data_2VFL # _entry.id 2VFL # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.391 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2VFL pdb_00002vfl 10.2210/pdb2vfl/pdb PDBE EBI-34342 ? ? WWPDB D_1290034342 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2008-05-06 2 'Structure model' 1 1 2011-05-08 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2024-05-01 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' Other 6 4 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' chem_comp_atom 2 4 'Structure model' chem_comp_bond 3 4 'Structure model' database_2 4 4 'Structure model' pdbx_database_status 5 4 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_pdbx_database_status.status_code_sf' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 2VFL _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.SG_entry . _pdbx_database_status.recvd_initial_deposition_date 2007-11-05 _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Gold, M.G.' 1 'Smith, F.D.' 2 'Scott, J.D.' 3 'Barford, D.' 4 # _citation.id primary _citation.title 'Akap18 Contains a Phosphoesterase Domain that Binds AMP' _citation.journal_abbrev J.Mol.Biol. _citation.journal_volume 375 _citation.page_first 1329 _citation.page_last ? _citation.year 2008 _citation.journal_id_ASTM JMOBAK _citation.country UK _citation.journal_id_ISSN 0022-2836 _citation.journal_id_CSD 0070 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 18082768 _citation.pdbx_database_id_DOI 10.1016/J.JMB.2007.11.037 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Gold, M.G.' 1 ? primary 'Smith, F.D.' 2 ? primary 'Scott, J.D.' 3 ? primary 'Barford, D.' 4 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'AKAP18 DELTA' 23226.936 1 ? ? 'RESIDUES 88-292' '2H PHOSPHOESTERASE DOMAIN' 2 non-polymer syn "CYTIDINE-5'-MONOPHOSPHATE" 323.197 1 ? ? ? ? 3 water nat water 18.015 36 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;YQPNYFLSIPITNKKITAGIKVLQNSILRQDNRLTKAMVGDGSFHITLLVMQLLNEDEVNIGTDALLELKPFVEEILEGK HLTLPFHGIGTFQGQVGFVKLADGDHVSALLEIAETAKRTFQEKGILAGESRTFKPHLTFMKLSKAPMLWKKGVRKIEPG LYEQFIDHRFGEEILYQIDLCSMLKKKQSNGYYHCESSIVIGEKD ; _entity_poly.pdbx_seq_one_letter_code_can ;YQPNYFLSIPITNKKITAGIKVLQNSILRQDNRLTKAMVGDGSFHITLLVMQLLNEDEVNIGTDALLELKPFVEEILEGK HLTLPFHGIGTFQGQVGFVKLADGDHVSALLEIAETAKRTFQEKGILAGESRTFKPHLTFMKLSKAPMLWKKGVRKIEPG LYEQFIDHRFGEEILYQIDLCSMLKKKQSNGYYHCESSIVIGEKD ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 "CYTIDINE-5'-MONOPHOSPHATE" C5P 3 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 TYR n 1 2 GLN n 1 3 PRO n 1 4 ASN n 1 5 TYR n 1 6 PHE n 1 7 LEU n 1 8 SER n 1 9 ILE n 1 10 PRO n 1 11 ILE n 1 12 THR n 1 13 ASN n 1 14 LYS n 1 15 LYS n 1 16 ILE n 1 17 THR n 1 18 ALA n 1 19 GLY n 1 20 ILE n 1 21 LYS n 1 22 VAL n 1 23 LEU n 1 24 GLN n 1 25 ASN n 1 26 SER n 1 27 ILE n 1 28 LEU n 1 29 ARG n 1 30 GLN n 1 31 ASP n 1 32 ASN n 1 33 ARG n 1 34 LEU n 1 35 THR n 1 36 LYS n 1 37 ALA n 1 38 MET n 1 39 VAL n 1 40 GLY n 1 41 ASP n 1 42 GLY n 1 43 SER n 1 44 PHE n 1 45 HIS n 1 46 ILE n 1 47 THR n 1 48 LEU n 1 49 LEU n 1 50 VAL n 1 51 MET n 1 52 GLN n 1 53 LEU n 1 54 LEU n 1 55 ASN n 1 56 GLU n 1 57 ASP n 1 58 GLU n 1 59 VAL n 1 60 ASN n 1 61 ILE n 1 62 GLY n 1 63 THR n 1 64 ASP n 1 65 ALA n 1 66 LEU n 1 67 LEU n 1 68 GLU n 1 69 LEU n 1 70 LYS n 1 71 PRO n 1 72 PHE n 1 73 VAL n 1 74 GLU n 1 75 GLU n 1 76 ILE n 1 77 LEU n 1 78 GLU n 1 79 GLY n 1 80 LYS n 1 81 HIS n 1 82 LEU n 1 83 THR n 1 84 LEU n 1 85 PRO n 1 86 PHE n 1 87 HIS n 1 88 GLY n 1 89 ILE n 1 90 GLY n 1 91 THR n 1 92 PHE n 1 93 GLN n 1 94 GLY n 1 95 GLN n 1 96 VAL n 1 97 GLY n 1 98 PHE n 1 99 VAL n 1 100 LYS n 1 101 LEU n 1 102 ALA n 1 103 ASP n 1 104 GLY n 1 105 ASP n 1 106 HIS n 1 107 VAL n 1 108 SER n 1 109 ALA n 1 110 LEU n 1 111 LEU n 1 112 GLU n 1 113 ILE n 1 114 ALA n 1 115 GLU n 1 116 THR n 1 117 ALA n 1 118 LYS n 1 119 ARG n 1 120 THR n 1 121 PHE n 1 122 GLN n 1 123 GLU n 1 124 LYS n 1 125 GLY n 1 126 ILE n 1 127 LEU n 1 128 ALA n 1 129 GLY n 1 130 GLU n 1 131 SER n 1 132 ARG n 1 133 THR n 1 134 PHE n 1 135 LYS n 1 136 PRO n 1 137 HIS n 1 138 LEU n 1 139 THR n 1 140 PHE n 1 141 MET n 1 142 LYS n 1 143 LEU n 1 144 SER n 1 145 LYS n 1 146 ALA n 1 147 PRO n 1 148 MET n 1 149 LEU n 1 150 TRP n 1 151 LYS n 1 152 LYS n 1 153 GLY n 1 154 VAL n 1 155 ARG n 1 156 LYS n 1 157 ILE n 1 158 GLU n 1 159 PRO n 1 160 GLY n 1 161 LEU n 1 162 TYR n 1 163 GLU n 1 164 GLN n 1 165 PHE n 1 166 ILE n 1 167 ASP n 1 168 HIS n 1 169 ARG n 1 170 PHE n 1 171 GLY n 1 172 GLU n 1 173 GLU n 1 174 ILE n 1 175 LEU n 1 176 TYR n 1 177 GLN n 1 178 ILE n 1 179 ASP n 1 180 LEU n 1 181 CYS n 1 182 SER n 1 183 MET n 1 184 LEU n 1 185 LYS n 1 186 LYS n 1 187 LYS n 1 188 GLN n 1 189 SER n 1 190 ASN n 1 191 GLY n 1 192 TYR n 1 193 TYR n 1 194 HIS n 1 195 CYS n 1 196 GLU n 1 197 SER n 1 198 SER n 1 199 ILE n 1 200 VAL n 1 201 ILE n 1 202 GLY n 1 203 GLU n 1 204 LYS n 1 205 ASP n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name HUMAN _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'HOMO SAPIENS' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'ESCHERICHIA COLI' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 511693 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain BL21 _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name PGEX6P1 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 C5P non-polymer . "CYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O8 P' 323.197 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 TYR 1 88 88 TYR TYR A . n A 1 2 GLN 2 89 89 GLN GLN A . n A 1 3 PRO 3 90 90 PRO PRO A . n A 1 4 ASN 4 91 91 ASN ASN A . n A 1 5 TYR 5 92 92 TYR TYR A . n A 1 6 PHE 6 93 93 PHE PHE A . n A 1 7 LEU 7 94 94 LEU LEU A . n A 1 8 SER 8 95 95 SER SER A . n A 1 9 ILE 9 96 96 ILE ILE A . n A 1 10 PRO 10 97 97 PRO PRO A . n A 1 11 ILE 11 98 98 ILE ILE A . n A 1 12 THR 12 99 99 THR THR A . n A 1 13 ASN 13 100 100 ASN ASN A . n A 1 14 LYS 14 101 101 LYS LYS A . n A 1 15 LYS 15 102 102 LYS LYS A . n A 1 16 ILE 16 103 103 ILE ILE A . n A 1 17 THR 17 104 104 THR THR A . n A 1 18 ALA 18 105 105 ALA ALA A . n A 1 19 GLY 19 106 106 GLY GLY A . n A 1 20 ILE 20 107 107 ILE ILE A . n A 1 21 LYS 21 108 108 LYS LYS A . n A 1 22 VAL 22 109 109 VAL VAL A . n A 1 23 LEU 23 110 110 LEU LEU A . n A 1 24 GLN 24 111 111 GLN GLN A . n A 1 25 ASN 25 112 112 ASN ASN A . n A 1 26 SER 26 113 113 SER SER A . n A 1 27 ILE 27 114 114 ILE ILE A . n A 1 28 LEU 28 115 115 LEU LEU A . n A 1 29 ARG 29 116 116 ARG ARG A . n A 1 30 GLN 30 117 117 GLN GLN A . n A 1 31 ASP 31 118 118 ASP ASP A . n A 1 32 ASN 32 119 119 ASN ASN A . n A 1 33 ARG 33 120 120 ARG ARG A . n A 1 34 LEU 34 121 121 LEU LEU A . n A 1 35 THR 35 122 122 THR THR A . n A 1 36 LYS 36 123 123 LYS LYS A . n A 1 37 ALA 37 124 124 ALA ALA A . n A 1 38 MET 38 125 125 MET MET A . n A 1 39 VAL 39 126 126 VAL VAL A . n A 1 40 GLY 40 127 127 GLY GLY A . n A 1 41 ASP 41 128 128 ASP ASP A . n A 1 42 GLY 42 129 129 GLY GLY A . n A 1 43 SER 43 130 130 SER SER A . n A 1 44 PHE 44 131 131 PHE PHE A . n A 1 45 HIS 45 132 132 HIS HIS A . n A 1 46 ILE 46 133 133 ILE ILE A . n A 1 47 THR 47 134 134 THR THR A . n A 1 48 LEU 48 135 135 LEU LEU A . n A 1 49 LEU 49 136 136 LEU LEU A . n A 1 50 VAL 50 137 137 VAL VAL A . n A 1 51 MET 51 138 138 MET MET A . n A 1 52 GLN 52 139 139 GLN GLN A . n A 1 53 LEU 53 140 140 LEU LEU A . n A 1 54 LEU 54 141 141 LEU LEU A . n A 1 55 ASN 55 142 142 ASN ASN A . n A 1 56 GLU 56 143 143 GLU GLU A . n A 1 57 ASP 57 144 144 ASP ASP A . n A 1 58 GLU 58 145 145 GLU GLU A . n A 1 59 VAL 59 146 146 VAL VAL A . n A 1 60 ASN 60 147 147 ASN ASN A . n A 1 61 ILE 61 148 148 ILE ILE A . n A 1 62 GLY 62 149 149 GLY GLY A . n A 1 63 THR 63 150 150 THR THR A . n A 1 64 ASP 64 151 151 ASP ASP A . n A 1 65 ALA 65 152 152 ALA ALA A . n A 1 66 LEU 66 153 153 LEU LEU A . n A 1 67 LEU 67 154 154 LEU LEU A . n A 1 68 GLU 68 155 155 GLU GLU A . n A 1 69 LEU 69 156 156 LEU LEU A . n A 1 70 LYS 70 157 157 LYS LYS A . n A 1 71 PRO 71 158 158 PRO PRO A . n A 1 72 PHE 72 159 159 PHE PHE A . n A 1 73 VAL 73 160 160 VAL VAL A . n A 1 74 GLU 74 161 161 GLU GLU A . n A 1 75 GLU 75 162 162 GLU GLU A . n A 1 76 ILE 76 163 163 ILE ILE A . n A 1 77 LEU 77 164 164 LEU LEU A . n A 1 78 GLU 78 165 165 GLU GLU A . n A 1 79 GLY 79 166 166 GLY GLY A . n A 1 80 LYS 80 167 167 LYS LYS A . n A 1 81 HIS 81 168 168 HIS HIS A . n A 1 82 LEU 82 169 169 LEU LEU A . n A 1 83 THR 83 170 170 THR THR A . n A 1 84 LEU 84 171 171 LEU LEU A . n A 1 85 PRO 85 172 172 PRO PRO A . n A 1 86 PHE 86 173 173 PHE PHE A . n A 1 87 HIS 87 174 174 HIS HIS A . n A 1 88 GLY 88 175 175 GLY GLY A . n A 1 89 ILE 89 176 176 ILE ILE A . n A 1 90 GLY 90 177 177 GLY GLY A . n A 1 91 THR 91 178 178 THR THR A . n A 1 92 PHE 92 179 179 PHE PHE A . n A 1 93 GLN 93 180 180 GLN GLN A . n A 1 94 GLY 94 181 181 GLY GLY A . n A 1 95 GLN 95 182 182 GLN GLN A . n A 1 96 VAL 96 183 183 VAL VAL A . n A 1 97 GLY 97 184 184 GLY GLY A . n A 1 98 PHE 98 185 185 PHE PHE A . n A 1 99 VAL 99 186 186 VAL VAL A . n A 1 100 LYS 100 187 187 LYS LYS A . n A 1 101 LEU 101 188 188 LEU LEU A . n A 1 102 ALA 102 189 189 ALA ALA A . n A 1 103 ASP 103 190 190 ASP ASP A . n A 1 104 GLY 104 191 191 GLY GLY A . n A 1 105 ASP 105 192 192 ASP ASP A . n A 1 106 HIS 106 193 193 HIS HIS A . n A 1 107 VAL 107 194 194 VAL VAL A . n A 1 108 SER 108 195 195 SER SER A . n A 1 109 ALA 109 196 196 ALA ALA A . n A 1 110 LEU 110 197 197 LEU LEU A . n A 1 111 LEU 111 198 198 LEU LEU A . n A 1 112 GLU 112 199 199 GLU GLU A . n A 1 113 ILE 113 200 200 ILE ILE A . n A 1 114 ALA 114 201 201 ALA ALA A . n A 1 115 GLU 115 202 202 GLU GLU A . n A 1 116 THR 116 203 203 THR THR A . n A 1 117 ALA 117 204 204 ALA ALA A . n A 1 118 LYS 118 205 205 LYS LYS A . n A 1 119 ARG 119 206 206 ARG ARG A . n A 1 120 THR 120 207 207 THR THR A . n A 1 121 PHE 121 208 208 PHE PHE A . n A 1 122 GLN 122 209 209 GLN GLN A . n A 1 123 GLU 123 210 210 GLU GLU A . n A 1 124 LYS 124 211 211 LYS LYS A . n A 1 125 GLY 125 212 212 GLY GLY A . n A 1 126 ILE 126 213 213 ILE ILE A . n A 1 127 LEU 127 214 214 LEU LEU A . n A 1 128 ALA 128 215 215 ALA ALA A . n A 1 129 GLY 129 216 216 GLY GLY A . n A 1 130 GLU 130 217 217 GLU GLU A . n A 1 131 SER 131 218 218 SER SER A . n A 1 132 ARG 132 219 219 ARG ARG A . n A 1 133 THR 133 220 220 THR THR A . n A 1 134 PHE 134 221 221 PHE PHE A . n A 1 135 LYS 135 222 222 LYS LYS A . n A 1 136 PRO 136 223 223 PRO PRO A . n A 1 137 HIS 137 224 224 HIS HIS A . n A 1 138 LEU 138 225 225 LEU LEU A . n A 1 139 THR 139 226 226 THR THR A . n A 1 140 PHE 140 227 227 PHE PHE A . n A 1 141 MET 141 228 228 MET MET A . n A 1 142 LYS 142 229 229 LYS LYS A . n A 1 143 LEU 143 230 230 LEU LEU A . n A 1 144 SER 144 231 231 SER SER A . n A 1 145 LYS 145 232 232 LYS LYS A . n A 1 146 ALA 146 233 233 ALA ALA A . n A 1 147 PRO 147 234 234 PRO PRO A . n A 1 148 MET 148 235 235 MET MET A . n A 1 149 LEU 149 236 236 LEU LEU A . n A 1 150 TRP 150 237 237 TRP TRP A . n A 1 151 LYS 151 238 238 LYS LYS A . n A 1 152 LYS 152 239 239 LYS LYS A . n A 1 153 GLY 153 240 240 GLY GLY A . n A 1 154 VAL 154 241 241 VAL VAL A . n A 1 155 ARG 155 242 242 ARG ARG A . n A 1 156 LYS 156 243 243 LYS LYS A . n A 1 157 ILE 157 244 244 ILE ILE A . n A 1 158 GLU 158 245 245 GLU GLU A . n A 1 159 PRO 159 246 246 PRO PRO A . n A 1 160 GLY 160 247 247 GLY GLY A . n A 1 161 LEU 161 248 248 LEU LEU A . n A 1 162 TYR 162 249 249 TYR TYR A . n A 1 163 GLU 163 250 250 GLU GLU A . n A 1 164 GLN 164 251 251 GLN GLN A . n A 1 165 PHE 165 252 252 PHE PHE A . n A 1 166 ILE 166 253 253 ILE ILE A . n A 1 167 ASP 167 254 254 ASP ASP A . n A 1 168 HIS 168 255 255 HIS HIS A . n A 1 169 ARG 169 256 256 ARG ARG A . n A 1 170 PHE 170 257 257 PHE PHE A . n A 1 171 GLY 171 258 258 GLY GLY A . n A 1 172 GLU 172 259 259 GLU GLU A . n A 1 173 GLU 173 260 260 GLU GLU A . n A 1 174 ILE 174 261 261 ILE ILE A . n A 1 175 LEU 175 262 262 LEU LEU A . n A 1 176 TYR 176 263 263 TYR TYR A . n A 1 177 GLN 177 264 264 GLN GLN A . n A 1 178 ILE 178 265 265 ILE ILE A . n A 1 179 ASP 179 266 266 ASP ASP A . n A 1 180 LEU 180 267 267 LEU LEU A . n A 1 181 CYS 181 268 268 CYS CYS A . n A 1 182 SER 182 269 269 SER SER A . n A 1 183 MET 183 270 270 MET MET A . n A 1 184 LEU 184 271 271 LEU LEU A . n A 1 185 LYS 185 272 272 LYS LYS A . n A 1 186 LYS 186 273 273 LYS LYS A . n A 1 187 LYS 187 274 274 LYS LYS A . n A 1 188 GLN 188 275 275 GLN GLN A . n A 1 189 SER 189 276 276 SER SER A . n A 1 190 ASN 190 277 277 ASN ASN A . n A 1 191 GLY 191 278 278 GLY GLY A . n A 1 192 TYR 192 279 279 TYR TYR A . n A 1 193 TYR 193 280 280 TYR TYR A . n A 1 194 HIS 194 281 281 HIS HIS A . n A 1 195 CYS 195 282 282 CYS CYS A . n A 1 196 GLU 196 283 283 GLU GLU A . n A 1 197 SER 197 284 284 SER SER A . n A 1 198 SER 198 285 285 SER SER A . n A 1 199 ILE 199 286 286 ILE ILE A . n A 1 200 VAL 200 287 287 VAL VAL A . n A 1 201 ILE 201 288 288 ILE ILE A . n A 1 202 GLY 202 289 289 GLY GLY A . n A 1 203 GLU 203 290 290 GLU GLU A . n A 1 204 LYS 204 291 291 LYS LYS A . n A 1 205 ASP 205 292 292 ASP ASP A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 C5P 1 1293 1293 C5P C5P A . C 3 HOH 1 2001 2001 HOH HOH A . C 3 HOH 2 2002 2002 HOH HOH A . C 3 HOH 3 2003 2003 HOH HOH A . C 3 HOH 4 2004 2004 HOH HOH A . C 3 HOH 5 2005 2005 HOH HOH A . C 3 HOH 6 2006 2006 HOH HOH A . C 3 HOH 7 2007 2007 HOH HOH A . C 3 HOH 8 2008 2008 HOH HOH A . C 3 HOH 9 2009 2009 HOH HOH A . C 3 HOH 10 2010 2010 HOH HOH A . C 3 HOH 11 2011 2011 HOH HOH A . C 3 HOH 12 2012 2012 HOH HOH A . C 3 HOH 13 2013 2013 HOH HOH A . C 3 HOH 14 2014 2014 HOH HOH A . C 3 HOH 15 2015 2015 HOH HOH A . C 3 HOH 16 2016 2016 HOH HOH A . C 3 HOH 17 2017 2017 HOH HOH A . C 3 HOH 18 2018 2018 HOH HOH A . C 3 HOH 19 2019 2019 HOH HOH A . C 3 HOH 20 2020 2020 HOH HOH A . C 3 HOH 21 2021 2021 HOH HOH A . C 3 HOH 22 2022 2022 HOH HOH A . C 3 HOH 23 2023 2023 HOH HOH A . C 3 HOH 24 2024 2024 HOH HOH A . C 3 HOH 25 2025 2025 HOH HOH A . C 3 HOH 26 2026 2026 HOH HOH A . C 3 HOH 27 2027 2027 HOH HOH A . C 3 HOH 28 2028 2028 HOH HOH A . C 3 HOH 29 2029 2029 HOH HOH A . C 3 HOH 30 2030 2030 HOH HOH A . C 3 HOH 31 2031 2031 HOH HOH A . C 3 HOH 32 2032 2032 HOH HOH A . C 3 HOH 33 2033 2033 HOH HOH A . C 3 HOH 34 2034 2034 HOH HOH A . C 3 HOH 35 2035 2035 HOH HOH A . C 3 HOH 36 2036 2036 HOH HOH A . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A TRP 237 ? CG ? A TRP 150 CG 2 1 Y 1 A TRP 237 ? CD1 ? A TRP 150 CD1 3 1 Y 1 A TRP 237 ? CD2 ? A TRP 150 CD2 4 1 Y 1 A TRP 237 ? NE1 ? A TRP 150 NE1 5 1 Y 1 A TRP 237 ? CE2 ? A TRP 150 CE2 6 1 Y 1 A TRP 237 ? CE3 ? A TRP 150 CE3 7 1 Y 1 A TRP 237 ? CZ2 ? A TRP 150 CZ2 8 1 Y 1 A TRP 237 ? CZ3 ? A TRP 150 CZ3 9 1 Y 1 A TRP 237 ? CH2 ? A TRP 150 CH2 10 1 Y 1 A LYS 238 ? CG ? A LYS 151 CG 11 1 Y 1 A LYS 238 ? CD ? A LYS 151 CD 12 1 Y 1 A LYS 238 ? CE ? A LYS 151 CE 13 1 Y 1 A LYS 238 ? NZ ? A LYS 151 NZ # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal REFMAC refinement 5.2.0019 ? 1 MOSFLM 'data reduction' . ? 2 SCALA 'data scaling' . ? 3 PHASER phasing . ? 4 # _cell.entry_id 2VFL _cell.length_a 42.968 _cell.length_b 42.968 _cell.length_c 97.974 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 3 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2VFL _symmetry.space_group_name_H-M 'P 31' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 144 # _exptl.entry_id 2VFL _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.1 _exptl_crystal.density_percent_sol 42 _exptl_crystal.description NONE # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method ? _exptl_crystal_grow.temp ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.5 _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details '0.1 M TRIS HCL PH 8, 10 % PEG 8K, 7 MM DTT' # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC CCD' _diffrn_detector.pdbx_collection_date 2005-11-30 _diffrn_detector.details MIRRORS # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator SILICON _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9794 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'ESRF BEAMLINE ID14-3' _diffrn_source.pdbx_synchrotron_site ESRF _diffrn_source.pdbx_synchrotron_beamline ID14-3 _diffrn_source.pdbx_wavelength 0.9794 _diffrn_source.pdbx_wavelength_list ? # _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.entry_id 2VFL _reflns.observed_criterion_sigma_I 2.5 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 98.06 _reflns.d_resolution_high 2.25 _reflns.number_obs 9559 _reflns.number_all ? _reflns.percent_possible_obs 99.5 _reflns.pdbx_Rmerge_I_obs 0.09 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 13.60 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 4.1 # _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_ordinal 1 _reflns_shell.d_res_high 2.25 _reflns_shell.d_res_low 2.31 _reflns_shell.percent_possible_all 98.4 _reflns_shell.Rmerge_I_obs 0.30 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 5.20 _reflns_shell.pdbx_redundancy 3.9 # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 2VFL _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 9095 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 98.06 _refine.ls_d_res_high 2.25 _refine.ls_percent_reflns_obs 99.3 _refine.ls_R_factor_obs 0.226 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.225 _refine.ls_R_factor_R_free 0.262 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 4.800 _refine.ls_number_reflns_R_free 460 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.916 _refine.correlation_coeff_Fo_to_Fc_free 0.881 _refine.B_iso_mean 19.26 _refine.aniso_B[1][1] 0.66000 _refine.aniso_B[2][2] 0.66000 _refine.aniso_B[3][3] -0.99000 _refine.aniso_B[1][2] 0.33000 _refine.aniso_B[1][3] 0.00000 _refine.aniso_B[2][3] 0.00000 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.40 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS.' _refine.pdbx_starting_model 'APO STRUCTURE' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.437 _refine.pdbx_overall_ESU_R_Free 0.258 _refine.overall_SU_ML 0.195 _refine.pdbx_overall_phase_error ? _refine.overall_SU_B 15.727 _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1620 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 21 _refine_hist.number_atoms_solvent 36 _refine_hist.number_atoms_total 1677 _refine_hist.d_res_high 2.25 _refine_hist.d_res_low 98.06 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.015 0.022 ? 1686 'X-RAY DIFFRACTION' ? r_bond_other_d ? ? ? ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.721 1.993 ? 2274 'X-RAY DIFFRACTION' ? r_angle_other_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 6.297 5.000 ? 208 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 31.357 25.000 ? 72 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 14.212 15.000 ? 319 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 24.386 15.000 ? 6 'X-RAY DIFFRACTION' ? r_chiral_restr 0.132 0.200 ? 257 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.005 0.020 ? 1230 'X-RAY DIFFRACTION' ? r_gen_planes_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_refined 0.193 0.200 ? 713 'X-RAY DIFFRACTION' ? r_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_refined 0.302 0.200 ? 1149 'X-RAY DIFFRACTION' ? r_nbtor_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 0.141 0.200 ? 59 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 0.295 0.200 ? 40 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 0.151 0.200 ? 8 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 0.703 1.500 ? 1073 'X-RAY DIFFRACTION' ? r_mcbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcangle_it 1.145 2.000 ? 1651 'X-RAY DIFFRACTION' ? r_mcangle_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_scbond_it 1.622 3.000 ? 702 'X-RAY DIFFRACTION' ? r_scbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_scangle_it 2.490 4.500 ? 622 'X-RAY DIFFRACTION' ? r_scangle_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_long_range_B_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_long_range_B_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 2.25 _refine_ls_shell.d_res_low 2.31 _refine_ls_shell.number_reflns_R_work 637 _refine_ls_shell.R_factor_R_work 0.2680 _refine_ls_shell.percent_reflns_obs ? _refine_ls_shell.R_factor_R_free 0.3830 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 36 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? # _database_PDB_matrix.entry_id 2VFL _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 2VFL _struct.title 'AKAP18 delta central domain - CMP' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2VFL _struct_keywords.pdbx_keywords HYDROLASE _struct_keywords.text 'APO, HYDROLASE, PHOSPHOESTERASE, CAMP, AKAP, PKA, SCAFFOLD, CMP' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? # _struct_ref.id 1 _struct_ref.db_name PDB _struct_ref.db_code 2VFL _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin ? _struct_ref.pdbx_db_accession 2VFL _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 2VFL _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 205 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession 2VFL _struct_ref_seq.db_align_beg 88 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 292 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 88 _struct_ref_seq.pdbx_auth_seq_align_end 292 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PQS _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ASN A 13 ? ASP A 31 ? ASN A 100 ASP A 118 1 ? 19 HELX_P HELX_P2 2 ASN A 32 ? ALA A 37 ? ASN A 119 ALA A 124 5 ? 6 HELX_P HELX_P3 3 ASN A 55 ? GLU A 78 ? ASN A 142 GLU A 165 1 ? 24 HELX_P HELX_P4 4 ASP A 105 ? GLU A 123 ? ASP A 192 GLU A 210 1 ? 19 HELX_P HELX_P5 5 ALA A 146 ? LYS A 152 ? ALA A 233 LYS A 239 1 ? 7 HELX_P HELX_P6 6 GLU A 158 ? TYR A 162 ? GLU A 245 TYR A 249 5 ? 5 HELX_P HELX_P7 7 TYR A 162 ? ILE A 166 ? TYR A 249 ILE A 253 5 ? 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA ? 4 ? AB ? 4 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA 1 2 ? anti-parallel AA 2 3 ? anti-parallel AA 3 4 ? anti-parallel AB 1 2 ? anti-parallel AB 2 3 ? anti-parallel AB 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA 1 HIS A 45 ? MET A 51 ? HIS A 132 MET A 138 AA 2 TYR A 5 ? PRO A 10 ? TYR A 92 PRO A 97 AA 3 GLN A 177 ? SER A 182 ? GLN A 264 SER A 269 AA 4 HIS A 194 ? VAL A 200 ? HIS A 281 VAL A 287 AB 1 HIS A 137 ? LYS A 142 ? HIS A 224 LYS A 229 AB 2 VAL A 96 ? LEU A 101 ? VAL A 183 LEU A 188 AB 3 THR A 83 ? PHE A 92 ? THR A 170 PHE A 179 AB 4 ARG A 169 ? ILE A 174 ? ARG A 256 ILE A 261 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA 1 2 N MET A 51 ? N MET A 138 O TYR A 5 ? O TYR A 92 AA 2 3 N SER A 8 ? N SER A 95 O ASP A 179 ? O ASP A 266 AA 3 4 N SER A 182 ? N SER A 269 O HIS A 194 ? O HIS A 281 AB 1 2 N PHE A 140 ? N PHE A 227 O GLY A 97 ? O GLY A 184 AB 2 3 O LYS A 100 ? O LYS A 187 N HIS A 87 ? N HIS A 174 AB 3 4 O PHE A 86 ? O PHE A 173 N PHE A 170 ? N PHE A 257 # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id ? _struct_site.pdbx_auth_comp_id ? _struct_site.pdbx_auth_seq_id ? _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 9 _struct_site.details 'BINDING SITE FOR RESIDUE C5P A1293' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 9 THR A 47 ? THR A 134 . ? 1_555 ? 2 AC1 9 PHE A 92 ? PHE A 179 . ? 1_555 ? 3 AC1 9 VAL A 96 ? VAL A 183 . ? 1_555 ? 4 AC1 9 ARG A 132 ? ARG A 219 . ? 1_555 ? 5 AC1 9 HIS A 137 ? HIS A 224 . ? 1_555 ? 6 AC1 9 THR A 139 ? THR A 226 . ? 1_555 ? 7 AC1 9 LYS A 204 ? LYS A 291 . ? 1_555 ? 8 AC1 9 HOH C . ? HOH A 2021 . ? 1_555 ? 9 AC1 9 HOH C . ? HOH A 2036 . ? 1_555 ? # loop_ _pdbx_validate_chiral.id _pdbx_validate_chiral.PDB_model_num _pdbx_validate_chiral.auth_atom_id _pdbx_validate_chiral.label_alt_id _pdbx_validate_chiral.auth_asym_id _pdbx_validate_chiral.auth_comp_id _pdbx_validate_chiral.auth_seq_id _pdbx_validate_chiral.PDB_ins_code _pdbx_validate_chiral.details _pdbx_validate_chiral.omega 1 1 "C4'" ? A C5P 1293 ? 'WRONG HAND' . 2 1 "C1'" ? A C5P 1293 ? 'WRONG HAND' . # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 C5P O3P O N N 74 C5P P P N N 75 C5P O1P O N N 76 C5P O2P O N N 77 C5P "O5'" O N N 78 C5P "C5'" C N N 79 C5P "C4'" C N R 80 C5P "O4'" O N N 81 C5P "C3'" C N S 82 C5P "O3'" O N N 83 C5P "C2'" C N R 84 C5P "O2'" O N N 85 C5P "C1'" C N R 86 C5P N1 N N N 87 C5P C2 C N N 88 C5P N3 N N N 89 C5P C4 C N N 90 C5P C5 C N N 91 C5P C6 C N N 92 C5P O2 O N N 93 C5P N4 N N N 94 C5P HOP3 H N N 95 C5P HOP2 H N N 96 C5P "H5'1" H N N 97 C5P "H5'2" H N N 98 C5P "H4'" H N N 99 C5P "H3'" H N N 100 C5P "HO3'" H N N 101 C5P "H2'1" H N N 102 C5P "HO2'" H N N 103 C5P "H1'" H N N 104 C5P H5 H N N 105 C5P H6 H N N 106 C5P HN41 H N N 107 C5P HN42 H N N 108 CYS N N N N 109 CYS CA C N R 110 CYS C C N N 111 CYS O O N N 112 CYS CB C N N 113 CYS SG S N N 114 CYS OXT O N N 115 CYS H H N N 116 CYS H2 H N N 117 CYS HA H N N 118 CYS HB2 H N N 119 CYS HB3 H N N 120 CYS HG H N N 121 CYS HXT H N N 122 GLN N N N N 123 GLN CA C N S 124 GLN C C N N 125 GLN O O N N 126 GLN CB C N N 127 GLN CG C N N 128 GLN CD C N N 129 GLN OE1 O N N 130 GLN NE2 N N N 131 GLN OXT O N N 132 GLN H H N N 133 GLN H2 H N N 134 GLN HA H N N 135 GLN HB2 H N N 136 GLN HB3 H N N 137 GLN HG2 H N N 138 GLN HG3 H N N 139 GLN HE21 H N N 140 GLN HE22 H N N 141 GLN HXT H N N 142 GLU N N N N 143 GLU CA C N S 144 GLU C C N N 145 GLU O O N N 146 GLU CB C N N 147 GLU CG C N N 148 GLU CD C N N 149 GLU OE1 O N N 150 GLU OE2 O N N 151 GLU OXT O N N 152 GLU H H N N 153 GLU H2 H N N 154 GLU HA H N N 155 GLU HB2 H N N 156 GLU HB3 H N N 157 GLU HG2 H N N 158 GLU HG3 H N N 159 GLU HE2 H N N 160 GLU HXT H N N 161 GLY N N N N 162 GLY CA C N N 163 GLY C C N N 164 GLY O O N N 165 GLY OXT O N N 166 GLY H H N N 167 GLY H2 H N N 168 GLY HA2 H N N 169 GLY HA3 H N N 170 GLY HXT H N N 171 HIS N N N N 172 HIS CA C N S 173 HIS C C N N 174 HIS O O N N 175 HIS CB C N N 176 HIS CG C Y N 177 HIS ND1 N Y N 178 HIS CD2 C Y N 179 HIS CE1 C Y N 180 HIS NE2 N Y N 181 HIS OXT O N N 182 HIS H H N N 183 HIS H2 H N N 184 HIS HA H N N 185 HIS HB2 H N N 186 HIS HB3 H N N 187 HIS HD1 H N N 188 HIS HD2 H N N 189 HIS HE1 H N N 190 HIS HE2 H N N 191 HIS HXT H N N 192 HOH O O N N 193 HOH H1 H N N 194 HOH H2 H N N 195 ILE N N N N 196 ILE CA C N S 197 ILE C C N N 198 ILE O O N N 199 ILE CB C N S 200 ILE CG1 C N N 201 ILE CG2 C N N 202 ILE CD1 C N N 203 ILE OXT O N N 204 ILE H H N N 205 ILE H2 H N N 206 ILE HA H N N 207 ILE HB H N N 208 ILE HG12 H N N 209 ILE HG13 H N N 210 ILE HG21 H N N 211 ILE HG22 H N N 212 ILE HG23 H N N 213 ILE HD11 H N N 214 ILE HD12 H N N 215 ILE HD13 H N N 216 ILE HXT H N N 217 LEU N N N N 218 LEU CA C N S 219 LEU C C N N 220 LEU O O N N 221 LEU CB C N N 222 LEU CG C N N 223 LEU CD1 C N N 224 LEU CD2 C N N 225 LEU OXT O N N 226 LEU H H N N 227 LEU H2 H N N 228 LEU HA H N N 229 LEU HB2 H N N 230 LEU HB3 H N N 231 LEU HG H N N 232 LEU HD11 H N N 233 LEU HD12 H N N 234 LEU HD13 H N N 235 LEU HD21 H N N 236 LEU HD22 H N N 237 LEU HD23 H N N 238 LEU HXT H N N 239 LYS N N N N 240 LYS CA C N S 241 LYS C C N N 242 LYS O O N N 243 LYS CB C N N 244 LYS CG C N N 245 LYS CD C N N 246 LYS CE C N N 247 LYS NZ N N N 248 LYS OXT O N N 249 LYS H H N N 250 LYS H2 H N N 251 LYS HA H N N 252 LYS HB2 H N N 253 LYS HB3 H N N 254 LYS HG2 H N N 255 LYS HG3 H N N 256 LYS HD2 H N N 257 LYS HD3 H N N 258 LYS HE2 H N N 259 LYS HE3 H N N 260 LYS HZ1 H N N 261 LYS HZ2 H N N 262 LYS HZ3 H N N 263 LYS HXT H N N 264 MET N N N N 265 MET CA C N S 266 MET C C N N 267 MET O O N N 268 MET CB C N N 269 MET CG C N N 270 MET SD S N N 271 MET CE C N N 272 MET OXT O N N 273 MET H H N N 274 MET H2 H N N 275 MET HA H N N 276 MET HB2 H N N 277 MET HB3 H N N 278 MET HG2 H N N 279 MET HG3 H N N 280 MET HE1 H N N 281 MET HE2 H N N 282 MET HE3 H N N 283 MET HXT H N N 284 PHE N N N N 285 PHE CA C N S 286 PHE C C N N 287 PHE O O N N 288 PHE CB C N N 289 PHE CG C Y N 290 PHE CD1 C Y N 291 PHE CD2 C Y N 292 PHE CE1 C Y N 293 PHE CE2 C Y N 294 PHE CZ C Y N 295 PHE OXT O N N 296 PHE H H N N 297 PHE H2 H N N 298 PHE HA H N N 299 PHE HB2 H N N 300 PHE HB3 H N N 301 PHE HD1 H N N 302 PHE HD2 H N N 303 PHE HE1 H N N 304 PHE HE2 H N N 305 PHE HZ H N N 306 PHE HXT H N N 307 PRO N N N N 308 PRO CA C N S 309 PRO C C N N 310 PRO O O N N 311 PRO CB C N N 312 PRO CG C N N 313 PRO CD C N N 314 PRO OXT O N N 315 PRO H H N N 316 PRO HA H N N 317 PRO HB2 H N N 318 PRO HB3 H N N 319 PRO HG2 H N N 320 PRO HG3 H N N 321 PRO HD2 H N N 322 PRO HD3 H N N 323 PRO HXT H N N 324 SER N N N N 325 SER CA C N S 326 SER C C N N 327 SER O O N N 328 SER CB C N N 329 SER OG O N N 330 SER OXT O N N 331 SER H H N N 332 SER H2 H N N 333 SER HA H N N 334 SER HB2 H N N 335 SER HB3 H N N 336 SER HG H N N 337 SER HXT H N N 338 THR N N N N 339 THR CA C N S 340 THR C C N N 341 THR O O N N 342 THR CB C N R 343 THR OG1 O N N 344 THR CG2 C N N 345 THR OXT O N N 346 THR H H N N 347 THR H2 H N N 348 THR HA H N N 349 THR HB H N N 350 THR HG1 H N N 351 THR HG21 H N N 352 THR HG22 H N N 353 THR HG23 H N N 354 THR HXT H N N 355 TRP N N N N 356 TRP CA C N S 357 TRP C C N N 358 TRP O O N N 359 TRP CB C N N 360 TRP CG C Y N 361 TRP CD1 C Y N 362 TRP CD2 C Y N 363 TRP NE1 N Y N 364 TRP CE2 C Y N 365 TRP CE3 C Y N 366 TRP CZ2 C Y N 367 TRP CZ3 C Y N 368 TRP CH2 C Y N 369 TRP OXT O N N 370 TRP H H N N 371 TRP H2 H N N 372 TRP HA H N N 373 TRP HB2 H N N 374 TRP HB3 H N N 375 TRP HD1 H N N 376 TRP HE1 H N N 377 TRP HE3 H N N 378 TRP HZ2 H N N 379 TRP HZ3 H N N 380 TRP HH2 H N N 381 TRP HXT H N N 382 TYR N N N N 383 TYR CA C N S 384 TYR C C N N 385 TYR O O N N 386 TYR CB C N N 387 TYR CG C Y N 388 TYR CD1 C Y N 389 TYR CD2 C Y N 390 TYR CE1 C Y N 391 TYR CE2 C Y N 392 TYR CZ C Y N 393 TYR OH O N N 394 TYR OXT O N N 395 TYR H H N N 396 TYR H2 H N N 397 TYR HA H N N 398 TYR HB2 H N N 399 TYR HB3 H N N 400 TYR HD1 H N N 401 TYR HD2 H N N 402 TYR HE1 H N N 403 TYR HE2 H N N 404 TYR HH H N N 405 TYR HXT H N N 406 VAL N N N N 407 VAL CA C N S 408 VAL C C N N 409 VAL O O N N 410 VAL CB C N N 411 VAL CG1 C N N 412 VAL CG2 C N N 413 VAL OXT O N N 414 VAL H H N N 415 VAL H2 H N N 416 VAL HA H N N 417 VAL HB H N N 418 VAL HG11 H N N 419 VAL HG12 H N N 420 VAL HG13 H N N 421 VAL HG21 H N N 422 VAL HG22 H N N 423 VAL HG23 H N N 424 VAL HXT H N N 425 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 C5P O3P P sing N N 70 C5P O3P HOP3 sing N N 71 C5P P O1P doub N N 72 C5P P O2P sing N N 73 C5P P "O5'" sing N N 74 C5P O2P HOP2 sing N N 75 C5P "O5'" "C5'" sing N N 76 C5P "C5'" "C4'" sing N N 77 C5P "C5'" "H5'1" sing N N 78 C5P "C5'" "H5'2" sing N N 79 C5P "C4'" "O4'" sing N N 80 C5P "C4'" "C3'" sing N N 81 C5P "C4'" "H4'" sing N N 82 C5P "O4'" "C1'" sing N N 83 C5P "C3'" "O3'" sing N N 84 C5P "C3'" "C2'" sing N N 85 C5P "C3'" "H3'" sing N N 86 C5P "O3'" "HO3'" sing N N 87 C5P "C2'" "O2'" sing N N 88 C5P "C2'" "C1'" sing N N 89 C5P "C2'" "H2'1" sing N N 90 C5P "O2'" "HO2'" sing N N 91 C5P "C1'" N1 sing N N 92 C5P "C1'" "H1'" sing N N 93 C5P N1 C2 sing N N 94 C5P N1 C6 sing N N 95 C5P C2 N3 sing N N 96 C5P C2 O2 doub N N 97 C5P N3 C4 doub N N 98 C5P C4 C5 sing N N 99 C5P C4 N4 sing N N 100 C5P C5 C6 doub N N 101 C5P C5 H5 sing N N 102 C5P C6 H6 sing N N 103 C5P N4 HN41 sing N N 104 C5P N4 HN42 sing N N 105 CYS N CA sing N N 106 CYS N H sing N N 107 CYS N H2 sing N N 108 CYS CA C sing N N 109 CYS CA CB sing N N 110 CYS CA HA sing N N 111 CYS C O doub N N 112 CYS C OXT sing N N 113 CYS CB SG sing N N 114 CYS CB HB2 sing N N 115 CYS CB HB3 sing N N 116 CYS SG HG sing N N 117 CYS OXT HXT sing N N 118 GLN N CA sing N N 119 GLN N H sing N N 120 GLN N H2 sing N N 121 GLN CA C sing N N 122 GLN CA CB sing N N 123 GLN CA HA sing N N 124 GLN C O doub N N 125 GLN C OXT sing N N 126 GLN CB CG sing N N 127 GLN CB HB2 sing N N 128 GLN CB HB3 sing N N 129 GLN CG CD sing N N 130 GLN CG HG2 sing N N 131 GLN CG HG3 sing N N 132 GLN CD OE1 doub N N 133 GLN CD NE2 sing N N 134 GLN NE2 HE21 sing N N 135 GLN NE2 HE22 sing N N 136 GLN OXT HXT sing N N 137 GLU N CA sing N N 138 GLU N H sing N N 139 GLU N H2 sing N N 140 GLU CA C sing N N 141 GLU CA CB sing N N 142 GLU CA HA sing N N 143 GLU C O doub N N 144 GLU C OXT sing N N 145 GLU CB CG sing N N 146 GLU CB HB2 sing N N 147 GLU CB HB3 sing N N 148 GLU CG CD sing N N 149 GLU CG HG2 sing N N 150 GLU CG HG3 sing N N 151 GLU CD OE1 doub N N 152 GLU CD OE2 sing N N 153 GLU OE2 HE2 sing N N 154 GLU OXT HXT sing N N 155 GLY N CA sing N N 156 GLY N H sing N N 157 GLY N H2 sing N N 158 GLY CA C sing N N 159 GLY CA HA2 sing N N 160 GLY CA HA3 sing N N 161 GLY C O doub N N 162 GLY C OXT sing N N 163 GLY OXT HXT sing N N 164 HIS N CA sing N N 165 HIS N H sing N N 166 HIS N H2 sing N N 167 HIS CA C sing N N 168 HIS CA CB sing N N 169 HIS CA HA sing N N 170 HIS C O doub N N 171 HIS C OXT sing N N 172 HIS CB CG sing N N 173 HIS CB HB2 sing N N 174 HIS CB HB3 sing N N 175 HIS CG ND1 sing Y N 176 HIS CG CD2 doub Y N 177 HIS ND1 CE1 doub Y N 178 HIS ND1 HD1 sing N N 179 HIS CD2 NE2 sing Y N 180 HIS CD2 HD2 sing N N 181 HIS CE1 NE2 sing Y N 182 HIS CE1 HE1 sing N N 183 HIS NE2 HE2 sing N N 184 HIS OXT HXT sing N N 185 HOH O H1 sing N N 186 HOH O H2 sing N N 187 ILE N CA sing N N 188 ILE N H sing N N 189 ILE N H2 sing N N 190 ILE CA C sing N N 191 ILE CA CB sing N N 192 ILE CA HA sing N N 193 ILE C O doub N N 194 ILE C OXT sing N N 195 ILE CB CG1 sing N N 196 ILE CB CG2 sing N N 197 ILE CB HB sing N N 198 ILE CG1 CD1 sing N N 199 ILE CG1 HG12 sing N N 200 ILE CG1 HG13 sing N N 201 ILE CG2 HG21 sing N N 202 ILE CG2 HG22 sing N N 203 ILE CG2 HG23 sing N N 204 ILE CD1 HD11 sing N N 205 ILE CD1 HD12 sing N N 206 ILE CD1 HD13 sing N N 207 ILE OXT HXT sing N N 208 LEU N CA sing N N 209 LEU N H sing N N 210 LEU N H2 sing N N 211 LEU CA C sing N N 212 LEU CA CB sing N N 213 LEU CA HA sing N N 214 LEU C O doub N N 215 LEU C OXT sing N N 216 LEU CB CG sing N N 217 LEU CB HB2 sing N N 218 LEU CB HB3 sing N N 219 LEU CG CD1 sing N N 220 LEU CG CD2 sing N N 221 LEU CG HG sing N N 222 LEU CD1 HD11 sing N N 223 LEU CD1 HD12 sing N N 224 LEU CD1 HD13 sing N N 225 LEU CD2 HD21 sing N N 226 LEU CD2 HD22 sing N N 227 LEU CD2 HD23 sing N N 228 LEU OXT HXT sing N N 229 LYS N CA sing N N 230 LYS N H sing N N 231 LYS N H2 sing N N 232 LYS CA C sing N N 233 LYS CA CB sing N N 234 LYS CA HA sing N N 235 LYS C O doub N N 236 LYS C OXT sing N N 237 LYS CB CG sing N N 238 LYS CB HB2 sing N N 239 LYS CB HB3 sing N N 240 LYS CG CD sing N N 241 LYS CG HG2 sing N N 242 LYS CG HG3 sing N N 243 LYS CD CE sing N N 244 LYS CD HD2 sing N N 245 LYS CD HD3 sing N N 246 LYS CE NZ sing N N 247 LYS CE HE2 sing N N 248 LYS CE HE3 sing N N 249 LYS NZ HZ1 sing N N 250 LYS NZ HZ2 sing N N 251 LYS NZ HZ3 sing N N 252 LYS OXT HXT sing N N 253 MET N CA sing N N 254 MET N H sing N N 255 MET N H2 sing N N 256 MET CA C sing N N 257 MET CA CB sing N N 258 MET CA HA sing N N 259 MET C O doub N N 260 MET C OXT sing N N 261 MET CB CG sing N N 262 MET CB HB2 sing N N 263 MET CB HB3 sing N N 264 MET CG SD sing N N 265 MET CG HG2 sing N N 266 MET CG HG3 sing N N 267 MET SD CE sing N N 268 MET CE HE1 sing N N 269 MET CE HE2 sing N N 270 MET CE HE3 sing N N 271 MET OXT HXT sing N N 272 PHE N CA sing N N 273 PHE N H sing N N 274 PHE N H2 sing N N 275 PHE CA C sing N N 276 PHE CA CB sing N N 277 PHE CA HA sing N N 278 PHE C O doub N N 279 PHE C OXT sing N N 280 PHE CB CG sing N N 281 PHE CB HB2 sing N N 282 PHE CB HB3 sing N N 283 PHE CG CD1 doub Y N 284 PHE CG CD2 sing Y N 285 PHE CD1 CE1 sing Y N 286 PHE CD1 HD1 sing N N 287 PHE CD2 CE2 doub Y N 288 PHE CD2 HD2 sing N N 289 PHE CE1 CZ doub Y N 290 PHE CE1 HE1 sing N N 291 PHE CE2 CZ sing Y N 292 PHE CE2 HE2 sing N N 293 PHE CZ HZ sing N N 294 PHE OXT HXT sing N N 295 PRO N CA sing N N 296 PRO N CD sing N N 297 PRO N H sing N N 298 PRO CA C sing N N 299 PRO CA CB sing N N 300 PRO CA HA sing N N 301 PRO C O doub N N 302 PRO C OXT sing N N 303 PRO CB CG sing N N 304 PRO CB HB2 sing N N 305 PRO CB HB3 sing N N 306 PRO CG CD sing N N 307 PRO CG HG2 sing N N 308 PRO CG HG3 sing N N 309 PRO CD HD2 sing N N 310 PRO CD HD3 sing N N 311 PRO OXT HXT sing N N 312 SER N CA sing N N 313 SER N H sing N N 314 SER N H2 sing N N 315 SER CA C sing N N 316 SER CA CB sing N N 317 SER CA HA sing N N 318 SER C O doub N N 319 SER C OXT sing N N 320 SER CB OG sing N N 321 SER CB HB2 sing N N 322 SER CB HB3 sing N N 323 SER OG HG sing N N 324 SER OXT HXT sing N N 325 THR N CA sing N N 326 THR N H sing N N 327 THR N H2 sing N N 328 THR CA C sing N N 329 THR CA CB sing N N 330 THR CA HA sing N N 331 THR C O doub N N 332 THR C OXT sing N N 333 THR CB OG1 sing N N 334 THR CB CG2 sing N N 335 THR CB HB sing N N 336 THR OG1 HG1 sing N N 337 THR CG2 HG21 sing N N 338 THR CG2 HG22 sing N N 339 THR CG2 HG23 sing N N 340 THR OXT HXT sing N N 341 TRP N CA sing N N 342 TRP N H sing N N 343 TRP N H2 sing N N 344 TRP CA C sing N N 345 TRP CA CB sing N N 346 TRP CA HA sing N N 347 TRP C O doub N N 348 TRP C OXT sing N N 349 TRP CB CG sing N N 350 TRP CB HB2 sing N N 351 TRP CB HB3 sing N N 352 TRP CG CD1 doub Y N 353 TRP CG CD2 sing Y N 354 TRP CD1 NE1 sing Y N 355 TRP CD1 HD1 sing N N 356 TRP CD2 CE2 doub Y N 357 TRP CD2 CE3 sing Y N 358 TRP NE1 CE2 sing Y N 359 TRP NE1 HE1 sing N N 360 TRP CE2 CZ2 sing Y N 361 TRP CE3 CZ3 doub Y N 362 TRP CE3 HE3 sing N N 363 TRP CZ2 CH2 doub Y N 364 TRP CZ2 HZ2 sing N N 365 TRP CZ3 CH2 sing Y N 366 TRP CZ3 HZ3 sing N N 367 TRP CH2 HH2 sing N N 368 TRP OXT HXT sing N N 369 TYR N CA sing N N 370 TYR N H sing N N 371 TYR N H2 sing N N 372 TYR CA C sing N N 373 TYR CA CB sing N N 374 TYR CA HA sing N N 375 TYR C O doub N N 376 TYR C OXT sing N N 377 TYR CB CG sing N N 378 TYR CB HB2 sing N N 379 TYR CB HB3 sing N N 380 TYR CG CD1 doub Y N 381 TYR CG CD2 sing Y N 382 TYR CD1 CE1 sing Y N 383 TYR CD1 HD1 sing N N 384 TYR CD2 CE2 doub Y N 385 TYR CD2 HD2 sing N N 386 TYR CE1 CZ doub Y N 387 TYR CE1 HE1 sing N N 388 TYR CE2 CZ sing Y N 389 TYR CE2 HE2 sing N N 390 TYR CZ OH sing N N 391 TYR OH HH sing N N 392 TYR OXT HXT sing N N 393 VAL N CA sing N N 394 VAL N H sing N N 395 VAL N H2 sing N N 396 VAL CA C sing N N 397 VAL CA CB sing N N 398 VAL CA HA sing N N 399 VAL C O doub N N 400 VAL C OXT sing N N 401 VAL CB CG1 sing N N 402 VAL CB CG2 sing N N 403 VAL CB HB sing N N 404 VAL CG1 HG11 sing N N 405 VAL CG1 HG12 sing N N 406 VAL CG1 HG13 sing N N 407 VAL CG2 HG21 sing N N 408 VAL CG2 HG22 sing N N 409 VAL CG2 HG23 sing N N 410 VAL OXT HXT sing N N 411 # _pdbx_initial_refinement_model.accession_code ? _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type other _pdbx_initial_refinement_model.source_name ? _pdbx_initial_refinement_model.details 'APO STRUCTURE' # _atom_sites.entry_id 2VFL _atom_sites.fract_transf_matrix[1][1] 0.023273 _atom_sites.fract_transf_matrix[1][2] 0.013437 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.026873 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.010207 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O P S # loop_