HEADER VIRAL PROTEIN 05-FEB-08 2VNL TITLE MUTANT Y108WDEL OF THE HEADBINDING DOMAIN OF PHAGE P22 TAILSPIKE C- TITLE 2 TERMINALLY FUSED TO ISOLEUCINE ZIPPER PIIGCN4 (CHIMERA II) COMPND MOL_ID: 1; COMPND 2 MOLECULE: BIFUNCTIONAL TAIL PROTEIN, PIIGCN4; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: HEAD-BINDING DOMAIN, RESIDUES 2-122; COMPND 5 SYNONYM: LATE PROTEIN GP9, TAILSPIKE PROTEIN; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES; COMPND 8 OTHER_DETAILS: AMINO ACIDS 2-122 OF PHAGE P22 TAILSPIKE HAVE BEEN COMPND 9 LINKED TO THE ISOLEUCINE ZIPPER PIIGCN4 (LACKING THE N-TERMINAL MET) COMPND 10 123-152 SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ENTEROBACTERIA PHAGE P22, SACCHAROMYCES SOURCE 3 CEREVISIAE; SOURCE 4 ORGANISM_COMMON: SALMONELLA PHAGE P22, BAKER'S YEAST; SOURCE 5 ORGANISM_TAXID: 10754, 4932; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET17B KEYWDS CHIMERA, HYDROLASE, LATE PROTEIN, VIRAL PROTEIN, PHAGE P22 TAILSPIKE KEYWDS 2 PROTEIN, MUTANT Y108WDEL, HEAD-BINDING DOMAIN, ISOLEUCINE ZIPPER KEYWDS 3 PIIGCN4 EXPDTA X-RAY DIFFRACTION AUTHOR J.J.MUELLER,A.SEUL,G.MUELLER,R.SECKLER,U.HEINEMANN REVDAT 6 13-DEC-23 2VNL 1 REMARK REVDAT 5 30-JAN-19 2VNL 1 REMARK REVDAT 4 15-MAR-17 2VNL 1 SOURCE REVDAT 3 21-MAY-14 2VNL 1 JRNL REVDAT 2 14-MAY-14 2VNL 1 TITLE JRNL REMARK VERSN REVDAT 2 2 1 HETNAM HETSYN FORMUL SITE REVDAT 1 10-FEB-09 2VNL 0 JRNL AUTH A.SEUL,J.J.MUELLER,D.ANDRES,E.STETTNER,U.HEINEMANN,R.SECKLER JRNL TITL BACTERIOPHAGE P22 TAILSPIKE: STRUCTURE OF THE COMPLETE JRNL TITL 2 PROTEIN AND FUNCTION OF THE INTERDOMAIN LINKER JRNL REF ACTA CRYSTALLOGR.,SECT.D V. 70 1336 2014 JRNL REFN ISSN 0907-4449 JRNL PMID 24816102 JRNL DOI 10.1107/S1399004714002685 REMARK 2 REMARK 2 RESOLUTION. 1.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 19.37 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 3 NUMBER OF REFLECTIONS : 17174 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.192 REMARK 3 R VALUE (WORKING SET) : 0.190 REMARK 3 FREE R VALUE : 0.229 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.200 REMARK 3 FREE R VALUE TEST SET COUNT : 934 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 15 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.80 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.86 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1666 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 BIN R VALUE (WORKING SET) : 0.2310 REMARK 3 BIN FREE R VALUE SET COUNT : 94 REMARK 3 BIN FREE R VALUE : 0.2560 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1158 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 18 REMARK 3 SOLVENT ATOMS : 131 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 31.35 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.02000 REMARK 3 B22 (A**2) : -0.02000 REMARK 3 B33 (A**2) : 0.03000 REMARK 3 B12 (A**2) : -0.01000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.117 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.117 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.077 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 2.404 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.957 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.938 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1225 ; 0.013 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 821 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 1659 ; 1.287 ; 1.955 REMARK 3 BOND ANGLES OTHERS (DEGREES): 2035 ; 0.854 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 146 ; 5.715 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 60 ;31.041 ;26.167 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 221 ;12.989 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 4 ; 7.497 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 190 ; 0.083 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1324 ; 0.005 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 211 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 249 ; 0.202 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 823 ; 0.174 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 610 ; 0.173 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): 599 ; 0.085 ; 0.200 REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 69 ; 0.149 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 33 ; 0.197 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): 70 ; 0.242 ; 0.200 REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 24 ; 0.192 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 975 ; 1.722 ; 2.000 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1217 ; 1.990 ; 3.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 561 ; 1.929 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 442 ; 2.597 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS. THE HEAD-BINDING DOMAIN IS FUSED TO THE ISOLEUCINE REMARK 3 ZIPPER PIIGCN4. THE BIOLOGICALLY ACTIVE HEAD- BINDING DOMAIN IS REMARK 3 A CRYSTALLOGRAPHIC TRIMER. REMARK 4 REMARK 4 2VNL COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 05-FEB-08. REMARK 100 THE DEPOSITION ID IS D_1290034811. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 27-OCT-06 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : BESSY REMARK 200 BEAMLINE : 14.1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.95373 REMARK 200 MONOCHROMATOR : SI-111 REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 17904 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.800 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.5 REMARK 200 DATA REDUNDANCY : 7.300 REMARK 200 R MERGE (I) : 0.05000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 22.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.93 REMARK 200 COMPLETENESS FOR SHELL (%) : 95.5 REMARK 200 DATA REDUNDANCY IN SHELL : 7.30 REMARK 200 R MERGE FOR SHELL (I) : 0.38000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 5.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRIES 1LKT, 1EBO REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 54.10 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.70 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: VAPOR DIFFUSION, HANGING DROP. REMARK 280 PROTEIN: CONC. 9.3 MG/ML,BUFFER 50MM HEPES, PH6.5; RESERVOIR:20% REMARK 280 ISOPROPANOL, 0.1M NA-ACETATE, PH4.6, 0.2M CACL2; DROPLET 2 REMARK 280 MICROL:2 MICROL.CRYO:30% GLYCEROL. REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: H 3 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 X+2/3,Y+1/3,Z+1/3 REMARK 290 5555 -Y+2/3,X-Y+1/3,Z+1/3 REMARK 290 6555 -X+Y+2/3,-X+1/3,Z+1/3 REMARK 290 7555 X+1/3,Y+2/3,Z+2/3 REMARK 290 8555 -Y+1/3,X-Y+2/3,Z+2/3 REMARK 290 9555 -X+Y+1/3,-X+2/3,Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 29.00600 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 16.74662 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 52.03667 REMARK 290 SMTRY1 5 -0.500000 -0.866025 0.000000 29.00600 REMARK 290 SMTRY2 5 0.866025 -0.500000 0.000000 16.74662 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 52.03667 REMARK 290 SMTRY1 6 -0.500000 0.866025 0.000000 29.00600 REMARK 290 SMTRY2 6 -0.866025 -0.500000 0.000000 16.74662 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 52.03667 REMARK 290 SMTRY1 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 33.49324 REMARK 290 SMTRY3 7 0.000000 0.000000 1.000000 104.07333 REMARK 290 SMTRY1 8 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 8 0.866025 -0.500000 0.000000 33.49324 REMARK 290 SMTRY3 8 0.000000 0.000000 1.000000 104.07333 REMARK 290 SMTRY1 9 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 -0.500000 0.000000 33.49324 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 104.07333 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 15100 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 21290 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -98.4 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.500000 -0.866025 0.000000 58.01200 REMARK 350 BIOMT2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 -0.500000 0.866025 0.000000 29.00600 REMARK 350 BIOMT2 3 -0.866025 -0.500000 0.000000 50.23987 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A2004 LIES ON A SPECIAL POSITION. REMARK 375 HOH A2009 LIES ON A SPECIAL POSITION. REMARK 375 HOH A2013 LIES ON A SPECIAL POSITION. REMARK 400 REMARK 400 COMPOUND REMARK 400 ENGINEERED RESIDUE IN CHAIN A, TYR 109 TO TRP REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 THR A 2 REMARK 465 ASP A 3 REMARK 465 ILE A 4 REMARK 465 GLU A 152 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 283 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 284 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 285 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2VFO RELATED DB: PDB REMARK 900 LOW TEMPERATURE STRUCTURE OF P22 TAILSPIKE PROTEIN FRAGMENT (109- REMARK 900 666), MUTANT V125L REMARK 900 RELATED ID: 2VKY RELATED DB: PDB REMARK 900 HEADBINDING DOMAIN OF PHAGE P22 TAILSPIKE C -TERMINALLY FUSED TO REMARK 900 ISOLEUCINE ZIPPER PIIGCN4 (CHIMERA I) REMARK 900 RELATED ID: 2VFN RELATED DB: PDB REMARK 900 LOW TEMPERATURE STRUCTURE OF P22 TAILSPIKE PROTEIN FRAGMENT (109- REMARK 900 666), MUTANT V125A REMARK 900 RELATED ID: 2VFQ RELATED DB: PDB REMARK 900 LOW TEMPERATURE STRUCTURE OF P22 TAILSPIKE PROTEIN FRAGMENT (109- REMARK 900 666), MUTANT V450A REMARK 900 RELATED ID: 1QRC RELATED DB: PDB REMARK 900 TAILSPIKE PROTEIN, MUTANT W391A REMARK 900 RELATED ID: 1CLW RELATED DB: PDB REMARK 900 TAILSPIKE PROTEIN FROM PHAGE P22, V331A MUTANT REMARK 900 RELATED ID: 1QRB RELATED DB: PDB REMARK 900 PLASTICITY AND STERIC STRAIN IN A PARALLEL BETA-HELIX:RATIONAL REMARK 900 MUTATIONS IN P22 TAILSPIKE PROTEIN REMARK 900 RELATED ID: 1TSP RELATED DB: PDB REMARK 900 RELATED ID: 1QA2 RELATED DB: PDB REMARK 900 TAILSPIKE PROTEIN, MUTANT A334V REMARK 900 RELATED ID: 2VFP RELATED DB: PDB REMARK 900 LOW TEMPERATURE STRUCTURE OF P22 TAILSPIKE PROTEIN FRAGMENT (109- REMARK 900 666), MUTANT V349L REMARK 900 RELATED ID: 2VFM RELATED DB: PDB REMARK 900 LOW TEMPERATURE STRUCTURE OF P22 TAILSPIKE PROTEIN FRAGMENT (109- REMARK 900 666) REMARK 900 RELATED ID: 1LKT RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF THE HEAD-BINDING DOMAIN OF PHAGE P22TAILSPIKE REMARK 900 PROTEIN REMARK 900 RELATED ID: 1QA3 RELATED DB: PDB REMARK 900 TAILSPIKE PROTEIN, MUTANT A334I REMARK 900 RELATED ID: 1TYV RELATED DB: PDB REMARK 900 STRUCTURE OF TAILSPIKE-PROTEIN REMARK 900 RELATED ID: 1QA1 RELATED DB: PDB REMARK 900 TAILSPIKE PROTEIN, MUTANT V331G REMARK 900 RELATED ID: 1QQ1 RELATED DB: PDB REMARK 900 TAILSPIKE PROTEIN, MUTANT E359G REMARK 900 RELATED ID: 2XC1 RELATED DB: PDB REMARK 900 FULL-LENGTH TAILSPIKE PROTEIN MUTANT Y108W OF BACTERIOPHAGE P22 REMARK 999 REMARK 999 SEQUENCE REMARK 999 MUTATION Y108W REMARK 999 PIIGCN4 COMPRISES RESIDUES 1 TO 31 OF GI5542583, CHIMERA II REMARK 999 (THIS ENTRY) (CORRESPONDING TO 123 TO 152) DBREF 2VNL A 2 122 UNP P12528 TSPE_BPP22 2 122 DBREF 2VNL A 123 151 PDB 2VNL 2VNL 123 151 SEQADV 2VNL TRP A 109 UNP P12528 TYR 109 ENGINEERED MUTATION SEQRES 1 A 151 THR ASP ILE THR ALA ASN VAL VAL VAL SER ASN PRO ARG SEQRES 2 A 151 PRO ILE PHE THR GLU SER ARG SER PHE LYS ALA VAL ALA SEQRES 3 A 151 ASN GLY LYS ILE TYR ILE GLY GLN ILE ASP THR ASP PRO SEQRES 4 A 151 VAL ASN PRO ALA ASN GLN ILE PRO VAL TYR ILE GLU ASN SEQRES 5 A 151 GLU ASP GLY SER HIS VAL GLN ILE THR GLN PRO LEU ILE SEQRES 6 A 151 ILE ASN ALA ALA GLY LYS ILE VAL TYR ASN GLY GLN LEU SEQRES 7 A 151 VAL LYS ILE VAL THR VAL GLN GLY HIS SER MET ALA ILE SEQRES 8 A 151 TYR ASP ALA ASN GLY SER GLN VAL ASP TYR ILE ALA ASN SEQRES 9 A 151 VAL LEU LYS TRP ASP PRO ASP GLN TYR SER ILE GLU ALA SEQRES 10 A 151 ASP LYS LYS PHE LYS GLN ILE GLU ASP LYS ILE GLU GLU SEQRES 11 A 151 ILE LEU SER LYS ILE TYR HIS ILE GLU ASN GLU ILE ALA SEQRES 12 A 151 ARG ILE LYS LYS LEU ILE GLY GLU HET GOL A 283 6 HET GOL A 284 6 HET GOL A 285 6 HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 2 GOL 3(C3 H8 O3) FORMUL 5 HOH *131(H2 O) HELIX 1 1 ASN A 42 ASN A 45 5 4 HELIX 2 2 ASN A 105 ASP A 110 5 6 HELIX 3 3 TYR A 114 GLY A 151 1 38 SHEET 1 AA 6 GLN A 78 LEU A 79 0 SHEET 2 AA 6 ILE A 73 TYR A 75 -1 O TYR A 75 N GLN A 78 SHEET 3 AA 6 LEU A 65 ILE A 67 -1 O ILE A 66 N VAL A 74 SHEET 4 AA 6 LYS A 30 GLY A 34 -1 O ILE A 31 N LEU A 65 SHEET 5 AA 6 SER A 89 TYR A 93 -1 O SER A 89 N GLY A 34 SHEET 6 AA 6 GLN A 99 ILE A 103 -1 N VAL A 100 O ILE A 92 SHEET 1 AB 3 HIS A 58 ILE A 61 0 SHEET 2 AB 3 VAL A 49 GLU A 52 -1 O VAL A 49 N ILE A 61 SHEET 3 AB 3 ILE A 82 VAL A 83 -1 O VAL A 83 N TYR A 50 CISPEP 1 GLN A 63 PRO A 64 0 0.42 SITE 1 AC1 4 VAL A 74 TYR A 75 ASN A 76 GLY A 77 SITE 1 AC2 7 ASP A 39 VAL A 41 ALA A 91 TYR A 93 SITE 2 AC2 7 GLN A 99 TYR A 102 LYS A 135 SITE 1 AC3 4 TYR A 32 VAL A 41 HOH A2117 HOH A2131 CRYST1 58.012 58.012 156.110 90.00 90.00 120.00 H 3 9 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017238 0.009952 0.000000 0.00000 SCALE2 0.000000 0.019904 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006406 0.00000