data_2VKG # _entry.id 2VKG # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.382 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2VKG pdb_00002vkg 10.2210/pdb2vkg/pdb PDBE EBI-34828 ? ? WWPDB D_1290034828 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.content_type _pdbx_database_related.details PDB 2CCB unspecified 'COMPLEXES OF DODECIN WITH FLAVIN AND FLAVIN -LIKE LIGANDS' PDB 2CCC unspecified 'COMPLEXES OF DODECIN WITH FLAVIN AND FLAVIN -LIKE LIGANDS' PDB 2CIF unspecified 'COMPLEXES OF DODECIN WITH FLAVIN AND FLAVIN -LIKE LIGANDS' PDB 1MOG unspecified 'CRYSTAL STRUCTURE OF H. SALINARUM DODECIN' PDB 2CC6 unspecified 'COMPLEXES OF DODECIN WITH FLAVIN AND FLAVIN -LIKE LIGANDS' PDB 2CC7 unspecified 'COMPLEXES OF DODECIN WITH FLAVIN AND FLAVIN -LIKE LIGANDS' PDB 2CC8 unspecified 'COMPLEXES OF DODECIN WITH FLAVIN AND FLAVIN -LIKE LIGANDS' PDB 2CC9 unspecified 'COMPLEXES OF DODECIN WITH FLAVIN AND FLAVIN -LIKE LIGANDS' PDB 2CIE unspecified 'COMPLEXES OF DODECIN WITH FLAVIN AND FLAVIN -LIKE LIGANDS' PDB 2CJC unspecified 'COMPLEXES OF DODECIN WITH FLAVIN AND FLAVIN -LIKE LIGANDS' PDB 2VKF unspecified 'COMPLEXES OF DODECIN WITH FLAVIN AND FLAVIN -LIKE LIGANDS' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 2VKG _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.SG_entry . _pdbx_database_status.recvd_initial_deposition_date 2007-12-19 _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Grininger, M.' 1 'Noell, G.' 2 'Trawoeger, S.' 3 'Sinner, E.' 4 'Oesterhelt, D.' 5 # _citation.id primary _citation.title 'Electrochemical Switching of the Flavoprotein Dodecin at Gold Surfaces Modified by Flavin-DNA Hybrid Linkers' _citation.journal_abbrev Biointerphases _citation.journal_volume 3 _citation.page_first 51 _citation.page_last ? _citation.year 2008 _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN 1934-8630 _citation.journal_id_CSD ? _citation.book_publisher ? _citation.pdbx_database_id_PubMed 20408700 _citation.pdbx_database_id_DOI 10.1116/1.2965134 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Grininger, M.' 1 ? primary 'Noell, G.' 2 ? primary 'Trawoeger, S.' 3 ? primary 'Sinner, E.' 4 ? primary 'Oesterhelt, D.' 5 ? # _cell.entry_id 2VKG _cell.length_a 142.030 _cell.length_b 142.030 _cell.length_c 142.030 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 96 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2VKG _symmetry.space_group_name_H-M 'F 41 3 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 210 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man DODECIN 6722.342 1 ? YES 'RESIDUES 11-58,61-74' 'LIGAND BOUND' 2 non-polymer syn 'MAGNESIUM ION' 24.305 2 ? ? ? ? 3 non-polymer syn 'SODIUM ION' 22.990 1 ? ? ? ? 4 non-polymer syn '[4-(7,8-dimethyl-2,4-dioxo-3,4-dihydrobenzo[g]pteridin-10(2H)-yl)butyl]carbamic acid' 357.364 1 ? ? ? ? 5 non-polymer syn 'CHLORIDE ION' 35.453 1 ? ? ? ? 6 non-polymer syn 'SULFATE ION' 96.063 1 ? ? ? ? 7 water nat water 18.015 86 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code VFKKVLLTGTSEESFTAAADDAIDRAEDTLDNVVWAEVVDQGVAIGAVRTYQTEVQVAFELD _entity_poly.pdbx_seq_one_letter_code_can VFKKVLLTGTSEESFTAAADDAIDRAEDTLDNVVWAEVVDQGVAIGAVRTYQTEVQVAFELD _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 VAL n 1 2 PHE n 1 3 LYS n 1 4 LYS n 1 5 VAL n 1 6 LEU n 1 7 LEU n 1 8 THR n 1 9 GLY n 1 10 THR n 1 11 SER n 1 12 GLU n 1 13 GLU n 1 14 SER n 1 15 PHE n 1 16 THR n 1 17 ALA n 1 18 ALA n 1 19 ALA n 1 20 ASP n 1 21 ASP n 1 22 ALA n 1 23 ILE n 1 24 ASP n 1 25 ARG n 1 26 ALA n 1 27 GLU n 1 28 ASP n 1 29 THR n 1 30 LEU n 1 31 ASP n 1 32 ASN n 1 33 VAL n 1 34 VAL n 1 35 TRP n 1 36 ALA n 1 37 GLU n 1 38 VAL n 1 39 VAL n 1 40 ASP n 1 41 GLN n 1 42 GLY n 1 43 VAL n 1 44 ALA n 1 45 ILE n 1 46 GLY n 1 47 ALA n 1 48 VAL n 1 49 ARG n 1 50 THR n 1 51 TYR n 1 52 GLN n 1 53 THR n 1 54 GLU n 1 55 VAL n 1 56 GLN n 1 57 VAL n 1 58 ALA n 1 59 PHE n 1 60 GLU n 1 61 LEU n 1 62 ASP n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain R1 _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'HALOBACTERIUM SALINARUM' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 478009 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'ESCHERICHIA COLI' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type PLASMID _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name PET22B _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description 'GERMAN COLLECTION OF MICROORGANISMS (DSM 671)' # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q9HPW4_HALSA _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin ? _struct_ref.pdbx_db_accession Q9HPW4 _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 2VKG A 1 ? 48 ? Q9HPW4 11 ? 58 ? 2 49 2 1 2VKG A 49 ? 62 ? Q9HPW4 61 ? 74 ? 50 63 # _struct_ref_seq_dif.align_id 1 _struct_ref_seq_dif.pdbx_pdb_id_code 2VKG _struct_ref_seq_dif.mon_id ALA _struct_ref_seq_dif.pdbx_pdb_strand_id A _struct_ref_seq_dif.seq_num 44 _struct_ref_seq_dif.pdbx_pdb_ins_code ? _struct_ref_seq_dif.pdbx_seq_db_name UNP _struct_ref_seq_dif.pdbx_seq_db_accession_code Q9HPW4 _struct_ref_seq_dif.db_mon_id GLU _struct_ref_seq_dif.pdbx_seq_db_seq_num 54 _struct_ref_seq_dif.details 'engineered mutation' _struct_ref_seq_dif.pdbx_auth_seq_num 45 _struct_ref_seq_dif.pdbx_ordinal 1 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CF4 non-polymer . '[4-(7,8-dimethyl-2,4-dioxo-3,4-dihydrobenzo[g]pteridin-10(2H)-yl)butyl]carbamic acid' ? 'C17 H19 N5 O4' 357.364 CL non-polymer . 'CHLORIDE ION' ? 'Cl -1' 35.453 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MG non-polymer . 'MAGNESIUM ION' ? 'Mg 2' 24.305 NA non-polymer . 'SODIUM ION' ? 'Na 1' 22.990 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 SO4 non-polymer . 'SULFATE ION' ? 'O4 S -2' 96.063 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 2VKG _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 3.52 _exptl_crystal.density_percent_sol 64.82 _exptl_crystal.description NONE # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method ? _exptl_crystal_grow.temp ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.5 _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details '0.2 M MGCL2, 2 M NACL, 0.1 M HEPES, 30% PEG400, PH7.5' # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type MARRESEARCH _diffrn_detector.pdbx_collection_date 2006-04-20 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.976000 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'ESRF BEAMLINE BM14' _diffrn_source.pdbx_synchrotron_site ESRF _diffrn_source.pdbx_synchrotron_beamline BM14 _diffrn_source.pdbx_wavelength 0.976000 _diffrn_source.pdbx_wavelength_list ? # _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.entry_id 2VKG _reflns.observed_criterion_sigma_I 3.0 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 20.00 _reflns.d_resolution_high 1.80 _reflns.number_obs 107589 _reflns.number_all ? _reflns.percent_possible_obs 97.1 _reflns.pdbx_Rmerge_I_obs 0.10 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 19.20 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 9.2 # _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_ordinal 1 _reflns_shell.d_res_high 1.80 _reflns_shell.d_res_low 1.90 _reflns_shell.percent_possible_all 96.7 _reflns_shell.Rmerge_I_obs 0.58 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 3.40 _reflns_shell.pdbx_redundancy 9.2 # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 2VKG _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 11077 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 19.75 _refine.ls_d_res_high 1.80 _refine.ls_percent_reflns_obs 98.3 _refine.ls_R_factor_obs 0.193 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.192 _refine.ls_R_factor_R_free 0.213 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.200 _refine.ls_number_reflns_R_free 602 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.950 _refine.correlation_coeff_Fo_to_Fc_free 0.948 _refine.B_iso_mean 19.36 _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.40 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ;HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS. CRYSTALS WERE SOAKED WITH A FLAVIN-DNA HYBRID LIGAND. JUST THE ISOALLOXAZINE PART AS WELL AS THE ALIPHATIC PART IS VISIBLE IN DENSITY. BASES ARE NOT INCLUDED IN THE MODEL FOR THE LIGAND, BUT CAUSE SOME NOT EXPLAINED DENSITY IN BINDING POCKET. ; _refine.pdbx_starting_model 'PDB ENTRY 2CCC' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.093 _refine.pdbx_overall_ESU_R_Free 0.092 _refine.overall_SU_ML ? _refine.pdbx_overall_phase_error ? _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 473 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 35 _refine_hist.number_atoms_solvent 86 _refine_hist.number_atoms_total 594 _refine_hist.d_res_high 1.80 _refine_hist.d_res_low 19.75 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.890 0.022 ? 524 'X-RAY DIFFRACTION' ? r_bond_other_d ? ? ? ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.547 2.001 ? 720 'X-RAY DIFFRACTION' ? r_angle_other_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 7.112 5.000 ? 65 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 30.078 26.250 ? 24 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 11.069 15.000 ? 77 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 9.859 15.000 ? 2 'X-RAY DIFFRACTION' ? r_chiral_restr 0.112 0.200 ? 85 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.007 0.020 ? 397 'X-RAY DIFFRACTION' ? r_gen_planes_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_refined 0.212 0.200 ? 171 'X-RAY DIFFRACTION' ? r_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_refined 0.311 0.200 ? 354 'X-RAY DIFFRACTION' ? r_nbtor_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 0.243 0.200 ? 55 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 0.192 0.200 ? 52 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 0.208 0.200 ? 24 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 0.878 1.500 ? 315 'X-RAY DIFFRACTION' ? r_mcbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcangle_it 1.655 2.000 ? 512 'X-RAY DIFFRACTION' ? r_mcangle_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_scbond_it 2.695 3.000 ? 209 'X-RAY DIFFRACTION' ? r_scbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_scangle_it 3.950 4.500 ? 207 'X-RAY DIFFRACTION' ? r_scangle_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_long_range_B_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_long_range_B_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 1.80 _refine_ls_shell.d_res_low 1.85 _refine_ls_shell.number_reflns_R_work 796 _refine_ls_shell.R_factor_R_work 0.2690 _refine_ls_shell.percent_reflns_obs ? _refine_ls_shell.R_factor_R_free 0.3480 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 39 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? # _struct.entry_id 2VKG _struct.title 'COMPLEXES OF DODECIN WITH FLAVIN AND FLAVIN-LIKE LIGANDS' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2VKG _struct_keywords.pdbx_keywords 'ELECTRON TRANSPORT' _struct_keywords.text 'BIOTECHNOLOGICAL APPLICATION OF DODECIN BINDING PROPERTIES, FLAVIN-DNA LIGAND HYBRID, ELECTRON TRANSPORT' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 2 ? D N N 3 ? E N N 4 ? F N N 5 ? G N N 6 ? H N N 7 ? # _struct_biol.id 1 # _struct_conf.conf_type_id HELX_P _struct_conf.id HELX_P1 _struct_conf.pdbx_PDB_helix_id 1 _struct_conf.beg_label_comp_id SER _struct_conf.beg_label_asym_id A _struct_conf.beg_label_seq_id 14 _struct_conf.pdbx_beg_PDB_ins_code ? _struct_conf.end_label_comp_id LEU _struct_conf.end_label_asym_id A _struct_conf.end_label_seq_id 30 _struct_conf.pdbx_end_PDB_ins_code ? _struct_conf.beg_auth_comp_id SER _struct_conf.beg_auth_asym_id A _struct_conf.beg_auth_seq_id 15 _struct_conf.end_auth_comp_id LEU _struct_conf.end_auth_asym_id A _struct_conf.end_auth_seq_id 31 _struct_conf.pdbx_PDB_helix_class 1 _struct_conf.details ? _struct_conf.pdbx_PDB_helix_length 17 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? A GLU 13 OE2 ? ? ? 1_555 C MG . MG ? ? A GLU 14 A MG 1062 1_555 ? ? ? ? ? ? ? 2.117 ? ? metalc2 metalc ? ? A ASP 40 OD2 ? ? ? 80_555 B MG . MG ? ? A ASP 41 A MG 1061 1_555 ? ? ? ? ? ? ? 2.345 ? ? metalc3 metalc ? ? B MG . MG ? ? ? 1_555 H HOH . O ? ? A MG 1061 A HOH 2053 1_555 ? ? ? ? ? ? ? 2.343 ? ? metalc4 metalc ? ? B MG . MG ? ? ? 1_555 H HOH . O ? ? A MG 1061 A HOH 2055 1_555 ? ? ? ? ? ? ? 2.294 ? ? metalc5 metalc ? ? B MG . MG ? ? ? 1_555 H HOH . O ? ? A MG 1061 A HOH 2059 80_555 ? ? ? ? ? ? ? 2.258 ? ? metalc6 metalc ? ? B MG . MG ? ? ? 1_555 H HOH . O ? ? A MG 1061 A HOH 2078 80_555 ? ? ? ? ? ? ? 1.982 ? ? metalc7 metalc ? ? C MG . MG ? ? ? 1_555 H HOH . O ? ? A MG 1062 A HOH 2022 1_555 ? ? ? ? ? ? ? 2.461 ? ? metalc8 metalc ? ? C MG . MG ? ? ? 1_555 H HOH . O ? ? A MG 1062 A HOH 2023 1_555 ? ? ? ? ? ? ? 2.149 ? ? metalc9 metalc ? ? C MG . MG ? ? ? 1_555 H HOH . O ? ? A MG 1062 A HOH 2025 1_555 ? ? ? ? ? ? ? 2.145 ? ? metalc10 metalc ? ? C MG . MG ? ? ? 1_555 H HOH . O ? ? A MG 1062 A HOH 2030 24_555 ? ? ? ? ? ? ? 1.994 ? ? metalc11 metalc ? ? C MG . MG ? ? ? 1_555 H HOH . O ? ? A MG 1062 A HOH 2038 24_555 ? ? ? ? ? ? ? 2.155 ? ? metalc12 metalc ? ? D NA . NA ? ? ? 1_555 H HOH . O ? ? A NA 1063 A HOH 2011 80_555 ? ? ? ? ? ? ? 2.574 ? ? metalc13 metalc ? ? D NA . NA ? ? ? 1_555 H HOH . O ? ? A NA 1063 A HOH 2011 59_555 ? ? ? ? ? ? ? 2.574 ? ? metalc14 metalc ? ? D NA . NA ? ? ? 1_555 H HOH . O ? ? A NA 1063 A HOH 2011 1_555 ? ? ? ? ? ? ? 2.574 ? ? metalc15 metalc ? ? D NA . NA ? ? ? 1_555 H HOH . O ? ? A NA 1063 A HOH 2081 1_555 ? ? ? ? ? ? ? 2.336 ? ? metalc16 metalc ? ? D NA . NA ? ? ? 1_555 H HOH . O ? ? A NA 1063 A HOH 2081 80_555 ? ? ? ? ? ? ? 2.336 ? ? metalc17 metalc ? ? D NA . NA ? ? ? 1_555 H HOH . O ? ? A NA 1063 A HOH 2081 59_555 ? ? ? ? ? ? ? 2.336 ? ? # _struct_conn_type.id metalc _struct_conn_type.criteria ? _struct_conn_type.reference ? # _struct_sheet.id AA _struct_sheet.type ? _struct_sheet.number_strands 3 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA 1 2 ? anti-parallel AA 2 3 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA 1 PHE A 2 ? SER A 11 ? PHE A 3 SER A 12 AA 2 ARG A 49 ? GLU A 60 ? ARG A 50 GLU A 61 AA 3 VAL A 33 ? ILE A 45 ? VAL A 34 ILE A 46 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA 1 2 N SER A 11 ? N SER A 12 O TYR A 51 ? O TYR A 52 AA 2 3 O ALA A 58 ? O ALA A 59 N VAL A 34 ? N VAL A 35 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A MG 1061 ? 5 'BINDING SITE FOR RESIDUE MG A 1061' AC2 Software A MG 1062 ? 6 'BINDING SITE FOR RESIDUE MG A 1062' AC3 Software A NA 1063 ? 9 'BINDING SITE FOR RESIDUE NA A 1063' AC4 Software A CL 1066 ? 9 'BINDING SITE FOR RESIDUE CL A 1066' AC5 Software A SO4 1068 ? 7 'BINDING SITE FOR RESIDUE SO4 A 1068' AC6 Software A CF4 1064 ? 7 'BINDING SITE FOR RESIDUE CF4 A 1064' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 5 ASP A 40 ? ASP A 41 . ? 80_555 ? 2 AC1 5 HOH H . ? HOH A 2053 . ? 1_555 ? 3 AC1 5 HOH H . ? HOH A 2055 . ? 1_555 ? 4 AC1 5 HOH H . ? HOH A 2059 . ? 80_555 ? 5 AC1 5 HOH H . ? HOH A 2078 . ? 80_555 ? 6 AC2 6 GLU A 13 ? GLU A 14 . ? 1_555 ? 7 AC2 6 HOH H . ? HOH A 2022 . ? 1_555 ? 8 AC2 6 HOH H . ? HOH A 2023 . ? 1_555 ? 9 AC2 6 HOH H . ? HOH A 2025 . ? 1_555 ? 10 AC2 6 HOH H . ? HOH A 2030 . ? 24_555 ? 11 AC2 6 HOH H . ? HOH A 2038 . ? 24_555 ? 12 AC3 9 CL F . ? CL A 1066 . ? 1_555 ? 13 AC3 9 CL F . ? CL A 1066 . ? 59_555 ? 14 AC3 9 CL F . ? CL A 1066 . ? 80_555 ? 15 AC3 9 HOH H . ? HOH A 2011 . ? 80_555 ? 16 AC3 9 HOH H . ? HOH A 2011 . ? 59_555 ? 17 AC3 9 HOH H . ? HOH A 2011 . ? 1_555 ? 18 AC3 9 HOH H . ? HOH A 2081 . ? 80_555 ? 19 AC3 9 HOH H . ? HOH A 2081 . ? 1_555 ? 20 AC3 9 HOH H . ? HOH A 2081 . ? 59_555 ? 21 AC4 9 GLN A 56 ? GLN A 57 . ? 80_555 ? 22 AC4 9 GLN A 56 ? GLN A 57 . ? 1_555 ? 23 AC4 9 GLN A 56 ? GLN A 57 . ? 59_555 ? 24 AC4 9 NA D . ? NA A 1063 . ? 59_555 ? 25 AC4 9 NA D . ? NA A 1063 . ? 80_555 ? 26 AC4 9 NA D . ? NA A 1063 . ? 1_555 ? 27 AC4 9 HOH H . ? HOH A 2036 . ? 80_555 ? 28 AC4 9 HOH H . ? HOH A 2036 . ? 59_555 ? 29 AC4 9 HOH H . ? HOH A 2036 . ? 1_555 ? 30 AC5 7 SER A 14 ? SER A 15 . ? 1_555 ? 31 AC5 7 SER A 14 ? SER A 15 . ? 5_555 ? 32 AC5 7 SER A 14 ? SER A 15 . ? 9_555 ? 33 AC5 7 PHE A 15 ? PHE A 16 . ? 9_555 ? 34 AC5 7 THR A 16 ? THR A 17 . ? 9_555 ? 35 AC5 7 THR A 16 ? THR A 17 . ? 5_555 ? 36 AC5 7 THR A 16 ? THR A 17 . ? 1_555 ? 37 AC6 7 VAL A 34 ? VAL A 35 . ? 1_555 ? 38 AC6 7 TRP A 35 ? TRP A 36 . ? 1_555 ? 39 AC6 7 VAL A 43 ? VAL A 44 . ? 5_555 ? 40 AC6 7 ALA A 44 ? ALA A 45 . ? 5_555 ? 41 AC6 7 GLN A 52 ? GLN A 53 . ? 5_555 ? 42 AC6 7 GLN A 52 ? GLN A 53 . ? 80_555 ? 43 AC6 7 HOH H . ? HOH A 2077 . ? 80_555 ? # _database_PDB_matrix.entry_id 2VKG _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 2VKG _atom_sites.fract_transf_matrix[1][1] 0.007041 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.007041 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.007041 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C CL MG N NA O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 VAL 1 2 2 VAL VAL A . n A 1 2 PHE 2 3 3 PHE PHE A . n A 1 3 LYS 3 4 4 LYS LYS A . n A 1 4 LYS 4 5 5 LYS LYS A . n A 1 5 VAL 5 6 6 VAL VAL A . n A 1 6 LEU 6 7 7 LEU LEU A . n A 1 7 LEU 7 8 8 LEU LEU A . n A 1 8 THR 8 9 9 THR THR A . n A 1 9 GLY 9 10 10 GLY GLY A . n A 1 10 THR 10 11 11 THR THR A . n A 1 11 SER 11 12 12 SER SER A . n A 1 12 GLU 12 13 13 GLU GLU A . n A 1 13 GLU 13 14 14 GLU GLU A . n A 1 14 SER 14 15 15 SER SER A . n A 1 15 PHE 15 16 16 PHE PHE A . n A 1 16 THR 16 17 17 THR THR A . n A 1 17 ALA 17 18 18 ALA ALA A . n A 1 18 ALA 18 19 19 ALA ALA A . n A 1 19 ALA 19 20 20 ALA ALA A . n A 1 20 ASP 20 21 21 ASP ASP A . n A 1 21 ASP 21 22 22 ASP ASP A . n A 1 22 ALA 22 23 23 ALA ALA A . n A 1 23 ILE 23 24 24 ILE ILE A . n A 1 24 ASP 24 25 25 ASP ASP A . n A 1 25 ARG 25 26 26 ARG ARG A . n A 1 26 ALA 26 27 27 ALA ALA A . n A 1 27 GLU 27 28 28 GLU GLU A . n A 1 28 ASP 28 29 29 ASP ASP A . n A 1 29 THR 29 30 30 THR THR A . n A 1 30 LEU 30 31 31 LEU LEU A . n A 1 31 ASP 31 32 32 ASP ASP A . n A 1 32 ASN 32 33 33 ASN ASN A . n A 1 33 VAL 33 34 34 VAL VAL A . n A 1 34 VAL 34 35 35 VAL VAL A . n A 1 35 TRP 35 36 36 TRP TRP A . n A 1 36 ALA 36 37 37 ALA ALA A . n A 1 37 GLU 37 38 38 GLU GLU A . n A 1 38 VAL 38 39 39 VAL VAL A . n A 1 39 VAL 39 40 40 VAL VAL A . n A 1 40 ASP 40 41 41 ASP ASP A . n A 1 41 GLN 41 42 42 GLN GLN A . n A 1 42 GLY 42 43 43 GLY GLY A . n A 1 43 VAL 43 44 44 VAL VAL A . n A 1 44 ALA 44 45 45 ALA ALA A . n A 1 45 ILE 45 46 46 ILE ILE A . n A 1 46 GLY 46 47 47 GLY GLY A . n A 1 47 ALA 47 48 48 ALA ALA A . n A 1 48 VAL 48 49 49 VAL VAL A . n A 1 49 ARG 49 50 50 ARG ARG A . n A 1 50 THR 50 51 51 THR THR A . n A 1 51 TYR 51 52 52 TYR TYR A . n A 1 52 GLN 52 53 53 GLN GLN A . n A 1 53 THR 53 54 54 THR THR A . n A 1 54 GLU 54 55 55 GLU GLU A . n A 1 55 VAL 55 56 56 VAL VAL A . n A 1 56 GLN 56 57 57 GLN GLN A . n A 1 57 VAL 57 58 58 VAL VAL A . n A 1 58 ALA 58 59 59 ALA ALA A . n A 1 59 PHE 59 60 60 PHE PHE A . n A 1 60 GLU 60 61 61 GLU GLU A . n A 1 61 LEU 61 62 62 LEU LEU A . n A 1 62 ASP 62 63 63 ASP ASP A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 MG 1 1061 1061 MG MG A . C 2 MG 1 1062 1062 MG MG A . D 3 NA 1 1063 1063 NA NA A . E 4 CF4 1 1064 1064 CF4 CF4 A . F 5 CL 1 1066 1066 CL CL A . G 6 SO4 1 1068 1068 SO4 SO4 A . H 7 HOH 1 2001 2001 HOH HOH A . H 7 HOH 2 2002 2002 HOH HOH A . H 7 HOH 3 2003 2003 HOH HOH A . H 7 HOH 4 2004 2004 HOH HOH A . H 7 HOH 5 2005 2005 HOH HOH A . H 7 HOH 6 2006 2006 HOH HOH A . H 7 HOH 7 2007 2007 HOH HOH A . H 7 HOH 8 2008 2008 HOH HOH A . H 7 HOH 9 2009 2009 HOH HOH A . H 7 HOH 10 2010 2010 HOH HOH A . H 7 HOH 11 2011 2011 HOH HOH A . H 7 HOH 12 2012 2012 HOH HOH A . H 7 HOH 13 2013 2013 HOH HOH A . H 7 HOH 14 2014 2014 HOH HOH A . H 7 HOH 15 2015 2015 HOH HOH A . H 7 HOH 16 2016 2016 HOH HOH A . H 7 HOH 17 2017 2017 HOH HOH A . H 7 HOH 18 2018 2018 HOH HOH A . H 7 HOH 19 2019 2019 HOH HOH A . H 7 HOH 20 2020 2020 HOH HOH A . H 7 HOH 21 2021 2021 HOH HOH A . H 7 HOH 22 2022 2022 HOH HOH A . H 7 HOH 23 2023 2023 HOH HOH A . H 7 HOH 24 2024 2024 HOH HOH A . H 7 HOH 25 2025 2025 HOH HOH A . H 7 HOH 26 2026 2026 HOH HOH A . H 7 HOH 27 2027 2027 HOH HOH A . H 7 HOH 28 2028 2028 HOH HOH A . H 7 HOH 29 2029 2029 HOH HOH A . H 7 HOH 30 2030 2030 HOH HOH A . H 7 HOH 31 2031 2031 HOH HOH A . H 7 HOH 32 2032 2032 HOH HOH A . H 7 HOH 33 2033 2033 HOH HOH A . H 7 HOH 34 2034 2034 HOH HOH A . H 7 HOH 35 2035 2035 HOH HOH A . H 7 HOH 36 2036 2036 HOH HOH A . H 7 HOH 37 2037 2037 HOH HOH A . H 7 HOH 38 2038 2038 HOH HOH A . H 7 HOH 39 2039 2039 HOH HOH A . H 7 HOH 40 2040 2040 HOH HOH A . H 7 HOH 41 2041 2041 HOH HOH A . H 7 HOH 42 2042 2042 HOH HOH A . H 7 HOH 43 2043 2043 HOH HOH A . H 7 HOH 44 2044 2044 HOH HOH A . H 7 HOH 45 2045 2045 HOH HOH A . H 7 HOH 46 2046 2046 HOH HOH A . H 7 HOH 47 2047 2047 HOH HOH A . H 7 HOH 48 2048 2048 HOH HOH A . H 7 HOH 49 2049 2049 HOH HOH A . H 7 HOH 50 2050 2050 HOH HOH A . H 7 HOH 51 2051 2051 HOH HOH A . H 7 HOH 52 2052 2052 HOH HOH A . H 7 HOH 53 2053 2053 HOH HOH A . H 7 HOH 54 2054 2054 HOH HOH A . H 7 HOH 55 2055 2055 HOH HOH A . H 7 HOH 56 2056 2056 HOH HOH A . H 7 HOH 57 2057 2057 HOH HOH A . H 7 HOH 58 2058 2058 HOH HOH A . H 7 HOH 59 2059 2059 HOH HOH A . H 7 HOH 60 2060 2060 HOH HOH A . H 7 HOH 61 2061 2061 HOH HOH A . H 7 HOH 62 2062 2062 HOH HOH A . H 7 HOH 63 2063 2063 HOH HOH A . H 7 HOH 64 2064 2064 HOH HOH A . H 7 HOH 65 2065 2065 HOH HOH A . H 7 HOH 66 2066 2066 HOH HOH A . H 7 HOH 67 2067 2067 HOH HOH A . H 7 HOH 68 2068 2068 HOH HOH A . H 7 HOH 69 2069 2069 HOH HOH A . H 7 HOH 70 2070 2070 HOH HOH A . H 7 HOH 71 2071 2071 HOH HOH A . H 7 HOH 72 2072 2072 HOH HOH A . H 7 HOH 73 2073 2073 HOH HOH A . H 7 HOH 74 2074 2074 HOH HOH A . H 7 HOH 75 2075 2075 HOH HOH A . H 7 HOH 76 2076 2076 HOH HOH A . H 7 HOH 77 2077 2077 HOH HOH A . H 7 HOH 78 2078 2078 HOH HOH A . H 7 HOH 79 2079 2079 HOH HOH A . H 7 HOH 80 2080 2080 HOH HOH A . H 7 HOH 81 2081 2081 HOH HOH A . H 7 HOH 82 2082 2082 HOH HOH A . H 7 HOH 83 2083 2083 HOH HOH A . H 7 HOH 84 2084 2084 HOH HOH A . H 7 HOH 85 2085 2085 HOH HOH A . H 7 HOH 86 2086 2086 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dodecameric _pdbx_struct_assembly.oligomeric_count 12 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3,4,5,6,7,8,9,10,11,12 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 32730 ? 1 MORE -587.9 ? 1 'SSA (A^2)' 26280 ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 5_555 z,x,y 0.0000000000 0.0000000000 1.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 3 'crystal symmetry operation' 9_555 y,z,x 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 4 'crystal symmetry operation' 80_555 -z,x,-y 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 5 'crystal symmetry operation' 59_555 y,-z,-x 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 6 'crystal symmetry operation' 82_555 -y,z,-x 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 7 'crystal symmetry operation' 52_555 x,-y,-z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 8 'crystal symmetry operation' 75_555 -x,y,-z -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 9 'crystal symmetry operation' 54_555 z,-x,-y 0.0000000000 0.0000000000 1.0000000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 10 'crystal symmetry operation' 36_555 -y,-z,x 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 11 'crystal symmetry operation' 31_555 -z,-x,y 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 12 'crystal symmetry operation' 26_555 -x,-y,z -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 # loop_ _pdbx_struct_special_symmetry.id _pdbx_struct_special_symmetry.PDB_model_num _pdbx_struct_special_symmetry.auth_asym_id _pdbx_struct_special_symmetry.auth_comp_id _pdbx_struct_special_symmetry.auth_seq_id _pdbx_struct_special_symmetry.PDB_ins_code _pdbx_struct_special_symmetry.label_asym_id _pdbx_struct_special_symmetry.label_comp_id _pdbx_struct_special_symmetry.label_seq_id 1 1 A NA 1063 ? D NA . 2 1 A CL 1066 ? F CL . 3 1 A SO4 1068 ? G SO4 . 4 1 A SO4 1068 ? G SO4 . 5 1 A HOH 2001 ? H HOH . 6 1 A HOH 2011 ? H HOH . 7 1 A HOH 2028 ? H HOH . 8 1 A HOH 2036 ? H HOH . 9 1 A HOH 2061 ? H HOH . 10 1 A HOH 2086 ? H HOH . # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 OE2 ? A GLU 13 ? A GLU 14 ? 1_555 MG ? C MG . ? A MG 1062 ? 1_555 O ? H HOH . ? A HOH 2022 ? 1_555 86.9 ? 2 OE2 ? A GLU 13 ? A GLU 14 ? 1_555 MG ? C MG . ? A MG 1062 ? 1_555 O ? H HOH . ? A HOH 2023 ? 1_555 93.7 ? 3 O ? H HOH . ? A HOH 2022 ? 1_555 MG ? C MG . ? A MG 1062 ? 1_555 O ? H HOH . ? A HOH 2023 ? 1_555 90.0 ? 4 OE2 ? A GLU 13 ? A GLU 14 ? 1_555 MG ? C MG . ? A MG 1062 ? 1_555 O ? H HOH . ? A HOH 2025 ? 1_555 86.2 ? 5 O ? H HOH . ? A HOH 2022 ? 1_555 MG ? C MG . ? A MG 1062 ? 1_555 O ? H HOH . ? A HOH 2025 ? 1_555 76.7 ? 6 O ? H HOH . ? A HOH 2023 ? 1_555 MG ? C MG . ? A MG 1062 ? 1_555 O ? H HOH . ? A HOH 2025 ? 1_555 166.6 ? 7 OE2 ? A GLU 13 ? A GLU 14 ? 1_555 MG ? C MG . ? A MG 1062 ? 1_555 O ? H HOH . ? A HOH 2030 ? 24_555 90.7 ? 8 O ? H HOH . ? A HOH 2022 ? 1_555 MG ? C MG . ? A MG 1062 ? 1_555 O ? H HOH . ? A HOH 2030 ? 24_555 169.9 ? 9 O ? H HOH . ? A HOH 2023 ? 1_555 MG ? C MG . ? A MG 1062 ? 1_555 O ? H HOH . ? A HOH 2030 ? 24_555 100.0 ? 10 O ? H HOH . ? A HOH 2025 ? 1_555 MG ? C MG . ? A MG 1062 ? 1_555 O ? H HOH . ? A HOH 2030 ? 24_555 93.4 ? 11 OE2 ? A GLU 13 ? A GLU 14 ? 1_555 MG ? C MG . ? A MG 1062 ? 1_555 O ? H HOH . ? A HOH 2038 ? 24_555 168.3 ? 12 O ? H HOH . ? A HOH 2022 ? 1_555 MG ? C MG . ? A MG 1062 ? 1_555 O ? H HOH . ? A HOH 2038 ? 24_555 81.5 ? 13 O ? H HOH . ? A HOH 2023 ? 1_555 MG ? C MG . ? A MG 1062 ? 1_555 O ? H HOH . ? A HOH 2038 ? 24_555 85.6 ? 14 O ? H HOH . ? A HOH 2025 ? 1_555 MG ? C MG . ? A MG 1062 ? 1_555 O ? H HOH . ? A HOH 2038 ? 24_555 91.7 ? 15 O ? H HOH . ? A HOH 2030 ? 24_555 MG ? C MG . ? A MG 1062 ? 1_555 O ? H HOH . ? A HOH 2038 ? 24_555 100.9 ? 16 OD2 ? A ASP 40 ? A ASP 41 ? 80_555 MG ? B MG . ? A MG 1061 ? 1_555 O ? H HOH . ? A HOH 2053 ? 1_555 80.2 ? 17 OD2 ? A ASP 40 ? A ASP 41 ? 80_555 MG ? B MG . ? A MG 1061 ? 1_555 O ? H HOH . ? A HOH 2055 ? 1_555 169.6 ? 18 O ? H HOH . ? A HOH 2053 ? 1_555 MG ? B MG . ? A MG 1061 ? 1_555 O ? H HOH . ? A HOH 2055 ? 1_555 92.7 ? 19 OD2 ? A ASP 40 ? A ASP 41 ? 80_555 MG ? B MG . ? A MG 1061 ? 1_555 O ? H HOH . ? A HOH 2059 ? 80_555 82.1 ? 20 O ? H HOH . ? A HOH 2053 ? 1_555 MG ? B MG . ? A MG 1061 ? 1_555 O ? H HOH . ? A HOH 2059 ? 80_555 92.8 ? 21 O ? H HOH . ? A HOH 2055 ? 1_555 MG ? B MG . ? A MG 1061 ? 1_555 O ? H HOH . ? A HOH 2059 ? 80_555 90.8 ? 22 OD2 ? A ASP 40 ? A ASP 41 ? 80_555 MG ? B MG . ? A MG 1061 ? 1_555 O ? H HOH . ? A HOH 2078 ? 80_555 85.2 ? 23 O ? H HOH . ? A HOH 2053 ? 1_555 MG ? B MG . ? A MG 1061 ? 1_555 O ? H HOH . ? A HOH 2078 ? 80_555 90.8 ? 24 O ? H HOH . ? A HOH 2055 ? 1_555 MG ? B MG . ? A MG 1061 ? 1_555 O ? H HOH . ? A HOH 2078 ? 80_555 102.5 ? 25 O ? H HOH . ? A HOH 2059 ? 80_555 MG ? B MG . ? A MG 1061 ? 1_555 O ? H HOH . ? A HOH 2078 ? 80_555 166.0 ? 26 O ? H HOH . ? A HOH 2011 ? 80_555 NA ? D NA . ? A NA 1063 ? 1_555 O ? H HOH . ? A HOH 2011 ? 59_555 0.1 ? 27 O ? H HOH . ? A HOH 2011 ? 80_555 NA ? D NA . ? A NA 1063 ? 1_555 O ? H HOH . ? A HOH 2011 ? 1_555 0.1 ? 28 O ? H HOH . ? A HOH 2011 ? 59_555 NA ? D NA . ? A NA 1063 ? 1_555 O ? H HOH . ? A HOH 2011 ? 1_555 0.1 ? 29 O ? H HOH . ? A HOH 2011 ? 80_555 NA ? D NA . ? A NA 1063 ? 1_555 O ? H HOH . ? A HOH 2081 ? 1_555 84.6 ? 30 O ? H HOH . ? A HOH 2011 ? 59_555 NA ? D NA . ? A NA 1063 ? 1_555 O ? H HOH . ? A HOH 2081 ? 1_555 84.6 ? 31 O ? H HOH . ? A HOH 2011 ? 1_555 NA ? D NA . ? A NA 1063 ? 1_555 O ? H HOH . ? A HOH 2081 ? 1_555 84.6 ? 32 O ? H HOH . ? A HOH 2011 ? 80_555 NA ? D NA . ? A NA 1063 ? 1_555 O ? H HOH . ? A HOH 2081 ? 80_555 84.6 ? 33 O ? H HOH . ? A HOH 2011 ? 59_555 NA ? D NA . ? A NA 1063 ? 1_555 O ? H HOH . ? A HOH 2081 ? 80_555 84.6 ? 34 O ? H HOH . ? A HOH 2011 ? 1_555 NA ? D NA . ? A NA 1063 ? 1_555 O ? H HOH . ? A HOH 2081 ? 80_555 84.6 ? 35 O ? H HOH . ? A HOH 2081 ? 1_555 NA ? D NA . ? A NA 1063 ? 1_555 O ? H HOH . ? A HOH 2081 ? 80_555 119.1 ? 36 O ? H HOH . ? A HOH 2011 ? 80_555 NA ? D NA . ? A NA 1063 ? 1_555 O ? H HOH . ? A HOH 2081 ? 59_555 84.6 ? 37 O ? H HOH . ? A HOH 2011 ? 59_555 NA ? D NA . ? A NA 1063 ? 1_555 O ? H HOH . ? A HOH 2081 ? 59_555 84.6 ? 38 O ? H HOH . ? A HOH 2011 ? 1_555 NA ? D NA . ? A NA 1063 ? 1_555 O ? H HOH . ? A HOH 2081 ? 59_555 84.6 ? 39 O ? H HOH . ? A HOH 2081 ? 1_555 NA ? D NA . ? A NA 1063 ? 1_555 O ? H HOH . ? A HOH 2081 ? 59_555 119.1 ? 40 O ? H HOH . ? A HOH 2081 ? 80_555 NA ? D NA . ? A NA 1063 ? 1_555 O ? H HOH . ? A HOH 2081 ? 59_555 119.1 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2008-09-30 2 'Structure model' 1 1 2012-06-06 3 'Structure model' 1 2 2023-12-13 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 2 'Structure model' 'Derived calculations' 3 2 'Structure model' 'Non-polymer description' 4 2 'Structure model' Other 5 2 'Structure model' 'Version format compliance' 6 3 'Structure model' 'Data collection' 7 3 'Structure model' 'Database references' 8 3 'Structure model' 'Derived calculations' 9 3 'Structure model' Other 10 3 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' chem_comp_atom 2 3 'Structure model' chem_comp_bond 3 3 'Structure model' database_2 4 3 'Structure model' pdbx_database_status 5 3 'Structure model' pdbx_initial_refinement_model 6 3 'Structure model' pdbx_struct_conn_angle 7 3 'Structure model' struct_conn 8 3 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_database_2.pdbx_DOI' 2 3 'Structure model' '_database_2.pdbx_database_accession' 3 3 'Structure model' '_pdbx_database_status.status_code_sf' 4 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 5 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 6 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 7 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 8 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 9 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 10 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_symmetry' 11 3 'Structure model' '_pdbx_struct_conn_angle.ptnr2_auth_seq_id' 12 3 'Structure model' '_pdbx_struct_conn_angle.ptnr2_label_asym_id' 13 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 14 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 15 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 16 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 17 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 18 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 19 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_symmetry' 20 3 'Structure model' '_pdbx_struct_conn_angle.value' 21 3 'Structure model' '_struct_conn.pdbx_dist_value' 22 3 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 23 3 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 24 3 'Structure model' '_struct_conn.ptnr1_label_asym_id' 25 3 'Structure model' '_struct_conn.ptnr1_label_atom_id' 26 3 'Structure model' '_struct_conn.ptnr1_label_comp_id' 27 3 'Structure model' '_struct_conn.ptnr1_label_seq_id' 28 3 'Structure model' '_struct_conn.ptnr1_symmetry' 29 3 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 30 3 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 31 3 'Structure model' '_struct_conn.ptnr2_label_asym_id' 32 3 'Structure model' '_struct_conn.ptnr2_label_atom_id' 33 3 'Structure model' '_struct_conn.ptnr2_label_comp_id' 34 3 'Structure model' '_struct_conn.ptnr2_label_seq_id' 35 3 'Structure model' '_struct_conn.ptnr2_symmetry' 36 3 'Structure model' '_struct_site.pdbx_auth_asym_id' 37 3 'Structure model' '_struct_site.pdbx_auth_comp_id' 38 3 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal REFMAC refinement 5.2.0019 ? 1 XDS 'data reduction' . ? 2 XSCALE 'data scaling' . ? 3 # _pdbx_entry_details.entry_id 2VKG _pdbx_entry_details.compound_details 'ENGINEERED RESIDUE IN CHAIN A, GLU 54 TO ALA' _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details 'COFC4_O5 (CF4): SYNTHETIC FLAVIN' _pdbx_entry_details.sequence_details 'MUTATION OF E45A AND DELETION OF GLU50,GLU51(UNP GLU59, GLU60)' _pdbx_entry_details.has_ligand_of_interest ? # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 O A HOH 2064 ? ? O A HOH 2077 ? ? 2.14 2 1 O A HOH 2074 ? ? O A HOH 2075 ? ? 2.17 # _pdbx_distant_solvent_atoms.id 1 _pdbx_distant_solvent_atoms.PDB_model_num 1 _pdbx_distant_solvent_atoms.auth_atom_id O _pdbx_distant_solvent_atoms.label_alt_id ? _pdbx_distant_solvent_atoms.auth_asym_id A _pdbx_distant_solvent_atoms.auth_comp_id HOH _pdbx_distant_solvent_atoms.auth_seq_id 2001 _pdbx_distant_solvent_atoms.PDB_ins_code ? _pdbx_distant_solvent_atoms.neighbor_macromolecule_distance 6.05 _pdbx_distant_solvent_atoms.neighbor_ligand_distance . # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CF4 O4 O N N 74 CF4 C4 C N N 75 CF4 N3 N N N 76 CF4 C2 C N N 77 CF4 O2 O N N 78 CF4 N1 N N N 79 CF4 C4A C N N 80 CF4 C10 C N N 81 CF4 N5 N N N 82 CF4 C5A C Y N 83 CF4 C6 C Y N 84 CF4 C7 C Y N 85 CF4 C7M C N N 86 CF4 C8 C Y N 87 CF4 C8M C N N 88 CF4 C9 C Y N 89 CF4 C9A C Y N 90 CF4 N10 N N N 91 CF4 "C1'" C N N 92 CF4 "C2'" C N N 93 CF4 "C3'" C N N 94 CF4 "C4'" C N N 95 CF4 "N1'" N N N 96 CF4 "C5'" C N N 97 CF4 "O1'" O N N 98 CF4 "O2'" O N N 99 CF4 H3 H N N 100 CF4 H6 H N N 101 CF4 H7M1 H N N 102 CF4 H7M2 H N N 103 CF4 H7M3 H N N 104 CF4 H8M1 H N N 105 CF4 H8M2 H N N 106 CF4 H8M3 H N N 107 CF4 H9 H N N 108 CF4 "H1'1" H N N 109 CF4 "H1'2" H N N 110 CF4 "H2'1" H N N 111 CF4 "H2'2" H N N 112 CF4 "H3'1" H N N 113 CF4 "H3'2" H N N 114 CF4 "H4'1" H N N 115 CF4 "H4'2" H N N 116 CF4 "H1'" H N N 117 CF4 HA H N N 118 CL CL CL N N 119 GLN N N N N 120 GLN CA C N S 121 GLN C C N N 122 GLN O O N N 123 GLN CB C N N 124 GLN CG C N N 125 GLN CD C N N 126 GLN OE1 O N N 127 GLN NE2 N N N 128 GLN OXT O N N 129 GLN H H N N 130 GLN H2 H N N 131 GLN HA H N N 132 GLN HB2 H N N 133 GLN HB3 H N N 134 GLN HG2 H N N 135 GLN HG3 H N N 136 GLN HE21 H N N 137 GLN HE22 H N N 138 GLN HXT H N N 139 GLU N N N N 140 GLU CA C N S 141 GLU C C N N 142 GLU O O N N 143 GLU CB C N N 144 GLU CG C N N 145 GLU CD C N N 146 GLU OE1 O N N 147 GLU OE2 O N N 148 GLU OXT O N N 149 GLU H H N N 150 GLU H2 H N N 151 GLU HA H N N 152 GLU HB2 H N N 153 GLU HB3 H N N 154 GLU HG2 H N N 155 GLU HG3 H N N 156 GLU HE2 H N N 157 GLU HXT H N N 158 GLY N N N N 159 GLY CA C N N 160 GLY C C N N 161 GLY O O N N 162 GLY OXT O N N 163 GLY H H N N 164 GLY H2 H N N 165 GLY HA2 H N N 166 GLY HA3 H N N 167 GLY HXT H N N 168 HOH O O N N 169 HOH H1 H N N 170 HOH H2 H N N 171 ILE N N N N 172 ILE CA C N S 173 ILE C C N N 174 ILE O O N N 175 ILE CB C N S 176 ILE CG1 C N N 177 ILE CG2 C N N 178 ILE CD1 C N N 179 ILE OXT O N N 180 ILE H H N N 181 ILE H2 H N N 182 ILE HA H N N 183 ILE HB H N N 184 ILE HG12 H N N 185 ILE HG13 H N N 186 ILE HG21 H N N 187 ILE HG22 H N N 188 ILE HG23 H N N 189 ILE HD11 H N N 190 ILE HD12 H N N 191 ILE HD13 H N N 192 ILE HXT H N N 193 LEU N N N N 194 LEU CA C N S 195 LEU C C N N 196 LEU O O N N 197 LEU CB C N N 198 LEU CG C N N 199 LEU CD1 C N N 200 LEU CD2 C N N 201 LEU OXT O N N 202 LEU H H N N 203 LEU H2 H N N 204 LEU HA H N N 205 LEU HB2 H N N 206 LEU HB3 H N N 207 LEU HG H N N 208 LEU HD11 H N N 209 LEU HD12 H N N 210 LEU HD13 H N N 211 LEU HD21 H N N 212 LEU HD22 H N N 213 LEU HD23 H N N 214 LEU HXT H N N 215 LYS N N N N 216 LYS CA C N S 217 LYS C C N N 218 LYS O O N N 219 LYS CB C N N 220 LYS CG C N N 221 LYS CD C N N 222 LYS CE C N N 223 LYS NZ N N N 224 LYS OXT O N N 225 LYS H H N N 226 LYS H2 H N N 227 LYS HA H N N 228 LYS HB2 H N N 229 LYS HB3 H N N 230 LYS HG2 H N N 231 LYS HG3 H N N 232 LYS HD2 H N N 233 LYS HD3 H N N 234 LYS HE2 H N N 235 LYS HE3 H N N 236 LYS HZ1 H N N 237 LYS HZ2 H N N 238 LYS HZ3 H N N 239 LYS HXT H N N 240 MG MG MG N N 241 NA NA NA N N 242 PHE N N N N 243 PHE CA C N S 244 PHE C C N N 245 PHE O O N N 246 PHE CB C N N 247 PHE CG C Y N 248 PHE CD1 C Y N 249 PHE CD2 C Y N 250 PHE CE1 C Y N 251 PHE CE2 C Y N 252 PHE CZ C Y N 253 PHE OXT O N N 254 PHE H H N N 255 PHE H2 H N N 256 PHE HA H N N 257 PHE HB2 H N N 258 PHE HB3 H N N 259 PHE HD1 H N N 260 PHE HD2 H N N 261 PHE HE1 H N N 262 PHE HE2 H N N 263 PHE HZ H N N 264 PHE HXT H N N 265 SER N N N N 266 SER CA C N S 267 SER C C N N 268 SER O O N N 269 SER CB C N N 270 SER OG O N N 271 SER OXT O N N 272 SER H H N N 273 SER H2 H N N 274 SER HA H N N 275 SER HB2 H N N 276 SER HB3 H N N 277 SER HG H N N 278 SER HXT H N N 279 SO4 S S N N 280 SO4 O1 O N N 281 SO4 O2 O N N 282 SO4 O3 O N N 283 SO4 O4 O N N 284 THR N N N N 285 THR CA C N S 286 THR C C N N 287 THR O O N N 288 THR CB C N R 289 THR OG1 O N N 290 THR CG2 C N N 291 THR OXT O N N 292 THR H H N N 293 THR H2 H N N 294 THR HA H N N 295 THR HB H N N 296 THR HG1 H N N 297 THR HG21 H N N 298 THR HG22 H N N 299 THR HG23 H N N 300 THR HXT H N N 301 TRP N N N N 302 TRP CA C N S 303 TRP C C N N 304 TRP O O N N 305 TRP CB C N N 306 TRP CG C Y N 307 TRP CD1 C Y N 308 TRP CD2 C Y N 309 TRP NE1 N Y N 310 TRP CE2 C Y N 311 TRP CE3 C Y N 312 TRP CZ2 C Y N 313 TRP CZ3 C Y N 314 TRP CH2 C Y N 315 TRP OXT O N N 316 TRP H H N N 317 TRP H2 H N N 318 TRP HA H N N 319 TRP HB2 H N N 320 TRP HB3 H N N 321 TRP HD1 H N N 322 TRP HE1 H N N 323 TRP HE3 H N N 324 TRP HZ2 H N N 325 TRP HZ3 H N N 326 TRP HH2 H N N 327 TRP HXT H N N 328 TYR N N N N 329 TYR CA C N S 330 TYR C C N N 331 TYR O O N N 332 TYR CB C N N 333 TYR CG C Y N 334 TYR CD1 C Y N 335 TYR CD2 C Y N 336 TYR CE1 C Y N 337 TYR CE2 C Y N 338 TYR CZ C Y N 339 TYR OH O N N 340 TYR OXT O N N 341 TYR H H N N 342 TYR H2 H N N 343 TYR HA H N N 344 TYR HB2 H N N 345 TYR HB3 H N N 346 TYR HD1 H N N 347 TYR HD2 H N N 348 TYR HE1 H N N 349 TYR HE2 H N N 350 TYR HH H N N 351 TYR HXT H N N 352 VAL N N N N 353 VAL CA C N S 354 VAL C C N N 355 VAL O O N N 356 VAL CB C N N 357 VAL CG1 C N N 358 VAL CG2 C N N 359 VAL OXT O N N 360 VAL H H N N 361 VAL H2 H N N 362 VAL HA H N N 363 VAL HB H N N 364 VAL HG11 H N N 365 VAL HG12 H N N 366 VAL HG13 H N N 367 VAL HG21 H N N 368 VAL HG22 H N N 369 VAL HG23 H N N 370 VAL HXT H N N 371 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CF4 O4 C4 doub N N 70 CF4 C4 N3 sing N N 71 CF4 C4 C4A sing N N 72 CF4 N3 C2 sing N N 73 CF4 C2 O2 doub N N 74 CF4 C2 N1 sing N N 75 CF4 N1 C10 doub N N 76 CF4 C4A C10 sing N N 77 CF4 C4A N5 doub N N 78 CF4 C10 N10 sing N N 79 CF4 N5 C5A sing N N 80 CF4 C5A C6 sing Y N 81 CF4 C5A C9A doub Y N 82 CF4 C6 C7 doub Y N 83 CF4 C7 C7M sing N N 84 CF4 C7 C8 sing Y N 85 CF4 C8 C8M sing N N 86 CF4 C8 C9 doub Y N 87 CF4 C9 C9A sing Y N 88 CF4 C9A N10 sing N N 89 CF4 N10 "C1'" sing N N 90 CF4 "C1'" "C2'" sing N N 91 CF4 "C2'" "C3'" sing N N 92 CF4 "C3'" "C4'" sing N N 93 CF4 "C4'" "N1'" sing N N 94 CF4 "N1'" "C5'" sing N N 95 CF4 "C5'" "O1'" sing N N 96 CF4 "C5'" "O2'" doub N N 97 CF4 N3 H3 sing N N 98 CF4 C6 H6 sing N N 99 CF4 C7M H7M1 sing N N 100 CF4 C7M H7M2 sing N N 101 CF4 C7M H7M3 sing N N 102 CF4 C8M H8M1 sing N N 103 CF4 C8M H8M2 sing N N 104 CF4 C8M H8M3 sing N N 105 CF4 C9 H9 sing N N 106 CF4 "C1'" "H1'1" sing N N 107 CF4 "C1'" "H1'2" sing N N 108 CF4 "C2'" "H2'1" sing N N 109 CF4 "C2'" "H2'2" sing N N 110 CF4 "C3'" "H3'1" sing N N 111 CF4 "C3'" "H3'2" sing N N 112 CF4 "C4'" "H4'1" sing N N 113 CF4 "C4'" "H4'2" sing N N 114 CF4 "N1'" "H1'" sing N N 115 CF4 "O1'" HA sing N N 116 GLN N CA sing N N 117 GLN N H sing N N 118 GLN N H2 sing N N 119 GLN CA C sing N N 120 GLN CA CB sing N N 121 GLN CA HA sing N N 122 GLN C O doub N N 123 GLN C OXT sing N N 124 GLN CB CG sing N N 125 GLN CB HB2 sing N N 126 GLN CB HB3 sing N N 127 GLN CG CD sing N N 128 GLN CG HG2 sing N N 129 GLN CG HG3 sing N N 130 GLN CD OE1 doub N N 131 GLN CD NE2 sing N N 132 GLN NE2 HE21 sing N N 133 GLN NE2 HE22 sing N N 134 GLN OXT HXT sing N N 135 GLU N CA sing N N 136 GLU N H sing N N 137 GLU N H2 sing N N 138 GLU CA C sing N N 139 GLU CA CB sing N N 140 GLU CA HA sing N N 141 GLU C O doub N N 142 GLU C OXT sing N N 143 GLU CB CG sing N N 144 GLU CB HB2 sing N N 145 GLU CB HB3 sing N N 146 GLU CG CD sing N N 147 GLU CG HG2 sing N N 148 GLU CG HG3 sing N N 149 GLU CD OE1 doub N N 150 GLU CD OE2 sing N N 151 GLU OE2 HE2 sing N N 152 GLU OXT HXT sing N N 153 GLY N CA sing N N 154 GLY N H sing N N 155 GLY N H2 sing N N 156 GLY CA C sing N N 157 GLY CA HA2 sing N N 158 GLY CA HA3 sing N N 159 GLY C O doub N N 160 GLY C OXT sing N N 161 GLY OXT HXT sing N N 162 HOH O H1 sing N N 163 HOH O H2 sing N N 164 ILE N CA sing N N 165 ILE N H sing N N 166 ILE N H2 sing N N 167 ILE CA C sing N N 168 ILE CA CB sing N N 169 ILE CA HA sing N N 170 ILE C O doub N N 171 ILE C OXT sing N N 172 ILE CB CG1 sing N N 173 ILE CB CG2 sing N N 174 ILE CB HB sing N N 175 ILE CG1 CD1 sing N N 176 ILE CG1 HG12 sing N N 177 ILE CG1 HG13 sing N N 178 ILE CG2 HG21 sing N N 179 ILE CG2 HG22 sing N N 180 ILE CG2 HG23 sing N N 181 ILE CD1 HD11 sing N N 182 ILE CD1 HD12 sing N N 183 ILE CD1 HD13 sing N N 184 ILE OXT HXT sing N N 185 LEU N CA sing N N 186 LEU N H sing N N 187 LEU N H2 sing N N 188 LEU CA C sing N N 189 LEU CA CB sing N N 190 LEU CA HA sing N N 191 LEU C O doub N N 192 LEU C OXT sing N N 193 LEU CB CG sing N N 194 LEU CB HB2 sing N N 195 LEU CB HB3 sing N N 196 LEU CG CD1 sing N N 197 LEU CG CD2 sing N N 198 LEU CG HG sing N N 199 LEU CD1 HD11 sing N N 200 LEU CD1 HD12 sing N N 201 LEU CD1 HD13 sing N N 202 LEU CD2 HD21 sing N N 203 LEU CD2 HD22 sing N N 204 LEU CD2 HD23 sing N N 205 LEU OXT HXT sing N N 206 LYS N CA sing N N 207 LYS N H sing N N 208 LYS N H2 sing N N 209 LYS CA C sing N N 210 LYS CA CB sing N N 211 LYS CA HA sing N N 212 LYS C O doub N N 213 LYS C OXT sing N N 214 LYS CB CG sing N N 215 LYS CB HB2 sing N N 216 LYS CB HB3 sing N N 217 LYS CG CD sing N N 218 LYS CG HG2 sing N N 219 LYS CG HG3 sing N N 220 LYS CD CE sing N N 221 LYS CD HD2 sing N N 222 LYS CD HD3 sing N N 223 LYS CE NZ sing N N 224 LYS CE HE2 sing N N 225 LYS CE HE3 sing N N 226 LYS NZ HZ1 sing N N 227 LYS NZ HZ2 sing N N 228 LYS NZ HZ3 sing N N 229 LYS OXT HXT sing N N 230 PHE N CA sing N N 231 PHE N H sing N N 232 PHE N H2 sing N N 233 PHE CA C sing N N 234 PHE CA CB sing N N 235 PHE CA HA sing N N 236 PHE C O doub N N 237 PHE C OXT sing N N 238 PHE CB CG sing N N 239 PHE CB HB2 sing N N 240 PHE CB HB3 sing N N 241 PHE CG CD1 doub Y N 242 PHE CG CD2 sing Y N 243 PHE CD1 CE1 sing Y N 244 PHE CD1 HD1 sing N N 245 PHE CD2 CE2 doub Y N 246 PHE CD2 HD2 sing N N 247 PHE CE1 CZ doub Y N 248 PHE CE1 HE1 sing N N 249 PHE CE2 CZ sing Y N 250 PHE CE2 HE2 sing N N 251 PHE CZ HZ sing N N 252 PHE OXT HXT sing N N 253 SER N CA sing N N 254 SER N H sing N N 255 SER N H2 sing N N 256 SER CA C sing N N 257 SER CA CB sing N N 258 SER CA HA sing N N 259 SER C O doub N N 260 SER C OXT sing N N 261 SER CB OG sing N N 262 SER CB HB2 sing N N 263 SER CB HB3 sing N N 264 SER OG HG sing N N 265 SER OXT HXT sing N N 266 SO4 S O1 doub N N 267 SO4 S O2 doub N N 268 SO4 S O3 sing N N 269 SO4 S O4 sing N N 270 THR N CA sing N N 271 THR N H sing N N 272 THR N H2 sing N N 273 THR CA C sing N N 274 THR CA CB sing N N 275 THR CA HA sing N N 276 THR C O doub N N 277 THR C OXT sing N N 278 THR CB OG1 sing N N 279 THR CB CG2 sing N N 280 THR CB HB sing N N 281 THR OG1 HG1 sing N N 282 THR CG2 HG21 sing N N 283 THR CG2 HG22 sing N N 284 THR CG2 HG23 sing N N 285 THR OXT HXT sing N N 286 TRP N CA sing N N 287 TRP N H sing N N 288 TRP N H2 sing N N 289 TRP CA C sing N N 290 TRP CA CB sing N N 291 TRP CA HA sing N N 292 TRP C O doub N N 293 TRP C OXT sing N N 294 TRP CB CG sing N N 295 TRP CB HB2 sing N N 296 TRP CB HB3 sing N N 297 TRP CG CD1 doub Y N 298 TRP CG CD2 sing Y N 299 TRP CD1 NE1 sing Y N 300 TRP CD1 HD1 sing N N 301 TRP CD2 CE2 doub Y N 302 TRP CD2 CE3 sing Y N 303 TRP NE1 CE2 sing Y N 304 TRP NE1 HE1 sing N N 305 TRP CE2 CZ2 sing Y N 306 TRP CE3 CZ3 doub Y N 307 TRP CE3 HE3 sing N N 308 TRP CZ2 CH2 doub Y N 309 TRP CZ2 HZ2 sing N N 310 TRP CZ3 CH2 sing Y N 311 TRP CZ3 HZ3 sing N N 312 TRP CH2 HH2 sing N N 313 TRP OXT HXT sing N N 314 TYR N CA sing N N 315 TYR N H sing N N 316 TYR N H2 sing N N 317 TYR CA C sing N N 318 TYR CA CB sing N N 319 TYR CA HA sing N N 320 TYR C O doub N N 321 TYR C OXT sing N N 322 TYR CB CG sing N N 323 TYR CB HB2 sing N N 324 TYR CB HB3 sing N N 325 TYR CG CD1 doub Y N 326 TYR CG CD2 sing Y N 327 TYR CD1 CE1 sing Y N 328 TYR CD1 HD1 sing N N 329 TYR CD2 CE2 doub Y N 330 TYR CD2 HD2 sing N N 331 TYR CE1 CZ doub Y N 332 TYR CE1 HE1 sing N N 333 TYR CE2 CZ sing Y N 334 TYR CE2 HE2 sing N N 335 TYR CZ OH sing N N 336 TYR OH HH sing N N 337 TYR OXT HXT sing N N 338 VAL N CA sing N N 339 VAL N H sing N N 340 VAL N H2 sing N N 341 VAL CA C sing N N 342 VAL CA CB sing N N 343 VAL CA HA sing N N 344 VAL C O doub N N 345 VAL C OXT sing N N 346 VAL CB CG1 sing N N 347 VAL CB CG2 sing N N 348 VAL CB HB sing N N 349 VAL CG1 HG11 sing N N 350 VAL CG1 HG12 sing N N 351 VAL CG1 HG13 sing N N 352 VAL CG2 HG21 sing N N 353 VAL CG2 HG22 sing N N 354 VAL CG2 HG23 sing N N 355 VAL OXT HXT sing N N 356 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'MAGNESIUM ION' MG 3 'SODIUM ION' NA 4 '[4-(7,8-dimethyl-2,4-dioxo-3,4-dihydrobenzo[g]pteridin-10(2H)-yl)butyl]carbamic acid' CF4 5 'CHLORIDE ION' CL 6 'SULFATE ION' SO4 7 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 2CCC _pdbx_initial_refinement_model.details 'PDB ENTRY 2CCC' #