data_2VMC # _entry.id 2VMC # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.382 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2VMC pdb_00002vmc 10.2210/pdb2vmc/pdb PDBE EBI-34032 ? ? WWPDB D_1290034032 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.content_type _pdbx_database_related.details PDB 2VM9 unspecified 'NATIVE STRUCTURE OF THE RECOMBINANT DISCOIDIN II OF DICTYOSTELIUM DISCOIDEUM AT 1.75 ANGSTROM' PDB 2VME unspecified 'STRUCTURE OF THE WILD-TYPE DISCOIDIN II FROM DICTYOSTELIUM DISCOIDEUM' PDB 2VMD unspecified 'STRUCTURE OF THE COMPLEX OF DISCOIDIN II FROM DICTYOSTELIUM DISCOIDEUM WITH BETA-METHYL-GALACTOSE' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 2VMC _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.SG_entry . _pdbx_database_status.recvd_initial_deposition_date 2008-01-25 _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Saboia, K.' 1 'Satre, M.' 2 'Imberty, A.' 3 'Varrot, A.' 4 # _citation.id primary _citation.title 'Structure Determination of Discoidin II from Dictyostelium Discoideum and Carbohydrate Binding Properties of the Lectin Domain.' _citation.journal_abbrev Proteins _citation.journal_volume 73 _citation.page_first 43 _citation.page_last ? _citation.year 2008 _citation.journal_id_ASTM PSFGEY _citation.country US _citation.journal_id_ISSN 0887-3585 _citation.journal_id_CSD 0867 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 18384150 _citation.pdbx_database_id_DOI 10.1002/PROT.22038 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Aragao, K.S.' 1 ? primary 'Satre, M.' 2 ? primary 'Imberty, A.' 3 ? primary 'Varrot, A.' 4 ? # _cell.entry_id 2VMC _cell.length_a 82.520 _cell.length_b 82.520 _cell.length_c 261.600 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 18 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2VMC _symmetry.space_group_name_H-M 'H 3 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 155 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man DISCOIDIN-2 28605.727 1 ? ? ? 'GALACTOSE-BINDING DOMAIN 163-257' 2 non-polymer syn 'CHLORIDE ION' 35.453 2 ? ? ? ? 3 non-polymer syn 'CALCIUM ION' 40.078 1 ? ? ? ? 4 non-polymer man 2-acetamido-2-deoxy-alpha-D-galactopyranose 221.208 1 ? ? ? ? 5 non-polymer man 2-acetamido-2-deoxy-beta-D-galactopyranose 221.208 1 ? ? ? ? 6 non-polymer syn '2-(2-{2-[2-(2-METHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHANOL' 252.305 2 ? ? ? ? 7 non-polymer syn 1,2-ETHANEDIOL 62.068 1 ? ? ? ? 8 water nat water 18.015 358 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'DISCOIDIN II' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MSVPAGSVSCLANALLNLRSSTDYNADHGVKNSILNFSNSKDASRFDGSESWSSSVLDKNQFIVAGSDSVKHFVAISTQG RGDHDQWVTSYKLRYTLDNVNWVEYNNGEIINANKDRNSIVTINFNPPIKARSIAIHPQTYNNHISLRWELYALPVKSYS NPSVQVGEVSIGDRSLNSGTGSRTIVRHVKFPVEFLSVPIVSIGCKKVDAHTDNGQMRWEGKSENITTKGFDLTFITWGN NAVYDLTFDYVAVEFNN ; _entity_poly.pdbx_seq_one_letter_code_can ;MSVPAGSVSCLANALLNLRSSTDYNADHGVKNSILNFSNSKDASRFDGSESWSSSVLDKNQFIVAGSDSVKHFVAISTQG RGDHDQWVTSYKLRYTLDNVNWVEYNNGEIINANKDRNSIVTINFNPPIKARSIAIHPQTYNNHISLRWELYALPVKSYS NPSVQVGEVSIGDRSLNSGTGSRTIVRHVKFPVEFLSVPIVSIGCKKVDAHTDNGQMRWEGKSENITTKGFDLTFITWGN NAVYDLTFDYVAVEFNN ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 SER n 1 3 VAL n 1 4 PRO n 1 5 ALA n 1 6 GLY n 1 7 SER n 1 8 VAL n 1 9 SER n 1 10 CYS n 1 11 LEU n 1 12 ALA n 1 13 ASN n 1 14 ALA n 1 15 LEU n 1 16 LEU n 1 17 ASN n 1 18 LEU n 1 19 ARG n 1 20 SER n 1 21 SER n 1 22 THR n 1 23 ASP n 1 24 TYR n 1 25 ASN n 1 26 ALA n 1 27 ASP n 1 28 HIS n 1 29 GLY n 1 30 VAL n 1 31 LYS n 1 32 ASN n 1 33 SER n 1 34 ILE n 1 35 LEU n 1 36 ASN n 1 37 PHE n 1 38 SER n 1 39 ASN n 1 40 SER n 1 41 LYS n 1 42 ASP n 1 43 ALA n 1 44 SER n 1 45 ARG n 1 46 PHE n 1 47 ASP n 1 48 GLY n 1 49 SER n 1 50 GLU n 1 51 SER n 1 52 TRP n 1 53 SER n 1 54 SER n 1 55 SER n 1 56 VAL n 1 57 LEU n 1 58 ASP n 1 59 LYS n 1 60 ASN n 1 61 GLN n 1 62 PHE n 1 63 ILE n 1 64 VAL n 1 65 ALA n 1 66 GLY n 1 67 SER n 1 68 ASP n 1 69 SER n 1 70 VAL n 1 71 LYS n 1 72 HIS n 1 73 PHE n 1 74 VAL n 1 75 ALA n 1 76 ILE n 1 77 SER n 1 78 THR n 1 79 GLN n 1 80 GLY n 1 81 ARG n 1 82 GLY n 1 83 ASP n 1 84 HIS n 1 85 ASP n 1 86 GLN n 1 87 TRP n 1 88 VAL n 1 89 THR n 1 90 SER n 1 91 TYR n 1 92 LYS n 1 93 LEU n 1 94 ARG n 1 95 TYR n 1 96 THR n 1 97 LEU n 1 98 ASP n 1 99 ASN n 1 100 VAL n 1 101 ASN n 1 102 TRP n 1 103 VAL n 1 104 GLU n 1 105 TYR n 1 106 ASN n 1 107 ASN n 1 108 GLY n 1 109 GLU n 1 110 ILE n 1 111 ILE n 1 112 ASN n 1 113 ALA n 1 114 ASN n 1 115 LYS n 1 116 ASP n 1 117 ARG n 1 118 ASN n 1 119 SER n 1 120 ILE n 1 121 VAL n 1 122 THR n 1 123 ILE n 1 124 ASN n 1 125 PHE n 1 126 ASN n 1 127 PRO n 1 128 PRO n 1 129 ILE n 1 130 LYS n 1 131 ALA n 1 132 ARG n 1 133 SER n 1 134 ILE n 1 135 ALA n 1 136 ILE n 1 137 HIS n 1 138 PRO n 1 139 GLN n 1 140 THR n 1 141 TYR n 1 142 ASN n 1 143 ASN n 1 144 HIS n 1 145 ILE n 1 146 SER n 1 147 LEU n 1 148 ARG n 1 149 TRP n 1 150 GLU n 1 151 LEU n 1 152 TYR n 1 153 ALA n 1 154 LEU n 1 155 PRO n 1 156 VAL n 1 157 LYS n 1 158 SER n 1 159 TYR n 1 160 SER n 1 161 ASN n 1 162 PRO n 1 163 SER n 1 164 VAL n 1 165 GLN n 1 166 VAL n 1 167 GLY n 1 168 GLU n 1 169 VAL n 1 170 SER n 1 171 ILE n 1 172 GLY n 1 173 ASP n 1 174 ARG n 1 175 SER n 1 176 LEU n 1 177 ASN n 1 178 SER n 1 179 GLY n 1 180 THR n 1 181 GLY n 1 182 SER n 1 183 ARG n 1 184 THR n 1 185 ILE n 1 186 VAL n 1 187 ARG n 1 188 HIS n 1 189 VAL n 1 190 LYS n 1 191 PHE n 1 192 PRO n 1 193 VAL n 1 194 GLU n 1 195 PHE n 1 196 LEU n 1 197 SER n 1 198 VAL n 1 199 PRO n 1 200 ILE n 1 201 VAL n 1 202 SER n 1 203 ILE n 1 204 GLY n 1 205 CYS n 1 206 LYS n 1 207 LYS n 1 208 VAL n 1 209 ASP n 1 210 ALA n 1 211 HIS n 1 212 THR n 1 213 ASP n 1 214 ASN n 1 215 GLY n 1 216 GLN n 1 217 MET n 1 218 ARG n 1 219 TRP n 1 220 GLU n 1 221 GLY n 1 222 LYS n 1 223 SER n 1 224 GLU n 1 225 ASN n 1 226 ILE n 1 227 THR n 1 228 THR n 1 229 LYS n 1 230 GLY n 1 231 PHE n 1 232 ASP n 1 233 LEU n 1 234 THR n 1 235 PHE n 1 236 ILE n 1 237 THR n 1 238 TRP n 1 239 GLY n 1 240 ASN n 1 241 ASN n 1 242 ALA n 1 243 VAL n 1 244 TYR n 1 245 ASP n 1 246 LEU n 1 247 THR n 1 248 PHE n 1 249 ASP n 1 250 TYR n 1 251 VAL n 1 252 ALA n 1 253 VAL n 1 254 GLU n 1 255 PHE n 1 256 ASN n 1 257 ASN n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name 'SLIME MOLD' _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain AX2 _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'DICTYOSTELIUM DISCOIDEUM' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 366501 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'ESCHERICHIA COLI' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant 'ROSETTA2 PLYSS' _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type PLASMID _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name PPROEXHTB _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code DIS2_DICDI _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin ? _struct_ref.pdbx_db_accession P42530 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 2VMC _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 257 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P42530 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 257 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 257 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight 1PG non-polymer . '2-(2-{2-[2-(2-METHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHANOL' ? 'C11 H24 O6' 252.305 A2G 'D-saccharide, alpha linking' . 2-acetamido-2-deoxy-alpha-D-galactopyranose ;N-acetyl-alpha-D-galactosamine; 2-acetamido-2-deoxy-alpha-D-galactose; 2-acetamido-2-deoxy-D-galactose; 2-acetamido-2-deoxy-galactose; N-ACETYL-2-DEOXY-2-AMINO-GALACTOSE ; 'C8 H15 N O6' 221.208 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CA non-polymer . 'CALCIUM ION' ? 'Ca 2' 40.078 CL non-polymer . 'CHLORIDE ION' ? 'Cl -1' 35.453 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 EDO non-polymer . 1,2-ETHANEDIOL 'ETHYLENE GLYCOL' 'C2 H6 O2' 62.068 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 NGA 'D-saccharide, beta linking' . 2-acetamido-2-deoxy-beta-D-galactopyranose ;N-acetyl-beta-D-galactosamine; 2-acetamido-2-deoxy-beta-D-galactose; 2-acetamido-2-deoxy-D-galactose; 2-acetamido-2-deoxy-galactose; N-ACETYL-D-GALACTOSAMINE ; 'C8 H15 N O6' 221.208 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 2VMC _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.96 _exptl_crystal.density_percent_sol 58.53 _exptl_crystal.description NONE # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method ? _exptl_crystal_grow.temp ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.5 _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details '25% PEG5550MME, 100 MM HEPES PH 7.5' # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC CCD' _diffrn_detector.pdbx_collection_date 2006-11-30 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.934 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'ESRF BEAMLINE ID14-1' _diffrn_source.pdbx_synchrotron_site ESRF _diffrn_source.pdbx_synchrotron_beamline ID14-1 _diffrn_source.pdbx_wavelength 0.934 _diffrn_source.pdbx_wavelength_list ? # _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.entry_id 2VMC _reflns.observed_criterion_sigma_I 2.0 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 48.20 _reflns.d_resolution_high 1.90 _reflns.number_obs 27554 _reflns.number_all ? _reflns.percent_possible_obs 100.0 _reflns.pdbx_Rmerge_I_obs 0.10 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 6.50 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 6.0 # _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_ordinal 1 _reflns_shell.d_res_high 1.90 _reflns_shell.d_res_low 2.00 _reflns_shell.percent_possible_all 100.0 _reflns_shell.Rmerge_I_obs 0.34 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 2.10 _reflns_shell.pdbx_redundancy 6.1 # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 2VMC _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 26162 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 43.60 _refine.ls_d_res_high 1.90 _refine.ls_percent_reflns_obs 100.0 _refine.ls_R_factor_obs 0.159 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.157 _refine.ls_R_factor_R_free 0.198 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.100 _refine.ls_number_reflns_R_free 1392 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.956 _refine.correlation_coeff_Fo_to_Fc_free 0.936 _refine.B_iso_mean 16.44 _refine.aniso_B[1][1] 0.37000 _refine.aniso_B[2][2] 0.37000 _refine.aniso_B[3][3] -0.56000 _refine.aniso_B[1][2] 0.19000 _refine.aniso_B[1][3] 0.00000 _refine.aniso_B[2][3] 0.00000 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ;HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS. RESIDUES 1-5 ARE DISORDERED. DISORDERED SIDE CHAINS WERE MODELLED STEREOCHEMICALLY ; _refine.pdbx_starting_model 'PDB ENTRY 2VM9' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.117 _refine.pdbx_overall_ESU_R_Free 0.117 _refine.overall_SU_ML 0.074 _refine.pdbx_overall_phase_error ? _refine.overall_SU_B 2.454 _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1986 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 64 _refine_hist.number_atoms_solvent 358 _refine_hist.number_atoms_total 2408 _refine_hist.d_res_high 1.90 _refine_hist.d_res_low 43.60 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.016 0.021 ? 2127 'X-RAY DIFFRACTION' ? r_bond_other_d ? ? ? ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.412 1.936 ? 2892 'X-RAY DIFFRACTION' ? r_angle_other_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 7.196 5.000 ? 266 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 37.198 24.615 ? 104 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 12.278 15.000 ? 336 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 17.647 15.000 ? 11 'X-RAY DIFFRACTION' ? r_chiral_restr 0.109 0.200 ? 319 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.006 0.020 ? 1628 'X-RAY DIFFRACTION' ? r_gen_planes_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_refined 0.191 0.200 ? 853 'X-RAY DIFFRACTION' ? r_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_refined 0.297 0.200 ? 1398 'X-RAY DIFFRACTION' ? r_nbtor_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 0.142 0.200 ? 236 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 0.184 0.200 ? 83 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 0.121 0.200 ? 49 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 0.790 1.500 ? 1330 'X-RAY DIFFRACTION' ? r_mcbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcangle_it 1.316 2.000 ? 2091 'X-RAY DIFFRACTION' ? r_mcangle_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_scbond_it 2.018 3.000 ? 927 'X-RAY DIFFRACTION' ? r_scbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_scangle_it 2.945 4.500 ? 795 'X-RAY DIFFRACTION' ? r_scangle_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_long_range_B_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_long_range_B_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 1.90 _refine_ls_shell.d_res_low 1.95 _refine_ls_shell.number_reflns_R_work 1909 _refine_ls_shell.R_factor_R_work 0.1970 _refine_ls_shell.percent_reflns_obs ? _refine_ls_shell.R_factor_R_free 0.2700 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 103 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? # _struct.entry_id 2VMC _struct.title 'Structure of the complex of discoidin II from Dictyostelium discoideum with N-acetyl-galactosamine' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2VMC _struct_keywords.pdbx_keywords 'CELL ADHESION' _struct_keywords.text 'DDR, LECTIN, AGGREGATION, CELL ADHESION' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 2 ? D N N 3 ? E N N 4 ? F N N 5 ? G N N 6 ? H N N 6 ? I N N 7 ? J N N 8 ? # _struct_biol.id 1 # _struct_conf.conf_type_id HELX_P _struct_conf.id HELX_P1 _struct_conf.pdbx_PDB_helix_id 1 _struct_conf.beg_label_comp_id CYS _struct_conf.beg_label_asym_id A _struct_conf.beg_label_seq_id 10 _struct_conf.pdbx_beg_PDB_ins_code ? _struct_conf.end_label_comp_id ALA _struct_conf.end_label_asym_id A _struct_conf.end_label_seq_id 14 _struct_conf.pdbx_end_PDB_ins_code ? _struct_conf.beg_auth_comp_id CYS _struct_conf.beg_auth_asym_id A _struct_conf.beg_auth_seq_id 10 _struct_conf.end_auth_comp_id ALA _struct_conf.end_auth_asym_id A _struct_conf.end_auth_seq_id 14 _struct_conf.pdbx_PDB_helix_class 1 _struct_conf.details ? _struct_conf.pdbx_PDB_helix_length 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? A ASN 39 OD1 ? ? ? 1_555 D CA . CA ? ? A ASN 39 A CA 500 1_555 ? ? ? ? ? ? ? 2.448 ? ? metalc2 metalc ? ? A SER 40 O ? ? ? 1_555 D CA . CA ? ? A SER 40 A CA 500 1_555 ? ? ? ? ? ? ? 2.348 ? ? metalc3 metalc ? ? A ASP 47 OD1 ? ? ? 1_555 D CA . CA ? ? A ASP 47 A CA 500 1_555 ? ? ? ? ? ? ? 2.411 ? ? metalc4 metalc ? ? D CA . CA ? ? ? 1_555 J HOH . O ? ? A CA 500 A HOH 2078 1_555 ? ? ? ? ? ? ? 2.555 ? ? metalc5 metalc ? ? D CA . CA ? ? ? 1_555 J HOH . O ? ? A CA 500 A HOH 2082 1_555 ? ? ? ? ? ? ? 2.619 ? ? metalc6 metalc ? ? D CA . CA ? ? ? 1_555 J HOH . O ? ? A CA 500 A HOH 2098 1_555 ? ? ? ? ? ? ? 2.470 ? ? metalc7 metalc ? ? D CA . CA ? ? ? 1_555 J HOH . O ? ? A CA 500 A HOH 2099 1_555 ? ? ? ? ? ? ? 2.493 ? ? # _struct_conn_type.id metalc _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 ASN 126 A . ? ASN 126 A PRO 127 A ? PRO 127 A 1 -2.34 2 ASN 126 A . ? ASN 126 A PRO 127 A ? PRO 127 A 1 1.98 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA ? 6 ? AB ? 3 ? AC ? 3 ? AD ? 3 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA 1 2 ? anti-parallel AA 2 3 ? anti-parallel AA 4 5 ? anti-parallel AA 5 6 ? anti-parallel AC 1 2 ? anti-parallel AC 2 3 ? anti-parallel AD 1 2 ? anti-parallel AD 2 3 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA 1 ASN A 17 ? SER A 20 ? ASN A 17 SER A 20 AA 2 ILE A 63 ? GLY A 66 ? ILE A 63 GLY A 66 AA 3 ILE A 129 ? ASN A 142 ? ILE A 129 ASN A 142 AA 4 TRP A 87 ? THR A 96 ? TRP A 87 THR A 96 AA 5 TRP A 102 ? GLU A 104 ? TRP A 102 GLU A 104 AA 6 ILE A 111 ? ASN A 114 ? ILE A 111 ASN A 114 AB 1 VAL A 121 ? PHE A 125 ? VAL A 121 PHE A 125 AB 2 LYS A 71 ? GLN A 79 ? LYS A 71 GLN A 79 AB 3 SER A 146 ? ALA A 153 ? SER A 146 ALA A 153 AC 1 SER A 163 ? SER A 170 ? SER A 163 SER A 170 AC 2 VAL A 243 ? GLU A 254 ? VAL A 243 GLU A 254 AC 3 ILE A 200 ? ALA A 210 ? ILE A 200 ALA A 210 AD 1 ARG A 183 ? LYS A 190 ? ARG A 183 LYS A 190 AD 2 GLY A 230 ? THR A 237 ? GLY A 230 THR A 237 AD 3 GLU A 220 ? GLU A 224 ? GLU A 220 GLU A 224 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA 1 2 N ARG A 19 ? N ARG A 19 O VAL A 64 ? O VAL A 64 AA 2 3 N ALA A 65 ? N ALA A 65 O ILE A 134 ? O ILE A 134 AA 4 5 N TYR A 95 ? N TYR A 95 O VAL A 103 ? O VAL A 103 AA 5 6 N TYR A 91 ? N TYR A 91 O ILE A 111 ? O ILE A 111 AC 1 2 N VAL A 169 ? N VAL A 169 O PHE A 248 ? O PHE A 248 AC 2 3 N VAL A 253 ? N VAL A 253 O ILE A 200 ? O ILE A 200 AD 1 2 N VAL A 189 ? N VAL A 189 O PHE A 231 ? O PHE A 231 AD 2 3 N ILE A 236 ? N ILE A 236 O GLU A 220 ? O GLU A 220 # _database_PDB_matrix.entry_id 2VMC _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 2VMC _atom_sites.fract_transf_matrix[1][1] 0.012118 _atom_sites.fract_transf_matrix[1][2] 0.006996 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.013993 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.003823 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C CA CL N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 1 ? ? ? A . n A 1 2 SER 2 2 ? ? ? A . n A 1 3 VAL 3 3 ? ? ? A . n A 1 4 PRO 4 4 ? ? ? A . n A 1 5 ALA 5 5 ? ? ? A . n A 1 6 GLY 6 6 6 GLY GLY A . n A 1 7 SER 7 7 7 SER SER A . n A 1 8 VAL 8 8 8 VAL VAL A . n A 1 9 SER 9 9 9 SER SER A . n A 1 10 CYS 10 10 10 CYS CYS A . n A 1 11 LEU 11 11 11 LEU LEU A . n A 1 12 ALA 12 12 12 ALA ALA A . n A 1 13 ASN 13 13 13 ASN ASN A . n A 1 14 ALA 14 14 14 ALA ALA A . n A 1 15 LEU 15 15 15 LEU LEU A . n A 1 16 LEU 16 16 16 LEU LEU A . n A 1 17 ASN 17 17 17 ASN ASN A . n A 1 18 LEU 18 18 18 LEU LEU A . n A 1 19 ARG 19 19 19 ARG ARG A . n A 1 20 SER 20 20 20 SER SER A . n A 1 21 SER 21 21 21 SER SER A . n A 1 22 THR 22 22 22 THR THR A . n A 1 23 ASP 23 23 23 ASP ASP A . n A 1 24 TYR 24 24 24 TYR TYR A . n A 1 25 ASN 25 25 25 ASN ASN A . n A 1 26 ALA 26 26 26 ALA ALA A . n A 1 27 ASP 27 27 27 ASP ASP A . n A 1 28 HIS 28 28 28 HIS HIS A . n A 1 29 GLY 29 29 29 GLY GLY A . n A 1 30 VAL 30 30 30 VAL VAL A . n A 1 31 LYS 31 31 31 LYS LYS A . n A 1 32 ASN 32 32 32 ASN ASN A . n A 1 33 SER 33 33 33 SER SER A . n A 1 34 ILE 34 34 34 ILE ILE A . n A 1 35 LEU 35 35 35 LEU LEU A . n A 1 36 ASN 36 36 36 ASN ASN A . n A 1 37 PHE 37 37 37 PHE PHE A . n A 1 38 SER 38 38 38 SER SER A . n A 1 39 ASN 39 39 39 ASN ASN A . n A 1 40 SER 40 40 40 SER SER A . n A 1 41 LYS 41 41 41 LYS LYS A . n A 1 42 ASP 42 42 42 ASP ASP A . n A 1 43 ALA 43 43 43 ALA ALA A . n A 1 44 SER 44 44 44 SER SER A . n A 1 45 ARG 45 45 45 ARG ARG A . n A 1 46 PHE 46 46 46 PHE PHE A . n A 1 47 ASP 47 47 47 ASP ASP A . n A 1 48 GLY 48 48 48 GLY GLY A . n A 1 49 SER 49 49 49 SER SER A . n A 1 50 GLU 50 50 50 GLU GLU A . n A 1 51 SER 51 51 51 SER SER A . n A 1 52 TRP 52 52 52 TRP TRP A . n A 1 53 SER 53 53 53 SER SER A . n A 1 54 SER 54 54 54 SER SER A . n A 1 55 SER 55 55 55 SER SER A . n A 1 56 VAL 56 56 56 VAL VAL A . n A 1 57 LEU 57 57 57 LEU LEU A . n A 1 58 ASP 58 58 58 ASP ASP A . n A 1 59 LYS 59 59 59 LYS LYS A . n A 1 60 ASN 60 60 60 ASN ASN A . n A 1 61 GLN 61 61 61 GLN GLN A . n A 1 62 PHE 62 62 62 PHE PHE A . n A 1 63 ILE 63 63 63 ILE ILE A . n A 1 64 VAL 64 64 64 VAL VAL A . n A 1 65 ALA 65 65 65 ALA ALA A . n A 1 66 GLY 66 66 66 GLY GLY A . n A 1 67 SER 67 67 67 SER SER A . n A 1 68 ASP 68 68 68 ASP ASP A . n A 1 69 SER 69 69 69 SER SER A . n A 1 70 VAL 70 70 70 VAL VAL A . n A 1 71 LYS 71 71 71 LYS LYS A . n A 1 72 HIS 72 72 72 HIS HIS A . n A 1 73 PHE 73 73 73 PHE PHE A . n A 1 74 VAL 74 74 74 VAL VAL A . n A 1 75 ALA 75 75 75 ALA ALA A . n A 1 76 ILE 76 76 76 ILE ILE A . n A 1 77 SER 77 77 77 SER SER A . n A 1 78 THR 78 78 78 THR THR A . n A 1 79 GLN 79 79 79 GLN GLN A . n A 1 80 GLY 80 80 80 GLY GLY A . n A 1 81 ARG 81 81 81 ARG ARG A . n A 1 82 GLY 82 82 82 GLY GLY A . n A 1 83 ASP 83 83 83 ASP ASP A . n A 1 84 HIS 84 84 84 HIS HIS A . n A 1 85 ASP 85 85 85 ASP ASP A . n A 1 86 GLN 86 86 86 GLN GLN A . n A 1 87 TRP 87 87 87 TRP TRP A . n A 1 88 VAL 88 88 88 VAL VAL A . n A 1 89 THR 89 89 89 THR THR A . n A 1 90 SER 90 90 90 SER SER A . n A 1 91 TYR 91 91 91 TYR TYR A . n A 1 92 LYS 92 92 92 LYS LYS A . n A 1 93 LEU 93 93 93 LEU LEU A . n A 1 94 ARG 94 94 94 ARG ARG A . n A 1 95 TYR 95 95 95 TYR TYR A . n A 1 96 THR 96 96 96 THR THR A . n A 1 97 LEU 97 97 97 LEU LEU A . n A 1 98 ASP 98 98 98 ASP ASP A . n A 1 99 ASN 99 99 99 ASN ASN A . n A 1 100 VAL 100 100 100 VAL VAL A . n A 1 101 ASN 101 101 101 ASN ASN A . n A 1 102 TRP 102 102 102 TRP TRP A . n A 1 103 VAL 103 103 103 VAL VAL A . n A 1 104 GLU 104 104 104 GLU GLU A . n A 1 105 TYR 105 105 105 TYR TYR A . n A 1 106 ASN 106 106 106 ASN ASN A . n A 1 107 ASN 107 107 107 ASN ASN A . n A 1 108 GLY 108 108 108 GLY GLY A . n A 1 109 GLU 109 109 109 GLU GLU A . n A 1 110 ILE 110 110 110 ILE ILE A . n A 1 111 ILE 111 111 111 ILE ILE A . n A 1 112 ASN 112 112 112 ASN ASN A . n A 1 113 ALA 113 113 113 ALA ALA A . n A 1 114 ASN 114 114 114 ASN ASN A . n A 1 115 LYS 115 115 115 LYS LYS A . n A 1 116 ASP 116 116 116 ASP ASP A . n A 1 117 ARG 117 117 117 ARG ARG A . n A 1 118 ASN 118 118 118 ASN ASN A . n A 1 119 SER 119 119 119 SER SER A . n A 1 120 ILE 120 120 120 ILE ILE A . n A 1 121 VAL 121 121 121 VAL VAL A . n A 1 122 THR 122 122 122 THR THR A . n A 1 123 ILE 123 123 123 ILE ILE A . n A 1 124 ASN 124 124 124 ASN ASN A . n A 1 125 PHE 125 125 125 PHE PHE A . n A 1 126 ASN 126 126 126 ASN ASN A . n A 1 127 PRO 127 127 127 PRO PRO A . n A 1 128 PRO 128 128 128 PRO PRO A . n A 1 129 ILE 129 129 129 ILE ILE A . n A 1 130 LYS 130 130 130 LYS LYS A . n A 1 131 ALA 131 131 131 ALA ALA A . n A 1 132 ARG 132 132 132 ARG ARG A . n A 1 133 SER 133 133 133 SER SER A . n A 1 134 ILE 134 134 134 ILE ILE A . n A 1 135 ALA 135 135 135 ALA ALA A . n A 1 136 ILE 136 136 136 ILE ILE A . n A 1 137 HIS 137 137 137 HIS HIS A . n A 1 138 PRO 138 138 138 PRO PRO A . n A 1 139 GLN 139 139 139 GLN GLN A . n A 1 140 THR 140 140 140 THR THR A . n A 1 141 TYR 141 141 141 TYR TYR A . n A 1 142 ASN 142 142 142 ASN ASN A . n A 1 143 ASN 143 143 143 ASN ASN A . n A 1 144 HIS 144 144 144 HIS HIS A . n A 1 145 ILE 145 145 145 ILE ILE A . n A 1 146 SER 146 146 146 SER SER A . n A 1 147 LEU 147 147 147 LEU LEU A . n A 1 148 ARG 148 148 148 ARG ARG A . n A 1 149 TRP 149 149 149 TRP TRP A . n A 1 150 GLU 150 150 150 GLU GLU A . n A 1 151 LEU 151 151 151 LEU LEU A . n A 1 152 TYR 152 152 152 TYR TYR A . n A 1 153 ALA 153 153 153 ALA ALA A . n A 1 154 LEU 154 154 154 LEU LEU A . n A 1 155 PRO 155 155 155 PRO PRO A . n A 1 156 VAL 156 156 156 VAL VAL A . n A 1 157 LYS 157 157 157 LYS LYS A . n A 1 158 SER 158 158 158 SER SER A . n A 1 159 TYR 159 159 159 TYR TYR A . n A 1 160 SER 160 160 160 SER SER A . n A 1 161 ASN 161 161 161 ASN ASN A . n A 1 162 PRO 162 162 162 PRO PRO A . n A 1 163 SER 163 163 163 SER SER A . n A 1 164 VAL 164 164 164 VAL VAL A . n A 1 165 GLN 165 165 165 GLN GLN A . n A 1 166 VAL 166 166 166 VAL VAL A . n A 1 167 GLY 167 167 167 GLY GLY A . n A 1 168 GLU 168 168 168 GLU GLU A . n A 1 169 VAL 169 169 169 VAL VAL A . n A 1 170 SER 170 170 170 SER SER A . n A 1 171 ILE 171 171 171 ILE ILE A . n A 1 172 GLY 172 172 172 GLY GLY A . n A 1 173 ASP 173 173 173 ASP ASP A . n A 1 174 ARG 174 174 174 ARG ARG A . n A 1 175 SER 175 175 175 SER SER A . n A 1 176 LEU 176 176 176 LEU LEU A . n A 1 177 ASN 177 177 177 ASN ASN A . n A 1 178 SER 178 178 178 SER SER A . n A 1 179 GLY 179 179 179 GLY GLY A . n A 1 180 THR 180 180 180 THR THR A . n A 1 181 GLY 181 181 181 GLY GLY A . n A 1 182 SER 182 182 182 SER SER A . n A 1 183 ARG 183 183 183 ARG ARG A . n A 1 184 THR 184 184 184 THR THR A . n A 1 185 ILE 185 185 185 ILE ILE A . n A 1 186 VAL 186 186 186 VAL VAL A . n A 1 187 ARG 187 187 187 ARG ARG A . n A 1 188 HIS 188 188 188 HIS HIS A . n A 1 189 VAL 189 189 189 VAL VAL A . n A 1 190 LYS 190 190 190 LYS LYS A . n A 1 191 PHE 191 191 191 PHE PHE A . n A 1 192 PRO 192 192 192 PRO PRO A . n A 1 193 VAL 193 193 193 VAL VAL A . n A 1 194 GLU 194 194 194 GLU GLU A . n A 1 195 PHE 195 195 195 PHE PHE A . n A 1 196 LEU 196 196 196 LEU LEU A . n A 1 197 SER 197 197 197 SER SER A . n A 1 198 VAL 198 198 198 VAL VAL A . n A 1 199 PRO 199 199 199 PRO PRO A . n A 1 200 ILE 200 200 200 ILE ILE A . n A 1 201 VAL 201 201 201 VAL VAL A . n A 1 202 SER 202 202 202 SER SER A . n A 1 203 ILE 203 203 203 ILE ILE A . n A 1 204 GLY 204 204 204 GLY GLY A . n A 1 205 CYS 205 205 205 CYS CYS A . n A 1 206 LYS 206 206 206 LYS LYS A . n A 1 207 LYS 207 207 207 LYS LYS A . n A 1 208 VAL 208 208 208 VAL VAL A . n A 1 209 ASP 209 209 209 ASP ASP A . n A 1 210 ALA 210 210 210 ALA ALA A . n A 1 211 HIS 211 211 211 HIS HIS A . n A 1 212 THR 212 212 212 THR THR A . n A 1 213 ASP 213 213 213 ASP ASP A . n A 1 214 ASN 214 214 214 ASN ASN A . n A 1 215 GLY 215 215 215 GLY GLY A . n A 1 216 GLN 216 216 216 GLN GLN A . n A 1 217 MET 217 217 217 MET MET A . n A 1 218 ARG 218 218 218 ARG ARG A . n A 1 219 TRP 219 219 219 TRP TRP A . n A 1 220 GLU 220 220 220 GLU GLU A . n A 1 221 GLY 221 221 221 GLY GLY A . n A 1 222 LYS 222 222 222 LYS LYS A . n A 1 223 SER 223 223 223 SER SER A . n A 1 224 GLU 224 224 224 GLU GLU A . n A 1 225 ASN 225 225 225 ASN ASN A . n A 1 226 ILE 226 226 226 ILE ILE A . n A 1 227 THR 227 227 227 THR THR A . n A 1 228 THR 228 228 228 THR THR A . n A 1 229 LYS 229 229 229 LYS LYS A . n A 1 230 GLY 230 230 230 GLY GLY A . n A 1 231 PHE 231 231 231 PHE PHE A . n A 1 232 ASP 232 232 232 ASP ASP A . n A 1 233 LEU 233 233 233 LEU LEU A . n A 1 234 THR 234 234 234 THR THR A . n A 1 235 PHE 235 235 235 PHE PHE A . n A 1 236 ILE 236 236 236 ILE ILE A . n A 1 237 THR 237 237 237 THR THR A . n A 1 238 TRP 238 238 238 TRP TRP A . n A 1 239 GLY 239 239 239 GLY GLY A . n A 1 240 ASN 240 240 240 ASN ASN A . n A 1 241 ASN 241 241 241 ASN ASN A . n A 1 242 ALA 242 242 242 ALA ALA A . n A 1 243 VAL 243 243 243 VAL VAL A . n A 1 244 TYR 244 244 244 TYR TYR A . n A 1 245 ASP 245 245 245 ASP ASP A . n A 1 246 LEU 246 246 246 LEU LEU A . n A 1 247 THR 247 247 247 THR THR A . n A 1 248 PHE 248 248 248 PHE PHE A . n A 1 249 ASP 249 249 249 ASP ASP A . n A 1 250 TYR 250 250 250 TYR TYR A . n A 1 251 VAL 251 251 251 VAL VAL A . n A 1 252 ALA 252 252 252 ALA ALA A . n A 1 253 VAL 253 253 253 VAL VAL A . n A 1 254 GLU 254 254 254 GLU GLU A . n A 1 255 PHE 255 255 255 PHE PHE A . n A 1 256 ASN 256 256 256 ASN ASN A . n A 1 257 ASN 257 257 257 ASN ASN A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CL 1 498 498 CL CL A . C 2 CL 1 499 499 CL CL A . D 3 CA 1 500 500 CA CA A . E 4 A2G 1 501 501 A2G A2G A . F 5 NGA 1 505 505 NGA NGA A . G 6 1PG 1 502 502 1PG 1PG A . H 6 1PG 1 503 503 1PG 1PG A . I 7 EDO 1 504 504 EDO EDO A . J 8 HOH 1 2001 2001 HOH HOH A . J 8 HOH 2 2002 2002 HOH HOH A . J 8 HOH 3 2003 2003 HOH HOH A . J 8 HOH 4 2004 2004 HOH HOH A . J 8 HOH 5 2005 2005 HOH HOH A . J 8 HOH 6 2006 2006 HOH HOH A . J 8 HOH 7 2007 2007 HOH HOH A . J 8 HOH 8 2008 2008 HOH HOH A . J 8 HOH 9 2009 2009 HOH HOH A . J 8 HOH 10 2010 2010 HOH HOH A . J 8 HOH 11 2011 2011 HOH HOH A . J 8 HOH 12 2012 2012 HOH HOH A . J 8 HOH 13 2013 2013 HOH HOH A . J 8 HOH 14 2014 2014 HOH HOH A . J 8 HOH 15 2015 2015 HOH HOH A . J 8 HOH 16 2016 2016 HOH HOH A . J 8 HOH 17 2017 2017 HOH HOH A . J 8 HOH 18 2018 2018 HOH HOH A . J 8 HOH 19 2019 2019 HOH HOH A . J 8 HOH 20 2020 2020 HOH HOH A . J 8 HOH 21 2021 2021 HOH HOH A . J 8 HOH 22 2022 2022 HOH HOH A . J 8 HOH 23 2023 2023 HOH HOH A . J 8 HOH 24 2024 2024 HOH HOH A . J 8 HOH 25 2025 2025 HOH HOH A . J 8 HOH 26 2026 2026 HOH HOH A . J 8 HOH 27 2027 2027 HOH HOH A . J 8 HOH 28 2028 2028 HOH HOH A . J 8 HOH 29 2029 2029 HOH HOH A . J 8 HOH 30 2030 2030 HOH HOH A . J 8 HOH 31 2031 2031 HOH HOH A . J 8 HOH 32 2032 2032 HOH HOH A . J 8 HOH 33 2033 2033 HOH HOH A . J 8 HOH 34 2034 2034 HOH HOH A . J 8 HOH 35 2035 2035 HOH HOH A . J 8 HOH 36 2036 2036 HOH HOH A . J 8 HOH 37 2037 2037 HOH HOH A . J 8 HOH 38 2038 2038 HOH HOH A . J 8 HOH 39 2039 2039 HOH HOH A . J 8 HOH 40 2040 2040 HOH HOH A . J 8 HOH 41 2041 2041 HOH HOH A . J 8 HOH 42 2042 2042 HOH HOH A . J 8 HOH 43 2043 2043 HOH HOH A . J 8 HOH 44 2044 2044 HOH HOH A . J 8 HOH 45 2045 2045 HOH HOH A . J 8 HOH 46 2046 2046 HOH HOH A . J 8 HOH 47 2047 2047 HOH HOH A . J 8 HOH 48 2048 2048 HOH HOH A . J 8 HOH 49 2049 2049 HOH HOH A . J 8 HOH 50 2050 2050 HOH HOH A . J 8 HOH 51 2051 2051 HOH HOH A . J 8 HOH 52 2052 2052 HOH HOH A . J 8 HOH 53 2053 2053 HOH HOH A . J 8 HOH 54 2054 2054 HOH HOH A . J 8 HOH 55 2055 2055 HOH HOH A . J 8 HOH 56 2056 2056 HOH HOH A . J 8 HOH 57 2057 2057 HOH HOH A . J 8 HOH 58 2058 2058 HOH HOH A . J 8 HOH 59 2059 2059 HOH HOH A . J 8 HOH 60 2060 2060 HOH HOH A . J 8 HOH 61 2061 2061 HOH HOH A . J 8 HOH 62 2062 2062 HOH HOH A . J 8 HOH 63 2063 2063 HOH HOH A . J 8 HOH 64 2064 2064 HOH HOH A . J 8 HOH 65 2065 2065 HOH HOH A . J 8 HOH 66 2066 2066 HOH HOH A . J 8 HOH 67 2067 2067 HOH HOH A . J 8 HOH 68 2068 2068 HOH HOH A . J 8 HOH 69 2069 2069 HOH HOH A . J 8 HOH 70 2070 2070 HOH HOH A . J 8 HOH 71 2071 2071 HOH HOH A . J 8 HOH 72 2072 2072 HOH HOH A . J 8 HOH 73 2073 2073 HOH HOH A . J 8 HOH 74 2074 2074 HOH HOH A . J 8 HOH 75 2075 2075 HOH HOH A . J 8 HOH 76 2076 2076 HOH HOH A . J 8 HOH 77 2077 2077 HOH HOH A . J 8 HOH 78 2078 2078 HOH HOH A . J 8 HOH 79 2079 2079 HOH HOH A . J 8 HOH 80 2080 2080 HOH HOH A . J 8 HOH 81 2081 2081 HOH HOH A . J 8 HOH 82 2082 2082 HOH HOH A . J 8 HOH 83 2083 2083 HOH HOH A . J 8 HOH 84 2084 2084 HOH HOH A . J 8 HOH 85 2085 2085 HOH HOH A . J 8 HOH 86 2086 2086 HOH HOH A . J 8 HOH 87 2087 2087 HOH HOH A . J 8 HOH 88 2088 2088 HOH HOH A . J 8 HOH 89 2089 2089 HOH HOH A . J 8 HOH 90 2090 2090 HOH HOH A . J 8 HOH 91 2091 2091 HOH HOH A . J 8 HOH 92 2092 2092 HOH HOH A . J 8 HOH 93 2093 2093 HOH HOH A . J 8 HOH 94 2094 2094 HOH HOH A . J 8 HOH 95 2095 2095 HOH HOH A . J 8 HOH 96 2096 2096 HOH HOH A . J 8 HOH 97 2097 2097 HOH HOH A . J 8 HOH 98 2098 2098 HOH HOH A . J 8 HOH 99 2099 2099 HOH HOH A . J 8 HOH 100 2100 2100 HOH HOH A . J 8 HOH 101 2101 2101 HOH HOH A . J 8 HOH 102 2102 2102 HOH HOH A . J 8 HOH 103 2103 2103 HOH HOH A . J 8 HOH 104 2104 2104 HOH HOH A . J 8 HOH 105 2105 2105 HOH HOH A . J 8 HOH 106 2106 2106 HOH HOH A . J 8 HOH 107 2107 2107 HOH HOH A . J 8 HOH 108 2108 2108 HOH HOH A . J 8 HOH 109 2109 2109 HOH HOH A . J 8 HOH 110 2110 2110 HOH HOH A . J 8 HOH 111 2111 2111 HOH HOH A . J 8 HOH 112 2112 2112 HOH HOH A . J 8 HOH 113 2113 2113 HOH HOH A . J 8 HOH 114 2114 2114 HOH HOH A . J 8 HOH 115 2115 2115 HOH HOH A . J 8 HOH 116 2116 2116 HOH HOH A . J 8 HOH 117 2117 2117 HOH HOH A . J 8 HOH 118 2118 2118 HOH HOH A . J 8 HOH 119 2119 2119 HOH HOH A . J 8 HOH 120 2120 2120 HOH HOH A . J 8 HOH 121 2121 2121 HOH HOH A . J 8 HOH 122 2122 2122 HOH HOH A . J 8 HOH 123 2123 2123 HOH HOH A . J 8 HOH 124 2124 2124 HOH HOH A . J 8 HOH 125 2125 2125 HOH HOH A . J 8 HOH 126 2126 2126 HOH HOH A . J 8 HOH 127 2127 2127 HOH HOH A . J 8 HOH 128 2128 2128 HOH HOH A . J 8 HOH 129 2129 2129 HOH HOH A . J 8 HOH 130 2130 2130 HOH HOH A . J 8 HOH 131 2131 2131 HOH HOH A . J 8 HOH 132 2132 2132 HOH HOH A . J 8 HOH 133 2133 2133 HOH HOH A . J 8 HOH 134 2134 2134 HOH HOH A . J 8 HOH 135 2135 2135 HOH HOH A . J 8 HOH 136 2136 2136 HOH HOH A . J 8 HOH 137 2137 2137 HOH HOH A . J 8 HOH 138 2138 2138 HOH HOH A . J 8 HOH 139 2139 2139 HOH HOH A . J 8 HOH 140 2140 2140 HOH HOH A . J 8 HOH 141 2141 2141 HOH HOH A . J 8 HOH 142 2142 2142 HOH HOH A . J 8 HOH 143 2143 2143 HOH HOH A . J 8 HOH 144 2144 2144 HOH HOH A . J 8 HOH 145 2145 2145 HOH HOH A . J 8 HOH 146 2146 2146 HOH HOH A . J 8 HOH 147 2147 2147 HOH HOH A . J 8 HOH 148 2148 2148 HOH HOH A . J 8 HOH 149 2149 2149 HOH HOH A . J 8 HOH 150 2150 2150 HOH HOH A . J 8 HOH 151 2151 2151 HOH HOH A . J 8 HOH 152 2152 2152 HOH HOH A . J 8 HOH 153 2153 2153 HOH HOH A . J 8 HOH 154 2154 2154 HOH HOH A . J 8 HOH 155 2155 2155 HOH HOH A . J 8 HOH 156 2156 2156 HOH HOH A . J 8 HOH 157 2157 2157 HOH HOH A . J 8 HOH 158 2158 2158 HOH HOH A . J 8 HOH 159 2159 2159 HOH HOH A . J 8 HOH 160 2160 2160 HOH HOH A . J 8 HOH 161 2161 2161 HOH HOH A . J 8 HOH 162 2162 2162 HOH HOH A . J 8 HOH 163 2163 2163 HOH HOH A . J 8 HOH 164 2164 2164 HOH HOH A . J 8 HOH 165 2165 2165 HOH HOH A . J 8 HOH 166 2166 2166 HOH HOH A . J 8 HOH 167 2167 2167 HOH HOH A . J 8 HOH 168 2168 2168 HOH HOH A . J 8 HOH 169 2169 2169 HOH HOH A . J 8 HOH 170 2170 2170 HOH HOH A . J 8 HOH 171 2171 2171 HOH HOH A . J 8 HOH 172 2172 2172 HOH HOH A . J 8 HOH 173 2173 2173 HOH HOH A . J 8 HOH 174 2174 2174 HOH HOH A . J 8 HOH 175 2175 2175 HOH HOH A . J 8 HOH 176 2176 2176 HOH HOH A . J 8 HOH 177 2177 2177 HOH HOH A . J 8 HOH 178 2178 2178 HOH HOH A . J 8 HOH 179 2179 2179 HOH HOH A . J 8 HOH 180 2180 2180 HOH HOH A . J 8 HOH 181 2181 2181 HOH HOH A . J 8 HOH 182 2182 2182 HOH HOH A . J 8 HOH 183 2183 2183 HOH HOH A . J 8 HOH 184 2184 2184 HOH HOH A . J 8 HOH 185 2185 2185 HOH HOH A . J 8 HOH 186 2186 2186 HOH HOH A . J 8 HOH 187 2187 2187 HOH HOH A . J 8 HOH 188 2188 2188 HOH HOH A . J 8 HOH 189 2189 2189 HOH HOH A . J 8 HOH 190 2190 2190 HOH HOH A . J 8 HOH 191 2191 2191 HOH HOH A . J 8 HOH 192 2192 2192 HOH HOH A . J 8 HOH 193 2193 2193 HOH HOH A . J 8 HOH 194 2194 2194 HOH HOH A . J 8 HOH 195 2195 2195 HOH HOH A . J 8 HOH 196 2196 2196 HOH HOH A . J 8 HOH 197 2197 2197 HOH HOH A . J 8 HOH 198 2198 2198 HOH HOH A . J 8 HOH 199 2199 2199 HOH HOH A . J 8 HOH 200 2200 2200 HOH HOH A . J 8 HOH 201 2201 2201 HOH HOH A . J 8 HOH 202 2202 2202 HOH HOH A . J 8 HOH 203 2203 2203 HOH HOH A . J 8 HOH 204 2204 2204 HOH HOH A . J 8 HOH 205 2205 2205 HOH HOH A . J 8 HOH 206 2206 2206 HOH HOH A . J 8 HOH 207 2207 2207 HOH HOH A . J 8 HOH 208 2208 2208 HOH HOH A . J 8 HOH 209 2209 2209 HOH HOH A . J 8 HOH 210 2210 2210 HOH HOH A . J 8 HOH 211 2211 2211 HOH HOH A . J 8 HOH 212 2212 2212 HOH HOH A . J 8 HOH 213 2213 2213 HOH HOH A . J 8 HOH 214 2214 2214 HOH HOH A . J 8 HOH 215 2215 2215 HOH HOH A . J 8 HOH 216 2216 2216 HOH HOH A . J 8 HOH 217 2217 2217 HOH HOH A . J 8 HOH 218 2218 2218 HOH HOH A . J 8 HOH 219 2219 2219 HOH HOH A . J 8 HOH 220 2220 2220 HOH HOH A . J 8 HOH 221 2221 2221 HOH HOH A . J 8 HOH 222 2222 2222 HOH HOH A . J 8 HOH 223 2223 2223 HOH HOH A . J 8 HOH 224 2224 2224 HOH HOH A . J 8 HOH 225 2225 2225 HOH HOH A . J 8 HOH 226 2226 2226 HOH HOH A . J 8 HOH 227 2227 2227 HOH HOH A . J 8 HOH 228 2228 2228 HOH HOH A . J 8 HOH 229 2229 2229 HOH HOH A . J 8 HOH 230 2230 2230 HOH HOH A . J 8 HOH 231 2231 2231 HOH HOH A . J 8 HOH 232 2232 2232 HOH HOH A . J 8 HOH 233 2233 2233 HOH HOH A . J 8 HOH 234 2234 2234 HOH HOH A . J 8 HOH 235 2235 2235 HOH HOH A . J 8 HOH 236 2236 2236 HOH HOH A . J 8 HOH 237 2237 2237 HOH HOH A . J 8 HOH 238 2238 2238 HOH HOH A . J 8 HOH 239 2239 2239 HOH HOH A . J 8 HOH 240 2240 2240 HOH HOH A . J 8 HOH 241 2241 2241 HOH HOH A . J 8 HOH 242 2242 2242 HOH HOH A . J 8 HOH 243 2243 2243 HOH HOH A . J 8 HOH 244 2244 2244 HOH HOH A . J 8 HOH 245 2245 2245 HOH HOH A . J 8 HOH 246 2246 2246 HOH HOH A . J 8 HOH 247 2247 2247 HOH HOH A . J 8 HOH 248 2248 2248 HOH HOH A . J 8 HOH 249 2249 2249 HOH HOH A . J 8 HOH 250 2250 2250 HOH HOH A . J 8 HOH 251 2251 2251 HOH HOH A . J 8 HOH 252 2252 2252 HOH HOH A . J 8 HOH 253 2253 2253 HOH HOH A . J 8 HOH 254 2254 2254 HOH HOH A . J 8 HOH 255 2255 2255 HOH HOH A . J 8 HOH 256 2256 2256 HOH HOH A . J 8 HOH 257 2257 2257 HOH HOH A . J 8 HOH 258 2258 2258 HOH HOH A . J 8 HOH 259 2259 2259 HOH HOH A . J 8 HOH 260 2260 2260 HOH HOH A . J 8 HOH 261 2261 2261 HOH HOH A . J 8 HOH 262 2262 2262 HOH HOH A . J 8 HOH 263 2263 2263 HOH HOH A . J 8 HOH 264 2264 2264 HOH HOH A . J 8 HOH 265 2265 2265 HOH HOH A . J 8 HOH 266 2266 2266 HOH HOH A . J 8 HOH 267 2267 2267 HOH HOH A . J 8 HOH 268 2268 2268 HOH HOH A . J 8 HOH 269 2269 2269 HOH HOH A . J 8 HOH 270 2270 2270 HOH HOH A . J 8 HOH 271 2271 2271 HOH HOH A . J 8 HOH 272 2272 2272 HOH HOH A . J 8 HOH 273 2273 2273 HOH HOH A . J 8 HOH 274 2274 2274 HOH HOH A . J 8 HOH 275 2275 2275 HOH HOH A . J 8 HOH 276 2276 2276 HOH HOH A . J 8 HOH 277 2277 2277 HOH HOH A . J 8 HOH 278 2278 2278 HOH HOH A . J 8 HOH 279 2279 2279 HOH HOH A . J 8 HOH 280 2280 2280 HOH HOH A . J 8 HOH 281 2281 2281 HOH HOH A . J 8 HOH 282 2282 2282 HOH HOH A . J 8 HOH 283 2283 2283 HOH HOH A . J 8 HOH 284 2284 2284 HOH HOH A . J 8 HOH 285 2285 2285 HOH HOH A . J 8 HOH 286 2286 2286 HOH HOH A . J 8 HOH 287 2287 2287 HOH HOH A . J 8 HOH 288 2288 2288 HOH HOH A . J 8 HOH 289 2289 2289 HOH HOH A . J 8 HOH 290 2290 2290 HOH HOH A . J 8 HOH 291 2291 2291 HOH HOH A . J 8 HOH 292 2292 2292 HOH HOH A . J 8 HOH 293 2293 2293 HOH HOH A . J 8 HOH 294 2294 2294 HOH HOH A . J 8 HOH 295 2295 2295 HOH HOH A . J 8 HOH 296 2296 2296 HOH HOH A . J 8 HOH 297 2297 2297 HOH HOH A . J 8 HOH 298 2298 2298 HOH HOH A . J 8 HOH 299 2299 2299 HOH HOH A . J 8 HOH 300 2300 2300 HOH HOH A . J 8 HOH 301 2301 2301 HOH HOH A . J 8 HOH 302 2302 2302 HOH HOH A . J 8 HOH 303 2303 2303 HOH HOH A . J 8 HOH 304 2304 2304 HOH HOH A . J 8 HOH 305 2305 2305 HOH HOH A . J 8 HOH 306 2306 2306 HOH HOH A . J 8 HOH 307 2307 2307 HOH HOH A . J 8 HOH 308 2308 2308 HOH HOH A . J 8 HOH 309 2309 2309 HOH HOH A . J 8 HOH 310 2310 2310 HOH HOH A . J 8 HOH 311 2311 2311 HOH HOH A . J 8 HOH 312 2312 2312 HOH HOH A . J 8 HOH 313 2313 2313 HOH HOH A . J 8 HOH 314 2314 2314 HOH HOH A . J 8 HOH 315 2315 2315 HOH HOH A . J 8 HOH 316 2316 2316 HOH HOH A . J 8 HOH 317 2317 2317 HOH HOH A . J 8 HOH 318 2318 2318 HOH HOH A . J 8 HOH 319 2319 2319 HOH HOH A . J 8 HOH 320 2320 2320 HOH HOH A . J 8 HOH 321 2321 2321 HOH HOH A . J 8 HOH 322 2322 2322 HOH HOH A . J 8 HOH 323 2323 2323 HOH HOH A . J 8 HOH 324 2324 2324 HOH HOH A . J 8 HOH 325 2325 2325 HOH HOH A . J 8 HOH 326 2326 2326 HOH HOH A . J 8 HOH 327 2327 2327 HOH HOH A . J 8 HOH 328 2328 2328 HOH HOH A . J 8 HOH 329 2329 2329 HOH HOH A . J 8 HOH 330 2330 2330 HOH HOH A . J 8 HOH 331 2331 2331 HOH HOH A . J 8 HOH 332 2332 2332 HOH HOH A . J 8 HOH 333 2333 2333 HOH HOH A . J 8 HOH 334 2334 2334 HOH HOH A . J 8 HOH 335 2335 2335 HOH HOH A . J 8 HOH 336 2336 2336 HOH HOH A . J 8 HOH 337 2337 2337 HOH HOH A . J 8 HOH 338 2338 2338 HOH HOH A . J 8 HOH 339 2339 2339 HOH HOH A . J 8 HOH 340 2340 2340 HOH HOH A . J 8 HOH 341 2341 2341 HOH HOH A . J 8 HOH 342 2342 2342 HOH HOH A . J 8 HOH 343 2343 2343 HOH HOH A . J 8 HOH 344 2344 2344 HOH HOH A . J 8 HOH 345 2345 2345 HOH HOH A . J 8 HOH 346 2346 2346 HOH HOH A . J 8 HOH 347 2347 2347 HOH HOH A . J 8 HOH 348 2348 2348 HOH HOH A . J 8 HOH 349 2349 2349 HOH HOH A . J 8 HOH 350 2350 2350 HOH HOH A . J 8 HOH 351 2351 2351 HOH HOH A . J 8 HOH 352 2352 2352 HOH HOH A . J 8 HOH 353 2353 2353 HOH HOH A . J 8 HOH 354 2354 2354 HOH HOH A . J 8 HOH 355 2355 2355 HOH HOH A . J 8 HOH 356 2356 2356 HOH HOH A . J 8 HOH 357 2357 2357 HOH HOH A . J 8 HOH 358 2358 2358 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 18670 ? 1 MORE -72.9 ? 1 'SSA (A^2)' 27580 ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 3_555 -x+y,-x,z -0.5000000000 0.8660254038 0.0000000000 0.0000000000 -0.8660254038 -0.5000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 3 'crystal symmetry operation' 2_555 -y,x-y,z -0.5000000000 -0.8660254038 0.0000000000 0.0000000000 0.8660254038 -0.5000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 # loop_ _pdbx_struct_special_symmetry.id _pdbx_struct_special_symmetry.PDB_model_num _pdbx_struct_special_symmetry.auth_asym_id _pdbx_struct_special_symmetry.auth_comp_id _pdbx_struct_special_symmetry.auth_seq_id _pdbx_struct_special_symmetry.PDB_ins_code _pdbx_struct_special_symmetry.label_asym_id _pdbx_struct_special_symmetry.label_comp_id _pdbx_struct_special_symmetry.label_seq_id 1 1 A CL 498 ? B CL . 2 1 A CL 499 ? C CL . 3 1 A HOH 2007 ? J HOH . 4 1 A HOH 2012 ? J HOH . 5 1 A HOH 2013 ? J HOH . 6 1 A HOH 2014 ? J HOH . 7 1 A HOH 2154 ? J HOH . 8 1 A HOH 2155 ? J HOH . 9 1 A HOH 2314 ? J HOH . 10 1 A HOH 2340 ? J HOH . # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 OD1 ? A ASN 39 ? A ASN 39 ? 1_555 CA ? D CA . ? A CA 500 ? 1_555 O ? A SER 40 ? A SER 40 ? 1_555 93.2 ? 2 OD1 ? A ASN 39 ? A ASN 39 ? 1_555 CA ? D CA . ? A CA 500 ? 1_555 OD1 ? A ASP 47 ? A ASP 47 ? 1_555 75.1 ? 3 O ? A SER 40 ? A SER 40 ? 1_555 CA ? D CA . ? A CA 500 ? 1_555 OD1 ? A ASP 47 ? A ASP 47 ? 1_555 108.4 ? 4 OD1 ? A ASN 39 ? A ASN 39 ? 1_555 CA ? D CA . ? A CA 500 ? 1_555 O ? J HOH . ? A HOH 2078 ? 1_555 147.1 ? 5 O ? A SER 40 ? A SER 40 ? 1_555 CA ? D CA . ? A CA 500 ? 1_555 O ? J HOH . ? A HOH 2078 ? 1_555 87.6 ? 6 OD1 ? A ASP 47 ? A ASP 47 ? 1_555 CA ? D CA . ? A CA 500 ? 1_555 O ? J HOH . ? A HOH 2078 ? 1_555 135.4 ? 7 OD1 ? A ASN 39 ? A ASN 39 ? 1_555 CA ? D CA . ? A CA 500 ? 1_555 O ? J HOH . ? A HOH 2082 ? 1_555 140.9 ? 8 O ? A SER 40 ? A SER 40 ? 1_555 CA ? D CA . ? A CA 500 ? 1_555 O ? J HOH . ? A HOH 2082 ? 1_555 77.3 ? 9 OD1 ? A ASP 47 ? A ASP 47 ? 1_555 CA ? D CA . ? A CA 500 ? 1_555 O ? J HOH . ? A HOH 2082 ? 1_555 72.3 ? 10 O ? J HOH . ? A HOH 2078 ? 1_555 CA ? D CA . ? A CA 500 ? 1_555 O ? J HOH . ? A HOH 2082 ? 1_555 71.3 ? 11 OD1 ? A ASN 39 ? A ASN 39 ? 1_555 CA ? D CA . ? A CA 500 ? 1_555 O ? J HOH . ? A HOH 2098 ? 1_555 95.7 ? 12 O ? A SER 40 ? A SER 40 ? 1_555 CA ? D CA . ? A CA 500 ? 1_555 O ? J HOH . ? A HOH 2098 ? 1_555 167.1 ? 13 OD1 ? A ASP 47 ? A ASP 47 ? 1_555 CA ? D CA . ? A CA 500 ? 1_555 O ? J HOH . ? A HOH 2098 ? 1_555 82.9 ? 14 O ? J HOH . ? A HOH 2078 ? 1_555 CA ? D CA . ? A CA 500 ? 1_555 O ? J HOH . ? A HOH 2098 ? 1_555 79.8 ? 15 O ? J HOH . ? A HOH 2082 ? 1_555 CA ? D CA . ? A CA 500 ? 1_555 O ? J HOH . ? A HOH 2098 ? 1_555 101.2 ? 16 OD1 ? A ASN 39 ? A ASN 39 ? 1_555 CA ? D CA . ? A CA 500 ? 1_555 O ? J HOH . ? A HOH 2099 ? 1_555 73.7 ? 17 O ? A SER 40 ? A SER 40 ? 1_555 CA ? D CA . ? A CA 500 ? 1_555 O ? J HOH . ? A HOH 2099 ? 1_555 86.4 ? 18 OD1 ? A ASP 47 ? A ASP 47 ? 1_555 CA ? D CA . ? A CA 500 ? 1_555 O ? J HOH . ? A HOH 2099 ? 1_555 146.1 ? 19 O ? J HOH . ? A HOH 2078 ? 1_555 CA ? D CA . ? A CA 500 ? 1_555 O ? J HOH . ? A HOH 2099 ? 1_555 73.5 ? 20 O ? J HOH . ? A HOH 2082 ? 1_555 CA ? D CA . ? A CA 500 ? 1_555 O ? J HOH . ? A HOH 2099 ? 1_555 141.5 ? 21 O ? J HOH . ? A HOH 2098 ? 1_555 CA ? D CA . ? A CA 500 ? 1_555 O ? J HOH . ? A HOH 2099 ? 1_555 87.2 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2008-07-01 2 'Structure model' 1 1 2011-06-02 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 2 0 2020-07-29 5 'Structure model' 2 1 2023-12-13 # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description _pdbx_audit_revision_details.details 1 1 'Structure model' repository 'Initial release' ? ? 2 4 'Structure model' repository Remediation 'Carbohydrate remediation' ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Atomic model' 4 4 'Structure model' 'Data collection' 5 4 'Structure model' 'Derived calculations' 6 4 'Structure model' Other 7 4 'Structure model' 'Structure summary' 8 5 'Structure model' 'Data collection' 9 5 'Structure model' 'Database references' 10 5 'Structure model' 'Refinement description' 11 5 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' atom_site 2 4 'Structure model' chem_comp 3 4 'Structure model' entity 4 4 'Structure model' pdbx_chem_comp_identifier 5 4 'Structure model' pdbx_database_status 6 4 'Structure model' pdbx_entity_nonpoly 7 4 'Structure model' pdbx_nonpoly_scheme 8 4 'Structure model' pdbx_struct_conn_angle 9 4 'Structure model' struct_conn 10 4 'Structure model' struct_site 11 4 'Structure model' struct_site_gen 12 5 'Structure model' chem_comp 13 5 'Structure model' chem_comp_atom 14 5 'Structure model' chem_comp_bond 15 5 'Structure model' database_2 16 5 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_atom_site.auth_atom_id' 2 4 'Structure model' '_atom_site.label_atom_id' 3 4 'Structure model' '_chem_comp.name' 4 4 'Structure model' '_chem_comp.type' 5 4 'Structure model' '_entity.pdbx_description' 6 4 'Structure model' '_pdbx_database_status.status_code_sf' 7 4 'Structure model' '_pdbx_entity_nonpoly.name' 8 4 'Structure model' '_pdbx_nonpoly_scheme.ndb_seq_num' 9 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 10 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 11 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 12 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 13 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 14 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 15 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 16 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 17 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 18 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 19 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 20 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 21 4 'Structure model' '_pdbx_struct_conn_angle.value' 22 4 'Structure model' '_struct_conn.pdbx_dist_value' 23 4 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 24 4 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 25 4 'Structure model' '_struct_conn.ptnr1_label_asym_id' 26 4 'Structure model' '_struct_conn.ptnr1_label_atom_id' 27 4 'Structure model' '_struct_conn.ptnr1_label_comp_id' 28 4 'Structure model' '_struct_conn.ptnr1_label_seq_id' 29 4 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 30 4 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 31 4 'Structure model' '_struct_conn.ptnr2_label_asym_id' 32 4 'Structure model' '_struct_conn.ptnr2_label_atom_id' 33 4 'Structure model' '_struct_conn.ptnr2_label_comp_id' 34 4 'Structure model' '_struct_conn.ptnr2_label_seq_id' 35 5 'Structure model' '_chem_comp.pdbx_synonyms' 36 5 'Structure model' '_database_2.pdbx_DOI' 37 5 'Structure model' '_database_2.pdbx_database_accession' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal REFMAC refinement 5.2.0019 ? 1 XDS 'data reduction' . ? 2 SCALA 'data scaling' . ? 3 AMoRE phasing . ? 4 # loop_ _pdbx_database_remark.id _pdbx_database_remark.text 650 ; HELIX DETERMINATION METHOD: AUTHOR PROVIDED. ; 700 ; SHEET DETERMINATION METHOD: AUTHOR PROVIDED. ; # _pdbx_entry_details.entry_id 2VMC _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details '2-(2-{2-[2-(2-METHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHANOL (1PG)' _pdbx_entry_details.sequence_details ? _pdbx_entry_details.has_ligand_of_interest ? # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASN A 39 ? ? -126.29 -156.63 2 1 SER A 51 ? ? 175.11 157.58 3 1 VAL A 100 ? ? -125.47 -53.28 4 1 ALA A 113 ? ? -119.46 -123.57 5 1 ASN A 143 ? ? 74.79 -48.63 6 1 ASN A 256 ? ? 58.30 19.24 # _pdbx_validate_peptide_omega.id 1 _pdbx_validate_peptide_omega.PDB_model_num 1 _pdbx_validate_peptide_omega.auth_comp_id_1 SER _pdbx_validate_peptide_omega.auth_asym_id_1 A _pdbx_validate_peptide_omega.auth_seq_id_1 51 _pdbx_validate_peptide_omega.PDB_ins_code_1 ? _pdbx_validate_peptide_omega.label_alt_id_1 ? _pdbx_validate_peptide_omega.auth_comp_id_2 TRP _pdbx_validate_peptide_omega.auth_asym_id_2 A _pdbx_validate_peptide_omega.auth_seq_id_2 52 _pdbx_validate_peptide_omega.PDB_ins_code_2 ? _pdbx_validate_peptide_omega.label_alt_id_2 ? _pdbx_validate_peptide_omega.omega 146.97 # loop_ _pdbx_distant_solvent_atoms.id _pdbx_distant_solvent_atoms.PDB_model_num _pdbx_distant_solvent_atoms.auth_atom_id _pdbx_distant_solvent_atoms.label_alt_id _pdbx_distant_solvent_atoms.auth_asym_id _pdbx_distant_solvent_atoms.auth_comp_id _pdbx_distant_solvent_atoms.auth_seq_id _pdbx_distant_solvent_atoms.PDB_ins_code _pdbx_distant_solvent_atoms.neighbor_macromolecule_distance _pdbx_distant_solvent_atoms.neighbor_ligand_distance 1 1 O ? A HOH 2007 ? 5.94 . 2 1 O ? A HOH 2051 ? 5.82 . 3 1 O ? A HOH 2058 ? 6.26 . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 N 1 A 1PG 502 ? C1 ? G 1PG 1 C1 2 1 N 1 A 1PG 502 ? C9 ? G 1PG 1 C9 3 1 N 1 A 1PG 502 ? O5 ? G 1PG 1 O5 4 1 N 1 A 1PG 502 ? C10 ? G 1PG 1 C10 5 1 N 1 A 1PG 502 ? C11 ? G 1PG 1 C11 6 1 N 1 A 1PG 502 ? O6 ? G 1PG 1 O6 7 1 N 1 A 1PG 503 ? O6 ? H 1PG 1 O6 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET 1 ? A MET 1 2 1 Y 1 A SER 2 ? A SER 2 3 1 Y 1 A VAL 3 ? A VAL 3 4 1 Y 1 A PRO 4 ? A PRO 4 5 1 Y 1 A ALA 5 ? A ALA 5 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal 1PG C2 C N N 1 1PG C1 C N N 2 1PG O1 O N N 3 1PG O2 O N N 4 1PG C3 C N N 5 1PG C4 C N N 6 1PG C5 C N N 7 1PG O3 O N N 8 1PG C6 C N N 9 1PG C7 C N N 10 1PG O4 O N N 11 1PG C8 C N N 12 1PG C9 C N N 13 1PG O5 O N N 14 1PG C10 C N N 15 1PG C11 C N N 16 1PG O6 O N N 17 1PG H21 H N N 18 1PG H22 H N N 19 1PG H11 H N N 20 1PG H12 H N N 21 1PG H13 H N N 22 1PG H31 H N N 23 1PG H32 H N N 24 1PG H41 H N N 25 1PG H42 H N N 26 1PG H51 H N N 27 1PG H52 H N N 28 1PG H61 H N N 29 1PG H62 H N N 30 1PG H71 H N N 31 1PG H72 H N N 32 1PG H81 H N N 33 1PG H82 H N N 34 1PG H91 H N N 35 1PG H92 H N N 36 1PG H101 H N N 37 1PG H102 H N N 38 1PG H111 H N N 39 1PG H112 H N N 40 1PG HO6 H N N 41 A2G O5 O N N 42 A2G C1 C N S 43 A2G O1 O N N 44 A2G C2 C N R 45 A2G N2 N N N 46 A2G C3 C N R 47 A2G O3 O N N 48 A2G C4 C N R 49 A2G O4 O N N 50 A2G C5 C N R 51 A2G C6 C N N 52 A2G O6 O N N 53 A2G C7 C N N 54 A2G O7 O N N 55 A2G C8 C N N 56 A2G H1 H N N 57 A2G HO1 H N N 58 A2G H2 H N N 59 A2G HN2 H N N 60 A2G H3 H N N 61 A2G HO3 H N N 62 A2G H4 H N N 63 A2G HO4 H N N 64 A2G H5 H N N 65 A2G H61 H N N 66 A2G H81 H N N 67 A2G H82 H N N 68 A2G H83 H N N 69 A2G H62 H N N 70 A2G HO6 H N N 71 ALA N N N N 72 ALA CA C N S 73 ALA C C N N 74 ALA O O N N 75 ALA CB C N N 76 ALA OXT O N N 77 ALA H H N N 78 ALA H2 H N N 79 ALA HA H N N 80 ALA HB1 H N N 81 ALA HB2 H N N 82 ALA HB3 H N N 83 ALA HXT H N N 84 ARG N N N N 85 ARG CA C N S 86 ARG C C N N 87 ARG O O N N 88 ARG CB C N N 89 ARG CG C N N 90 ARG CD C N N 91 ARG NE N N N 92 ARG CZ C N N 93 ARG NH1 N N N 94 ARG NH2 N N N 95 ARG OXT O N N 96 ARG H H N N 97 ARG H2 H N N 98 ARG HA H N N 99 ARG HB2 H N N 100 ARG HB3 H N N 101 ARG HG2 H N N 102 ARG HG3 H N N 103 ARG HD2 H N N 104 ARG HD3 H N N 105 ARG HE H N N 106 ARG HH11 H N N 107 ARG HH12 H N N 108 ARG HH21 H N N 109 ARG HH22 H N N 110 ARG HXT H N N 111 ASN N N N N 112 ASN CA C N S 113 ASN C C N N 114 ASN O O N N 115 ASN CB C N N 116 ASN CG C N N 117 ASN OD1 O N N 118 ASN ND2 N N N 119 ASN OXT O N N 120 ASN H H N N 121 ASN H2 H N N 122 ASN HA H N N 123 ASN HB2 H N N 124 ASN HB3 H N N 125 ASN HD21 H N N 126 ASN HD22 H N N 127 ASN HXT H N N 128 ASP N N N N 129 ASP CA C N S 130 ASP C C N N 131 ASP O O N N 132 ASP CB C N N 133 ASP CG C N N 134 ASP OD1 O N N 135 ASP OD2 O N N 136 ASP OXT O N N 137 ASP H H N N 138 ASP H2 H N N 139 ASP HA H N N 140 ASP HB2 H N N 141 ASP HB3 H N N 142 ASP HD2 H N N 143 ASP HXT H N N 144 CA CA CA N N 145 CL CL CL N N 146 CYS N N N N 147 CYS CA C N R 148 CYS C C N N 149 CYS O O N N 150 CYS CB C N N 151 CYS SG S N N 152 CYS OXT O N N 153 CYS H H N N 154 CYS H2 H N N 155 CYS HA H N N 156 CYS HB2 H N N 157 CYS HB3 H N N 158 CYS HG H N N 159 CYS HXT H N N 160 EDO C1 C N N 161 EDO O1 O N N 162 EDO C2 C N N 163 EDO O2 O N N 164 EDO H11 H N N 165 EDO H12 H N N 166 EDO HO1 H N N 167 EDO H21 H N N 168 EDO H22 H N N 169 EDO HO2 H N N 170 GLN N N N N 171 GLN CA C N S 172 GLN C C N N 173 GLN O O N N 174 GLN CB C N N 175 GLN CG C N N 176 GLN CD C N N 177 GLN OE1 O N N 178 GLN NE2 N N N 179 GLN OXT O N N 180 GLN H H N N 181 GLN H2 H N N 182 GLN HA H N N 183 GLN HB2 H N N 184 GLN HB3 H N N 185 GLN HG2 H N N 186 GLN HG3 H N N 187 GLN HE21 H N N 188 GLN HE22 H N N 189 GLN HXT H N N 190 GLU N N N N 191 GLU CA C N S 192 GLU C C N N 193 GLU O O N N 194 GLU CB C N N 195 GLU CG C N N 196 GLU CD C N N 197 GLU OE1 O N N 198 GLU OE2 O N N 199 GLU OXT O N N 200 GLU H H N N 201 GLU H2 H N N 202 GLU HA H N N 203 GLU HB2 H N N 204 GLU HB3 H N N 205 GLU HG2 H N N 206 GLU HG3 H N N 207 GLU HE2 H N N 208 GLU HXT H N N 209 GLY N N N N 210 GLY CA C N N 211 GLY C C N N 212 GLY O O N N 213 GLY OXT O N N 214 GLY H H N N 215 GLY H2 H N N 216 GLY HA2 H N N 217 GLY HA3 H N N 218 GLY HXT H N N 219 HIS N N N N 220 HIS CA C N S 221 HIS C C N N 222 HIS O O N N 223 HIS CB C N N 224 HIS CG C Y N 225 HIS ND1 N Y N 226 HIS CD2 C Y N 227 HIS CE1 C Y N 228 HIS NE2 N Y N 229 HIS OXT O N N 230 HIS H H N N 231 HIS H2 H N N 232 HIS HA H N N 233 HIS HB2 H N N 234 HIS HB3 H N N 235 HIS HD1 H N N 236 HIS HD2 H N N 237 HIS HE1 H N N 238 HIS HE2 H N N 239 HIS HXT H N N 240 HOH O O N N 241 HOH H1 H N N 242 HOH H2 H N N 243 ILE N N N N 244 ILE CA C N S 245 ILE C C N N 246 ILE O O N N 247 ILE CB C N S 248 ILE CG1 C N N 249 ILE CG2 C N N 250 ILE CD1 C N N 251 ILE OXT O N N 252 ILE H H N N 253 ILE H2 H N N 254 ILE HA H N N 255 ILE HB H N N 256 ILE HG12 H N N 257 ILE HG13 H N N 258 ILE HG21 H N N 259 ILE HG22 H N N 260 ILE HG23 H N N 261 ILE HD11 H N N 262 ILE HD12 H N N 263 ILE HD13 H N N 264 ILE HXT H N N 265 LEU N N N N 266 LEU CA C N S 267 LEU C C N N 268 LEU O O N N 269 LEU CB C N N 270 LEU CG C N N 271 LEU CD1 C N N 272 LEU CD2 C N N 273 LEU OXT O N N 274 LEU H H N N 275 LEU H2 H N N 276 LEU HA H N N 277 LEU HB2 H N N 278 LEU HB3 H N N 279 LEU HG H N N 280 LEU HD11 H N N 281 LEU HD12 H N N 282 LEU HD13 H N N 283 LEU HD21 H N N 284 LEU HD22 H N N 285 LEU HD23 H N N 286 LEU HXT H N N 287 LYS N N N N 288 LYS CA C N S 289 LYS C C N N 290 LYS O O N N 291 LYS CB C N N 292 LYS CG C N N 293 LYS CD C N N 294 LYS CE C N N 295 LYS NZ N N N 296 LYS OXT O N N 297 LYS H H N N 298 LYS H2 H N N 299 LYS HA H N N 300 LYS HB2 H N N 301 LYS HB3 H N N 302 LYS HG2 H N N 303 LYS HG3 H N N 304 LYS HD2 H N N 305 LYS HD3 H N N 306 LYS HE2 H N N 307 LYS HE3 H N N 308 LYS HZ1 H N N 309 LYS HZ2 H N N 310 LYS HZ3 H N N 311 LYS HXT H N N 312 MET N N N N 313 MET CA C N S 314 MET C C N N 315 MET O O N N 316 MET CB C N N 317 MET CG C N N 318 MET SD S N N 319 MET CE C N N 320 MET OXT O N N 321 MET H H N N 322 MET H2 H N N 323 MET HA H N N 324 MET HB2 H N N 325 MET HB3 H N N 326 MET HG2 H N N 327 MET HG3 H N N 328 MET HE1 H N N 329 MET HE2 H N N 330 MET HE3 H N N 331 MET HXT H N N 332 NGA C1 C N R 333 NGA C2 C N R 334 NGA C3 C N R 335 NGA C4 C N R 336 NGA C5 C N R 337 NGA C6 C N N 338 NGA C7 C N N 339 NGA C8 C N N 340 NGA N2 N N N 341 NGA O1 O N N 342 NGA O3 O N N 343 NGA O4 O N N 344 NGA O5 O N N 345 NGA O6 O N N 346 NGA O7 O N N 347 NGA H1 H N N 348 NGA H2 H N N 349 NGA H3 H N N 350 NGA H4 H N N 351 NGA H5 H N N 352 NGA H61 H N N 353 NGA H62 H N N 354 NGA H81 H N N 355 NGA H82 H N N 356 NGA H83 H N N 357 NGA HN2 H N N 358 NGA HO1 H N N 359 NGA HO3 H N N 360 NGA HO4 H N N 361 NGA HO6 H N N 362 PHE N N N N 363 PHE CA C N S 364 PHE C C N N 365 PHE O O N N 366 PHE CB C N N 367 PHE CG C Y N 368 PHE CD1 C Y N 369 PHE CD2 C Y N 370 PHE CE1 C Y N 371 PHE CE2 C Y N 372 PHE CZ C Y N 373 PHE OXT O N N 374 PHE H H N N 375 PHE H2 H N N 376 PHE HA H N N 377 PHE HB2 H N N 378 PHE HB3 H N N 379 PHE HD1 H N N 380 PHE HD2 H N N 381 PHE HE1 H N N 382 PHE HE2 H N N 383 PHE HZ H N N 384 PHE HXT H N N 385 PRO N N N N 386 PRO CA C N S 387 PRO C C N N 388 PRO O O N N 389 PRO CB C N N 390 PRO CG C N N 391 PRO CD C N N 392 PRO OXT O N N 393 PRO H H N N 394 PRO HA H N N 395 PRO HB2 H N N 396 PRO HB3 H N N 397 PRO HG2 H N N 398 PRO HG3 H N N 399 PRO HD2 H N N 400 PRO HD3 H N N 401 PRO HXT H N N 402 SER N N N N 403 SER CA C N S 404 SER C C N N 405 SER O O N N 406 SER CB C N N 407 SER OG O N N 408 SER OXT O N N 409 SER H H N N 410 SER H2 H N N 411 SER HA H N N 412 SER HB2 H N N 413 SER HB3 H N N 414 SER HG H N N 415 SER HXT H N N 416 THR N N N N 417 THR CA C N S 418 THR C C N N 419 THR O O N N 420 THR CB C N R 421 THR OG1 O N N 422 THR CG2 C N N 423 THR OXT O N N 424 THR H H N N 425 THR H2 H N N 426 THR HA H N N 427 THR HB H N N 428 THR HG1 H N N 429 THR HG21 H N N 430 THR HG22 H N N 431 THR HG23 H N N 432 THR HXT H N N 433 TRP N N N N 434 TRP CA C N S 435 TRP C C N N 436 TRP O O N N 437 TRP CB C N N 438 TRP CG C Y N 439 TRP CD1 C Y N 440 TRP CD2 C Y N 441 TRP NE1 N Y N 442 TRP CE2 C Y N 443 TRP CE3 C Y N 444 TRP CZ2 C Y N 445 TRP CZ3 C Y N 446 TRP CH2 C Y N 447 TRP OXT O N N 448 TRP H H N N 449 TRP H2 H N N 450 TRP HA H N N 451 TRP HB2 H N N 452 TRP HB3 H N N 453 TRP HD1 H N N 454 TRP HE1 H N N 455 TRP HE3 H N N 456 TRP HZ2 H N N 457 TRP HZ3 H N N 458 TRP HH2 H N N 459 TRP HXT H N N 460 TYR N N N N 461 TYR CA C N S 462 TYR C C N N 463 TYR O O N N 464 TYR CB C N N 465 TYR CG C Y N 466 TYR CD1 C Y N 467 TYR CD2 C Y N 468 TYR CE1 C Y N 469 TYR CE2 C Y N 470 TYR CZ C Y N 471 TYR OH O N N 472 TYR OXT O N N 473 TYR H H N N 474 TYR H2 H N N 475 TYR HA H N N 476 TYR HB2 H N N 477 TYR HB3 H N N 478 TYR HD1 H N N 479 TYR HD2 H N N 480 TYR HE1 H N N 481 TYR HE2 H N N 482 TYR HH H N N 483 TYR HXT H N N 484 VAL N N N N 485 VAL CA C N S 486 VAL C C N N 487 VAL O O N N 488 VAL CB C N N 489 VAL CG1 C N N 490 VAL CG2 C N N 491 VAL OXT O N N 492 VAL H H N N 493 VAL H2 H N N 494 VAL HA H N N 495 VAL HB H N N 496 VAL HG11 H N N 497 VAL HG12 H N N 498 VAL HG13 H N N 499 VAL HG21 H N N 500 VAL HG22 H N N 501 VAL HG23 H N N 502 VAL HXT H N N 503 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 1PG C2 O1 sing N N 1 1PG C2 C3 sing N N 2 1PG C2 H21 sing N N 3 1PG C2 H22 sing N N 4 1PG C1 O1 sing N N 5 1PG C1 H11 sing N N 6 1PG C1 H12 sing N N 7 1PG C1 H13 sing N N 8 1PG O2 C3 sing N N 9 1PG O2 C4 sing N N 10 1PG C3 H31 sing N N 11 1PG C3 H32 sing N N 12 1PG C4 C5 sing N N 13 1PG C4 H41 sing N N 14 1PG C4 H42 sing N N 15 1PG C5 O3 sing N N 16 1PG C5 H51 sing N N 17 1PG C5 H52 sing N N 18 1PG O3 C6 sing N N 19 1PG C6 C7 sing N N 20 1PG C6 H61 sing N N 21 1PG C6 H62 sing N N 22 1PG C7 O4 sing N N 23 1PG C7 H71 sing N N 24 1PG C7 H72 sing N N 25 1PG O4 C8 sing N N 26 1PG C8 C9 sing N N 27 1PG C8 H81 sing N N 28 1PG C8 H82 sing N N 29 1PG C9 O5 sing N N 30 1PG C9 H91 sing N N 31 1PG C9 H92 sing N N 32 1PG O5 C10 sing N N 33 1PG C10 C11 sing N N 34 1PG C10 H101 sing N N 35 1PG C10 H102 sing N N 36 1PG C11 O6 sing N N 37 1PG C11 H111 sing N N 38 1PG C11 H112 sing N N 39 1PG O6 HO6 sing N N 40 A2G O5 C5 sing N N 41 A2G C1 O5 sing N N 42 A2G C1 C2 sing N N 43 A2G C1 H1 sing N N 44 A2G O1 C1 sing N N 45 A2G O1 HO1 sing N N 46 A2G C2 C3 sing N N 47 A2G C2 H2 sing N N 48 A2G N2 C2 sing N N 49 A2G N2 HN2 sing N N 50 A2G C3 C4 sing N N 51 A2G C3 O3 sing N N 52 A2G C3 H3 sing N N 53 A2G O3 HO3 sing N N 54 A2G C4 O4 sing N N 55 A2G C4 H4 sing N N 56 A2G O4 HO4 sing N N 57 A2G C5 C4 sing N N 58 A2G C5 C6 sing N N 59 A2G C5 H5 sing N N 60 A2G C6 O6 sing N N 61 A2G C6 H61 sing N N 62 A2G C7 N2 sing N N 63 A2G O7 C7 doub N N 64 A2G C8 C7 sing N N 65 A2G C8 H81 sing N N 66 A2G C8 H82 sing N N 67 A2G C8 H83 sing N N 68 A2G C6 H62 sing N N 69 A2G O6 HO6 sing N N 70 ALA N CA sing N N 71 ALA N H sing N N 72 ALA N H2 sing N N 73 ALA CA C sing N N 74 ALA CA CB sing N N 75 ALA CA HA sing N N 76 ALA C O doub N N 77 ALA C OXT sing N N 78 ALA CB HB1 sing N N 79 ALA CB HB2 sing N N 80 ALA CB HB3 sing N N 81 ALA OXT HXT sing N N 82 ARG N CA sing N N 83 ARG N H sing N N 84 ARG N H2 sing N N 85 ARG CA C sing N N 86 ARG CA CB sing N N 87 ARG CA HA sing N N 88 ARG C O doub N N 89 ARG C OXT sing N N 90 ARG CB CG sing N N 91 ARG CB HB2 sing N N 92 ARG CB HB3 sing N N 93 ARG CG CD sing N N 94 ARG CG HG2 sing N N 95 ARG CG HG3 sing N N 96 ARG CD NE sing N N 97 ARG CD HD2 sing N N 98 ARG CD HD3 sing N N 99 ARG NE CZ sing N N 100 ARG NE HE sing N N 101 ARG CZ NH1 sing N N 102 ARG CZ NH2 doub N N 103 ARG NH1 HH11 sing N N 104 ARG NH1 HH12 sing N N 105 ARG NH2 HH21 sing N N 106 ARG NH2 HH22 sing N N 107 ARG OXT HXT sing N N 108 ASN N CA sing N N 109 ASN N H sing N N 110 ASN N H2 sing N N 111 ASN CA C sing N N 112 ASN CA CB sing N N 113 ASN CA HA sing N N 114 ASN C O doub N N 115 ASN C OXT sing N N 116 ASN CB CG sing N N 117 ASN CB HB2 sing N N 118 ASN CB HB3 sing N N 119 ASN CG OD1 doub N N 120 ASN CG ND2 sing N N 121 ASN ND2 HD21 sing N N 122 ASN ND2 HD22 sing N N 123 ASN OXT HXT sing N N 124 ASP N CA sing N N 125 ASP N H sing N N 126 ASP N H2 sing N N 127 ASP CA C sing N N 128 ASP CA CB sing N N 129 ASP CA HA sing N N 130 ASP C O doub N N 131 ASP C OXT sing N N 132 ASP CB CG sing N N 133 ASP CB HB2 sing N N 134 ASP CB HB3 sing N N 135 ASP CG OD1 doub N N 136 ASP CG OD2 sing N N 137 ASP OD2 HD2 sing N N 138 ASP OXT HXT sing N N 139 CYS N CA sing N N 140 CYS N H sing N N 141 CYS N H2 sing N N 142 CYS CA C sing N N 143 CYS CA CB sing N N 144 CYS CA HA sing N N 145 CYS C O doub N N 146 CYS C OXT sing N N 147 CYS CB SG sing N N 148 CYS CB HB2 sing N N 149 CYS CB HB3 sing N N 150 CYS SG HG sing N N 151 CYS OXT HXT sing N N 152 EDO C1 O1 sing N N 153 EDO C1 C2 sing N N 154 EDO C1 H11 sing N N 155 EDO C1 H12 sing N N 156 EDO O1 HO1 sing N N 157 EDO C2 O2 sing N N 158 EDO C2 H21 sing N N 159 EDO C2 H22 sing N N 160 EDO O2 HO2 sing N N 161 GLN N CA sing N N 162 GLN N H sing N N 163 GLN N H2 sing N N 164 GLN CA C sing N N 165 GLN CA CB sing N N 166 GLN CA HA sing N N 167 GLN C O doub N N 168 GLN C OXT sing N N 169 GLN CB CG sing N N 170 GLN CB HB2 sing N N 171 GLN CB HB3 sing N N 172 GLN CG CD sing N N 173 GLN CG HG2 sing N N 174 GLN CG HG3 sing N N 175 GLN CD OE1 doub N N 176 GLN CD NE2 sing N N 177 GLN NE2 HE21 sing N N 178 GLN NE2 HE22 sing N N 179 GLN OXT HXT sing N N 180 GLU N CA sing N N 181 GLU N H sing N N 182 GLU N H2 sing N N 183 GLU CA C sing N N 184 GLU CA CB sing N N 185 GLU CA HA sing N N 186 GLU C O doub N N 187 GLU C OXT sing N N 188 GLU CB CG sing N N 189 GLU CB HB2 sing N N 190 GLU CB HB3 sing N N 191 GLU CG CD sing N N 192 GLU CG HG2 sing N N 193 GLU CG HG3 sing N N 194 GLU CD OE1 doub N N 195 GLU CD OE2 sing N N 196 GLU OE2 HE2 sing N N 197 GLU OXT HXT sing N N 198 GLY N CA sing N N 199 GLY N H sing N N 200 GLY N H2 sing N N 201 GLY CA C sing N N 202 GLY CA HA2 sing N N 203 GLY CA HA3 sing N N 204 GLY C O doub N N 205 GLY C OXT sing N N 206 GLY OXT HXT sing N N 207 HIS N CA sing N N 208 HIS N H sing N N 209 HIS N H2 sing N N 210 HIS CA C sing N N 211 HIS CA CB sing N N 212 HIS CA HA sing N N 213 HIS C O doub N N 214 HIS C OXT sing N N 215 HIS CB CG sing N N 216 HIS CB HB2 sing N N 217 HIS CB HB3 sing N N 218 HIS CG ND1 sing Y N 219 HIS CG CD2 doub Y N 220 HIS ND1 CE1 doub Y N 221 HIS ND1 HD1 sing N N 222 HIS CD2 NE2 sing Y N 223 HIS CD2 HD2 sing N N 224 HIS CE1 NE2 sing Y N 225 HIS CE1 HE1 sing N N 226 HIS NE2 HE2 sing N N 227 HIS OXT HXT sing N N 228 HOH O H1 sing N N 229 HOH O H2 sing N N 230 ILE N CA sing N N 231 ILE N H sing N N 232 ILE N H2 sing N N 233 ILE CA C sing N N 234 ILE CA CB sing N N 235 ILE CA HA sing N N 236 ILE C O doub N N 237 ILE C OXT sing N N 238 ILE CB CG1 sing N N 239 ILE CB CG2 sing N N 240 ILE CB HB sing N N 241 ILE CG1 CD1 sing N N 242 ILE CG1 HG12 sing N N 243 ILE CG1 HG13 sing N N 244 ILE CG2 HG21 sing N N 245 ILE CG2 HG22 sing N N 246 ILE CG2 HG23 sing N N 247 ILE CD1 HD11 sing N N 248 ILE CD1 HD12 sing N N 249 ILE CD1 HD13 sing N N 250 ILE OXT HXT sing N N 251 LEU N CA sing N N 252 LEU N H sing N N 253 LEU N H2 sing N N 254 LEU CA C sing N N 255 LEU CA CB sing N N 256 LEU CA HA sing N N 257 LEU C O doub N N 258 LEU C OXT sing N N 259 LEU CB CG sing N N 260 LEU CB HB2 sing N N 261 LEU CB HB3 sing N N 262 LEU CG CD1 sing N N 263 LEU CG CD2 sing N N 264 LEU CG HG sing N N 265 LEU CD1 HD11 sing N N 266 LEU CD1 HD12 sing N N 267 LEU CD1 HD13 sing N N 268 LEU CD2 HD21 sing N N 269 LEU CD2 HD22 sing N N 270 LEU CD2 HD23 sing N N 271 LEU OXT HXT sing N N 272 LYS N CA sing N N 273 LYS N H sing N N 274 LYS N H2 sing N N 275 LYS CA C sing N N 276 LYS CA CB sing N N 277 LYS CA HA sing N N 278 LYS C O doub N N 279 LYS C OXT sing N N 280 LYS CB CG sing N N 281 LYS CB HB2 sing N N 282 LYS CB HB3 sing N N 283 LYS CG CD sing N N 284 LYS CG HG2 sing N N 285 LYS CG HG3 sing N N 286 LYS CD CE sing N N 287 LYS CD HD2 sing N N 288 LYS CD HD3 sing N N 289 LYS CE NZ sing N N 290 LYS CE HE2 sing N N 291 LYS CE HE3 sing N N 292 LYS NZ HZ1 sing N N 293 LYS NZ HZ2 sing N N 294 LYS NZ HZ3 sing N N 295 LYS OXT HXT sing N N 296 MET N CA sing N N 297 MET N H sing N N 298 MET N H2 sing N N 299 MET CA C sing N N 300 MET CA CB sing N N 301 MET CA HA sing N N 302 MET C O doub N N 303 MET C OXT sing N N 304 MET CB CG sing N N 305 MET CB HB2 sing N N 306 MET CB HB3 sing N N 307 MET CG SD sing N N 308 MET CG HG2 sing N N 309 MET CG HG3 sing N N 310 MET SD CE sing N N 311 MET CE HE1 sing N N 312 MET CE HE2 sing N N 313 MET CE HE3 sing N N 314 MET OXT HXT sing N N 315 NGA C1 C2 sing N N 316 NGA C1 O1 sing N N 317 NGA C1 O5 sing N N 318 NGA C1 H1 sing N N 319 NGA C2 C3 sing N N 320 NGA C2 N2 sing N N 321 NGA C2 H2 sing N N 322 NGA C3 C4 sing N N 323 NGA C3 O3 sing N N 324 NGA C3 H3 sing N N 325 NGA C4 C5 sing N N 326 NGA C4 O4 sing N N 327 NGA C4 H4 sing N N 328 NGA C5 C6 sing N N 329 NGA C5 O5 sing N N 330 NGA C5 H5 sing N N 331 NGA C6 O6 sing N N 332 NGA C6 H61 sing N N 333 NGA C6 H62 sing N N 334 NGA C7 C8 sing N N 335 NGA C7 N2 sing N N 336 NGA C7 O7 doub N N 337 NGA C8 H81 sing N N 338 NGA C8 H82 sing N N 339 NGA C8 H83 sing N N 340 NGA N2 HN2 sing N N 341 NGA O1 HO1 sing N N 342 NGA O3 HO3 sing N N 343 NGA O4 HO4 sing N N 344 NGA O6 HO6 sing N N 345 PHE N CA sing N N 346 PHE N H sing N N 347 PHE N H2 sing N N 348 PHE CA C sing N N 349 PHE CA CB sing N N 350 PHE CA HA sing N N 351 PHE C O doub N N 352 PHE C OXT sing N N 353 PHE CB CG sing N N 354 PHE CB HB2 sing N N 355 PHE CB HB3 sing N N 356 PHE CG CD1 doub Y N 357 PHE CG CD2 sing Y N 358 PHE CD1 CE1 sing Y N 359 PHE CD1 HD1 sing N N 360 PHE CD2 CE2 doub Y N 361 PHE CD2 HD2 sing N N 362 PHE CE1 CZ doub Y N 363 PHE CE1 HE1 sing N N 364 PHE CE2 CZ sing Y N 365 PHE CE2 HE2 sing N N 366 PHE CZ HZ sing N N 367 PHE OXT HXT sing N N 368 PRO N CA sing N N 369 PRO N CD sing N N 370 PRO N H sing N N 371 PRO CA C sing N N 372 PRO CA CB sing N N 373 PRO CA HA sing N N 374 PRO C O doub N N 375 PRO C OXT sing N N 376 PRO CB CG sing N N 377 PRO CB HB2 sing N N 378 PRO CB HB3 sing N N 379 PRO CG CD sing N N 380 PRO CG HG2 sing N N 381 PRO CG HG3 sing N N 382 PRO CD HD2 sing N N 383 PRO CD HD3 sing N N 384 PRO OXT HXT sing N N 385 SER N CA sing N N 386 SER N H sing N N 387 SER N H2 sing N N 388 SER CA C sing N N 389 SER CA CB sing N N 390 SER CA HA sing N N 391 SER C O doub N N 392 SER C OXT sing N N 393 SER CB OG sing N N 394 SER CB HB2 sing N N 395 SER CB HB3 sing N N 396 SER OG HG sing N N 397 SER OXT HXT sing N N 398 THR N CA sing N N 399 THR N H sing N N 400 THR N H2 sing N N 401 THR CA C sing N N 402 THR CA CB sing N N 403 THR CA HA sing N N 404 THR C O doub N N 405 THR C OXT sing N N 406 THR CB OG1 sing N N 407 THR CB CG2 sing N N 408 THR CB HB sing N N 409 THR OG1 HG1 sing N N 410 THR CG2 HG21 sing N N 411 THR CG2 HG22 sing N N 412 THR CG2 HG23 sing N N 413 THR OXT HXT sing N N 414 TRP N CA sing N N 415 TRP N H sing N N 416 TRP N H2 sing N N 417 TRP CA C sing N N 418 TRP CA CB sing N N 419 TRP CA HA sing N N 420 TRP C O doub N N 421 TRP C OXT sing N N 422 TRP CB CG sing N N 423 TRP CB HB2 sing N N 424 TRP CB HB3 sing N N 425 TRP CG CD1 doub Y N 426 TRP CG CD2 sing Y N 427 TRP CD1 NE1 sing Y N 428 TRP CD1 HD1 sing N N 429 TRP CD2 CE2 doub Y N 430 TRP CD2 CE3 sing Y N 431 TRP NE1 CE2 sing Y N 432 TRP NE1 HE1 sing N N 433 TRP CE2 CZ2 sing Y N 434 TRP CE3 CZ3 doub Y N 435 TRP CE3 HE3 sing N N 436 TRP CZ2 CH2 doub Y N 437 TRP CZ2 HZ2 sing N N 438 TRP CZ3 CH2 sing Y N 439 TRP CZ3 HZ3 sing N N 440 TRP CH2 HH2 sing N N 441 TRP OXT HXT sing N N 442 TYR N CA sing N N 443 TYR N H sing N N 444 TYR N H2 sing N N 445 TYR CA C sing N N 446 TYR CA CB sing N N 447 TYR CA HA sing N N 448 TYR C O doub N N 449 TYR C OXT sing N N 450 TYR CB CG sing N N 451 TYR CB HB2 sing N N 452 TYR CB HB3 sing N N 453 TYR CG CD1 doub Y N 454 TYR CG CD2 sing Y N 455 TYR CD1 CE1 sing Y N 456 TYR CD1 HD1 sing N N 457 TYR CD2 CE2 doub Y N 458 TYR CD2 HD2 sing N N 459 TYR CE1 CZ doub Y N 460 TYR CE1 HE1 sing N N 461 TYR CE2 CZ sing Y N 462 TYR CE2 HE2 sing N N 463 TYR CZ OH sing N N 464 TYR OH HH sing N N 465 TYR OXT HXT sing N N 466 VAL N CA sing N N 467 VAL N H sing N N 468 VAL N H2 sing N N 469 VAL CA C sing N N 470 VAL CA CB sing N N 471 VAL CA HA sing N N 472 VAL C O doub N N 473 VAL C OXT sing N N 474 VAL CB CG1 sing N N 475 VAL CB CG2 sing N N 476 VAL CB HB sing N N 477 VAL CG1 HG11 sing N N 478 VAL CG1 HG12 sing N N 479 VAL CG1 HG13 sing N N 480 VAL CG2 HG21 sing N N 481 VAL CG2 HG22 sing N N 482 VAL CG2 HG23 sing N N 483 VAL OXT HXT sing N N 484 # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier A2G 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGalpNAca A2G 'COMMON NAME' GMML 1.0 N-acetyl-a-D-galactopyranosamine A2G 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 a-D-GalpNAc A2G 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 GalNAc NGA 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGalpNAcb NGA 'COMMON NAME' GMML 1.0 N-acetyl-b-D-galactopyranosamine NGA 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-GalpNAc NGA 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 GalNAc # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'CHLORIDE ION' CL 3 'CALCIUM ION' CA 4 2-acetamido-2-deoxy-alpha-D-galactopyranose A2G 5 2-acetamido-2-deoxy-beta-D-galactopyranose NGA 6 '2-(2-{2-[2-(2-METHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHANOL' 1PG 7 1,2-ETHANEDIOL EDO 8 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 2VM9 _pdbx_initial_refinement_model.details 'PDB ENTRY 2VM9' #