data_2V9B # _entry.id 2V9B # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.312 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 2V9B PDBE EBI-33568 WWPDB D_1290033568 # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.content_type _pdbx_database_related.details PDB 1JMP unspecified 'SOLUTION STRUCTURE OF THE VISCOTOXIN B' PDB 1ORL unspecified '1H NMR STRUCTURE DETERMINATION OF VISCOTOXIN C1' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 2V9B _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.SG_entry . _pdbx_database_status.recvd_initial_deposition_date 2007-08-23 _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Debreczeni, J.E.' 1 ? 'Pal, A.' 2 ? 'Kahle, B.' 3 ? 'Zeeck, A.' 4 ? 'Sheldrick, G.M.' 5 ? # _citation.id primary _citation.title 'Structures of viscotoxins A1 and B2 from European mistletoe solved using native data alone.' _citation.journal_abbrev 'Acta Crystallogr. D Biol. Crystallogr.' _citation.journal_volume 64 _citation.page_first 985 _citation.page_last 992 _citation.year 2008 _citation.journal_id_ASTM ABCRE6 _citation.country DK _citation.journal_id_ISSN 0907-4449 _citation.journal_id_CSD 0766 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 18703848 _citation.pdbx_database_id_DOI 10.1107/S0907444908022646 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Pal, A.' 1 ? primary 'Debreczeni, J.E.' 2 ? primary 'Sevvana, M.' 3 ? primary 'Gruene, T.' 4 ? primary 'Kahle, B.' 5 ? primary 'Zeeck, A.' 6 ? primary 'Sheldrick, G.M.' 7 ? # _cell.entry_id 2V9B _cell.length_a 39.819 _cell.length_b 40.392 _cell.length_c 44.694 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2V9B _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer nat VISCOTOXIN-B 4865.536 2 ? YES ? ? 2 non-polymer syn 'SULFATE ION' 96.063 6 ? ? ? ? 3 water nat water 18.015 106 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'VISCOTOXIN B2' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code KSCCPNTTGRDIYNTCRLGGGSRERCASLSGCKIISASTCPSDYPK _entity_poly.pdbx_seq_one_letter_code_can KSCCPNTTGRDIYNTCRLGGGSRERCASLSGCKIISASTCPSDYPK _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 LYS n 1 2 SER n 1 3 CYS n 1 4 CYS n 1 5 PRO n 1 6 ASN n 1 7 THR n 1 8 THR n 1 9 GLY n 1 10 ARG n 1 11 ASP n 1 12 ILE n 1 13 TYR n 1 14 ASN n 1 15 THR n 1 16 CYS n 1 17 ARG n 1 18 LEU n 1 19 GLY n 1 20 GLY n 1 21 GLY n 1 22 SER n 1 23 ARG n 1 24 GLU n 1 25 ARG n 1 26 CYS n 1 27 ALA n 1 28 SER n 1 29 LEU n 1 30 SER n 1 31 GLY n 1 32 CYS n 1 33 LYS n 1 34 ILE n 1 35 ILE n 1 36 SER n 1 37 ALA n 1 38 SER n 1 39 THR n 1 40 CYS n 1 41 PRO n 1 42 SER n 1 43 ASP n 1 44 TYR n 1 45 PRO n 1 46 LYS n # _entity_src_nat.entity_id 1 _entity_src_nat.pdbx_src_id 1 _entity_src_nat.pdbx_alt_source_flag sample _entity_src_nat.pdbx_beg_seq_num ? _entity_src_nat.pdbx_end_seq_num ? _entity_src_nat.common_name 'EUROPEAN MISTLETOE' _entity_src_nat.pdbx_organism_scientific 'VISCUM ALBUM' _entity_src_nat.pdbx_ncbi_taxonomy_id 3972 _entity_src_nat.genus ? _entity_src_nat.species ? _entity_src_nat.strain ? _entity_src_nat.tissue ? _entity_src_nat.tissue_fraction ? _entity_src_nat.pdbx_secretion ? _entity_src_nat.pdbx_fragment ? _entity_src_nat.pdbx_variant ? _entity_src_nat.pdbx_cell_line ? _entity_src_nat.pdbx_atcc ? _entity_src_nat.pdbx_cellular_location ? _entity_src_nat.pdbx_organ ? _entity_src_nat.pdbx_organelle ? _entity_src_nat.pdbx_cell ? _entity_src_nat.pdbx_plasmid_name ? _entity_src_nat.pdbx_plasmid_details ? _entity_src_nat.details ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code THNB_VISAL _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin ? _struct_ref.pdbx_db_accession P08943 _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 2V9B A 1 ? 46 ? P08943 7 ? 52 ? 1 46 2 1 2V9B B 1 ? 46 ? P08943 7 ? 52 ? 1 46 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 2V9B ASP A 11 ? UNP P08943 ASN 17 variant 11 1 2 2V9B ASP B 11 ? UNP P08943 ASN 17 variant 11 2 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 SO4 non-polymer . 'SULFATE ION' ? 'O4 S -2' 96.063 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 # _exptl.entry_id 2V9B _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 1.7 _exptl_crystal.density_percent_sol 30 _exptl_crystal.description NONE _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 6.5 _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details '1UL HANGING DROP, 30 MG/ML PROTEIN, 0.2M AMSO4, 0.08M CACODYLATE PH 6.5, 25% PEG20000' # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 _diffrn.pdbx_serial_crystal_experiment ? # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type MARRESEARCH _diffrn_detector.pdbx_collection_date 2003-05-15 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.98 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'EMBL/DESY, HAMBURG BEAMLINE X13' _diffrn_source.pdbx_synchrotron_site 'EMBL/DESY, HAMBURG' _diffrn_source.pdbx_synchrotron_beamline X13 _diffrn_source.pdbx_wavelength 0.98 _diffrn_source.pdbx_wavelength_list ? # _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.entry_id 2V9B _reflns.observed_criterion_sigma_I 3.0 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 20.00 _reflns.d_resolution_high 1.15 _reflns.number_obs 34317 _reflns.number_all ? _reflns.percent_possible_obs 99.8 _reflns.pdbx_Rmerge_I_obs 0.06 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 25.80 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 21.34 # _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_ordinal 1 _reflns_shell.d_res_high 1.05 _reflns_shell.d_res_low 1.15 _reflns_shell.percent_possible_all 99.6 _reflns_shell.Rmerge_I_obs 0.22 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 12.60 _reflns_shell.pdbx_redundancy 21 # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 2V9B _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs ? _refine.ls_number_reflns_all 35151 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 12 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 40 _refine.ls_d_res_high 1.05 _refine.ls_percent_reflns_obs 99.8 _refine.ls_R_factor_obs ? _refine.ls_R_factor_all 0.1277 _refine.ls_R_factor_R_work ? _refine.ls_R_factor_R_free 0.1703 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5 _refine.ls_number_reflns_R_free 1833 _refine.ls_number_parameters 7604 _refine.ls_number_restraints 10158 _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGEN ATOMS WERE ADDED IN RIDING POSITIONS' _refine.pdbx_starting_model NONE _refine.pdbx_method_to_determine_struct 'DIRECT METHODS' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'ENGH AND HUBER' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.pdbx_overall_phase_error ? _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_analyze.entry_id 2V9B _refine_analyze.Luzzati_coordinate_error_obs ? _refine_analyze.Luzzati_sigma_a_obs ? _refine_analyze.Luzzati_d_res_low_obs ? _refine_analyze.Luzzati_coordinate_error_free ? _refine_analyze.Luzzati_sigma_a_free ? _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues 14 _refine_analyze.occupancy_sum_hydrogen 646 _refine_analyze.occupancy_sum_non_hydrogen 795 # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 664 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 30 _refine_hist.number_atoms_solvent 106 _refine_hist.number_atoms_total 800 _refine_hist.d_res_high 1.05 _refine_hist.d_res_low 40 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function s_bond_d 0.019 ? ? ? 'X-RAY DIFFRACTION' ? s_angle_d 0.034 ? ? ? 'X-RAY DIFFRACTION' ? s_similar_dist 0.016 ? ? ? 'X-RAY DIFFRACTION' ? s_from_restr_planes 0.0285 ? ? ? 'X-RAY DIFFRACTION' ? s_zero_chiral_vol 0.080 ? ? ? 'X-RAY DIFFRACTION' ? s_non_zero_chiral_vol 0.106 ? ? ? 'X-RAY DIFFRACTION' ? s_anti_bump_dis_restr 0.114 ? ? ? 'X-RAY DIFFRACTION' ? s_rigid_bond_adp_cmpnt 0.006 ? ? ? 'X-RAY DIFFRACTION' ? s_similar_adp_cmpnt 0.044 ? ? ? 'X-RAY DIFFRACTION' ? s_approx_iso_adps 0.092 ? ? ? 'X-RAY DIFFRACTION' ? # _pdbx_refine.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine.entry_id 2V9B _pdbx_refine.R_factor_all_no_cutoff 0.1277 _pdbx_refine.R_factor_obs_no_cutoff ? _pdbx_refine.free_R_factor_no_cutoff 0.1703 _pdbx_refine.free_R_error_no_cutoff ? _pdbx_refine.free_R_val_test_set_size_perc_no_cutoff 5 _pdbx_refine.free_R_val_test_set_ct_no_cutoff 1833 _pdbx_refine.R_factor_all_4sig_cutoff 0.1223 _pdbx_refine.R_factor_obs_4sig_cutoff ? _pdbx_refine.free_R_factor_4sig_cutoff 0.1649 _pdbx_refine.free_R_val_test_set_size_perc_4sig_cutoff 5 _pdbx_refine.free_R_val_test_set_ct_4sig_cutoff 1619 _pdbx_refine.number_reflns_obs_4sig_cutoff 31043 # _struct_ncs_oper.id 1 _struct_ncs_oper.code given _struct_ncs_oper.details ? _struct_ncs_oper.matrix[1][1] 0.000009 _struct_ncs_oper.matrix[1][2] 0.991300 _struct_ncs_oper.matrix[1][3] -0.131500 _struct_ncs_oper.matrix[2][1] 0.982700 _struct_ncs_oper.matrix[2][2] 0.024270 _struct_ncs_oper.matrix[2][3] 0.183700 _struct_ncs_oper.matrix[3][1] 0.185300 _struct_ncs_oper.matrix[3][2] -0.129200 _struct_ncs_oper.matrix[3][3] -0.974200 _struct_ncs_oper.vector[1] 7.41900 _struct_ncs_oper.vector[2] -11.22000 _struct_ncs_oper.vector[3] 5.43300 # _struct.entry_id 2V9B _struct.title 'X-ray structure of viscotoxin B2 from Viscum album' _struct.pdbx_descriptor VISCOTOXIN-B _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2V9B _struct_keywords.pdbx_keywords TOXIN _struct_keywords.text 'TOXIN, THIONIN, SECRETED, PLANT TOXIN, PLANT DEFENSE' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 2 ? E N N 2 ? F N N 2 ? G N N 2 ? H N N 2 ? I N N 3 ? J N N 3 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ASN A 6 ? GLY A 19 ? ASN A 6 GLY A 19 1 ? 14 HELX_P HELX_P2 2 SER A 22 ? GLY A 31 ? SER A 22 GLY A 31 1 ? 10 HELX_P HELX_P3 3 ASN B 6 ? GLY B 19 ? ASN B 6 GLY B 19 1 ? 14 HELX_P HELX_P4 4 SER B 22 ? GLY B 31 ? SER B 22 GLY B 31 1 ? 10 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf1 disulf ? ? A CYS 3 SG ? ? ? 1_555 A CYS 40 SG ? ? A CYS 3 A CYS 40 1_555 ? ? ? ? ? ? ? 2.025 ? disulf2 disulf ? ? A CYS 4 SG ? ? ? 1_555 A CYS 32 SG ? ? A CYS 4 A CYS 32 1_555 ? ? ? ? ? ? ? 2.039 ? disulf3 disulf ? ? A CYS 16 SG ? ? ? 1_555 A CYS 26 SG ? ? A CYS 16 A CYS 26 1_555 ? ? ? ? ? ? ? 2.085 ? disulf4 disulf ? ? B CYS 3 SG ? ? ? 1_555 B CYS 40 SG ? ? B CYS 3 B CYS 40 1_555 ? ? ? ? ? ? ? 1.984 ? disulf5 disulf ? ? B CYS 4 SG ? ? ? 1_555 B CYS 32 SG ? ? B CYS 4 B CYS 32 1_555 ? ? ? ? ? ? ? 2.039 ? disulf6 disulf ? ? B CYS 16 SG ? ? ? 1_555 B CYS 26 SG ? ? B CYS 16 B CYS 26 1_555 ? ? ? ? ? ? ? 2.006 ? # _struct_conn_type.id disulf _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA ? 2 ? BA ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA 1 2 ? anti-parallel BA 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA 1 SER A 2 ? CYS A 3 ? SER A 2 CYS A 3 AA 2 LYS A 33 ? ILE A 34 ? LYS A 33 ILE A 34 BA 1 SER B 2 ? CYS B 3 ? SER B 2 CYS B 3 BA 2 LYS B 33 ? ILE B 34 ? LYS B 33 ILE B 34 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA 1 2 N CYS A 3 ? N CYS A 3 O LYS A 33 ? O LYS A 33 BA 1 2 N CYS B 3 ? N CYS B 3 O LYS B 33 ? O LYS B 33 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software ? ? ? ? 6 'BINDING SITE FOR RESIDUE SO4 A1047' AC2 Software ? ? ? ? 4 'BINDING SITE FOR RESIDUE SO4 B1047' AC3 Software ? ? ? ? 10 'BINDING SITE FOR RESIDUE SO4 A1048' AC4 Software ? ? ? ? 11 'BINDING SITE FOR RESIDUE SO4 A1049' AC5 Software ? ? ? ? 10 'BINDING SITE FOR RESIDUE SO4 B1048' AC6 Software ? ? ? ? 7 'BINDING SITE FOR RESIDUE SO4 A1050' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 6 GLY A 21 ? GLY A 21 . ? 1_555 ? 2 AC1 6 SER A 22 ? SER A 22 . ? 1_555 ? 3 AC1 6 ARG A 25 ? ARG A 25 . ? 1_555 ? 4 AC1 6 HOH I . ? HOH A 2045 . ? 1_555 ? 5 AC1 6 ARG B 25 ? ARG B 25 . ? 1_555 ? 6 AC1 6 HOH J . ? HOH B 2040 . ? 1_555 ? 7 AC2 4 GLY B 21 ? GLY B 21 . ? 1_555 ? 8 AC2 4 SER B 22 ? SER B 22 . ? 1_555 ? 9 AC2 4 ARG B 25 ? ARG B 25 . ? 1_555 ? 10 AC2 4 HOH J . ? HOH B 2046 . ? 1_555 ? 11 AC3 10 LYS A 1 ? LYS A 1 . ? 1_555 ? 12 AC3 10 SER A 2 ? SER A 2 . ? 1_555 ? 13 AC3 10 THR A 7 ? THR A 7 . ? 1_555 ? 14 AC3 10 TYR A 13 ? TYR A 13 . ? 1_555 ? 15 AC3 10 ARG A 23 ? ARG A 23 . ? 1_555 ? 16 AC3 10 HOH I . ? HOH A 2011 . ? 1_555 ? 17 AC3 10 HOH I . ? HOH A 2021 . ? 1_555 ? 18 AC3 10 HOH I . ? HOH A 2046 . ? 1_555 ? 19 AC3 10 HOH I . ? HOH A 2047 . ? 1_555 ? 20 AC3 10 HOH I . ? HOH A 2048 . ? 1_555 ? 21 AC4 11 ASN A 6 ? ASN A 6 . ? 1_555 ? 22 AC4 11 THR A 7 ? THR A 7 . ? 1_555 ? 23 AC4 11 ARG A 23 ? ARG A 23 . ? 1_555 ? 24 AC4 11 LYS A 46 ? LYS A 46 . ? 1_555 ? 25 AC4 11 HOH I . ? HOH A 2004 . ? 1_555 ? 26 AC4 11 HOH I . ? HOH A 2009 . ? 1_555 ? 27 AC4 11 HOH I . ? HOH A 2049 . ? 1_555 ? 28 AC4 11 HOH I . ? HOH A 2050 . ? 1_555 ? 29 AC4 11 HOH I . ? HOH A 2051 . ? 1_555 ? 30 AC4 11 HOH I . ? HOH A 2052 . ? 1_555 ? 31 AC4 11 HOH J . ? HOH B 2001 . ? 1_555 ? 32 AC5 10 SER B 2 ? SER B 2 . ? 1_555 ? 33 AC5 10 TYR B 13 ? TYR B 13 . ? 1_555 ? 34 AC5 10 ARG B 17 ? ARG B 17 . ? 1_555 ? 35 AC5 10 ARG B 23 ? ARG B 23 . ? 1_555 ? 36 AC5 10 HOH J . ? HOH B 2023 . ? 1_555 ? 37 AC5 10 HOH J . ? HOH B 2048 . ? 1_555 ? 38 AC5 10 HOH J . ? HOH B 2049 . ? 1_555 ? 39 AC5 10 HOH J . ? HOH B 2050 . ? 1_555 ? 40 AC5 10 HOH J . ? HOH B 2051 . ? 1_555 ? 41 AC5 10 HOH J . ? HOH B 2052 . ? 1_555 ? 42 AC6 7 ARG A 17 ? ARG A 17 . ? 1_555 ? 43 AC6 7 SER A 22 ? SER A 22 . ? 1_555 ? 44 AC6 7 ARG A 23 ? ARG A 23 . ? 1_555 ? 45 AC6 7 HOH I . ? HOH A 2023 . ? 1_555 ? 46 AC6 7 HOH I . ? HOH A 2044 . ? 1_555 ? 47 AC6 7 HOH I . ? HOH A 2053 . ? 1_555 ? 48 AC6 7 HOH I . ? HOH A 2054 . ? 1_555 ? # _database_PDB_matrix.entry_id 2V9B _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 2V9B _atom_sites.fract_transf_matrix[1][1] 0.025114 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.024757 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.022374 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 LYS 1 1 1 LYS LYS A . n A 1 2 SER 2 2 2 SER SER A . n A 1 3 CYS 3 3 3 CYS CYS A . n A 1 4 CYS 4 4 4 CYS CYS A . n A 1 5 PRO 5 5 5 PRO PRO A . n A 1 6 ASN 6 6 6 ASN ASN A . n A 1 7 THR 7 7 7 THR THR A . n A 1 8 THR 8 8 8 THR THR A . n A 1 9 GLY 9 9 9 GLY GLY A . n A 1 10 ARG 10 10 10 ARG ARG A . n A 1 11 ASP 11 11 11 ASP ASP A . n A 1 12 ILE 12 12 12 ILE ILE A . n A 1 13 TYR 13 13 13 TYR TYR A . n A 1 14 ASN 14 14 14 ASN ASN A . n A 1 15 THR 15 15 15 THR THR A . n A 1 16 CYS 16 16 16 CYS CYS A . n A 1 17 ARG 17 17 17 ARG ARG A . n A 1 18 LEU 18 18 18 LEU LEU A . n A 1 19 GLY 19 19 19 GLY GLY A . n A 1 20 GLY 20 20 20 GLY GLY A . n A 1 21 GLY 21 21 21 GLY GLY A . n A 1 22 SER 22 22 22 SER SER A . n A 1 23 ARG 23 23 23 ARG ARG A . n A 1 24 GLU 24 24 24 GLU GLU A . n A 1 25 ARG 25 25 25 ARG ARG A . n A 1 26 CYS 26 26 26 CYS CYS A . n A 1 27 ALA 27 27 27 ALA ALA A . n A 1 28 SER 28 28 28 SER SER A . n A 1 29 LEU 29 29 29 LEU LEU A . n A 1 30 SER 30 30 30 SER SER A . n A 1 31 GLY 31 31 31 GLY GLY A . n A 1 32 CYS 32 32 32 CYS CYS A . n A 1 33 LYS 33 33 33 LYS LYS A . n A 1 34 ILE 34 34 34 ILE ILE A . n A 1 35 ILE 35 35 35 ILE ILE A . n A 1 36 SER 36 36 36 SER SER A . n A 1 37 ALA 37 37 37 ALA ALA A . n A 1 38 SER 38 38 38 SER SER A . n A 1 39 THR 39 39 39 THR THR A . n A 1 40 CYS 40 40 40 CYS CYS A . n A 1 41 PRO 41 41 41 PRO PRO A . n A 1 42 SER 42 42 42 SER SER A . n A 1 43 ASP 43 43 43 ASP ASP A . n A 1 44 TYR 44 44 44 TYR TYR A . n A 1 45 PRO 45 45 45 PRO PRO A . n A 1 46 LYS 46 46 46 LYS LYS A . n B 1 1 LYS 1 1 1 LYS LYS B . n B 1 2 SER 2 2 2 SER SER B . n B 1 3 CYS 3 3 3 CYS CYS B . n B 1 4 CYS 4 4 4 CYS CYS B . n B 1 5 PRO 5 5 5 PRO PRO B . n B 1 6 ASN 6 6 6 ASN ASN B . n B 1 7 THR 7 7 7 THR THR B . n B 1 8 THR 8 8 8 THR THR B . n B 1 9 GLY 9 9 9 GLY GLY B . n B 1 10 ARG 10 10 10 ARG ARG B . n B 1 11 ASP 11 11 11 ASP ASP B . n B 1 12 ILE 12 12 12 ILE ILE B . n B 1 13 TYR 13 13 13 TYR TYR B . n B 1 14 ASN 14 14 14 ASN ASN B . n B 1 15 THR 15 15 15 THR THR B . n B 1 16 CYS 16 16 16 CYS CYS B . n B 1 17 ARG 17 17 17 ARG ARG B . n B 1 18 LEU 18 18 18 LEU LEU B . n B 1 19 GLY 19 19 19 GLY GLY B . n B 1 20 GLY 20 20 20 GLY GLY B . n B 1 21 GLY 21 21 21 GLY GLY B . n B 1 22 SER 22 22 22 SER SER B . n B 1 23 ARG 23 23 23 ARG ARG B . n B 1 24 GLU 24 24 24 GLU GLU B . n B 1 25 ARG 25 25 25 ARG ARG B . n B 1 26 CYS 26 26 26 CYS CYS B . n B 1 27 ALA 27 27 27 ALA ALA B . n B 1 28 SER 28 28 28 SER SER B . n B 1 29 LEU 29 29 29 LEU LEU B . n B 1 30 SER 30 30 30 SER SER B . n B 1 31 GLY 31 31 31 GLY GLY B . n B 1 32 CYS 32 32 32 CYS CYS B . n B 1 33 LYS 33 33 33 LYS LYS B . n B 1 34 ILE 34 34 34 ILE ILE B . n B 1 35 ILE 35 35 35 ILE ILE B . n B 1 36 SER 36 36 36 SER SER B . n B 1 37 ALA 37 37 37 ALA ALA B . n B 1 38 SER 38 38 38 SER SER B . n B 1 39 THR 39 39 39 THR THR B . n B 1 40 CYS 40 40 40 CYS CYS B . n B 1 41 PRO 41 41 41 PRO PRO B . n B 1 42 SER 42 42 42 SER SER B . n B 1 43 ASP 43 43 43 ASP ASP B . n B 1 44 TYR 44 44 44 TYR TYR B . n B 1 45 PRO 45 45 45 PRO PRO B . n B 1 46 LYS 46 46 46 LYS LYS B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 SO4 1 1047 1047 SO4 SO4 A . D 2 SO4 1 1048 1048 SO4 SO4 A . E 2 SO4 1 1049 1049 SO4 SO4 A . F 2 SO4 1 1050 1050 SO4 SO4 A . G 2 SO4 1 1047 1047 SO4 SO4 B . H 2 SO4 1 1048 1048 SO4 SO4 B . I 3 HOH 1 2001 2001 HOH HOH A . I 3 HOH 2 2002 2002 HOH HOH A . I 3 HOH 3 2003 2003 HOH HOH A . I 3 HOH 4 2004 2004 HOH HOH A . I 3 HOH 5 2005 2005 HOH HOH A . I 3 HOH 6 2006 2006 HOH HOH A . I 3 HOH 7 2007 2007 HOH HOH A . I 3 HOH 8 2008 2008 HOH HOH A . I 3 HOH 9 2009 2009 HOH HOH A . I 3 HOH 10 2010 2010 HOH HOH A . I 3 HOH 11 2011 2011 HOH HOH A . I 3 HOH 12 2012 2012 HOH HOH A . I 3 HOH 13 2013 2013 HOH HOH A . I 3 HOH 14 2014 2014 HOH HOH A . I 3 HOH 15 2015 2015 HOH HOH A . I 3 HOH 16 2016 2016 HOH HOH A . I 3 HOH 17 2017 2017 HOH HOH A . I 3 HOH 18 2018 2018 HOH HOH A . I 3 HOH 19 2019 2019 HOH HOH A . I 3 HOH 20 2020 2020 HOH HOH A . I 3 HOH 21 2021 2021 HOH HOH A . I 3 HOH 22 2022 2022 HOH HOH A . I 3 HOH 23 2023 2023 HOH HOH A . I 3 HOH 24 2024 2024 HOH HOH A . I 3 HOH 25 2025 2025 HOH HOH A . I 3 HOH 26 2026 2026 HOH HOH A . I 3 HOH 27 2027 2027 HOH HOH A . I 3 HOH 28 2028 2028 HOH HOH A . I 3 HOH 29 2029 2029 HOH HOH A . I 3 HOH 30 2030 2030 HOH HOH A . I 3 HOH 31 2031 2031 HOH HOH A . I 3 HOH 32 2032 2032 HOH HOH A . I 3 HOH 33 2033 2033 HOH HOH A . I 3 HOH 34 2034 2034 HOH HOH A . I 3 HOH 35 2035 2035 HOH HOH A . I 3 HOH 36 2036 2036 HOH HOH A . I 3 HOH 37 2037 2037 HOH HOH A . I 3 HOH 38 2038 2038 HOH HOH A . I 3 HOH 39 2039 2039 HOH HOH A . I 3 HOH 40 2040 2040 HOH HOH A . I 3 HOH 41 2041 2041 HOH HOH A . I 3 HOH 42 2042 2042 HOH HOH A . I 3 HOH 43 2043 2043 HOH HOH A . I 3 HOH 44 2044 2044 HOH HOH A . I 3 HOH 45 2045 2045 HOH HOH A . I 3 HOH 46 2046 2046 HOH HOH A . I 3 HOH 47 2047 2047 HOH HOH A . I 3 HOH 48 2048 2048 HOH HOH A . I 3 HOH 49 2049 2049 HOH HOH A . I 3 HOH 50 2050 2050 HOH HOH A . I 3 HOH 51 2051 2051 HOH HOH A . I 3 HOH 52 2052 2052 HOH HOH A . I 3 HOH 53 2053 2053 HOH HOH A . I 3 HOH 54 2054 2054 HOH HOH A . J 3 HOH 1 2001 2001 HOH HOH B . J 3 HOH 2 2002 2002 HOH HOH B . J 3 HOH 3 2003 2003 HOH HOH B . J 3 HOH 4 2004 2004 HOH HOH B . J 3 HOH 5 2005 2005 HOH HOH B . J 3 HOH 6 2006 2006 HOH HOH B . J 3 HOH 7 2007 2007 HOH HOH B . J 3 HOH 8 2008 2008 HOH HOH B . J 3 HOH 9 2009 2009 HOH HOH B . J 3 HOH 10 2010 2010 HOH HOH B . J 3 HOH 11 2011 2011 HOH HOH B . J 3 HOH 12 2012 2012 HOH HOH B . J 3 HOH 13 2013 2013 HOH HOH B . J 3 HOH 14 2014 2014 HOH HOH B . J 3 HOH 15 2015 2015 HOH HOH B . J 3 HOH 16 2016 2016 HOH HOH B . J 3 HOH 17 2017 2017 HOH HOH B . J 3 HOH 18 2018 2018 HOH HOH B . J 3 HOH 19 2019 2019 HOH HOH B . J 3 HOH 20 2020 2020 HOH HOH B . J 3 HOH 21 2021 2021 HOH HOH B . J 3 HOH 22 2022 2022 HOH HOH B . J 3 HOH 23 2023 2023 HOH HOH B . J 3 HOH 24 2024 2024 HOH HOH B . J 3 HOH 25 2025 2025 HOH HOH B . J 3 HOH 26 2026 2026 HOH HOH B . J 3 HOH 27 2027 2027 HOH HOH B . J 3 HOH 28 2028 2028 HOH HOH B . J 3 HOH 29 2029 2029 HOH HOH B . J 3 HOH 30 2030 2030 HOH HOH B . J 3 HOH 31 2031 2031 HOH HOH B . J 3 HOH 32 2032 2032 HOH HOH B . J 3 HOH 33 2033 2033 HOH HOH B . J 3 HOH 34 2034 2034 HOH HOH B . J 3 HOH 35 2035 2035 HOH HOH B . J 3 HOH 36 2036 2036 HOH HOH B . J 3 HOH 37 2037 2037 HOH HOH B . J 3 HOH 38 2038 2038 HOH HOH B . J 3 HOH 39 2039 2039 HOH HOH B . J 3 HOH 40 2040 2040 HOH HOH B . J 3 HOH 41 2041 2041 HOH HOH B . J 3 HOH 42 2042 2042 HOH HOH B . J 3 HOH 43 2043 2043 HOH HOH B . J 3 HOH 44 2044 2044 HOH HOH B . J 3 HOH 45 2045 2045 HOH HOH B . J 3 HOH 46 2046 2046 HOH HOH B . J 3 HOH 47 2047 2047 HOH HOH B . J 3 HOH 48 2048 2048 HOH HOH B . J 3 HOH 49 2049 2049 HOH HOH B . J 3 HOH 50 2050 2050 HOH HOH B . J 3 HOH 51 2051 2051 HOH HOH B . J 3 HOH 52 2052 2052 HOH HOH B . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PQS _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 970 ? 1 MORE -8.9 ? 1 'SSA (A^2)' 6550 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2008-06-17 2 'Structure model' 1 1 2011-05-08 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2018-10-24 5 'Structure model' 1 4 2019-05-08 6 'Structure model' 1 5 2019-07-10 7 'Structure model' 1 6 2019-07-24 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Structure summary' 6 5 'Structure model' 'Data collection' 7 5 'Structure model' 'Experimental preparation' 8 6 'Structure model' 'Data collection' 9 7 'Structure model' 'Data collection' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' citation 2 4 'Structure model' diffrn_source 3 4 'Structure model' struct 4 4 'Structure model' struct_ref_seq_dif 5 5 'Structure model' database_PDB_rev 6 5 'Structure model' database_PDB_rev_record 7 5 'Structure model' exptl_crystal_grow 8 6 'Structure model' diffrn_source 9 7 'Structure model' diffrn_source # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_citation.journal_abbrev' 2 4 'Structure model' '_citation.page_last' 3 4 'Structure model' '_citation.title' 4 4 'Structure model' '_diffrn_source.pdbx_synchrotron_site' 5 4 'Structure model' '_struct.title' 6 4 'Structure model' '_struct_ref_seq_dif.details' 7 5 'Structure model' '_exptl_crystal_grow.method' 8 6 'Structure model' '_diffrn_source.pdbx_synchrotron_site' 9 7 'Structure model' '_diffrn_source.pdbx_synchrotron_site' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal _software.date _software.type _software.location _software.language SHELXL-97 refinement . ? 1 ? ? ? ? DENZO 'data reduction' . ? 2 ? ? ? ? SADABS 'data scaling' . ? 3 ? ? ? ? SHELXD phasing . ? 4 ? ? ? ? # _pdbx_entry_details.entry_id 2V9B _pdbx_entry_details.compound_details ;ENGINEERED RESIDUE IN CHAIN A, ASN 17 TO ASP ENGINEERED RESIDUE IN CHAIN B, ASN 17 TO ASP ; _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details 'N11D KNOWN ISOFORM MUTATION' # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 CB A CYS 16 ? B SG A CYS 16 ? ? 1.629 1.812 -0.183 0.016 N 2 1 CB A CYS 26 ? B SG A CYS 26 ? ? 2.050 1.818 0.232 0.017 N 3 1 CB B CYS 16 ? B SG B CYS 16 ? ? 1.649 1.812 -0.163 0.016 N 4 1 CB B CYS 32 ? B SG B CYS 32 ? ? 1.935 1.818 0.117 0.017 N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 NH1 A ARG 10 ? ? CZ A ARG 10 ? ? NH2 A ARG 10 ? ? 126.20 119.40 6.80 1.10 N 2 1 NE A ARG 10 ? ? CZ A ARG 10 ? ? NH1 A ARG 10 ? ? 116.05 120.30 -4.25 0.50 N 3 1 CA A CYS 16 ? ? CB A CYS 16 ? B SG A CYS 16 ? ? 125.93 114.20 11.73 1.10 N 4 1 NE A ARG 17 ? ? CZ A ARG 17 ? ? NH2 A ARG 17 ? ? 116.27 120.30 -4.03 0.50 N 5 1 CA A CYS 26 ? ? CB A CYS 26 ? B SG A CYS 26 ? ? 101.82 114.00 -12.18 1.80 N 6 1 CB A ASP 43 ? ? CG A ASP 43 ? ? OD2 A ASP 43 ? ? 127.49 118.30 9.19 0.90 N 7 1 CA B CYS 16 ? ? CB B CYS 16 ? B SG B CYS 16 ? ? 125.53 114.20 11.33 1.10 N 8 1 NE B ARG 17 ? ? CZ B ARG 17 ? ? NH1 B ARG 17 ? ? 124.67 120.30 4.37 0.50 N 9 1 NE B ARG 17 ? ? CZ B ARG 17 ? ? NH2 B ARG 17 ? ? 115.48 120.30 -4.82 0.50 N 10 1 NE B ARG 23 ? ? CZ B ARG 23 ? ? NH1 B ARG 23 ? ? 123.44 120.30 3.14 0.50 N 11 1 NE B ARG 23 ? ? CZ B ARG 23 ? ? NH2 B ARG 23 ? ? 115.10 120.30 -5.20 0.50 N 12 1 CB B ASP 43 ? ? CG B ASP 43 ? ? OD1 B ASP 43 ? ? 125.05 118.30 6.75 0.90 N # _pdbx_validate_torsion.id 1 _pdbx_validate_torsion.PDB_model_num 1 _pdbx_validate_torsion.auth_comp_id SER _pdbx_validate_torsion.auth_asym_id B _pdbx_validate_torsion.auth_seq_id 36 _pdbx_validate_torsion.PDB_ins_code ? _pdbx_validate_torsion.label_alt_id ? _pdbx_validate_torsion.phi -96.69 _pdbx_validate_torsion.psi 44.24 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 B GLU 24 ? CG ? B GLU 24 CG 2 1 Y 1 B GLU 24 ? CD ? B GLU 24 CD 3 1 Y 1 B GLU 24 ? OE1 ? B GLU 24 OE1 4 1 Y 1 B GLU 24 ? OE2 ? B GLU 24 OE2 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'SULFATE ION' SO4 3 water HOH #