACTERRRQTI VPVCSYEERERPNCLSLQDSCKTNYICRSRLADFFTNCQPESRSVSNCLKENYADCLLAYSGLIGTVMTPNYVDSSSLSV APWCDCSNSGNDLEDCLKFLNFFKDNTCLKNAIQAFGNGS ; A ? 2 'polypeptide(L)' no no ;QRGKNRGCVLTAIHLNVTDLGLGYETKEELIFRYCSGSCDAAETTYDKILKNLSRNRRLVSDKVGQACCRPIAFDDDLSF LDDNLVYHILRKHSAKRCGCI ; ;QRGKNRGCVLTAIHLNVTDLGLGYETKEELIFRYCSGSCDAAETTYDKILKNLSRNRRLVSDKVGQACCRPIAFDDDLSF LDDNLVYHILRKHSAKRCGCI ; B ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 LYS n 1 2 GLY n 1 3 ASN n 1 4 ASN n 1 5 CYS n 1 6 LEU n 1 7 ASP n 1 8 ALA n 1 9 ALA n 1 10 LYS n 1 11 ALA n 1 12 CYS n 1 13 ASN n 1 14 LEU n 1 15 ASP n 1 16 ASP n 1 17 THR n 1 18 CYS n 1 19 LYS n 1 20 LYS n 1 21 TYR n 1 22 ARG n 1 23 SER n 1 24 ALA n 1 25 TYR n 1 26 ILE n 1 27 THR n 1 28 PRO n 1 29 CYS n 1 30 THR n 1 31 THR n 1 32 SER n 1 33 MET n 1 34 SER n 1 35 ASN n 1 36 GLU n 1 37 VAL n 1 38 CYS n 1 39 ASN n 1 40 ARG n 1 41 ARG n 1 42 LYS n 1 43 CYS n 1 44 HIS n 1 45 LYS n 1 46 ALA n 1 47 LEU n 1 48 ARG n 1 49 GLN n 1 50 PHE n 1 51 PHE n 1 52 ASP n 1 53 LYS n 1 54 VAL n 1 55 PRO n 1 56 ALA n 1 57 LYS n 1 58 HIS n 1 59 SER n 1 60 TYR n 1 61 GLY n 1 62 MET n 1 63 LEU n 1 64 PHE n 1 65 CYS n 1 66 SER n 1 67 CYS n 1 68 ARG n 1 69 ASP n 1 70 ILE n 1 71 ALA n 1 72 CYS n 1 73 THR n 1 74 GLU n 1 75 ARG n 1 76 ARG n 1 77 ARG n 1 78 GLN n 1 79 THR n 1 80 ILE n 1 81 VAL n 1 82 PRO n 1 83 VAL n 1 84 CYS n 1 85 SER n 1 86 TYR n 1 87 GLU n 1 88 GLU n 1 89 ARG n 1 90 GLU n 1 91 ARG n 1 92 PRO n 1 93 ASN n 1 94 CYS n 1 95 LEU n 1 96 SER n 1 97 LEU n 1 98 GLN n 1 99 ASP n 1 100 SER n 1 101 CYS n 1 102 LYS n 1 103 THR n 1 104 ASN n 1 105 TYR n 1 106 ILE n 1 107 CYS n 1 108 ARG n 1 109 SER n 1 110 ARG n 1 111 LEU n 1 112 ALA n 1 113 ASP n 1 114 PHE n 1 115 PHE n 1 116 THR n 1 117 ASN n 1 118 CYS n 1 119 GLN n 1 120 PRO n 1 121 GLU n 1 122 SER n 1 123 ARG n 1 124 SER n 1 125 VAL n 1 126 SER n 1 127 ASN n 1 128 CYS n 1 129 LEU n 1 130 LYS n 1 131 GLU n 1 132 ASN n 1 133 TYR n 1 134 ALA n 1 135 ASP n 1 136 CYS n 1 137 LEU n 1 138 LEU n 1 139 ALA n 1 140 TYR n 1 141 SER n 1 142 GLY n 1 143 LEU n 1 144 ILE n 1 145 GLY n 1 146 THR n 1 147 VAL n 1 148 MET n 1 149 THR n 1 150 PRO n 1 151 ASN n 1 152 TYR n 1 153 VAL n 1 154 ASP n 1 155 SER n 1 156 SER n 1 157 SER n 1 158 LEU n 1 159 SER n 1 160 VAL n 1 161 ALA n 1 162 PRO n 1 163 TRP n 1 164 CYS n 1 165 ASP n 1 166 CYS n 1 167 SER n 1 168 ASN n 1 169 SER n 1 170 GLY n 1 171 ASN n 1 172 ASP n 1 173 LEU n 1 174 GLU n 1 175 ASP n 1 176 CYS n 1 177 LEU n 1 178 LYS n 1 179 PHE n 1 180 LEU n 1 181 ASN n 1 182 PHE n 1 183 PHE n 1 184 LYS n 1 185 ASP n 1 186 ASN n 1 187 THR n 1 188 CYS n 1 189 LEU n 1 190 LYS n 1 191 ASN n 1 192 ALA n 1 193 ILE n 1 194 GLN n 1 195 ALA n 1 196 PHE n 1 197 GLY n 1 198 ASN n 1 199 GLY n 1 200 SER n 2 1 GLN n 2 2 ARG n 2 3 GLY n 2 4 LYS n 2 5 ASN n 2 6 ARG n 2 7 GLY n 2 8 CYS n 2 9 VAL n 2 10 LEU n 2 11 THR n 2 12 ALA n 2 13 ILE n 2 14 HIS n 2 15 LEU n 2 16 ASN n 2 17 VAL n 2 18 THR n 2 19 ASP n 2 20 LEU n 2 21 GLY n 2 22 LEU n 2 23 GLY n 2 24 TYR n 2 25 GLU n 2 26 THR n 2 27 LYS n 2 28 GLU n 2 29 GLU n 2 30 LEU n 2 31 ILE n 2 32 PHE n 2 33 ARG n 2 34 TYR n 2 35 CYS n 2 36 SER n 2 37 GLY n 2 38 SER n 2 39 CYS n 2 40 ASP n 2 41 ALA n 2 42 ALA n 2 43 GLU n 2 44 THR n 2 45 THR n 2 46 TYR n 2 47 ASP n 2 48 LYS n 2 49 ILE n 2 50 LEU n 2 51 LYS n 2 52 ASN n 2 53 LEU n 2 54 SER n 2 55 ARG n 2 56 ASN n 2 57 ARG n 2 58 ARG n 2 59 LEU n 2 60 VAL n 2 61 SER n 2 62 ASP n 2 63 LYS n 2 64 VAL n 2 65 GLY n 2 66 GLN n 2 67 ALA n 2 68 CYS n 2 69 CYS n 2 70 ARG n 2 71 PRO n 2 72 ILE n 2 73 ALA n 2 74 PHE n 2 75 ASP n 2 76 ASP n 2 77 ASP n 2 78 LEU n 2 79 SER n 2 80 PHE n 2 81 LEU n 2 82 ASP n 2 83 ASP n 2 84 ASN n 2 85 LEU n 2 86 VAL n 2 87 TYR n 2 88 HIS n 2 89 ILE n 2 90 LEU n 2 91 ARG n 2 92 LYS n 2 93 HIS n 2 94 SER n 2 95 ALA n 2 96 LYS n 2 97 ARG n 2 98 CYS n 2 99 GLY n 2 100 CYS n 2 101 ILE n # loop_ _entity_src_gen.entity_id _entity_src_gen.pdbx_src_id _entity_src_gen.pdbx_alt_source_flag _entity_src_gen.pdbx_seq_type _entity_src_gen.pdbx_beg_seq_num _entity_src_gen.pdbx_end_seq_num _entity_src_gen.gene_src_common_name _entity_src_gen.gene_src_genus _entity_src_gen.pdbx_gene_src_gene _entity_src_gen.gene_src_species _entity_src_gen.gene_src_strain _entity_src_gen.gene_src_tissue _entity_src_gen.gene_src_tissue_fraction _entity_src_gen.gene_src_details _entity_src_gen.pdbx_gene_src_fragment _entity_src_gen.pdbx_gene_src_scientific_name _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id _entity_src_gen.pdbx_gene_src_variant _entity_src_gen.pdbx_gene_src_cell_line _entity_src_gen.pdbx_gene_src_atcc _entity_src_gen.pdbx_gene_src_organ _entity_src_gen.pdbx_gene_src_organelle _entity_src_gen.pdbx_gene_src_cell _entity_src_gen.pdbx_gene_src_cellular_location _entity_src_gen.host_org_common_name _entity_src_gen.pdbx_host_org_scientific_name _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id _entity_src_gen.host_org_genus _entity_src_gen.pdbx_host_org_gene _entity_src_gen.pdbx_host_org_organ _entity_src_gen.host_org_species _entity_src_gen.pdbx_host_org_tissue _entity_src_gen.pdbx_host_org_tissue_fraction _entity_src_gen.pdbx_host_org_strain _entity_src_gen.pdbx_host_org_variant _entity_src_gen.pdbx_host_org_cell_line _entity_src_gen.pdbx_host_org_atcc _entity_src_gen.pdbx_host_org_culture_collection _entity_src_gen.pdbx_host_org_cell _entity_src_gen.pdbx_host_org_organelle _entity_src_gen.pdbx_host_org_cellular_location _entity_src_gen.pdbx_host_org_vector_type _entity_src_gen.pdbx_host_org_vector _entity_src_gen.host_org_details _entity_src_gen.expression_system_id _entity_src_gen.plasmid_name _entity_src_gen.plasmid_details _entity_src_gen.pdbx_description 1 1 sample ? ? ? 'NORWAY RAT' ? ? ? ? ? ? ? ? 'RATTUS NORVEGICUS' 10116 ? ? ? ? ? ? ? ? 'SPODOPTERA FRUGIPERDA; EXPRESSION_SYSTEM_COMMON_FALL ARMYWORM' 7108 ? ? ? ? ? ? ? ? SF9 ? ? ? ? ? BACULOVIRUS ? ? ? PFASTBAC ? ? 2 1 sample ? ? ? HUMAN ? ? ? ? ? ? ? ? 'HOMO SAPIENS' 9606 ? ? ? ? ? ? ? ? 'SPODOPTERA FRUGIPERDA; EXPRESSION_SYSTEM_COMMON_FALL ARMYWORM' 7108 ? ? ? ? ? ? ? ? SF9 ? ? ? ? ? BACULOVIRUS ? ? ? PFASTBAC ? ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform 1 UNP GFRA1_RAT 1 ? ? Q62997 ? 2 UNP GDNF_HUMAN 2 ? ? P39905 ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 2V5E A 1 ? 200 ? Q62997 150 ? 349 ? 150 349 2 2 2V5E B 1 ? 101 ? P39905 111 ? 211 ? 34 134 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 EDO non-polymer . 1,2-ETHANEDIOL 'ETHYLENE GLYCOL' 'C2 H6 O2' 62.068 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 GU4 'D-saccharide, alpha linking' n 2,3,4,6-tetra-O-sulfonato-alpha-D-glucopyranose '2,3,4,6-tetra-O-sulfonato-alpha-D-glucose; 2,3,4,6-tetra-O-sulfonato-D-glucose; 2,3,4,6-tetra-O-sulfonato-glucose' 'C6 H12 O18 S4' 500.409 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 NAG 'D-saccharide, beta linking' . 2-acetamido-2-deoxy-beta-D-glucopyranose ;N-acetyl-beta-D-glucosamine; 2-acetamido-2-deoxy-beta-D-glucose; 2-acetamido-2-deoxy-D-glucose; 2-acetamido-2-deoxy-glucose; N-ACETYL-D-GLUCOSAMINE ; 'C8 H15 N O6' 221.208 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 YYJ 'D-saccharide, beta linking' n 1,3,4,6-tetra-O-sulfo-beta-D-fructofuranose ? 'C6 H12 O18 S4' 500.409 # _exptl.entry_id 2V5E _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.35 _exptl_crystal.density_percent_sol 48 _exptl_crystal.description NONE # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method ? _exptl_crystal_grow.temp ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.5 _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details '100MM HEPES PH7.5, 10% PEG-8K, 8% ETHYLENE GLYCOL' # _diffrn.id 1 _diffrn.ambient_temp 190 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC CCD' _diffrn_detector.pdbx_collection_date 2006-09-06 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.933000 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'ESRF BEAMLINE ID14-2' _diffrn_source.pdbx_synchrotron_site ESRF _diffrn_source.pdbx_synchrotron_beamline ID14-2 _diffrn_source.pdbx_wavelength 0.933000 _diffrn_source.pdbx_wavelength_list ? # _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.entry_id 2V5E _reflns.observed_criterion_sigma_I -3.0 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 20.00 _reflns.d_resolution_high 2.35 _reflns.number_obs 19071 _reflns.number_all ? _reflns.percent_possible_obs 98.2 _reflns.pdbx_Rmerge_I_obs 0.08 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 16.00 _reflns.B_iso_Wilson_estimate 35.00 _reflns.pdbx_redundancy 3.5 # _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_ordinal 1 _reflns_shell.d_res_high 2.35 _reflns_shell.d_res_low 2.45 _reflns_shell.percent_possible_all 87.0 _reflns_shell.Rmerge_I_obs 0.29 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 4.29 _reflns_shell.pdbx_redundancy 2.5 # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 2V5E _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 18089 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 20.00 _refine.ls_d_res_high 2.35 _refine.ls_percent_reflns_obs 98.4 _refine.ls_R_factor_obs 0.187 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.184 _refine.ls_R_factor_R_free 0.237 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.100 _refine.ls_number_reflns_R_free 981 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.940 _refine.correlation_coeff_Fo_to_Fc_free 0.909 _refine.B_iso_mean 26.91 _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ;HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS. BECAUSE OF POOR ELECTRON DENSITY, FOLLOWING RESIDUES ATOMS WERE MISSING: ARG A 238 CG CD NE CZ NH1 NH2 LYS B 96 CG CD CE NZ ; _refine.pdbx_starting_model 'PDB ENTRIES 1AGQ CHAIN A, 2GH0 CHAIN A' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.265 _refine.pdbx_overall_ESU_R_Free 0.219 _refine.overall_SU_ML 0.138 _refine.pdbx_overall_phase_error ? _refine.overall_SU_B 5.822 _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2348 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 85 _refine_hist.number_atoms_solvent 223 _refine_hist.number_atoms_total 2656 _refine_hist.d_res_high 2.35 _refine_hist.d_res_low 20.00 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.011 0.022 ? 2490 'X-RAY DIFFRACTION' ? r_bond_other_d ? ? ? ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.206 1.992 ? 3374 'X-RAY DIFFRACTION' ? r_angle_other_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 5.496 5.000 ? 301 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 34.563 23.565 ? 115 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 13.813 15.000 ? 425 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 14.883 15.000 ? 22 'X-RAY DIFFRACTION' ? r_chiral_restr 0.082 0.200 ? 378 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.004 0.021 ? 1822 'X-RAY DIFFRACTION' ? r_gen_planes_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 2.127 2.000 ? 1501 'X-RAY DIFFRACTION' ? r_mcbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcangle_it 3.484 3.000 ? 2412 'X-RAY DIFFRACTION' ? r_mcangle_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_scbond_it 2.314 2.000 ? 989 'X-RAY DIFFRACTION' ? r_scbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_scangle_it 3.415 3.000 ? 961 'X-RAY DIFFRACTION' ? r_scangle_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_long_range_B_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_long_range_B_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 2.35 _refine_ls_shell.d_res_low 2.41 _refine_ls_shell.number_reflns_R_work 1108 _refine_ls_shell.R_factor_R_work 0.2470 _refine_ls_shell.percent_reflns_obs ? _refine_ls_shell.R_factor_R_free 0.3360 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 51 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? # _struct.entry_id 2V5E _struct.title 'The structure of the GDNF:Coreceptor complex: Insights into RET signalling and heparin binding.' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2V5E _struct_keywords.pdbx_keywords 'RECEPTOR/GLYCOPROTEIN COMPLEX' _struct_keywords.text ;RECEPTOR-GLYCOPROTEIN COMPLEX, ALTERNATIVE SPLICING, CELL MEMBRANE, GROWTH FACTOR, LIGAND-CORECEPTOR, GPI-ANCHOR, LIPOPROTEIN, POLYMORPHISM, GLYCOPROTEIN, MEMBRANE, RECEPTOR, SECRETED, GFRALPHA1, CLEAVAGE ON PAIR OF BASIC RESIDUES, RECEPTOR-GLYCOPROTEIN COMPLEX complex ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 4 ? F N N 4 ? G N N 4 ? H N N 5 ? I N N 6 ? J N N 6 ? # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ASN A 3 ? LEU A 14 ? ASN A 152 LEU A 163 1 ? 12 HELX_P HELX_P2 2 ASP A 15 ? THR A 31 ? ASP A 164 THR A 180 1 ? 17 HELX_P HELX_P3 3 ASN A 39 ? VAL A 54 ? ASN A 188 VAL A 203 1 ? 16 HELX_P HELX_P4 4 PRO A 55 ? CYS A 65 ? PRO A 204 CYS A 214 1 ? 11 HELX_P HELX_P5 5 ASP A 69 ? GLN A 78 ? ASP A 218 GLN A 227 1 ? 10 HELX_P HELX_P6 6 VAL A 81 ? TYR A 86 ? VAL A 230 TYR A 235 1 ? 6 HELX_P HELX_P7 7 ASN A 93 ? THR A 103 ? ASN A 242 THR A 252 1 ? 11 HELX_P HELX_P8 8 ASN A 104 ? CYS A 118 ? ASN A 253 CYS A 267 1 ? 15 HELX_P HELX_P9 9 ASN A 132 ? LEU A 143 ? ASN A 281 LEU A 292 1 ? 12 HELX_P HELX_P10 10 SER A 169 ? ASN A 171 ? SER A 318 ASN A 320 5 ? 3 HELX_P HELX_P11 11 ASP A 172 ? ASP A 185 ? ASP A 321 ASP A 334 1 ? 14 HELX_P HELX_P12 12 ASN A 186 ? GLY A 199 ? ASN A 335 GLY A 348 1 ? 14 HELX_P HELX_P13 13 THR B 18 ? GLY B 21 ? THR B 51 GLY B 54 5 ? 4 HELX_P HELX_P14 14 THR B 44 ? ASN B 56 ? THR B 77 ASN B 89 1 ? 13 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 5 SG ? ? ? 1_555 A CYS 65 SG ? ? A CYS 154 A CYS 214 1_555 ? ? ? ? ? ? ? 2.021 ? ? disulf2 disulf ? ? A CYS 12 SG ? ? ? 1_555 A CYS 18 SG ? ? A CYS 161 A CYS 167 1_555 ? ? ? ? ? ? ? 2.040 ? ? disulf3 disulf ? ? A CYS 29 SG ? ? ? 1_555 A CYS 43 SG ? ? A CYS 178 A CYS 192 1_555 ? ? ? ? ? ? ? 2.028 ? ? disulf4 disulf ? ? A CYS 38 SG ? ? ? 1_555 A CYS 84 SG ? ? A CYS 187 A CYS 233 1_555 ? ? ? ? ? ? ? 2.020 ? ? disulf5 disulf ? ? A CYS 67 SG ? ? ? 1_555 A CYS 72 SG ? ? A CYS 216 A CYS 221 1_555 ? ? ? ? ? ? ? 2.052 ? ? disulf6 disulf ? ? A CYS 94 SG ? ? ? 1_555 A CYS 164 SG ? ? A CYS 243 A CYS 313 1_555 ? ? ? ? ? ? ? 2.059 ? ? disulf7 disulf ? ? A CYS 101 SG ? ? ? 1_555 A CYS 107 SG ? ? A CYS 250 A CYS 256 1_555 ? ? ? ? ? ? ? 2.053 ? ? disulf8 disulf ? ? A CYS 118 SG ? ? ? 1_555 A CYS 136 SG ? ? A CYS 267 A CYS 285 1_555 ? ? ? ? ? ? ? 2.051 ? ? disulf9 disulf ? ? A CYS 128 SG ? ? ? 1_555 A CYS 188 SG ? ? A CYS 277 A CYS 337 1_555 ? ? ? ? ? ? ? 2.034 ? ? disulf10 disulf ? ? A CYS 166 SG ? ? ? 1_555 A CYS 176 SG ? ? A CYS 315 A CYS 325 1_555 ? ? ? ? ? ? ? 2.059 ? ? disulf11 disulf ? ? B CYS 8 SG ? ? ? 1_555 B CYS 69 SG ? ? B CYS 41 B CYS 102 1_555 ? ? ? ? ? ? ? 2.034 ? ? disulf12 disulf ? ? B CYS 35 SG ? ? ? 1_555 B CYS 98 SG ? ? B CYS 68 B CYS 131 1_555 ? ? ? ? ? ? ? 2.035 ? ? disulf13 disulf ? ? B CYS 39 SG ? ? ? 1_555 B CYS 100 SG ? ? B CYS 72 B CYS 133 1_555 ? ? ? ? ? ? ? 2.033 ? ? covale1 covale both ? C GU4 . C1 ? ? ? 1_555 C YYJ . O2 ? ? C GU4 1 C YYJ 2 1_555 ? ? ? ? ? ? ? 1.462 sing ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? covale ? ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA ? 2 ? BA ? 2 ? BB ? 2 ? BC ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA 1 2 ? anti-parallel BA 1 2 ? anti-parallel BB 1 2 ? anti-parallel BC 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA 1 PRO A 150 ? TYR A 152 ? PRO A 299 TYR A 301 AA 2 VAL A 160 ? PRO A 162 ? VAL A 309 PRO A 311 BA 1 VAL B 9 ? ASN B 16 ? VAL B 42 ASN B 49 BA 2 GLU B 29 ? SER B 36 ? GLU B 62 SER B 69 BB 1 CYS B 68 ? PHE B 74 ? CYS B 101 PHE B 107 BB 2 ALA B 95 ? ILE B 101 ? ALA B 128 ILE B 134 BC 1 LEU B 78 ? LEU B 81 ? LEU B 111 LEU B 114 BC 2 TYR B 87 ? LEU B 90 ? TYR B 120 LEU B 123 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA 1 2 N ASN A 151 ? N ASN A 300 O ALA A 161 ? O ALA A 310 BA 1 2 N LEU B 15 ? N LEU B 48 O LEU B 30 ? O LEU B 63 BB 1 2 O ALA B 73 ? O ALA B 106 N LYS B 96 ? N LYS B 129 BC 1 2 N PHE B 80 ? N PHE B 113 O HIS B 88 ? O HIS B 121 # _database_PDB_matrix.entry_id 2V5E _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 2V5E _atom_sites.fract_transf_matrix[1][1] 0.016978 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000563 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.013210 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.009484 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 LYS 1 150 150 LYS LYS A . n A 1 2 GLY 2 151 151 GLY GLY A . n A 1 3 ASN 3 152 152 ASN ASN A . n A 1 4 ASN 4 153 153 ASN ASN A . n A 1 5 CYS 5 154 154 CYS CYS A . n A 1 6 LEU 6 155 155 LEU LEU A . n A 1 7 ASP 7 156 156 ASP ASP A . n A 1 8 ALA 8 157 157 ALA ALA A . n A 1 9 ALA 9 158 158 ALA ALA A . n A 1 10 LYS 10 159 159 LYS LYS A . n A 1 11 ALA 11 160 160 ALA ALA A . n A 1 12 CYS 12 161 161 CYS CYS A . n A 1 13 ASN 13 162 162 ASN ASN A . n A 1 14 LEU 14 163 163 LEU LEU A . n A 1 15 ASP 15 164 164 ASP ASP A . n A 1 16 ASP 16 165 165 ASP ASP A . n A 1 17 THR 17 166 166 THR THR A . n A 1 18 CYS 18 167 167 CYS CYS A . n A 1 19 LYS 19 168 168 LYS LYS A . n A 1 20 LYS 20 169 169 LYS LYS A . n A 1 21 TYR 21 170 170 TYR TYR A . n A 1 22 ARG 22 171 171 ARG ARG A . n A 1 23 SER 23 172 172 SER SER A . n A 1 24 ALA 24 173 173 ALA ALA A . n A 1 25 TYR 25 174 174 TYR TYR A . n A 1 26 ILE 26 175 175 ILE ILE A . n A 1 27 THR 27 176 176 THR THR A . n A 1 28 PRO 28 177 177 PRO PRO A . n A 1 29 CYS 29 178 178 CYS CYS A . n A 1 30 THR 30 179 179 THR THR A . n A 1 31 THR 31 180 180 THR THR A . n A 1 32 SER 32 181 181 SER SER A . n A 1 33 MET 33 182 182 MET MET A . n A 1 34 SER 34 183 183 SER SER A . n A 1 35 ASN 35 184 184 ASN ASN A . n A 1 36 GLU 36 185 185 GLU GLU A . n A 1 37 VAL 37 186 186 VAL VAL A . n A 1 38 CYS 38 187 187 CYS CYS A . n A 1 39 ASN 39 188 188 ASN ASN A . n A 1 40 ARG 40 189 189 ARG ARG A . n A 1 41 ARG 41 190 190 ARG ARG A . n A 1 42 LYS 42 191 191 LYS LYS A . n A 1 43 CYS 43 192 192 CYS CYS A . n A 1 44 HIS 44 193 193 HIS HIS A . n A 1 45 LYS 45 194 194 LYS LYS A . n A 1 46 ALA 46 195 195 ALA ALA A . n A 1 47 LEU 47 196 196 LEU LEU A . n A 1 48 ARG 48 197 197 ARG ARG A . n A 1 49 GLN 49 198 198 GLN GLN A . n A 1 50 PHE 50 199 199 PHE PHE A . n A 1 51 PHE 51 200 200 PHE PHE A . n A 1 52 ASP 52 201 201 ASP ASP A . n A 1 53 LYS 53 202 202 LYS LYS A . n A 1 54 VAL 54 203 203 VAL VAL A . n A 1 55 PRO 55 204 204 PRO PRO A . n A 1 56 ALA 56 205 205 ALA ALA A . n A 1 57 LYS 57 206 206 LYS LYS A . n A 1 58 HIS 58 207 207 HIS HIS A . n A 1 59 SER 59 208 208 SER SER A . n A 1 60 TYR 60 209 209 TYR TYR A . n A 1 61 GLY 61 210 210 GLY GLY A . n A 1 62 MET 62 211 211 MET MET A . n A 1 63 LEU 63 212 212 LEU LEU A . n A 1 64 PHE 64 213 213 PHE PHE A . n A 1 65 CYS 65 214 214 CYS CYS A . n A 1 66 SER 66 215 215 SER SER A . n A 1 67 CYS 67 216 216 CYS CYS A . n A 1 68 ARG 68 217 217 ARG ARG A . n A 1 69 ASP 69 218 218 ASP ASP A . n A 1 70 ILE 70 219 219 ILE ILE A . n A 1 71 ALA 71 220 220 ALA ALA A . n A 1 72 CYS 72 221 221 CYS CYS A . n A 1 73 THR 73 222 222 THR THR A . n A 1 74 GLU 74 223 223 GLU GLU A . n A 1 75 ARG 75 224 224 ARG ARG A . n A 1 76 ARG 76 225 225 ARG ARG A . n A 1 77 ARG 77 226 226 ARG ARG A . n A 1 78 GLN 78 227 227 GLN GLN A . n A 1 79 THR 79 228 228 THR THR A . n A 1 80 ILE 80 229 229 ILE ILE A . n A 1 81 VAL 81 230 230 VAL VAL A . n A 1 82 PRO 82 231 231 PRO PRO A . n A 1 83 VAL 83 232 232 VAL VAL A . n A 1 84 CYS 84 233 233 CYS CYS A . n A 1 85 SER 85 234 234 SER SER A . n A 1 86 TYR 86 235 235 TYR TYR A . n A 1 87 GLU 87 236 236 GLU GLU A . n A 1 88 GLU 88 237 237 GLU GLU A . n A 1 89 ARG 89 238 238 ARG ARG A . n A 1 90 GLU 90 239 239 GLU GLU A . n A 1 91 ARG 91 240 240 ARG ARG A . n A 1 92 PRO 92 241 241 PRO PRO A . n A 1 93 ASN 93 242 242 ASN ASN A . n A 1 94 CYS 94 243 243 CYS CYS A . n A 1 95 LEU 95 244 244 LEU LEU A . n A 1 96 SER 96 245 245 SER SER A . n A 1 97 LEU 97 246 246 LEU LEU A . n A 1 98 GLN 98 247 247 GLN GLN A . n A 1 99 ASP 99 248 248 ASP ASP A . n A 1 100 SER 100 249 249 SER SER A . n A 1 101 CYS 101 250 250 CYS CYS A . n A 1 102 LYS 102 251 251 LYS LYS A . n A 1 103 THR 103 252 252 THR THR A . n A 1 104 ASN 104 253 253 ASN ASN A . n A 1 105 TYR 105 254 254 TYR TYR A . n A 1 106 ILE 106 255 255 ILE ILE A . n A 1 107 CYS 107 256 256 CYS CYS A . n A 1 108 ARG 108 257 257 ARG ARG A . n A 1 109 SER 109 258 258 SER SER A . n A 1 110 ARG 110 259 259 ARG ARG A . n A 1 111 LEU 111 260 260 LEU LEU A . n A 1 112 ALA 112 261 261 ALA ALA A . n A 1 113 ASP 113 262 262 ASP ASP A . n A 1 114 PHE 114 263 263 PHE PHE A . n A 1 115 PHE 115 264 264 PHE PHE A . n A 1 116 THR 116 265 265 THR THR A . n A 1 117 ASN 117 266 266 ASN ASN A . n A 1 118 CYS 118 267 267 CYS CYS A . n A 1 119 GLN 119 268 268 GLN GLN A . n A 1 120 PRO 120 269 269 PRO PRO A . n A 1 121 GLU 121 270 270 GLU GLU A . n A 1 122 SER 122 271 271 SER SER A . n A 1 123 ARG 123 272 272 ARG ARG A . n A 1 124 SER 124 273 273 SER SER A . n A 1 125 VAL 125 274 274 VAL VAL A . n A 1 126 SER 126 275 275 SER SER A . n A 1 127 ASN 127 276 276 ASN ASN A . n A 1 128 CYS 128 277 277 CYS CYS A . n A 1 129 LEU 129 278 278 LEU LEU A . n A 1 130 LYS 130 279 279 LYS LYS A . n A 1 131 GLU 131 280 280 GLU GLU A . n A 1 132 ASN 132 281 281 ASN ASN A . n A 1 133 TYR 133 282 282 TYR TYR A . n A 1 134 ALA 134 283 283 ALA ALA A . n A 1 135 ASP 135 284 284 ASP ASP A . n A 1 136 CYS 136 285 285 CYS CYS A . n A 1 137 LEU 137 286 286 LEU LEU A . n A 1 138 LEU 138 287 287 LEU LEU A . n A 1 139 ALA 139 288 288 ALA ALA A . n A 1 140 TYR 140 289 289 TYR TYR A . n A 1 141 SER 141 290 290 SER SER A . n A 1 142 GLY 142 291 291 GLY GLY A . n A 1 143 LEU 143 292 292 LEU LEU A . n A 1 144 ILE 144 293 293 ILE ILE A . n A 1 145 GLY 145 294 294 GLY GLY A . n A 1 146 THR 146 295 295 THR THR A . n A 1 147 VAL 147 296 296 VAL VAL A . n A 1 148 MET 148 297 297 MET MET A . n A 1 149 THR 149 298 298 THR THR A . n A 1 150 PRO 150 299 299 PRO PRO A . n A 1 151 ASN 151 300 300 ASN ASN A . n A 1 152 TYR 152 301 301 TYR TYR A . n A 1 153 VAL 153 302 302 VAL VAL A . n A 1 154 ASP 154 303 303 ASP ASP A . n A 1 155 SER 155 304 304 SER SER A . n A 1 156 SER 156 305 305 SER SER A . n A 1 157 SER 157 306 306 SER SER A . n A 1 158 LEU 158 307 307 LEU LEU A . n A 1 159 SER 159 308 308 SER SER A . n A 1 160 VAL 160 309 309 VAL VAL A . n A 1 161 ALA 161 310 310 ALA ALA A . n A 1 162 PRO 162 311 311 PRO PRO A . n A 1 163 TRP 163 312 312 TRP TRP A . n A 1 164 CYS 164 313 313 CYS CYS A . n A 1 165 ASP 165 314 314 ASP ASP A . n A 1 166 CYS 166 315 315 CYS CYS A . n A 1 167 SER 167 316 316 SER SER A . n A 1 168 ASN 168 317 317 ASN ASN A . n A 1 169 SER 169 318 318 SER SER A . n A 1 170 GLY 170 319 319 GLY GLY A . n A 1 171 ASN 171 320 320 ASN ASN A . n A 1 172 ASP 172 321 321 ASP ASP A . n A 1 173 LEU 173 322 322 LEU LEU A . n A 1 174 GLU 174 323 323 GLU GLU A . n A 1 175 ASP 175 324 324 ASP ASP A . n A 1 176 CYS 176 325 325 CYS CYS A . n A 1 177 LEU 177 326 326 LEU LEU A . n A 1 178 LYS 178 327 327 LYS LYS A . n A 1 179 PHE 179 328 328 PHE PHE A . n A 1 180 LEU 180 329 329 LEU LEU A . n A 1 181 ASN 181 330 330 ASN ASN A . n A 1 182 PHE 182 331 331 PHE PHE A . n A 1 183 PHE 183 332 332 PHE PHE A . n A 1 184 LYS 184 333 333 LYS LYS A . n A 1 185 ASP 185 334 334 ASP ASP A . n A 1 186 ASN 186 335 335 ASN ASN A . n A 1 187 THR 187 336 336 THR THR A . n A 1 188 CYS 188 337 337 CYS CYS A . n A 1 189 LEU 189 338 338 LEU LEU A . n A 1 190 LYS 190 339 339 LYS LYS A . n A 1 191 ASN 191 340 340 ASN ASN A . n A 1 192 ALA 192 341 341 ALA ALA A . n A 1 193 ILE 193 342 342 ILE ILE A . n A 1 194 GLN 194 343 343 GLN GLN A . n A 1 195 ALA 195 344 344 ALA ALA A . n A 1 196 PHE 196 345 345 PHE PHE A . n A 1 197 GLY 197 346 346 GLY GLY A . n A 1 198 ASN 198 347 347 ASN ASN A . n A 1 199 GLY 199 348 348 GLY GLY A . n A 1 200 SER 200 349 349 SER SER A . n B 2 1 GLN 1 34 34 GLN GLN B . n B 2 2 ARG 2 35 35 ARG ARG B . n B 2 3 GLY 3 36 36 GLY GLY B . n B 2 4 LYS 4 37 37 LYS LYS B . n B 2 5 ASN 5 38 38 ASN ASN B . n B 2 6 ARG 6 39 39 ARG ARG B . n B 2 7 GLY 7 40 40 GLY GLY B . n B 2 8 CYS 8 41 41 CYS CYS B . n B 2 9 VAL 9 42 42 VAL VAL B . n B 2 10 LEU 10 43 43 LEU LEU B . n B 2 11 THR 11 44 44 THR THR B . n B 2 12 ALA 12 45 45 ALA ALA B . n B 2 13 ILE 13 46 46 ILE ILE B . n B 2 14 HIS 14 47 47 HIS HIS B . n B 2 15 LEU 15 48 48 LEU LEU B . n B 2 16 ASN 16 49 49 ASN ASN B . n B 2 17 VAL 17 50 50 VAL VAL B . n B 2 18 THR 18 51 51 THR THR B . n B 2 19 ASP 19 52 52 ASP ASP B . n B 2 20 LEU 20 53 53 LEU LEU B . n B 2 21 GLY 21 54 54 GLY GLY B . n B 2 22 LEU 22 55 55 LEU LEU B . n B 2 23 GLY 23 56 56 GLY GLY B . n B 2 24 TYR 24 57 57 TYR TYR B . n B 2 25 GLU 25 58 58 GLU GLU B . n B 2 26 THR 26 59 59 THR THR B . n B 2 27 LYS 27 60 60 LYS LYS B . n B 2 28 GLU 28 61 61 GLU GLU B . n B 2 29 GLU 29 62 62 GLU GLU B . n B 2 30 LEU 30 63 63 LEU LEU B . n B 2 31 ILE 31 64 64 ILE ILE B . n B 2 32 PHE 32 65 65 PHE PHE B . n B 2 33 ARG 33 66 66 ARG ARG B . n B 2 34 TYR 34 67 67 TYR TYR B . n B 2 35 CYS 35 68 68 CYS CYS B . n B 2 36 SER 36 69 69 SER SER B . n B 2 37 GLY 37 70 70 GLY GLY B . n B 2 38 SER 38 71 71 SER SER B . n B 2 39 CYS 39 72 72 CYS CYS B . n B 2 40 ASP 40 73 73 ASP ASP B . n B 2 41 ALA 41 74 74 ALA ALA B . n B 2 42 ALA 42 75 75 ALA ALA B . n B 2 43 GLU 43 76 76 GLU GLU B . n B 2 44 THR 44 77 77 THR THR B . n B 2 45 THR 45 78 78 THR THR B . n B 2 46 TYR 46 79 79 TYR TYR B . n B 2 47 ASP 47 80 80 ASP ASP B . n B 2 48 LYS 48 81 81 LYS LYS B . n B 2 49 ILE 49 82 82 ILE ILE B . n B 2 50 LEU 50 83 83 LEU LEU B . n B 2 51 LYS 51 84 84 LYS LYS B . n B 2 52 ASN 52 85 85 ASN ASN B . n B 2 53 LEU 53 86 86 LEU LEU B . n B 2 54 SER 54 87 87 SER SER B . n B 2 55 ARG 55 88 88 ARG ARG B . n B 2 56 ASN 56 89 89 ASN ASN B . n B 2 57 ARG 57 90 90 ARG ARG B . n B 2 58 ARG 58 91 91 ARG ARG B . n B 2 59 LEU 59 92 92 LEU LEU B . n B 2 60 VAL 60 93 93 VAL VAL B . n B 2 61 SER 61 94 94 SER SER B . n B 2 62 ASP 62 95 95 ASP ASP B . n B 2 63 LYS 63 96 96 LYS LYS B . n B 2 64 VAL 64 97 97 VAL VAL B . n B 2 65 GLY 65 98 98 GLY GLY B . n B 2 66 GLN 66 99 99 GLN GLN B . n B 2 67 ALA 67 100 100 ALA ALA B . n B 2 68 CYS 68 101 101 CYS CYS B . n B 2 69 CYS 69 102 102 CYS CYS B . n B 2 70 ARG 70 103 103 ARG ARG B . n B 2 71 PRO 71 104 104 PRO PRO B . n B 2 72 ILE 72 105 105 ILE ILE B . n B 2 73 ALA 73 106 106 ALA ALA B . n B 2 74 PHE 74 107 107 PHE PHE B . n B 2 75 ASP 75 108 108 ASP ASP B . n B 2 76 ASP 76 109 109 ASP ASP B . n B 2 77 ASP 77 110 110 ASP ASP B . n B 2 78 LEU 78 111 111 LEU LEU B . n B 2 79 SER 79 112 112 SER SER B . n B 2 80 PHE 80 113 113 PHE PHE B . n B 2 81 LEU 81 114 114 LEU LEU B . n B 2 82 ASP 82 115 115 ASP ASP B . n B 2 83 ASP 83 116 116 ASP ASP B . n B 2 84 ASN 84 117 117 ASN ASN B . n B 2 85 LEU 85 118 118 LEU LEU B . n B 2 86 VAL 86 119 119 VAL VAL B . n B 2 87 TYR 87 120 120 TYR TYR B . n B 2 88 HIS 88 121 121 HIS HIS B . n B 2 89 ILE 89 122 122 ILE ILE B . n B 2 90 LEU 90 123 123 LEU LEU B . n B 2 91 ARG 91 124 124 ARG ARG B . n B 2 92 LYS 92 125 125 LYS LYS B . n B 2 93 HIS 93 126 126 HIS HIS B . n B 2 94 SER 94 127 127 SER SER B . n B 2 95 ALA 95 128 128 ALA ALA B . n B 2 96 LYS 96 129 129 LYS LYS B . n B 2 97 ARG 97 130 130 ARG ARG B . n B 2 98 CYS 98 131 131 CYS CYS B . n B 2 99 GLY 99 132 132 GLY GLY B . n B 2 100 CYS 100 133 133 CYS CYS B . n B 2 101 ILE 101 134 134 ILE ILE B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 EDO 1 1351 1351 EDO EDO A . E 4 EDO 1 1352 1352 EDO EDO A . F 4 EDO 1 1353 1353 EDO EDO A . G 4 EDO 1 1354 1354 EDO EDO A . H 5 NAG 1 1135 1135 NAG NAG B . I 6 HOH 1 2001 2001 HOH HOH A . I 6 HOH 2 2002 2002 HOH HOH A . I 6 HOH 3 2003 2003 HOH HOH A . I 6 HOH 4 2004 2004 HOH HOH A . I 6 HOH 5 2005 2005 HOH HOH A . I 6 HOH 6 2006 2006 HOH HOH A . I 6 HOH 7 2007 2007 HOH HOH A . I 6 HOH 8 2008 2008 HOH HOH A . I 6 HOH 9 2009 2009 HOH HOH A . I 6 HOH 10 2010 2010 HOH HOH A . I 6 HOH 11 2011 2011 HOH HOH A . I 6 HOH 12 2012 2012 HOH HOH A . I 6 HOH 13 2013 2013 HOH HOH A . I 6 HOH 14 2014 2014 HOH HOH A . I 6 HOH 15 2015 2015 HOH HOH A . I 6 HOH 16 2016 2016 HOH HOH A . I 6 HOH 17 2017 2017 HOH HOH A . I 6 HOH 18 2018 2018 HOH HOH A . I 6 HOH 19 2019 2019 HOH HOH A . I 6 HOH 20 2020 2020 HOH HOH A . I 6 HOH 21 2021 2021 HOH HOH A . I 6 HOH 22 2022 2022 HOH HOH A . I 6 HOH 23 2023 2023 HOH HOH A . I 6 HOH 24 2024 2024 HOH HOH A . I 6 HOH 25 2025 2025 HOH HOH A . I 6 HOH 26 2026 2026 HOH HOH A . I 6 HOH 27 2027 2027 HOH HOH A . I 6 HOH 28 2028 2028 HOH HOH A . I 6 HOH 29 2029 2029 HOH HOH A . I 6 HOH 30 2030 2030 HOH HOH A . I 6 HOH 31 2031 2031 HOH HOH A . I 6 HOH 32 2032 2032 HOH HOH A . I 6 HOH 33 2033 2033 HOH HOH A . I 6 HOH 34 2034 2034 HOH HOH A . I 6 HOH 35 2035 2035 HOH HOH A . I 6 HOH 36 2036 2036 HOH HOH A . I 6 HOH 37 2037 2037 HOH HOH A . I 6 HOH 38 2038 2038 HOH HOH A . I 6 HOH 39 2039 2039 HOH HOH A . I 6 HOH 40 2040 2040 HOH HOH A . I 6 HOH 41 2041 2041 HOH HOH A . I 6 HOH 42 2042 2042 HOH HOH A . I 6 HOH 43 2043 2043 HOH HOH A . I 6 HOH 44 2044 2044 HOH HOH A . I 6 HOH 45 2045 2045 HOH HOH A . I 6 HOH 46 2046 2046 HOH HOH A . I 6 HOH 47 2047 2047 HOH HOH A . I 6 HOH 48 2048 2048 HOH HOH A . I 6 HOH 49 2049 2049 HOH HOH A . I 6 HOH 50 2050 2050 HOH HOH A . I 6 HOH 51 2051 2051 HOH HOH A . I 6 HOH 52 2052 2052 HOH HOH A . I 6 HOH 53 2053 2053 HOH HOH A . I 6 HOH 54 2054 2054 HOH HOH A . I 6 HOH 55 2055 2055 HOH HOH A . I 6 HOH 56 2056 2056 HOH HOH A . I 6 HOH 57 2057 2057 HOH HOH A . I 6 HOH 58 2058 2058 HOH HOH A . I 6 HOH 59 2059 2059 HOH HOH A . I 6 HOH 60 2060 2060 HOH HOH A . I 6 HOH 61 2061 2061 HOH HOH A . I 6 HOH 62 2062 2062 HOH HOH A . I 6 HOH 63 2063 2063 HOH HOH A . I 6 HOH 64 2064 2064 HOH HOH A . I 6 HOH 65 2065 2065 HOH HOH A . I 6 HOH 66 2066 2066 HOH HOH A . I 6 HOH 67 2067 2067 HOH HOH A . I 6 HOH 68 2068 2068 HOH HOH A . I 6 HOH 69 2069 2069 HOH HOH A . I 6 HOH 70 2070 2070 HOH HOH A . I 6 HOH 71 2071 2071 HOH HOH A . I 6 HOH 72 2072 2072 HOH HOH A . I 6 HOH 73 2073 2073 HOH HOH A . I 6 HOH 74 2074 2074 HOH HOH A . I 6 HOH 75 2075 2075 HOH HOH A . I 6 HOH 76 2076 2076 HOH HOH A . I 6 HOH 77 2077 2077 HOH HOH A . I 6 HOH 78 2078 2078 HOH HOH A . I 6 HOH 79 2079 2079 HOH HOH A . I 6 HOH 80 2080 2080 HOH HOH A . I 6 HOH 81 2081 2081 HOH HOH A . I 6 HOH 82 2082 2082 HOH HOH A . I 6 HOH 83 2083 2083 HOH HOH A . I 6 HOH 84 2084 2084 HOH HOH A . I 6 HOH 85 2085 2085 HOH HOH A . I 6 HOH 86 2086 2086 HOH HOH A . I 6 HOH 87 2087 2087 HOH HOH A . I 6 HOH 88 2088 2088 HOH HOH A . I 6 HOH 89 2089 2089 HOH HOH A . I 6 HOH 90 2090 2090 HOH HOH A . I 6 HOH 91 2091 2091 HOH HOH A . I 6 HOH 92 2092 2092 HOH HOH A . I 6 HOH 93 2093 2093 HOH HOH A . I 6 HOH 94 2094 2094 HOH HOH A . I 6 HOH 95 2095 2095 HOH HOH A . I 6 HOH 96 2096 2096 HOH HOH A . I 6 HOH 97 2097 2097 HOH HOH A . I 6 HOH 98 2098 2098 HOH HOH A . I 6 HOH 99 2099 2099 HOH HOH A . I 6 HOH 100 2100 2100 HOH HOH A . I 6 HOH 101 2101 2101 HOH HOH A . I 6 HOH 102 2102 2102 HOH HOH A . I 6 HOH 103 2103 2103 HOH HOH A . I 6 HOH 104 2104 2104 HOH HOH A . I 6 HOH 105 2105 2105 HOH HOH A . I 6 HOH 106 2106 2106 HOH HOH A . I 6 HOH 107 2107 2107 HOH HOH A . I 6 HOH 108 2108 2108 HOH HOH A . I 6 HOH 109 2109 2109 HOH HOH A . I 6 HOH 110 2110 2110 HOH HOH A . I 6 HOH 111 2111 2111 HOH HOH A . I 6 HOH 112 2112 2112 HOH HOH A . I 6 HOH 113 2113 2113 HOH HOH A . I 6 HOH 114 2114 2114 HOH HOH A . I 6 HOH 115 2115 2115 HOH HOH A . I 6 HOH 116 2116 2116 HOH HOH A . I 6 HOH 117 2117 2117 HOH HOH A . I 6 HOH 118 2118 2118 HOH HOH A . I 6 HOH 119 2119 2119 HOH HOH A . I 6 HOH 120 2120 2120 HOH HOH A . I 6 HOH 121 2121 2121 HOH HOH A . I 6 HOH 122 2122 2122 HOH HOH A . I 6 HOH 123 2123 2123 HOH HOH A . I 6 HOH 124 2124 2124 HOH HOH A . I 6 HOH 125 2125 2125 HOH HOH A . I 6 HOH 126 2126 2126 HOH HOH A . I 6 HOH 127 2127 2127 HOH HOH A . I 6 HOH 128 2128 2128 HOH HOH A . I 6 HOH 129 2129 2129 HOH HOH A . I 6 HOH 130 2130 2130 HOH HOH A . J 6 HOH 1 2001 2001 HOH HOH B . J 6 HOH 2 2002 2002 HOH HOH B . J 6 HOH 3 2003 2003 HOH HOH B . J 6 HOH 4 2004 2004 HOH HOH B . J 6 HOH 5 2005 2005 HOH HOH B . J 6 HOH 6 2006 2006 HOH HOH B . J 6 HOH 7 2007 2007 HOH HOH B . J 6 HOH 8 2008 2008 HOH HOH B . J 6 HOH 9 2009 2009 HOH HOH B . J 6 HOH 10 2010 2010 HOH HOH B . J 6 HOH 11 2011 2011 HOH HOH B . J 6 HOH 12 2012 2012 HOH HOH B . J 6 HOH 13 2013 2013 HOH HOH B . J 6 HOH 14 2014 2014 HOH HOH B . J 6 HOH 15 2015 2015 HOH HOH B . J 6 HOH 16 2016 2016 HOH HOH B . J 6 HOH 17 2017 2017 HOH HOH B . J 6 HOH 18 2018 2018 HOH HOH B . J 6 HOH 19 2019 2019 HOH HOH B . J 6 HOH 20 2020 2020 HOH HOH B . J 6 HOH 21 2021 2021 HOH HOH B . J 6 HOH 22 2022 2022 HOH HOH B . J 6 HOH 23 2023 2023 HOH HOH B . J 6 HOH 24 2024 2024 HOH HOH B . J 6 HOH 25 2025 2025 HOH HOH B . J 6 HOH 26 2026 2026 HOH HOH B . J 6 HOH 27 2027 2027 HOH HOH B . J 6 HOH 28 2028 2028 HOH HOH B . J 6 HOH 29 2029 2029 HOH HOH B . J 6 HOH 30 2030 2030 HOH HOH B . J 6 HOH 31 2031 2031 HOH HOH B . J 6 HOH 32 2032 2032 HOH HOH B . J 6 HOH 33 2033 2033 HOH HOH B . J 6 HOH 34 2034 2034 HOH HOH B . J 6 HOH 35 2035 2035 HOH HOH B . J 6 HOH 36 2036 2036 HOH HOH B . J 6 HOH 37 2037 2037 HOH HOH B . J 6 HOH 38 2038 2038 HOH HOH B . J 6 HOH 39 2039 2039 HOH HOH B . J 6 HOH 40 2040 2040 HOH HOH B . J 6 HOH 41 2041 2041 HOH HOH B . J 6 HOH 42 2042 2042 HOH HOH B . J 6 HOH 43 2043 2043 HOH HOH B . J 6 HOH 44 2044 2044 HOH HOH B . J 6 HOH 45 2045 2045 HOH HOH B . J 6 HOH 46 2046 2046 HOH HOH B . J 6 HOH 47 2047 2047 HOH HOH B . J 6 HOH 48 2048 2048 HOH HOH B . J 6 HOH 49 2049 2049 HOH HOH B . J 6 HOH 50 2050 2050 HOH HOH B . J 6 HOH 51 2051 2051 HOH HOH B . J 6 HOH 52 2052 2052 HOH HOH B . J 6 HOH 53 2053 2053 HOH HOH B . J 6 HOH 54 2054 2054 HOH HOH B . J 6 HOH 55 2055 2055 HOH HOH B . J 6 HOH 56 2056 2056 HOH HOH B . J 6 HOH 57 2057 2057 HOH HOH B . J 6 HOH 58 2058 2058 HOH HOH B . J 6 HOH 59 2059 2059 HOH HOH B . J 6 HOH 60 2060 2060 HOH HOH B . J 6 HOH 61 2061 2061 HOH HOH B . J 6 HOH 62 2062 2062 HOH HOH B . J 6 HOH 63 2063 2063 HOH HOH B . J 6 HOH 64 2064 2064 HOH HOH B . J 6 HOH 65 2065 2065 HOH HOH B . J 6 HOH 66 2066 2066 HOH HOH B . J 6 HOH 67 2067 2067 HOH HOH B . J 6 HOH 68 2068 2068 HOH HOH B . J 6 HOH 69 2069 2069 HOH HOH B . J 6 HOH 70 2070 2070 HOH HOH B . J 6 HOH 71 2071 2071 HOH HOH B . J 6 HOH 72 2072 2072 HOH HOH B . J 6 HOH 73 2073 2073 HOH HOH B . J 6 HOH 74 2074 2074 HOH HOH B . J 6 HOH 75 2075 2075 HOH HOH B . J 6 HOH 76 2076 2076 HOH HOH B . J 6 HOH 77 2077 2077 HOH HOH B . J 6 HOH 78 2078 2078 HOH HOH B . J 6 HOH 79 2079 2079 HOH HOH B . J 6 HOH 80 2080 2080 HOH HOH B . J 6 HOH 81 2081 2081 HOH HOH B . J 6 HOH 82 2082 2082 HOH HOH B . J 6 HOH 83 2083 2083 HOH HOH B . J 6 HOH 84 2084 2084 HOH HOH B . J 6 HOH 85 2085 2085 HOH HOH B . J 6 HOH 86 2086 2086 HOH HOH B . J 6 HOH 87 2087 2087 HOH HOH B . J 6 HOH 88 2088 2088 HOH HOH B . J 6 HOH 89 2089 2089 HOH HOH B . J 6 HOH 90 2090 2090 HOH HOH B . J 6 HOH 91 2091 2091 HOH HOH B . J 6 HOH 92 2092 2092 HOH HOH B . J 6 HOH 93 2093 2093 HOH HOH B . # _pdbx_molecule_features.prd_id PRD_900013 _pdbx_molecule_features.name 'sucrose octasulfate' _pdbx_molecule_features.type Oligosaccharide _pdbx_molecule_features.class 'Substrate analog' _pdbx_molecule_features.details 'oligosaccharide with reducing-end-to-reducing-end glycosidic bond' # _pdbx_molecule.instance_id 1 _pdbx_molecule.prd_id PRD_900013 _pdbx_molecule.asym_id C # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 9120 ? 1 MORE -26.7 ? 1 'SSA (A^2)' 31120 ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 2_555 -x,y,-z -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2008-10-21 2 'Structure model' 1 1 2014-02-05 3 'Structure model' 2 0 2020-07-29 4 'Structure model' 2 1 2023-12-13 # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description _pdbx_audit_revision_details.details 1 1 'Structure model' repository 'Initial release' ? ? 2 3 'Structure model' repository Remediation 'Carbohydrate remediation' ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Derived calculations' 2 2 'Structure model' 'Non-polymer description' 3 2 'Structure model' Other 4 2 'Structure model' 'Refinement description' 5 2 'Structure model' 'Source and taxonomy' 6 2 'Structure model' 'Structure summary' 7 2 'Structure model' 'Version format compliance' 8 3 'Structure model' 'Atomic model' 9 3 'Structure model' 'Data collection' 10 3 'Structure model' 'Derived calculations' 11 3 'Structure model' 'Non-polymer description' 12 3 'Structure model' Other 13 3 'Structure model' 'Structure summary' 14 4 'Structure model' 'Data collection' 15 4 'Structure model' 'Database references' 16 4 'Structure model' 'Refinement description' 17 4 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' atom_site 2 3 'Structure model' chem_comp 3 3 'Structure model' entity 4 3 'Structure model' entity_name_com 5 3 'Structure model' pdbx_branch_scheme 6 3 'Structure model' pdbx_chem_comp_identifier 7 3 'Structure model' pdbx_database_status 8 3 'Structure model' pdbx_entity_branch 9 3 'Structure model' pdbx_entity_branch_descriptor 10 3 'Structure model' pdbx_entity_branch_link 11 3 'Structure model' pdbx_entity_branch_list 12 3 'Structure model' pdbx_entity_nonpoly 13 3 'Structure model' pdbx_molecule_features 14 3 'Structure model' pdbx_nonpoly_scheme 15 3 'Structure model' struct_conn 16 3 'Structure model' struct_conn_type 17 3 'Structure model' struct_site 18 3 'Structure model' struct_site_gen 19 4 'Structure model' chem_comp 20 4 'Structure model' chem_comp_atom 21 4 'Structure model' chem_comp_bond 22 4 'Structure model' database_2 23 4 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_atom_site.B_iso_or_equiv' 2 3 'Structure model' '_atom_site.Cartn_x' 3 3 'Structure model' '_atom_site.Cartn_y' 4 3 'Structure model' '_atom_site.Cartn_z' 5 3 'Structure model' '_atom_site.auth_asym_id' 6 3 'Structure model' '_atom_site.auth_atom_id' 7 3 'Structure model' '_atom_site.auth_comp_id' 8 3 'Structure model' '_atom_site.auth_seq_id' 9 3 'Structure model' '_atom_site.label_atom_id' 10 3 'Structure model' '_atom_site.label_comp_id' 11 3 'Structure model' '_atom_site.type_symbol' 12 3 'Structure model' '_chem_comp.formula' 13 3 'Structure model' '_chem_comp.formula_weight' 14 3 'Structure model' '_chem_comp.id' 15 3 'Structure model' '_chem_comp.mon_nstd_flag' 16 3 'Structure model' '_chem_comp.name' 17 3 'Structure model' '_chem_comp.type' 18 3 'Structure model' '_entity.formula_weight' 19 3 'Structure model' '_entity.pdbx_description' 20 3 'Structure model' '_entity.type' 21 3 'Structure model' '_pdbx_database_status.status_code_sf' 22 3 'Structure model' '_struct_conn.conn_type_id' 23 3 'Structure model' '_struct_conn.id' 24 3 'Structure model' '_struct_conn.pdbx_dist_value' 25 3 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 26 3 'Structure model' '_struct_conn.pdbx_value_order' 27 3 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 28 3 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 29 3 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 30 3 'Structure model' '_struct_conn.ptnr1_label_asym_id' 31 3 'Structure model' '_struct_conn.ptnr1_label_atom_id' 32 3 'Structure model' '_struct_conn.ptnr1_label_comp_id' 33 3 'Structure model' '_struct_conn.ptnr1_label_seq_id' 34 3 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 35 3 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 36 3 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 37 3 'Structure model' '_struct_conn.ptnr2_label_asym_id' 38 3 'Structure model' '_struct_conn.ptnr2_label_atom_id' 39 3 'Structure model' '_struct_conn.ptnr2_label_comp_id' 40 3 'Structure model' '_struct_conn.ptnr2_label_seq_id' 41 3 'Structure model' '_struct_conn.ptnr2_symmetry' 42 4 'Structure model' '_chem_comp.pdbx_synonyms' 43 4 'Structure model' '_database_2.pdbx_DOI' 44 4 'Structure model' '_database_2.pdbx_database_accession' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal REFMAC refinement 5.4.0066 ? 1 XSCALE 'data scaling' . ? 2 PHASER phasing . ? 3 # _pdbx_entry_details.entry_id 2V5E _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ;N-ACETYLGLUCOSAMINE (NAG): THE N-GLYCAN IS LINKED TO GDNF CHAIN B RESIDUE N 49. ; _pdbx_entry_details.sequence_details ;THE SEQUENCE NUMBERING OF THE MATURE GDNF EXCLUDES THE 77 RESIDUES OF THE PREPRO REGION FROM THE SEQUENCE. ; _pdbx_entry_details.has_ligand_of_interest ? # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 ND2 _pdbx_validate_close_contact.auth_asym_id_1 B _pdbx_validate_close_contact.auth_comp_id_1 ASN _pdbx_validate_close_contact.auth_seq_id_1 49 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 C1 _pdbx_validate_close_contact.auth_asym_id_2 B _pdbx_validate_close_contact.auth_comp_id_2 NAG _pdbx_validate_close_contact.auth_seq_id_2 1135 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 1.45 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 TYR A 235 ? ? -125.52 -60.09 2 1 ASN A 276 ? ? 80.59 11.47 3 1 THR A 298 ? ? -39.85 114.59 4 1 SER A 304 ? ? -49.52 -13.22 5 1 VAL B 93 ? ? -65.77 76.09 6 1 SER B 94 ? ? 165.15 165.09 # _pdbx_distant_solvent_atoms.id 1 _pdbx_distant_solvent_atoms.PDB_model_num 1 _pdbx_distant_solvent_atoms.auth_atom_id O _pdbx_distant_solvent_atoms.label_alt_id ? _pdbx_distant_solvent_atoms.auth_asym_id A _pdbx_distant_solvent_atoms.auth_comp_id HOH _pdbx_distant_solvent_atoms.auth_seq_id 2060 _pdbx_distant_solvent_atoms.PDB_ins_code ? _pdbx_distant_solvent_atoms.neighbor_macromolecule_distance 6.34 _pdbx_distant_solvent_atoms.neighbor_ligand_distance . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A ARG 238 ? CG ? A ARG 89 CG 2 1 Y 1 A ARG 238 ? CD ? A ARG 89 CD 3 1 Y 1 A ARG 238 ? NE ? A ARG 89 NE 4 1 Y 1 A ARG 238 ? CZ ? A ARG 89 CZ 5 1 Y 1 A ARG 238 ? NH1 ? A ARG 89 NH1 6 1 Y 1 A ARG 238 ? NH2 ? A ARG 89 NH2 7 1 Y 1 B LYS 96 ? CG ? B LYS 63 CG 8 1 Y 1 B LYS 96 ? CD ? B LYS 63 CD 9 1 Y 1 B LYS 96 ? CE ? B LYS 63 CE 10 1 Y 1 B LYS 96 ? NZ ? B LYS 63 NZ 11 1 N 1 B NAG 1135 ? O1 ? H NAG 1 O1 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 EDO C1 C N N 88 EDO O1 O N N 89 EDO C2 C N N 90 EDO O2 O N N 91 EDO H11 H N N 92 EDO H12 H N N 93 EDO HO1 H N N 94 EDO H21 H N N 95 EDO H22 H N N 96 EDO HO2 H N N 97 GLN N N N N 98 GLN CA C N S 99 GLN C C N N 100 GLN O O N N 101 GLN CB C N N 102 GLN CG C N N 103 GLN CD C N N 104 GLN OE1 O N N 105 GLN NE2 N N N 106 GLN OXT O N N 107 GLN H H N N 108 GLN H2 H N N 109 GLN HA H N N 110 GLN HB2 H N N 111 GLN HB3 H N N 112 GLN HG2 H N N 113 GLN HG3 H N N 114 GLN HE21 H N N 115 GLN HE22 H N N 116 GLN HXT H N N 117 GLU N N N N 118 GLU CA C N S 119 GLU C C N N 120 GLU O O N N 121 GLU CB C N N 122 GLU CG C N N 123 GLU CD C N N 124 GLU OE1 O N N 125 GLU OE2 O N N 126 GLU OXT O N N 127 GLU H H N N 128 GLU H2 H N N 129 GLU HA H N N 130 GLU HB2 H N N 131 GLU HB3 H N N 132 GLU HG2 H N N 133 GLU HG3 H N N 134 GLU HE2 H N N 135 GLU HXT H N N 136 GLY N N N N 137 GLY CA C N N 138 GLY C C N N 139 GLY O O N N 140 GLY OXT O N N 141 GLY H H N N 142 GLY H2 H N N 143 GLY HA2 H N N 144 GLY HA3 H N N 145 GLY HXT H N N 146 GU4 O1 O N N 147 GU4 C1 C N S 148 GU4 O5 O N N 149 GU4 C5 C N R 150 GU4 C6 C N N 151 GU4 O6 O N N 152 GU4 S6 S N N 153 GU4 O22 O N N 154 GU4 O23 O N N 155 GU4 O21 O N N 156 GU4 C4 C N R 157 GU4 O4 O N N 158 GU4 S4 S N N 159 GU4 O25 O N N 160 GU4 O26 O N N 161 GU4 O24 O N N 162 GU4 C3 C N S 163 GU4 O3 O N N 164 GU4 S3 S N N 165 GU4 O28 O N N 166 GU4 O29 O N N 167 GU4 O27 O N N 168 GU4 C2 C N R 169 GU4 O2 O N N 170 GU4 S2 S N N 171 GU4 O11 O N N 172 GU4 O12 O N N 173 GU4 O10 O N N 174 GU4 HO1 H N N 175 GU4 H1 H N N 176 GU4 H5 H N N 177 GU4 H61 H N N 178 GU4 H62 H N N 179 GU4 H4 H N N 180 GU4 H3 H N N 181 GU4 H2 H N N 182 GU4 HO21 H N N 183 GU4 HO24 H N N 184 GU4 HO29 H N N 185 GU4 HO10 H N N 186 HIS N N N N 187 HIS CA C N S 188 HIS C C N N 189 HIS O O N N 190 HIS CB C N N 191 HIS CG C Y N 192 HIS ND1 N Y N 193 HIS CD2 C Y N 194 HIS CE1 C Y N 195 HIS NE2 N Y N 196 HIS OXT O N N 197 HIS H H N N 198 HIS H2 H N N 199 HIS HA H N N 200 HIS HB2 H N N 201 HIS HB3 H N N 202 HIS HD1 H N N 203 HIS HD2 H N N 204 HIS HE1 H N N 205 HIS HE2 H N N 206 HIS HXT H N N 207 HOH O O N N 208 HOH H1 H N N 209 HOH H2 H N N 210 ILE N N N N 211 ILE CA C N S 212 ILE C C N N 213 ILE O O N N 214 ILE CB C N S 215 ILE CG1 C N N 216 ILE CG2 C N N 217 ILE CD1 C N N 218 ILE OXT O N N 219 ILE H H N N 220 ILE H2 H N N 221 ILE HA H N N 222 ILE HB H N N 223 ILE HG12 H N N 224 ILE HG13 H N N 225 ILE HG21 H N N 226 ILE HG22 H N N 227 ILE HG23 H N N 228 ILE HD11 H N N 229 ILE HD12 H N N 230 ILE HD13 H N N 231 ILE HXT H N N 232 LEU N N N N 233 LEU CA C N S 234 LEU C C N N 235 LEU O O N N 236 LEU CB C N N 237 LEU CG C N N 238 LEU CD1 C N N 239 LEU CD2 C N N 240 LEU OXT O N N 241 LEU H H N N 242 LEU H2 H N N 243 LEU HA H N N 244 LEU HB2 H N N 245 LEU HB3 H N N 246 LEU HG H N N 247 LEU HD11 H N N 248 LEU HD12 H N N 249 LEU HD13 H N N 250 LEU HD21 H N N 251 LEU HD22 H N N 252 LEU HD23 H N N 253 LEU HXT H N N 254 LYS N N N N 255 LYS CA C N S 256 LYS C C N N 257 LYS O O N N 258 LYS CB C N N 259 LYS CG C N N 260 LYS CD C N N 261 LYS CE C N N 262 LYS NZ N N N 263 LYS OXT O N N 264 LYS H H N N 265 LYS H2 H N N 266 LYS HA H N N 267 LYS HB2 H N N 268 LYS HB3 H N N 269 LYS HG2 H N N 270 LYS HG3 H N N 271 LYS HD2 H N N 272 LYS HD3 H N N 273 LYS HE2 H N N 274 LYS HE3 H N N 275 LYS HZ1 H N N 276 LYS HZ2 H N N 277 LYS HZ3 H N N 278 LYS HXT H N N 279 MET N N N N 280 MET CA C N S 281 MET C C N N 282 MET O O N N 283 MET CB C N N 284 MET CG C N N 285 MET SD S N N 286 MET CE C N N 287 MET OXT O N N 288 MET H H N N 289 MET H2 H N N 290 MET HA H N N 291 MET HB2 H N N 292 MET HB3 H N N 293 MET HG2 H N N 294 MET HG3 H N N 295 MET HE1 H N N 296 MET HE2 H N N 297 MET HE3 H N N 298 MET HXT H N N 299 NAG C1 C N R 300 NAG C2 C N R 301 NAG C3 C N R 302 NAG C4 C N S 303 NAG C5 C N R 304 NAG C6 C N N 305 NAG C7 C N N 306 NAG C8 C N N 307 NAG N2 N N N 308 NAG O1 O N N 309 NAG O3 O N N 310 NAG O4 O N N 311 NAG O5 O N N 312 NAG O6 O N N 313 NAG O7 O N N 314 NAG H1 H N N 315 NAG H2 H N N 316 NAG H3 H N N 317 NAG H4 H N N 318 NAG H5 H N N 319 NAG H61 H N N 320 NAG H62 H N N 321 NAG H81 H N N 322 NAG H82 H N N 323 NAG H83 H N N 324 NAG HN2 H N N 325 NAG HO1 H N N 326 NAG HO3 H N N 327 NAG HO4 H N N 328 NAG HO6 H N N 329 PHE N N N N 330 PHE CA C N S 331 PHE C C N N 332 PHE O O N N 333 PHE CB C N N 334 PHE CG C Y N 335 PHE CD1 C Y N 336 PHE CD2 C Y N 337 PHE CE1 C Y N 338 PHE CE2 C Y N 339 PHE CZ C Y N 340 PHE OXT O N N 341 PHE H H N N 342 PHE H2 H N N 343 PHE HA H N N 344 PHE HB2 H N N 345 PHE HB3 H N N 346 PHE HD1 H N N 347 PHE HD2 H N N 348 PHE HE1 H N N 349 PHE HE2 H N N 350 PHE HZ H N N 351 PHE HXT H N N 352 PRO N N N N 353 PRO CA C N S 354 PRO C C N N 355 PRO O O N N 356 PRO CB C N N 357 PRO CG C N N 358 PRO CD C N N 359 PRO OXT O N N 360 PRO H H N N 361 PRO HA H N N 362 PRO HB2 H N N 363 PRO HB3 H N N 364 PRO HG2 H N N 365 PRO HG3 H N N 366 PRO HD2 H N N 367 PRO HD3 H N N 368 PRO HXT H N N 369 SER N N N N 370 SER CA C N S 371 SER C C N N 372 SER O O N N 373 SER CB C N N 374 SER OG O N N 375 SER OXT O N N 376 SER H H N N 377 SER H2 H N N 378 SER HA H N N 379 SER HB2 H N N 380 SER HB3 H N N 381 SER HG H N N 382 SER HXT H N N 383 THR N N N N 384 THR CA C N S 385 THR C C N N 386 THR O O N N 387 THR CB C N R 388 THR OG1 O N N 389 THR CG2 C N N 390 THR OXT O N N 391 THR H H N N 392 THR H2 H N N 393 THR HA H N N 394 THR HB H N N 395 THR HG1 H N N 396 THR HG21 H N N 397 THR HG22 H N N 398 THR HG23 H N N 399 THR HXT H N N 400 TRP N N N N 401 TRP CA C N S 402 TRP C C N N 403 TRP O O N N 404 TRP CB C N N 405 TRP CG C Y N 406 TRP CD1 C Y N 407 TRP CD2 C Y N 408 TRP NE1 N Y N 409 TRP CE2 C Y N 410 TRP CE3 C Y N 411 TRP CZ2 C Y N 412 TRP CZ3 C Y N 413 TRP CH2 C Y N 414 TRP OXT O N N 415 TRP H H N N 416 TRP H2 H N N 417 TRP HA H N N 418 TRP HB2 H N N 419 TRP HB3 H N N 420 TRP HD1 H N N 421 TRP HE1 H N N 422 TRP HE3 H N N 423 TRP HZ2 H N N 424 TRP HZ3 H N N 425 TRP HH2 H N N 426 TRP HXT H N N 427 TYR N N N N 428 TYR CA C N S 429 TYR C C N N 430 TYR O O N N 431 TYR CB C N N 432 TYR CG C Y N 433 TYR CD1 C Y N 434 TYR CD2 C Y N 435 TYR CE1 C Y N 436 TYR CE2 C Y N 437 TYR CZ C Y N 438 TYR OH O N N 439 TYR OXT O N N 440 TYR H H N N 441 TYR H2 H N N 442 TYR HA H N N 443 TYR HB2 H N N 444 TYR HB3 H N N 445 TYR HD1 H N N 446 TYR HD2 H N N 447 TYR HE1 H N N 448 TYR HE2 H N N 449 TYR HH H N N 450 TYR HXT H N N 451 VAL N N N N 452 VAL CA C N S 453 VAL C C N N 454 VAL O O N N 455 VAL CB C N N 456 VAL CG1 C N N 457 VAL CG2 C N N 458 VAL OXT O N N 459 VAL H H N N 460 VAL H2 H N N 461 VAL HA H N N 462 VAL HB H N N 463 VAL HG11 H N N 464 VAL HG12 H N N 465 VAL HG13 H N N 466 VAL HG21 H N N 467 VAL HG22 H N N 468 VAL HG23 H N N 469 VAL HXT H N N 470 YYJ C1 C N N 471 YYJ C2 C N R 472 YYJ C3 C N S 473 YYJ C4 C N R 474 YYJ C5 C N R 475 YYJ C6 C N N 476 YYJ O1 O N N 477 YYJ O1S1 O N N 478 YYJ O1S3 O N N 479 YYJ O1S4 O N N 480 YYJ O1S6 O N N 481 YYJ O2 O N N 482 YYJ O2S1 O N N 483 YYJ O2S3 O N N 484 YYJ O2S4 O N N 485 YYJ O2S6 O N N 486 YYJ O3 O N N 487 YYJ O3S1 O N N 488 YYJ O3S3 O N N 489 YYJ O3S4 O N N 490 YYJ O3S6 O N N 491 YYJ O4 O N N 492 YYJ O5 O N N 493 YYJ O6 O N N 494 YYJ S1 S N N 495 YYJ S3 S N N 496 YYJ S4 S N N 497 YYJ S6 S N N 498 YYJ H11 H N N 499 YYJ H12 H N N 500 YYJ H1S1 H N N 501 YYJ H1S3 H N N 502 YYJ H1S4 H N N 503 YYJ H1S6 H N N 504 YYJ HO2 H N N 505 YYJ H3 H N N 506 YYJ H4 H N N 507 YYJ H5 H N N 508 YYJ H61 H N N 509 YYJ H62 H N N 510 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 EDO C1 O1 sing N N 83 EDO C1 C2 sing N N 84 EDO C1 H11 sing N N 85 EDO C1 H12 sing N N 86 EDO O1 HO1 sing N N 87 EDO C2 O2 sing N N 88 EDO C2 H21 sing N N 89 EDO C2 H22 sing N N 90 EDO O2 HO2 sing N N 91 GLN N CA sing N N 92 GLN N H sing N N 93 GLN N H2 sing N N 94 GLN CA C sing N N 95 GLN CA CB sing N N 96 GLN CA HA sing N N 97 GLN C O doub N N 98 GLN C OXT sing N N 99 GLN CB CG sing N N 100 GLN CB HB2 sing N N 101 GLN CB HB3 sing N N 102 GLN CG CD sing N N 103 GLN CG HG2 sing N N 104 GLN CG HG3 sing N N 105 GLN CD OE1 doub N N 106 GLN CD NE2 sing N N 107 GLN NE2 HE21 sing N N 108 GLN NE2 HE22 sing N N 109 GLN OXT HXT sing N N 110 GLU N CA sing N N 111 GLU N H sing N N 112 GLU N H2 sing N N 113 GLU CA C sing N N 114 GLU CA CB sing N N 115 GLU CA HA sing N N 116 GLU C O doub N N 117 GLU C OXT sing N N 118 GLU CB CG sing N N 119 GLU CB HB2 sing N N 120 GLU CB HB3 sing N N 121 GLU CG CD sing N N 122 GLU CG HG2 sing N N 123 GLU CG HG3 sing N N 124 GLU CD OE1 doub N N 125 GLU CD OE2 sing N N 126 GLU OE2 HE2 sing N N 127 GLU OXT HXT sing N N 128 GLY N CA sing N N 129 GLY N H sing N N 130 GLY N H2 sing N N 131 GLY CA C sing N N 132 GLY CA HA2 sing N N 133 GLY CA HA3 sing N N 134 GLY C O doub N N 135 GLY C OXT sing N N 136 GLY OXT HXT sing N N 137 GU4 O1 C1 sing N N 138 GU4 O1 HO1 sing N N 139 GU4 C1 O5 sing N N 140 GU4 C1 C2 sing N N 141 GU4 C1 H1 sing N N 142 GU4 O5 C5 sing N N 143 GU4 C5 C6 sing N N 144 GU4 C5 C4 sing N N 145 GU4 C5 H5 sing N N 146 GU4 C6 O6 sing N N 147 GU4 C6 H61 sing N N 148 GU4 C6 H62 sing N N 149 GU4 O6 S6 sing N N 150 GU4 S6 O22 doub N N 151 GU4 S6 O23 doub N N 152 GU4 S6 O21 sing N N 153 GU4 C4 O4 sing N N 154 GU4 C4 C3 sing N N 155 GU4 C4 H4 sing N N 156 GU4 O4 S4 sing N N 157 GU4 S4 O25 doub N N 158 GU4 S4 O26 doub N N 159 GU4 S4 O24 sing N N 160 GU4 C3 O3 sing N N 161 GU4 C3 C2 sing N N 162 GU4 C3 H3 sing N N 163 GU4 O3 S3 sing N N 164 GU4 S3 O28 doub N N 165 GU4 S3 O29 sing N N 166 GU4 S3 O27 doub N N 167 GU4 C2 O2 sing N N 168 GU4 C2 H2 sing N N 169 GU4 O2 S2 sing N N 170 GU4 S2 O11 doub N N 171 GU4 S2 O12 doub N N 172 GU4 S2 O10 sing N N 173 GU4 O21 HO21 sing N N 174 GU4 O24 HO24 sing N N 175 GU4 O29 HO29 sing N N 176 GU4 O10 HO10 sing N N 177 HIS N CA sing N N 178 HIS N H sing N N 179 HIS N H2 sing N N 180 HIS CA C sing N N 181 HIS CA CB sing N N 182 HIS CA HA sing N N 183 HIS C O doub N N 184 HIS C OXT sing N N 185 HIS CB CG sing N N 186 HIS CB HB2 sing N N 187 HIS CB HB3 sing N N 188 HIS CG ND1 sing Y N 189 HIS CG CD2 doub Y N 190 HIS ND1 CE1 doub Y N 191 HIS ND1 HD1 sing N N 192 HIS CD2 NE2 sing Y N 193 HIS CD2 HD2 sing N N 194 HIS CE1 NE2 sing Y N 195 HIS CE1 HE1 sing N N 196 HIS NE2 HE2 sing N N 197 HIS OXT HXT sing N N 198 HOH O H1 sing N N 199 HOH O H2 sing N N 200 ILE N CA sing N N 201 ILE N H sing N N 202 ILE N H2 sing N N 203 ILE CA C sing N N 204 ILE CA CB sing N N 205 ILE CA HA sing N N 206 ILE C O doub N N 207 ILE C OXT sing N N 208 ILE CB CG1 sing N N 209 ILE CB CG2 sing N N 210 ILE CB HB sing N N 211 ILE CG1 CD1 sing N N 212 ILE CG1 HG12 sing N N 213 ILE CG1 HG13 sing N N 214 ILE CG2 HG21 sing N N 215 ILE CG2 HG22 sing N N 216 ILE CG2 HG23 sing N N 217 ILE CD1 HD11 sing N N 218 ILE CD1 HD12 sing N N 219 ILE CD1 HD13 sing N N 220 ILE OXT HXT sing N N 221 LEU N CA sing N N 222 LEU N H sing N N 223 LEU N H2 sing N N 224 LEU CA C sing N N 225 LEU CA CB sing N N 226 LEU CA HA sing N N 227 LEU C O doub N N 228 LEU C OXT sing N N 229 LEU CB CG sing N N 230 LEU CB HB2 sing N N 231 LEU CB HB3 sing N N 232 LEU CG CD1 sing N N 233 LEU CG CD2 sing N N 234 LEU CG HG sing N N 235 LEU CD1 HD11 sing N N 236 LEU CD1 HD12 sing N N 237 LEU CD1 HD13 sing N N 238 LEU CD2 HD21 sing N N 239 LEU CD2 HD22 sing N N 240 LEU CD2 HD23 sing N N 241 LEU OXT HXT sing N N 242 LYS N CA sing N N 243 LYS N H sing N N 244 LYS N H2 sing N N 245 LYS CA C sing N N 246 LYS CA CB sing N N 247 LYS CA HA sing N N 248 LYS C O doub N N 249 LYS C OXT sing N N 250 LYS CB CG sing N N 251 LYS CB HB2 sing N N 252 LYS CB HB3 sing N N 253 LYS CG CD sing N N 254 LYS CG HG2 sing N N 255 LYS CG HG3 sing N N 256 LYS CD CE sing N N 257 LYS CD HD2 sing N N 258 LYS CD HD3 sing N N 259 LYS CE NZ sing N N 260 LYS CE HE2 sing N N 261 LYS CE HE3 sing N N 262 LYS NZ HZ1 sing N N 263 LYS NZ HZ2 sing N N 264 LYS NZ HZ3 sing N N 265 LYS OXT HXT sing N N 266 MET N CA sing N N 267 MET N H sing N N 268 MET N H2 sing N N 269 MET CA C sing N N 270 MET CA CB sing N N 271 MET CA HA sing N N 272 MET C O doub N N 273 MET C OXT sing N N 274 MET CB CG sing N N 275 MET CB HB2 sing N N 276 MET CB HB3 sing N N 277 MET CG SD sing N N 278 MET CG HG2 sing N N 279 MET CG HG3 sing N N 280 MET SD CE sing N N 281 MET CE HE1 sing N N 282 MET CE HE2 sing N N 283 MET CE HE3 sing N N 284 MET OXT HXT sing N N 285 NAG C1 C2 sing N N 286 NAG C1 O1 sing N N 287 NAG C1 O5 sing N N 288 NAG C1 H1 sing N N 289 NAG C2 C3 sing N N 290 NAG C2 N2 sing N N 291 NAG C2 H2 sing N N 292 NAG C3 C4 sing N N 293 NAG C3 O3 sing N N 294 NAG C3 H3 sing N N 295 NAG C4 C5 sing N N 296 NAG C4 O4 sing N N 297 NAG C4 H4 sing N N 298 NAG C5 C6 sing N N 299 NAG C5 O5 sing N N 300 NAG C5 H5 sing N N 301 NAG C6 O6 sing N N 302 NAG C6 H61 sing N N 303 NAG C6 H62 sing N N 304 NAG C7 C8 sing N N 305 NAG C7 N2 sing N N 306 NAG C7 O7 doub N N 307 NAG C8 H81 sing N N 308 NAG C8 H82 sing N N 309 NAG C8 H83 sing N N 310 NAG N2 HN2 sing N N 311 NAG O1 HO1 sing N N 312 NAG O3 HO3 sing N N 313 NAG O4 HO4 sing N N 314 NAG O6 HO6 sing N N 315 PHE N CA sing N N 316 PHE N H sing N N 317 PHE N H2 sing N N 318 PHE CA C sing N N 319 PHE CA CB sing N N 320 PHE CA HA sing N N 321 PHE C O doub N N 322 PHE C OXT sing N N 323 PHE CB CG sing N N 324 PHE CB HB2 sing N N 325 PHE CB HB3 sing N N 326 PHE CG CD1 doub Y N 327 PHE CG CD2 sing Y N 328 PHE CD1 CE1 sing Y N 329 PHE CD1 HD1 sing N N 330 PHE CD2 CE2 doub Y N 331 PHE CD2 HD2 sing N N 332 PHE CE1 CZ doub Y N 333 PHE CE1 HE1 sing N N 334 PHE CE2 CZ sing Y N 335 PHE CE2 HE2 sing N N 336 PHE CZ HZ sing N N 337 PHE OXT HXT sing N N 338 PRO N CA sing N N 339 PRO N CD sing N N 340 PRO N H sing N N 341 PRO CA C sing N N 342 PRO CA CB sing N N 343 PRO CA HA sing N N 344 PRO C O doub N N 345 PRO C OXT sing N N 346 PRO CB CG sing N N 347 PRO CB HB2 sing N N 348 PRO CB HB3 sing N N 349 PRO CG CD sing N N 350 PRO CG HG2 sing N N 351 PRO CG HG3 sing N N 352 PRO CD HD2 sing N N 353 PRO CD HD3 sing N N 354 PRO OXT HXT sing N N 355 SER N CA sing N N 356 SER N H sing N N 357 SER N H2 sing N N 358 SER CA C sing N N 359 SER CA CB sing N N 360 SER CA HA sing N N 361 SER C O doub N N 362 SER C OXT sing N N 363 SER CB OG sing N N 364 SER CB HB2 sing N N 365 SER CB HB3 sing N N 366 SER OG HG sing N N 367 SER OXT HXT sing N N 368 THR N CA sing N N 369 THR N H sing N N 370 THR N H2 sing N N 371 THR CA C sing N N 372 THR CA CB sing N N 373 THR CA HA sing N N 374 THR C O doub N N 375 THR C OXT sing N N 376 THR CB OG1 sing N N 377 THR CB CG2 sing N N 378 THR CB HB sing N N 379 THR OG1 HG1 sing N N 380 THR CG2 HG21 sing N N 381 THR CG2 HG22 sing N N 382 THR CG2 HG23 sing N N 383 THR OXT HXT sing N N 384 TRP N CA sing N N 385 TRP N H sing N N 386 TRP N H2 sing N N 387 TRP CA C sing N N 388 TRP CA CB sing N N 389 TRP CA HA sing N N 390 TRP C O doub N N 391 TRP C OXT sing N N 392 TRP CB CG sing N N 393 TRP CB HB2 sing N N 394 TRP CB HB3 sing N N 395 TRP CG CD1 doub Y N 396 TRP CG CD2 sing Y N 397 TRP CD1 NE1 sing Y N 398 TRP CD1 HD1 sing N N 399 TRP CD2 CE2 doub Y N 400 TRP CD2 CE3 sing Y N 401 TRP NE1 CE2 sing Y N 402 TRP NE1 HE1 sing N N 403 TRP CE2 CZ2 sing Y N 404 TRP CE3 CZ3 doub Y N 405 TRP CE3 HE3 sing N N 406 TRP CZ2 CH2 doub Y N 407 TRP CZ2 HZ2 sing N N 408 TRP CZ3 CH2 sing Y N 409 TRP CZ3 HZ3 sing N N 410 TRP CH2 HH2 sing N N 411 TRP OXT HXT sing N N 412 TYR N CA sing N N 413 TYR N H sing N N 414 TYR N H2 sing N N 415 TYR CA C sing N N 416 TYR CA CB sing N N 417 TYR CA HA sing N N 418 TYR C O doub N N 419 TYR C OXT sing N N 420 TYR CB CG sing N N 421 TYR CB HB2 sing N N 422 TYR CB HB3 sing N N 423 TYR CG CD1 doub Y N 424 TYR CG CD2 sing Y N 425 TYR CD1 CE1 sing Y N 426 TYR CD1 HD1 sing N N 427 TYR CD2 CE2 doub Y N 428 TYR CD2 HD2 sing N N 429 TYR CE1 CZ doub Y N 430 TYR CE1 HE1 sing N N 431 TYR CE2 CZ sing Y N 432 TYR CE2 HE2 sing N N 433 TYR CZ OH sing N N 434 TYR OH HH sing N N 435 TYR OXT HXT sing N N 436 VAL N CA sing N N 437 VAL N H sing N N 438 VAL N H2 sing N N 439 VAL CA C sing N N 440 VAL CA CB sing N N 441 VAL CA HA sing N N 442 VAL C O doub N N 443 VAL C OXT sing N N 444 VAL CB CG1 sing N N 445 VAL CB CG2 sing N N 446 VAL CB HB sing N N 447 VAL CG1 HG11 sing N N 448 VAL CG1 HG12 sing N N 449 VAL CG1 HG13 sing N N 450 VAL CG2 HG21 sing N N 451 VAL CG2 HG22 sing N N 452 VAL CG2 HG23 sing N N 453 VAL OXT HXT sing N N 454 YYJ C1 C2 sing N N 455 YYJ C1 O1 sing N N 456 YYJ C1 H11 sing N N 457 YYJ C1 H12 sing N N 458 YYJ C2 C3 sing N N 459 YYJ C2 O2 sing N N 460 YYJ C2 O5 sing N N 461 YYJ C3 C4 sing N N 462 YYJ C3 O3 sing N N 463 YYJ C3 H3 sing N N 464 YYJ C4 C5 sing N N 465 YYJ C4 O4 sing N N 466 YYJ C4 H4 sing N N 467 YYJ C5 C6 sing N N 468 YYJ C5 O5 sing N N 469 YYJ C5 H5 sing N N 470 YYJ C6 O6 sing N N 471 YYJ C6 H61 sing N N 472 YYJ C6 H62 sing N N 473 YYJ O1 S1 sing N N 474 YYJ O1S1 S1 sing N N 475 YYJ O1S1 H1S1 sing N N 476 YYJ O1S3 H1S3 sing N N 477 YYJ O1S3 S3 sing N N 478 YYJ O1S4 S4 sing N N 479 YYJ O1S4 H1S4 sing N N 480 YYJ O1S6 H1S6 sing N N 481 YYJ O1S6 S6 sing N N 482 YYJ O2 HO2 sing N N 483 YYJ O2S1 S1 doub N N 484 YYJ O2S3 S3 doub N N 485 YYJ O2S4 S4 doub N N 486 YYJ O2S6 S6 doub N N 487 YYJ O3 S3 sing N N 488 YYJ O3S1 S1 doub N N 489 YYJ O3S3 S3 doub N N 490 YYJ O3S4 S4 doub N N 491 YYJ O3S6 S6 doub N N 492 YYJ O4 S4 sing N N 493 YYJ O6 S6 sing N N 494 # loop_ _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_mon_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.hetero C 3 GU4 1 C GU4 1 A SCR 1350 n C 3 YYJ 2 C YYJ 2 A SCR 1350 n # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier GU4 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 'DGlcp[2S,3S,4S,6S]a' GU4 'COMMON NAME' GMML 1.0 2-sulfo-3-sulfo-4-sulfo-6-sulfo-a-D-glucopyranose GU4 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 a-D-Glcp2SO33SO34SO36SO3 NAG 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGlcpNAcb NAG 'COMMON NAME' GMML 1.0 N-acetyl-b-D-glucopyranosamine NAG 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-GlcpNAc NAG 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 GlcNAc # _pdbx_entity_branch.entity_id 3 _pdbx_entity_branch.type oligosaccharide # loop_ _pdbx_entity_branch_descriptor.ordinal _pdbx_entity_branch_descriptor.entity_id _pdbx_entity_branch_descriptor.descriptor _pdbx_entity_branch_descriptor.type _pdbx_entity_branch_descriptor.program _pdbx_entity_branch_descriptor.program_version 1 3 ;WURCS=2.0/2,2,1/[ha122h-2b_2-5_1*OSO/3=O/3=O_3*OSO/3=O/3=O_4*OSO/3=O/3=O_6*OSO/3=O/3=O][a2122h-1a_1-5_2*OSO/3=O/3=O_3*OSO/3=O/3=O_4*OSO/3=O/3=O_6*OSO/3=O/3=O]/1-2/a2-b1 ; WURCS PDB2Glycan 1.1.0 2 3 '[][b-D-Fruf1SO33SO34SO36SO3]{[(2+1)][a-D-Glcp2SO33SO34SO36SO3]{}}' LINUCS PDB-CARE ? # _pdbx_entity_branch_link.link_id 1 _pdbx_entity_branch_link.entity_id 3 _pdbx_entity_branch_link.entity_branch_list_num_1 1 _pdbx_entity_branch_link.comp_id_1 GU4 _pdbx_entity_branch_link.atom_id_1 C1 _pdbx_entity_branch_link.leaving_atom_id_1 O1 _pdbx_entity_branch_link.entity_branch_list_num_2 2 _pdbx_entity_branch_link.comp_id_2 YYJ _pdbx_entity_branch_link.atom_id_2 O2 _pdbx_entity_branch_link.leaving_atom_id_2 HO2 _pdbx_entity_branch_link.value_order sing _pdbx_entity_branch_link.details ? # loop_ _pdbx_entity_branch_list.entity_id _pdbx_entity_branch_list.comp_id _pdbx_entity_branch_list.num _pdbx_entity_branch_list.hetero 3 GU4 1 n 3 YYJ 2 n # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 4 1,2-ETHANEDIOL EDO 5 2-acetamido-2-deoxy-beta-D-glucopyranose NAG 6 water HOH # loop_ _pdbx_initial_refinement_model.id _pdbx_initial_refinement_model.entity_id_list _pdbx_initial_refinement_model.type _pdbx_initial_refinement_model.source_name _pdbx_initial_refinement_model.accession_code _pdbx_initial_refinement_model.details 1 ? 'experimental model' PDB 1AGQ 'PDB ENTRIES 1AGQ CHAIN A, 2GH0 CHAIN A' 2 ? 'experimental model' PDB 2GH0 'PDB ENTRIES 1AGQ CHAIN A, 2GH0 CHAIN A' #