data_2VOD # _entry.id 2VOD # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.279 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 2VOD PDBE EBI-35328 WWPDB D_1290035328 # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.content_type _pdbx_database_related.details PDB 1S7A unspecified 'NMR STRUCTURE OF THE LA MOTIF OF HUMAN LA PROTEIN' PDB 1YTY unspecified ;STRUCTURAL BASIS FOR RECOGNITION OF UUUOH 3 '-TERMINII OFNASCENT RNA POL III TRANSCRIPTS BY LA AUTOANTIGEN ; PDB 1ZH5 unspecified ;STRUCTURAL BASIS FOR RECOGNITION OF UUUOH 3 '-TERMINII OFNASCENT RNA POL III TRANSCRIPTS BY LA AUTOANTIGEN ; PDB 1S79 unspecified 'SOLUTION STRUCTURE OF THE CENTRAL RRM OF HUMAN LA PROTEIN' PDB 2VOO unspecified 'CRYSTAL STRUCTURE OF N-TERMINAL DOMAINS OF HUMAN LA PROTEIN COMPLEXED WITH RNA OLIGOMER UUUUUUUU' PDB 2VOP unspecified 'CRYSTAL STRUCTURE OF N-TERMINAL DOMAINS OF HUMAN LA PROTEIN COMPLEXED WITH RNA OLIGOMER AUUUU' PDB 2VON unspecified 'CRYSTAL STRUCTURE OF N-TERMINAL DOMAINS OF HUMAN LA PROTEIN COMPLEXED WITH RNA OLIGOMER AUAUUUU' PDB 1OWX unspecified 'SOLUTION STRUCTURE OF THE C-TERMINAL RRM OF HUMAN LA (LA225-334)' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 2VOD _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.SG_entry . _pdbx_database_status.recvd_initial_deposition_date 2008-02-15 _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Kotik-Kogan, O.' 1 'Valentine, E.R.' 2 'Sanfelice, D.' 3 'Conte, M.R.' 4 'Curry, S.' 5 # _citation.id primary _citation.title ;Structural Analysis Reveals Conformational Plasticity in the Recognition of RNA 3' Ends by the Human La Protein. ; _citation.journal_abbrev Structure _citation.journal_volume 16 _citation.page_first 852 _citation.page_last ? _citation.year 2008 _citation.journal_id_ASTM STRUE6 _citation.country UK _citation.journal_id_ISSN 0969-2126 _citation.journal_id_CSD 2005 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 18547518 _citation.pdbx_database_id_DOI 10.1016/J.STR.2008.02.021 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Kotik-Kogan, O.' 1 primary 'Valentine, E.R.' 2 primary 'Sanfelice, D.' 3 primary 'Conte, M.R.' 4 primary 'Curry, S.' 5 # _cell.entry_id 2VOD _cell.length_a 140.029 _cell.length_b 44.471 _cell.length_c 91.285 _cell.angle_alpha 90.00 _cell.angle_beta 114.35 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2VOD _symmetry.space_group_name_H-M 'C 1 2 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'LUPUS LA PROTEIN' 22529.809 2 ? ? 'N-TERMINAL DOMAIN, RESIDUES 4-194' ? 2 polymer syn "5'-R(*AP*UP*AP*UP*UP*UP*UP)-3'" 2144.283 2 ? ? ? ? 3 water nat water 18.015 164 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'HUMAN LA PROTEIN, SJOEGREN SYNDROME TYPE B ANTIGEN, SS-B, LA RIBONUCLEOPROTEIN, LA AUTOANTIGEN' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;GSNGDNEKMAALEAKICHQIEYYFGDFNLPRDKFLKEQIKLDEGWVPLEIMIKFNRLNRLTTDFNVIVEALSKSKAELME ISEDKTKIRRSPSKPLPEVTDEYKNDVKNRSVYIKGFPTDATLDDIKEWLEDKGQVLNIQMRRTLHKAFKGSIFVVFDSI ESAKKFVETPGQKYKETDLLILFKDDYFAKKNE ; ;GSNGDNEKMAALEAKICHQIEYYFGDFNLPRDKFLKEQIKLDEGWVPLEIMIKFNRLNRLTTDFNVIVEALSKSKAELME ISEDKTKIRRSPSKPLPEVTDEYKNDVKNRSVYIKGFPTDATLDDIKEWLEDKGQVLNIQMRRTLHKAFKGSIFVVFDSI ESAKKFVETPGQKYKETDLLILFKDDYFAKKNE ; A,B ? 2 polyribonucleotide no no AUAUUUU AUAUUUU C,D ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 SER n 1 3 ASN n 1 4 GLY n 1 5 ASP n 1 6 ASN n 1 7 GLU n 1 8 LYS n 1 9 MET n 1 10 ALA n 1 11 ALA n 1 12 LEU n 1 13 GLU n 1 14 ALA n 1 15 LYS n 1 16 ILE n 1 17 CYS n 1 18 HIS n 1 19 GLN n 1 20 ILE n 1 21 GLU n 1 22 TYR n 1 23 TYR n 1 24 PHE n 1 25 GLY n 1 26 ASP n 1 27 PHE n 1 28 ASN n 1 29 LEU n 1 30 PRO n 1 31 ARG n 1 32 ASP n 1 33 LYS n 1 34 PHE n 1 35 LEU n 1 36 LYS n 1 37 GLU n 1 38 GLN n 1 39 ILE n 1 40 LYS n 1 41 LEU n 1 42 ASP n 1 43 GLU n 1 44 GLY n 1 45 TRP n 1 46 VAL n 1 47 PRO n 1 48 LEU n 1 49 GLU n 1 50 ILE n 1 51 MET n 1 52 ILE n 1 53 LYS n 1 54 PHE n 1 55 ASN n 1 56 ARG n 1 57 LEU n 1 58 ASN n 1 59 ARG n 1 60 LEU n 1 61 THR n 1 62 THR n 1 63 ASP n 1 64 PHE n 1 65 ASN n 1 66 VAL n 1 67 ILE n 1 68 VAL n 1 69 GLU n 1 70 ALA n 1 71 LEU n 1 72 SER n 1 73 LYS n 1 74 SER n 1 75 LYS n 1 76 ALA n 1 77 GLU n 1 78 LEU n 1 79 MET n 1 80 GLU n 1 81 ILE n 1 82 SER n 1 83 GLU n 1 84 ASP n 1 85 LYS n 1 86 THR n 1 87 LYS n 1 88 ILE n 1 89 ARG n 1 90 ARG n 1 91 SER n 1 92 PRO n 1 93 SER n 1 94 LYS n 1 95 PRO n 1 96 LEU n 1 97 PRO n 1 98 GLU n 1 99 VAL n 1 100 THR n 1 101 ASP n 1 102 GLU n 1 103 TYR n 1 104 LYS n 1 105 ASN n 1 106 ASP n 1 107 VAL n 1 108 LYS n 1 109 ASN n 1 110 ARG n 1 111 SER n 1 112 VAL n 1 113 TYR n 1 114 ILE n 1 115 LYS n 1 116 GLY n 1 117 PHE n 1 118 PRO n 1 119 THR n 1 120 ASP n 1 121 ALA n 1 122 THR n 1 123 LEU n 1 124 ASP n 1 125 ASP n 1 126 ILE n 1 127 LYS n 1 128 GLU n 1 129 TRP n 1 130 LEU n 1 131 GLU n 1 132 ASP n 1 133 LYS n 1 134 GLY n 1 135 GLN n 1 136 VAL n 1 137 LEU n 1 138 ASN n 1 139 ILE n 1 140 GLN n 1 141 MET n 1 142 ARG n 1 143 ARG n 1 144 THR n 1 145 LEU n 1 146 HIS n 1 147 LYS n 1 148 ALA n 1 149 PHE n 1 150 LYS n 1 151 GLY n 1 152 SER n 1 153 ILE n 1 154 PHE n 1 155 VAL n 1 156 VAL n 1 157 PHE n 1 158 ASP n 1 159 SER n 1 160 ILE n 1 161 GLU n 1 162 SER n 1 163 ALA n 1 164 LYS n 1 165 LYS n 1 166 PHE n 1 167 VAL n 1 168 GLU n 1 169 THR n 1 170 PRO n 1 171 GLY n 1 172 GLN n 1 173 LYS n 1 174 TYR n 1 175 LYS n 1 176 GLU n 1 177 THR n 1 178 ASP n 1 179 LEU n 1 180 LEU n 1 181 ILE n 1 182 LEU n 1 183 PHE n 1 184 LYS n 1 185 ASP n 1 186 ASP n 1 187 TYR n 1 188 PHE n 1 189 ALA n 1 190 LYS n 1 191 LYS n 1 192 ASN n 1 193 GLU n 2 1 A n 2 2 U n 2 3 A n 2 4 U n 2 5 U n 2 6 U n 2 7 U n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name HUMAN _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'HOMO SAPIENS' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'ESCHERICHIA COLI' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name PETM11 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _pdbx_entity_src_syn.entity_id 2 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num ? _pdbx_entity_src_syn.pdbx_end_seq_num ? _pdbx_entity_src_syn.organism_scientific 'HOMO SAPIENS' _pdbx_entity_src_syn.organism_common_name HUMAN _pdbx_entity_src_syn.ncbi_taxonomy_id 9606 _pdbx_entity_src_syn.details ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform 1 PDB 2VOD 1 ? ? 2VOD ? 2 UNP LA_HUMAN 1 ? ? P05455 ? 3 PDB 2VOD 2 ? ? 2VOD ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 2VOD A 1 ? 2 ? 2VOD 2 ? 3 ? 2 3 2 2 2VOD A 3 ? 193 ? P05455 4 ? 194 ? 4 194 3 1 2VOD B 1 ? 2 ? 2VOD 2 ? 3 ? 2 3 4 2 2VOD B 3 ? 193 ? P05455 4 ? 194 ? 4 194 5 3 2VOD C 1 ? 7 ? 2VOD -7 ? -1 ? -7 -1 6 3 2VOD D 1 ? 7 ? 2VOD -7 ? -1 ? -7 -1 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight A 'RNA linking' y "ADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 U 'RNA linking' y "URIDINE-5'-MONOPHOSPHATE" ? 'C9 H13 N2 O9 P' 324.181 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 2VOD _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.64 _exptl_crystal.density_percent_sol 52.98 _exptl_crystal.description NONE # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method ? _exptl_crystal_grow.temp ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 5 _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details 'pH 5' # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC CCD' _diffrn_detector.pdbx_collection_date 2007-07-15 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'SINGLE SILICON (111) MONOCHROMATOR' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.87026 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'ESRF BEAMLINE ID23-1' _diffrn_source.pdbx_synchrotron_site ESRF _diffrn_source.pdbx_synchrotron_beamline ID23-1 _diffrn_source.pdbx_wavelength 0.87026 _diffrn_source.pdbx_wavelength_list ? # _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.entry_id 2VOD _reflns.observed_criterion_sigma_I 0.0 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 43.00 _reflns.d_resolution_high 2.10 _reflns.number_obs 28656 _reflns.number_all ? _reflns.percent_possible_obs 95.2 _reflns.pdbx_Rmerge_I_obs 0.08 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 8.10 _reflns.B_iso_Wilson_estimate 16.2 _reflns.pdbx_redundancy 2.7 # _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_ordinal 1 _reflns_shell.d_res_high 2.10 _reflns_shell.d_res_low 2.21 _reflns_shell.percent_possible_all 95.0 _reflns_shell.Rmerge_I_obs 0.41 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 3.00 _reflns_shell.pdbx_redundancy 2.7 # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 2VOD _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 28656 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.0 _refine.pdbx_data_cutoff_high_absF 1693840.83 _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 42.80 _refine.ls_d_res_high 2.10 _refine.ls_percent_reflns_obs 94.4 _refine.ls_R_factor_obs 0.232 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.232 _refine.ls_R_factor_R_free 0.272 _refine.ls_R_factor_R_free_error 0.007 _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 4.9 _refine.ls_number_reflns_R_free 1396 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean 30.5 _refine.aniso_B[1][1] 5.96 _refine.aniso_B[2][2] -6.85 _refine.aniso_B[3][3] 0.89 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 4.04 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details 'FLAT MODEL' _refine.solvent_model_param_ksol 0.4 _refine.solvent_model_param_bsol 43.9873 _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'BULK SOLVENT MODEL USED' _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model RESTRAINED _refine.pdbx_stereochemistry_target_values MLF _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.pdbx_overall_phase_error ? _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_analyze.entry_id 2VOD _refine_analyze.Luzzati_coordinate_error_obs 0.28 _refine_analyze.Luzzati_sigma_a_obs 0.21 _refine_analyze.Luzzati_d_res_low_obs 5.00 _refine_analyze.Luzzati_coordinate_error_free 0.33 _refine_analyze.Luzzati_sigma_a_free 0.26 _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.occupancy_sum_non_hydrogen ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 3063 _refine_hist.pdbx_number_atoms_nucleic_acid 282 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 164 _refine_hist.number_atoms_total 3509 _refine_hist.d_res_high 2.10 _refine_hist.d_res_low 42.80 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function c_bond_d 0.006 ? ? ? 'X-RAY DIFFRACTION' ? c_bond_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_bond_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg 1.2 ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d 25.1 ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d 0.95 ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_mcbond_it 1.67 1.50 ? ? 'X-RAY DIFFRACTION' ? c_mcangle_it 2.56 2.00 ? ? 'X-RAY DIFFRACTION' ? c_scbond_it 3.66 2.00 ? ? 'X-RAY DIFFRACTION' ? c_scangle_it 4.72 2.50 ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.pdbx_total_number_of_bins_used 6 _refine_ls_shell.d_res_high 2.10 _refine_ls_shell.d_res_low 2.23 _refine_ls_shell.number_reflns_R_work 4467 _refine_ls_shell.R_factor_R_work 0.270 _refine_ls_shell.percent_reflns_obs 94.3 _refine_ls_shell.R_factor_R_free 0.308 _refine_ls_shell.R_factor_R_free_error 0.020 _refine_ls_shell.percent_reflns_R_free 5.3 _refine_ls_shell.number_reflns_R_free 250 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? # loop_ _pdbx_xplor_file.pdbx_refine_id _pdbx_xplor_file.serial_no _pdbx_xplor_file.param_file _pdbx_xplor_file.topol_file 'X-RAY DIFFRACTION' 1 PROTEIN_REP.PARAM PROTEIN.TOP 'X-RAY DIFFRACTION' 2 DNA-RNA-MULTI-ENDO-12.SC.PAR DNA-RNA-MULTI-ENDO-12.SC.TOP 'X-RAY DIFFRACTION' 3 WATER_REP.PARAM WATER.TOP 'X-RAY DIFFRACTION' 4 ION.ED-12.PAR ION.ED-12.TOP # _struct_ncs_oper.id 1 _struct_ncs_oper.code given _struct_ncs_oper.details ? _struct_ncs_oper.matrix[1][1] -0.646000 _struct_ncs_oper.matrix[1][2] 0.016700 _struct_ncs_oper.matrix[1][3] -0.763100 _struct_ncs_oper.matrix[2][1] -0.012400 _struct_ncs_oper.matrix[2][2] -0.999900 _struct_ncs_oper.matrix[2][3] -0.011400 _struct_ncs_oper.matrix[3][1] -0.763200 _struct_ncs_oper.matrix[3][2] 0.002100 _struct_ncs_oper.matrix[3][3] 0.646200 _struct_ncs_oper.vector[1] -6.85920 _struct_ncs_oper.vector[2] -35.51050 _struct_ncs_oper.vector[3] 14.71690 # _struct.entry_id 2VOD _struct.title 'Crystal structure of N-terminal domains of Human La protein complexed with RNA oligomer AUAUUUU' _struct.pdbx_descriptor 'LUPUS LA PROTEIN' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2VOD _struct_keywords.pdbx_keywords 'RNA BINDING PROTEIN' _struct_keywords.text ;RNA RECOGNITION MOTIF, SYSTEMIC LUPUS ERYTHEMATOSUS, PHOSPHOPROTEIN, RNA MATURATION, RNA-BINDING PROTEIN, NUCLEUS, LA MOTIF, RNA-BINDING, POLYMORPHISM, RNA BINDING PROTEIN ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 2 ? E N N 3 ? F N N 3 ? G N N 3 ? H N N 3 ? # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ASP A 5 ? PHE A 24 ? ASP A 6 PHE A 25 1 ? 20 HELX_P HELX_P2 2 ASN A 28 ? ARG A 31 ? ASN A 29 ARG A 32 5 ? 4 HELX_P HELX_P3 3 ASP A 32 ? ASP A 42 ? ASP A 33 ASP A 43 1 ? 11 HELX_P HELX_P4 4 LEU A 48 ? ILE A 52 ? LEU A 49 ILE A 53 1 ? 5 HELX_P HELX_P5 5 PHE A 54 ? THR A 61 ? PHE A 55 THR A 62 1 ? 8 HELX_P HELX_P6 6 ASP A 63 ? SER A 74 ? ASP A 64 SER A 75 1 ? 12 HELX_P HELX_P7 7 THR A 100 ? ASN A 109 ? THR A 101 ASN A 110 1 ? 10 HELX_P HELX_P8 8 THR A 122 ? GLU A 131 ? THR A 123 GLU A 132 1 ? 10 HELX_P HELX_P9 9 SER A 159 ? THR A 169 ? SER A 160 THR A 170 1 ? 11 HELX_P HELX_P10 10 LYS A 184 ? LYS A 191 ? LYS A 185 LYS A 192 1 ? 8 HELX_P HELX_P11 11 ASP B 5 ? PHE B 24 ? ASP B 6 PHE B 25 1 ? 20 HELX_P HELX_P12 12 ASN B 28 ? ARG B 31 ? ASN B 29 ARG B 32 5 ? 4 HELX_P HELX_P13 13 ASP B 32 ? ASP B 42 ? ASP B 33 ASP B 43 1 ? 11 HELX_P HELX_P14 14 LEU B 48 ? ILE B 52 ? LEU B 49 ILE B 53 1 ? 5 HELX_P HELX_P15 15 PHE B 54 ? THR B 61 ? PHE B 55 THR B 62 1 ? 8 HELX_P HELX_P16 16 ASP B 63 ? LEU B 71 ? ASP B 64 LEU B 72 1 ? 9 HELX_P HELX_P17 17 THR B 100 ? ARG B 110 ? THR B 101 ARG B 111 1 ? 11 HELX_P HELX_P18 18 THR B 122 ? GLU B 131 ? THR B 123 GLU B 132 1 ? 10 HELX_P HELX_P19 19 SER B 159 ? THR B 169 ? SER B 160 THR B 170 1 ? 11 HELX_P HELX_P20 20 LYS B 184 ? LYS B 190 ? LYS B 185 LYS B 191 1 ? 7 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA ? 3 ? AB ? 4 ? BA ? 3 ? BB ? 4 ? BC ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA 1 2 ? anti-parallel AA 2 3 ? anti-parallel AB 1 2 ? anti-parallel AB 2 3 ? anti-parallel AB 3 4 ? anti-parallel BA 1 2 ? anti-parallel BA 2 3 ? anti-parallel BB 1 2 ? anti-parallel BB 2 3 ? anti-parallel BB 3 4 ? anti-parallel BC 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA 1 VAL A 46 ? PRO A 47 ? VAL A 47 PRO A 48 AA 2 LYS A 87 ? ARG A 90 ? LYS A 88 ARG A 91 AA 3 MET A 79 ? ILE A 81 ? MET A 80 ILE A 82 AB 1 VAL A 136 ? ARG A 143 ? VAL A 137 ARG A 144 AB 2 PHE A 149 ? PHE A 157 ? PHE A 150 PHE A 158 AB 3 SER A 111 ? LYS A 115 ? SER A 112 LYS A 116 AB 4 LEU A 180 ? PHE A 183 ? LEU A 181 PHE A 184 BA 1 VAL B 46 ? PRO B 47 ? VAL B 47 PRO B 48 BA 2 LYS B 87 ? ARG B 90 ? LYS B 88 ARG B 91 BA 3 MET B 79 ? ILE B 81 ? MET B 80 ILE B 82 BB 1 VAL B 136 ? ARG B 143 ? VAL B 137 ARG B 144 BB 2 PHE B 149 ? PHE B 157 ? PHE B 150 PHE B 158 BB 3 SER B 111 ? LYS B 115 ? SER B 112 LYS B 116 BB 4 LEU B 180 ? PHE B 183 ? LEU B 181 PHE B 184 BC 1 LYS B 173 ? TYR B 174 ? LYS B 174 TYR B 175 BC 2 THR B 177 ? ASP B 178 ? THR B 178 ASP B 179 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA 1 2 N VAL A 46 ? N VAL A 47 O ILE A 88 ? O ILE A 89 AA 2 3 N ARG A 89 ? N ARG A 90 O GLU A 80 ? O GLU A 81 AB 1 2 O ARG A 142 ? O ARG A 143 N LYS A 150 ? N LYS A 151 AB 2 3 N VAL A 155 ? N VAL A 156 O VAL A 112 ? O VAL A 113 AB 3 4 N LYS A 115 ? N LYS A 116 O LEU A 180 ? O LEU A 181 BA 1 2 N VAL B 46 ? N VAL B 47 O ILE B 88 ? O ILE B 89 BA 2 3 N ARG B 89 ? N ARG B 90 O GLU B 80 ? O GLU B 81 BB 1 2 O ARG B 142 ? O ARG B 143 N LYS B 150 ? N LYS B 151 BB 2 3 N VAL B 155 ? N VAL B 156 O VAL B 112 ? O VAL B 113 BB 3 4 N LYS B 115 ? N LYS B 116 O LEU B 180 ? O LEU B 181 BC 1 2 N TYR B 174 ? N TYR B 175 O THR B 177 ? O THR B 178 # _database_PDB_matrix.entry_id 2VOD _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 2VOD _atom_sites.fract_transf_matrix[1][1] 0.007141 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.003232 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.022487 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.012024 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 2 ? ? ? A . n A 1 2 SER 2 3 ? ? ? A . n A 1 3 ASN 3 4 ? ? ? A . n A 1 4 GLY 4 5 ? ? ? A . n A 1 5 ASP 5 6 6 ASP ASP A . n A 1 6 ASN 6 7 7 ASN ASN A . n A 1 7 GLU 7 8 8 GLU GLU A . n A 1 8 LYS 8 9 9 LYS LYS A . n A 1 9 MET 9 10 10 MET MET A . n A 1 10 ALA 10 11 11 ALA ALA A . n A 1 11 ALA 11 12 12 ALA ALA A . n A 1 12 LEU 12 13 13 LEU LEU A . n A 1 13 GLU 13 14 14 GLU GLU A . n A 1 14 ALA 14 15 15 ALA ALA A . n A 1 15 LYS 15 16 16 LYS LYS A . n A 1 16 ILE 16 17 17 ILE ILE A . n A 1 17 CYS 17 18 18 CYS CYS A . n A 1 18 HIS 18 19 19 HIS HIS A . n A 1 19 GLN 19 20 20 GLN GLN A . n A 1 20 ILE 20 21 21 ILE ILE A . n A 1 21 GLU 21 22 22 GLU GLU A . n A 1 22 TYR 22 23 23 TYR TYR A . n A 1 23 TYR 23 24 24 TYR TYR A . n A 1 24 PHE 24 25 25 PHE PHE A . n A 1 25 GLY 25 26 26 GLY GLY A . n A 1 26 ASP 26 27 27 ASP ASP A . n A 1 27 PHE 27 28 28 PHE PHE A . n A 1 28 ASN 28 29 29 ASN ASN A . n A 1 29 LEU 29 30 30 LEU LEU A . n A 1 30 PRO 30 31 31 PRO PRO A . n A 1 31 ARG 31 32 32 ARG ARG A . n A 1 32 ASP 32 33 33 ASP ASP A . n A 1 33 LYS 33 34 34 LYS LYS A . n A 1 34 PHE 34 35 35 PHE PHE A . n A 1 35 LEU 35 36 36 LEU LEU A . n A 1 36 LYS 36 37 37 LYS LYS A . n A 1 37 GLU 37 38 38 GLU GLU A . n A 1 38 GLN 38 39 39 GLN GLN A . n A 1 39 ILE 39 40 40 ILE ILE A . n A 1 40 LYS 40 41 41 LYS LYS A . n A 1 41 LEU 41 42 42 LEU LEU A . n A 1 42 ASP 42 43 43 ASP ASP A . n A 1 43 GLU 43 44 44 GLU GLU A . n A 1 44 GLY 44 45 45 GLY GLY A . n A 1 45 TRP 45 46 46 TRP TRP A . n A 1 46 VAL 46 47 47 VAL VAL A . n A 1 47 PRO 47 48 48 PRO PRO A . n A 1 48 LEU 48 49 49 LEU LEU A . n A 1 49 GLU 49 50 50 GLU GLU A . n A 1 50 ILE 50 51 51 ILE ILE A . n A 1 51 MET 51 52 52 MET MET A . n A 1 52 ILE 52 53 53 ILE ILE A . n A 1 53 LYS 53 54 54 LYS LYS A . n A 1 54 PHE 54 55 55 PHE PHE A . n A 1 55 ASN 55 56 56 ASN ASN A . n A 1 56 ARG 56 57 57 ARG ARG A . n A 1 57 LEU 57 58 58 LEU LEU A . n A 1 58 ASN 58 59 59 ASN ASN A . n A 1 59 ARG 59 60 60 ARG ARG A . n A 1 60 LEU 60 61 61 LEU LEU A . n A 1 61 THR 61 62 62 THR THR A . n A 1 62 THR 62 63 63 THR THR A . n A 1 63 ASP 63 64 64 ASP ASP A . n A 1 64 PHE 64 65 65 PHE PHE A . n A 1 65 ASN 65 66 66 ASN ASN A . n A 1 66 VAL 66 67 67 VAL VAL A . n A 1 67 ILE 67 68 68 ILE ILE A . n A 1 68 VAL 68 69 69 VAL VAL A . n A 1 69 GLU 69 70 70 GLU GLU A . n A 1 70 ALA 70 71 71 ALA ALA A . n A 1 71 LEU 71 72 72 LEU LEU A . n A 1 72 SER 72 73 73 SER SER A . n A 1 73 LYS 73 74 74 LYS LYS A . n A 1 74 SER 74 75 75 SER SER A . n A 1 75 LYS 75 76 76 LYS LYS A . n A 1 76 ALA 76 77 77 ALA ALA A . n A 1 77 GLU 77 78 78 GLU GLU A . n A 1 78 LEU 78 79 79 LEU LEU A . n A 1 79 MET 79 80 80 MET MET A . n A 1 80 GLU 80 81 81 GLU GLU A . n A 1 81 ILE 81 82 82 ILE ILE A . n A 1 82 SER 82 83 83 SER SER A . n A 1 83 GLU 83 84 84 GLU GLU A . n A 1 84 ASP 84 85 85 ASP ASP A . n A 1 85 LYS 85 86 86 LYS LYS A . n A 1 86 THR 86 87 87 THR THR A . n A 1 87 LYS 87 88 88 LYS LYS A . n A 1 88 ILE 88 89 89 ILE ILE A . n A 1 89 ARG 89 90 90 ARG ARG A . n A 1 90 ARG 90 91 91 ARG ARG A . n A 1 91 SER 91 92 92 SER SER A . n A 1 92 PRO 92 93 93 PRO PRO A . n A 1 93 SER 93 94 94 SER SER A . n A 1 94 LYS 94 95 95 LYS LYS A . n A 1 95 PRO 95 96 96 PRO PRO A . n A 1 96 LEU 96 97 97 LEU LEU A . n A 1 97 PRO 97 98 98 PRO PRO A . n A 1 98 GLU 98 99 99 GLU GLU A . n A 1 99 VAL 99 100 100 VAL VAL A . n A 1 100 THR 100 101 101 THR THR A . n A 1 101 ASP 101 102 102 ASP ASP A . n A 1 102 GLU 102 103 103 GLU GLU A . n A 1 103 TYR 103 104 104 TYR TYR A . n A 1 104 LYS 104 105 105 LYS LYS A . n A 1 105 ASN 105 106 106 ASN ASN A . n A 1 106 ASP 106 107 107 ASP ASP A . n A 1 107 VAL 107 108 108 VAL VAL A . n A 1 108 LYS 108 109 109 LYS LYS A . n A 1 109 ASN 109 110 110 ASN ASN A . n A 1 110 ARG 110 111 111 ARG ARG A . n A 1 111 SER 111 112 112 SER SER A . n A 1 112 VAL 112 113 113 VAL VAL A . n A 1 113 TYR 113 114 114 TYR TYR A . n A 1 114 ILE 114 115 115 ILE ILE A . n A 1 115 LYS 115 116 116 LYS LYS A . n A 1 116 GLY 116 117 117 GLY GLY A . n A 1 117 PHE 117 118 118 PHE PHE A . n A 1 118 PRO 118 119 119 PRO PRO A . n A 1 119 THR 119 120 120 THR THR A . n A 1 120 ASP 120 121 121 ASP ASP A . n A 1 121 ALA 121 122 122 ALA ALA A . n A 1 122 THR 122 123 123 THR THR A . n A 1 123 LEU 123 124 124 LEU LEU A . n A 1 124 ASP 124 125 125 ASP ASP A . n A 1 125 ASP 125 126 126 ASP ASP A . n A 1 126 ILE 126 127 127 ILE ILE A . n A 1 127 LYS 127 128 128 LYS LYS A . n A 1 128 GLU 128 129 129 GLU GLU A . n A 1 129 TRP 129 130 130 TRP TRP A . n A 1 130 LEU 130 131 131 LEU LEU A . n A 1 131 GLU 131 132 132 GLU GLU A . n A 1 132 ASP 132 133 133 ASP ASP A . n A 1 133 LYS 133 134 134 LYS LYS A . n A 1 134 GLY 134 135 135 GLY GLY A . n A 1 135 GLN 135 136 136 GLN GLN A . n A 1 136 VAL 136 137 137 VAL VAL A . n A 1 137 LEU 137 138 138 LEU LEU A . n A 1 138 ASN 138 139 139 ASN ASN A . n A 1 139 ILE 139 140 140 ILE ILE A . n A 1 140 GLN 140 141 141 GLN GLN A . n A 1 141 MET 141 142 142 MET MET A . n A 1 142 ARG 142 143 143 ARG ARG A . n A 1 143 ARG 143 144 144 ARG ARG A . n A 1 144 THR 144 145 145 THR THR A . n A 1 145 LEU 145 146 146 LEU LEU A . n A 1 146 HIS 146 147 147 HIS HIS A . n A 1 147 LYS 147 148 148 LYS LYS A . n A 1 148 ALA 148 149 149 ALA ALA A . n A 1 149 PHE 149 150 150 PHE PHE A . n A 1 150 LYS 150 151 151 LYS LYS A . n A 1 151 GLY 151 152 152 GLY GLY A . n A 1 152 SER 152 153 153 SER SER A . n A 1 153 ILE 153 154 154 ILE ILE A . n A 1 154 PHE 154 155 155 PHE PHE A . n A 1 155 VAL 155 156 156 VAL VAL A . n A 1 156 VAL 156 157 157 VAL VAL A . n A 1 157 PHE 157 158 158 PHE PHE A . n A 1 158 ASP 158 159 159 ASP ASP A . n A 1 159 SER 159 160 160 SER SER A . n A 1 160 ILE 160 161 161 ILE ILE A . n A 1 161 GLU 161 162 162 GLU GLU A . n A 1 162 SER 162 163 163 SER SER A . n A 1 163 ALA 163 164 164 ALA ALA A . n A 1 164 LYS 164 165 165 LYS LYS A . n A 1 165 LYS 165 166 166 LYS LYS A . n A 1 166 PHE 166 167 167 PHE PHE A . n A 1 167 VAL 167 168 168 VAL VAL A . n A 1 168 GLU 168 169 169 GLU GLU A . n A 1 169 THR 169 170 170 THR THR A . n A 1 170 PRO 170 171 171 PRO PRO A . n A 1 171 GLY 171 172 172 GLY GLY A . n A 1 172 GLN 172 173 173 GLN GLN A . n A 1 173 LYS 173 174 174 LYS LYS A . n A 1 174 TYR 174 175 175 TYR TYR A . n A 1 175 LYS 175 176 176 LYS LYS A . n A 1 176 GLU 176 177 177 GLU GLU A . n A 1 177 THR 177 178 178 THR THR A . n A 1 178 ASP 178 179 179 ASP ASP A . n A 1 179 LEU 179 180 180 LEU LEU A . n A 1 180 LEU 180 181 181 LEU LEU A . n A 1 181 ILE 181 182 182 ILE ILE A . n A 1 182 LEU 182 183 183 LEU LEU A . n A 1 183 PHE 183 184 184 PHE PHE A . n A 1 184 LYS 184 185 185 LYS LYS A . n A 1 185 ASP 185 186 186 ASP ASP A . n A 1 186 ASP 186 187 187 ASP ASP A . n A 1 187 TYR 187 188 188 TYR TYR A . n A 1 188 PHE 188 189 189 PHE PHE A . n A 1 189 ALA 189 190 190 ALA ALA A . n A 1 190 LYS 190 191 191 LYS LYS A . n A 1 191 LYS 191 192 192 LYS LYS A . n A 1 192 ASN 192 193 ? ? ? A . n A 1 193 GLU 193 194 ? ? ? A . n B 1 1 GLY 1 2 ? ? ? B . n B 1 2 SER 2 3 ? ? ? B . n B 1 3 ASN 3 4 ? ? ? B . n B 1 4 GLY 4 5 5 GLY GLY B . n B 1 5 ASP 5 6 6 ASP ASP B . n B 1 6 ASN 6 7 7 ASN ASN B . n B 1 7 GLU 7 8 8 GLU GLU B . n B 1 8 LYS 8 9 9 LYS LYS B . n B 1 9 MET 9 10 10 MET MET B . n B 1 10 ALA 10 11 11 ALA ALA B . n B 1 11 ALA 11 12 12 ALA ALA B . n B 1 12 LEU 12 13 13 LEU LEU B . n B 1 13 GLU 13 14 14 GLU GLU B . n B 1 14 ALA 14 15 15 ALA ALA B . n B 1 15 LYS 15 16 16 LYS LYS B . n B 1 16 ILE 16 17 17 ILE ILE B . n B 1 17 CYS 17 18 18 CYS CYS B . n B 1 18 HIS 18 19 19 HIS HIS B . n B 1 19 GLN 19 20 20 GLN GLN B . n B 1 20 ILE 20 21 21 ILE ILE B . n B 1 21 GLU 21 22 22 GLU GLU B . n B 1 22 TYR 22 23 23 TYR TYR B . n B 1 23 TYR 23 24 24 TYR TYR B . n B 1 24 PHE 24 25 25 PHE PHE B . n B 1 25 GLY 25 26 26 GLY GLY B . n B 1 26 ASP 26 27 27 ASP ASP B . n B 1 27 PHE 27 28 28 PHE PHE B . n B 1 28 ASN 28 29 29 ASN ASN B . n B 1 29 LEU 29 30 30 LEU LEU B . n B 1 30 PRO 30 31 31 PRO PRO B . n B 1 31 ARG 31 32 32 ARG ARG B . n B 1 32 ASP 32 33 33 ASP ASP B . n B 1 33 LYS 33 34 34 LYS LYS B . n B 1 34 PHE 34 35 35 PHE PHE B . n B 1 35 LEU 35 36 36 LEU LEU B . n B 1 36 LYS 36 37 37 LYS LYS B . n B 1 37 GLU 37 38 38 GLU GLU B . n B 1 38 GLN 38 39 39 GLN GLN B . n B 1 39 ILE 39 40 40 ILE ILE B . n B 1 40 LYS 40 41 41 LYS LYS B . n B 1 41 LEU 41 42 42 LEU LEU B . n B 1 42 ASP 42 43 43 ASP ASP B . n B 1 43 GLU 43 44 44 GLU GLU B . n B 1 44 GLY 44 45 45 GLY GLY B . n B 1 45 TRP 45 46 46 TRP TRP B . n B 1 46 VAL 46 47 47 VAL VAL B . n B 1 47 PRO 47 48 48 PRO PRO B . n B 1 48 LEU 48 49 49 LEU LEU B . n B 1 49 GLU 49 50 50 GLU GLU B . n B 1 50 ILE 50 51 51 ILE ILE B . n B 1 51 MET 51 52 52 MET MET B . n B 1 52 ILE 52 53 53 ILE ILE B . n B 1 53 LYS 53 54 54 LYS LYS B . n B 1 54 PHE 54 55 55 PHE PHE B . n B 1 55 ASN 55 56 56 ASN ASN B . n B 1 56 ARG 56 57 57 ARG ARG B . n B 1 57 LEU 57 58 58 LEU LEU B . n B 1 58 ASN 58 59 59 ASN ASN B . n B 1 59 ARG 59 60 60 ARG ARG B . n B 1 60 LEU 60 61 61 LEU LEU B . n B 1 61 THR 61 62 62 THR THR B . n B 1 62 THR 62 63 63 THR THR B . n B 1 63 ASP 63 64 64 ASP ASP B . n B 1 64 PHE 64 65 65 PHE PHE B . n B 1 65 ASN 65 66 66 ASN ASN B . n B 1 66 VAL 66 67 67 VAL VAL B . n B 1 67 ILE 67 68 68 ILE ILE B . n B 1 68 VAL 68 69 69 VAL VAL B . n B 1 69 GLU 69 70 70 GLU GLU B . n B 1 70 ALA 70 71 71 ALA ALA B . n B 1 71 LEU 71 72 72 LEU LEU B . n B 1 72 SER 72 73 73 SER SER B . n B 1 73 LYS 73 74 74 LYS LYS B . n B 1 74 SER 74 75 75 SER SER B . n B 1 75 LYS 75 76 76 LYS LYS B . n B 1 76 ALA 76 77 77 ALA ALA B . n B 1 77 GLU 77 78 78 GLU GLU B . n B 1 78 LEU 78 79 79 LEU LEU B . n B 1 79 MET 79 80 80 MET MET B . n B 1 80 GLU 80 81 81 GLU GLU B . n B 1 81 ILE 81 82 82 ILE ILE B . n B 1 82 SER 82 83 83 SER SER B . n B 1 83 GLU 83 84 84 GLU GLU B . n B 1 84 ASP 84 85 85 ASP ASP B . n B 1 85 LYS 85 86 86 LYS LYS B . n B 1 86 THR 86 87 87 THR THR B . n B 1 87 LYS 87 88 88 LYS LYS B . n B 1 88 ILE 88 89 89 ILE ILE B . n B 1 89 ARG 89 90 90 ARG ARG B . n B 1 90 ARG 90 91 91 ARG ARG B . n B 1 91 SER 91 92 92 SER SER B . n B 1 92 PRO 92 93 93 PRO PRO B . n B 1 93 SER 93 94 94 SER SER B . n B 1 94 LYS 94 95 95 LYS LYS B . n B 1 95 PRO 95 96 96 PRO PRO B . n B 1 96 LEU 96 97 97 LEU LEU B . n B 1 97 PRO 97 98 98 PRO PRO B . n B 1 98 GLU 98 99 99 GLU GLU B . n B 1 99 VAL 99 100 100 VAL VAL B . n B 1 100 THR 100 101 101 THR THR B . n B 1 101 ASP 101 102 102 ASP ASP B . n B 1 102 GLU 102 103 103 GLU GLU B . n B 1 103 TYR 103 104 104 TYR TYR B . n B 1 104 LYS 104 105 105 LYS LYS B . n B 1 105 ASN 105 106 106 ASN ASN B . n B 1 106 ASP 106 107 107 ASP ASP B . n B 1 107 VAL 107 108 108 VAL VAL B . n B 1 108 LYS 108 109 109 LYS LYS B . n B 1 109 ASN 109 110 110 ASN ASN B . n B 1 110 ARG 110 111 111 ARG ARG B . n B 1 111 SER 111 112 112 SER SER B . n B 1 112 VAL 112 113 113 VAL VAL B . n B 1 113 TYR 113 114 114 TYR TYR B . n B 1 114 ILE 114 115 115 ILE ILE B . n B 1 115 LYS 115 116 116 LYS LYS B . n B 1 116 GLY 116 117 117 GLY GLY B . n B 1 117 PHE 117 118 118 PHE PHE B . n B 1 118 PRO 118 119 119 PRO PRO B . n B 1 119 THR 119 120 120 THR THR B . n B 1 120 ASP 120 121 121 ASP ASP B . n B 1 121 ALA 121 122 122 ALA ALA B . n B 1 122 THR 122 123 123 THR THR B . n B 1 123 LEU 123 124 124 LEU LEU B . n B 1 124 ASP 124 125 125 ASP ASP B . n B 1 125 ASP 125 126 126 ASP ASP B . n B 1 126 ILE 126 127 127 ILE ILE B . n B 1 127 LYS 127 128 128 LYS LYS B . n B 1 128 GLU 128 129 129 GLU GLU B . n B 1 129 TRP 129 130 130 TRP TRP B . n B 1 130 LEU 130 131 131 LEU LEU B . n B 1 131 GLU 131 132 132 GLU GLU B . n B 1 132 ASP 132 133 133 ASP ASP B . n B 1 133 LYS 133 134 134 LYS LYS B . n B 1 134 GLY 134 135 135 GLY GLY B . n B 1 135 GLN 135 136 136 GLN GLN B . n B 1 136 VAL 136 137 137 VAL VAL B . n B 1 137 LEU 137 138 138 LEU LEU B . n B 1 138 ASN 138 139 139 ASN ASN B . n B 1 139 ILE 139 140 140 ILE ILE B . n B 1 140 GLN 140 141 141 GLN GLN B . n B 1 141 MET 141 142 142 MET MET B . n B 1 142 ARG 142 143 143 ARG ARG B . n B 1 143 ARG 143 144 144 ARG ARG B . n B 1 144 THR 144 145 145 THR THR B . n B 1 145 LEU 145 146 146 LEU LEU B . n B 1 146 HIS 146 147 147 HIS HIS B . n B 1 147 LYS 147 148 148 LYS LYS B . n B 1 148 ALA 148 149 149 ALA ALA B . n B 1 149 PHE 149 150 150 PHE PHE B . n B 1 150 LYS 150 151 151 LYS LYS B . n B 1 151 GLY 151 152 152 GLY GLY B . n B 1 152 SER 152 153 153 SER SER B . n B 1 153 ILE 153 154 154 ILE ILE B . n B 1 154 PHE 154 155 155 PHE PHE B . n B 1 155 VAL 155 156 156 VAL VAL B . n B 1 156 VAL 156 157 157 VAL VAL B . n B 1 157 PHE 157 158 158 PHE PHE B . n B 1 158 ASP 158 159 159 ASP ASP B . n B 1 159 SER 159 160 160 SER SER B . n B 1 160 ILE 160 161 161 ILE ILE B . n B 1 161 GLU 161 162 162 GLU GLU B . n B 1 162 SER 162 163 163 SER SER B . n B 1 163 ALA 163 164 164 ALA ALA B . n B 1 164 LYS 164 165 165 LYS LYS B . n B 1 165 LYS 165 166 166 LYS LYS B . n B 1 166 PHE 166 167 167 PHE PHE B . n B 1 167 VAL 167 168 168 VAL VAL B . n B 1 168 GLU 168 169 169 GLU GLU B . n B 1 169 THR 169 170 170 THR THR B . n B 1 170 PRO 170 171 171 PRO PRO B . n B 1 171 GLY 171 172 172 GLY GLY B . n B 1 172 GLN 172 173 173 GLN GLN B . n B 1 173 LYS 173 174 174 LYS LYS B . n B 1 174 TYR 174 175 175 TYR TYR B . n B 1 175 LYS 175 176 176 LYS LYS B . n B 1 176 GLU 176 177 177 GLU GLU B . n B 1 177 THR 177 178 178 THR THR B . n B 1 178 ASP 178 179 179 ASP ASP B . n B 1 179 LEU 179 180 180 LEU LEU B . n B 1 180 LEU 180 181 181 LEU LEU B . n B 1 181 ILE 181 182 182 ILE ILE B . n B 1 182 LEU 182 183 183 LEU LEU B . n B 1 183 PHE 183 184 184 PHE PHE B . n B 1 184 LYS 184 185 185 LYS LYS B . n B 1 185 ASP 185 186 186 ASP ASP B . n B 1 186 ASP 186 187 187 ASP ASP B . n B 1 187 TYR 187 188 188 TYR TYR B . n B 1 188 PHE 188 189 189 PHE PHE B . n B 1 189 ALA 189 190 190 ALA ALA B . n B 1 190 LYS 190 191 191 LYS LYS B . n B 1 191 LYS 191 192 192 LYS LYS B . n B 1 192 ASN 192 193 ? ? ? B . n B 1 193 GLU 193 194 ? ? ? B . n C 2 1 A 1 -7 -7 A A C . n C 2 2 U 2 -6 -6 U U C . n C 2 3 A 3 -5 -5 A A C . n C 2 4 U 4 -4 -4 U U C . n C 2 5 U 5 -3 -3 U U C . n C 2 6 U 6 -2 -2 U U C . n C 2 7 U 7 -1 -1 U U C . n D 2 1 A 1 -7 -7 A A D . n D 2 2 U 2 -6 -6 U U D . n D 2 3 A 3 -5 -5 A A D . n D 2 4 U 4 -4 -4 U U D . n D 2 5 U 5 -3 -3 U U D . n D 2 6 U 6 -2 -2 U U D . n D 2 7 U 7 -1 -1 U U D . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 HOH 1 2001 2001 HOH HOH A . E 3 HOH 2 2002 2002 HOH HOH A . E 3 HOH 3 2003 2003 HOH HOH A . E 3 HOH 4 2004 2004 HOH HOH A . E 3 HOH 5 2005 2005 HOH HOH A . E 3 HOH 6 2006 2006 HOH HOH A . E 3 HOH 7 2007 2007 HOH HOH A . E 3 HOH 8 2008 2008 HOH HOH A . E 3 HOH 9 2009 2009 HOH HOH A . E 3 HOH 10 2010 2010 HOH HOH A . E 3 HOH 11 2011 2011 HOH HOH A . E 3 HOH 12 2012 2012 HOH HOH A . E 3 HOH 13 2013 2013 HOH HOH A . E 3 HOH 14 2014 2014 HOH HOH A . E 3 HOH 15 2015 2015 HOH HOH A . E 3 HOH 16 2016 2016 HOH HOH A . E 3 HOH 17 2017 2017 HOH HOH A . E 3 HOH 18 2018 2018 HOH HOH A . E 3 HOH 19 2019 2019 HOH HOH A . E 3 HOH 20 2020 2020 HOH HOH A . E 3 HOH 21 2021 2021 HOH HOH A . E 3 HOH 22 2022 2022 HOH HOH A . E 3 HOH 23 2023 2023 HOH HOH A . E 3 HOH 24 2024 2024 HOH HOH A . E 3 HOH 25 2025 2025 HOH HOH A . E 3 HOH 26 2026 2026 HOH HOH A . E 3 HOH 27 2027 2027 HOH HOH A . E 3 HOH 28 2028 2028 HOH HOH A . E 3 HOH 29 2029 2029 HOH HOH A . E 3 HOH 30 2030 2030 HOH HOH A . E 3 HOH 31 2031 2031 HOH HOH A . E 3 HOH 32 2032 2032 HOH HOH A . E 3 HOH 33 2033 2033 HOH HOH A . E 3 HOH 34 2034 2034 HOH HOH A . E 3 HOH 35 2035 2035 HOH HOH A . E 3 HOH 36 2036 2036 HOH HOH A . E 3 HOH 37 2037 2037 HOH HOH A . E 3 HOH 38 2038 2038 HOH HOH A . E 3 HOH 39 2039 2039 HOH HOH A . E 3 HOH 40 2040 2040 HOH HOH A . E 3 HOH 41 2041 2041 HOH HOH A . E 3 HOH 42 2042 2042 HOH HOH A . E 3 HOH 43 2043 2043 HOH HOH A . E 3 HOH 44 2044 2044 HOH HOH A . E 3 HOH 45 2045 2045 HOH HOH A . E 3 HOH 46 2046 2046 HOH HOH A . E 3 HOH 47 2047 2047 HOH HOH A . E 3 HOH 48 2048 2048 HOH HOH A . E 3 HOH 49 2049 2049 HOH HOH A . E 3 HOH 50 2050 2050 HOH HOH A . E 3 HOH 51 2051 2051 HOH HOH A . E 3 HOH 52 2052 2052 HOH HOH A . E 3 HOH 53 2053 2053 HOH HOH A . E 3 HOH 54 2054 2054 HOH HOH A . E 3 HOH 55 2055 2055 HOH HOH A . E 3 HOH 56 2056 2056 HOH HOH A . E 3 HOH 57 2057 2057 HOH HOH A . E 3 HOH 58 2058 2058 HOH HOH A . E 3 HOH 59 2059 2059 HOH HOH A . E 3 HOH 60 2060 2060 HOH HOH A . E 3 HOH 61 2061 2061 HOH HOH A . E 3 HOH 62 2062 2062 HOH HOH A . E 3 HOH 63 2063 2063 HOH HOH A . E 3 HOH 64 2064 2064 HOH HOH A . E 3 HOH 65 2065 2065 HOH HOH A . E 3 HOH 66 2066 2066 HOH HOH A . E 3 HOH 67 2067 2067 HOH HOH A . E 3 HOH 68 2068 2068 HOH HOH A . E 3 HOH 69 2069 2069 HOH HOH A . E 3 HOH 70 2070 2070 HOH HOH A . E 3 HOH 71 2071 2071 HOH HOH A . E 3 HOH 72 2072 2072 HOH HOH A . F 3 HOH 1 2001 2001 HOH HOH B . F 3 HOH 2 2002 2002 HOH HOH B . F 3 HOH 3 2003 2003 HOH HOH B . F 3 HOH 4 2004 2004 HOH HOH B . F 3 HOH 5 2005 2005 HOH HOH B . F 3 HOH 6 2006 2006 HOH HOH B . F 3 HOH 7 2007 2007 HOH HOH B . F 3 HOH 8 2008 2008 HOH HOH B . F 3 HOH 9 2009 2009 HOH HOH B . F 3 HOH 10 2010 2010 HOH HOH B . F 3 HOH 11 2011 2011 HOH HOH B . F 3 HOH 12 2012 2012 HOH HOH B . F 3 HOH 13 2013 2013 HOH HOH B . F 3 HOH 14 2014 2014 HOH HOH B . F 3 HOH 15 2015 2015 HOH HOH B . F 3 HOH 16 2016 2016 HOH HOH B . F 3 HOH 17 2017 2017 HOH HOH B . F 3 HOH 18 2018 2018 HOH HOH B . F 3 HOH 19 2019 2019 HOH HOH B . F 3 HOH 20 2020 2020 HOH HOH B . F 3 HOH 21 2021 2021 HOH HOH B . F 3 HOH 22 2022 2022 HOH HOH B . F 3 HOH 23 2023 2023 HOH HOH B . F 3 HOH 24 2024 2024 HOH HOH B . F 3 HOH 25 2025 2025 HOH HOH B . F 3 HOH 26 2026 2026 HOH HOH B . F 3 HOH 27 2027 2027 HOH HOH B . F 3 HOH 28 2028 2028 HOH HOH B . F 3 HOH 29 2029 2029 HOH HOH B . F 3 HOH 30 2030 2030 HOH HOH B . F 3 HOH 31 2031 2031 HOH HOH B . F 3 HOH 32 2032 2032 HOH HOH B . F 3 HOH 33 2033 2033 HOH HOH B . F 3 HOH 34 2034 2034 HOH HOH B . F 3 HOH 35 2035 2035 HOH HOH B . F 3 HOH 36 2036 2036 HOH HOH B . F 3 HOH 37 2037 2037 HOH HOH B . F 3 HOH 38 2038 2038 HOH HOH B . F 3 HOH 39 2039 2039 HOH HOH B . F 3 HOH 40 2040 2040 HOH HOH B . F 3 HOH 41 2041 2041 HOH HOH B . F 3 HOH 42 2042 2042 HOH HOH B . F 3 HOH 43 2043 2043 HOH HOH B . F 3 HOH 44 2044 2044 HOH HOH B . F 3 HOH 45 2045 2045 HOH HOH B . F 3 HOH 46 2046 2046 HOH HOH B . F 3 HOH 47 2047 2047 HOH HOH B . F 3 HOH 48 2048 2048 HOH HOH B . F 3 HOH 49 2049 2049 HOH HOH B . F 3 HOH 50 2050 2050 HOH HOH B . F 3 HOH 51 2051 2051 HOH HOH B . F 3 HOH 52 2052 2052 HOH HOH B . F 3 HOH 53 2053 2053 HOH HOH B . F 3 HOH 54 2054 2054 HOH HOH B . F 3 HOH 55 2055 2055 HOH HOH B . F 3 HOH 56 2056 2056 HOH HOH B . F 3 HOH 57 2057 2057 HOH HOH B . F 3 HOH 58 2058 2058 HOH HOH B . F 3 HOH 59 2059 2059 HOH HOH B . F 3 HOH 60 2060 2060 HOH HOH B . F 3 HOH 61 2061 2061 HOH HOH B . F 3 HOH 62 2062 2062 HOH HOH B . F 3 HOH 63 2063 2063 HOH HOH B . F 3 HOH 64 2064 2064 HOH HOH B . F 3 HOH 65 2065 2065 HOH HOH B . F 3 HOH 66 2066 2066 HOH HOH B . F 3 HOH 67 2067 2067 HOH HOH B . F 3 HOH 68 2068 2068 HOH HOH B . F 3 HOH 69 2069 2069 HOH HOH B . F 3 HOH 70 2070 2070 HOH HOH B . F 3 HOH 71 2071 2071 HOH HOH B . F 3 HOH 72 2072 2072 HOH HOH B . F 3 HOH 73 2073 2073 HOH HOH B . G 3 HOH 1 2001 2001 HOH HOH C . G 3 HOH 2 2002 2002 HOH HOH C . G 3 HOH 3 2003 2003 HOH HOH C . G 3 HOH 4 2004 2004 HOH HOH C . G 3 HOH 5 2005 2005 HOH HOH C . G 3 HOH 6 2006 2006 HOH HOH C . G 3 HOH 7 2007 2007 HOH HOH C . G 3 HOH 8 2008 2008 HOH HOH C . H 3 HOH 1 2001 2001 HOH HOH D . H 3 HOH 2 2002 2002 HOH HOH D . H 3 HOH 3 2003 2003 HOH HOH D . H 3 HOH 4 2004 2004 HOH HOH D . H 3 HOH 5 2005 2005 HOH HOH D . H 3 HOH 6 2006 2006 HOH HOH D . H 3 HOH 7 2007 2007 HOH HOH D . H 3 HOH 8 2008 2008 HOH HOH D . H 3 HOH 9 2009 2009 HOH HOH D . H 3 HOH 10 2010 2010 HOH HOH D . H 3 HOH 11 2011 2011 HOH HOH D . # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_and_software_defined_assembly PQS dimeric 2 2 author_and_software_defined_assembly PQS dimeric 2 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,C,E,G 2 1 B,D,F,H # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 1180 ? 1 MORE -4.6 ? 1 'SSA (A^2)' 14740 ? 2 'ABSA (A^2)' 1160 ? 2 MORE -2.3 ? 2 'SSA (A^2)' 14290 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2008-05-06 2 'Structure model' 1 1 2011-05-08 3 'Structure model' 1 2 2011-07-13 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal CNS refinement 1.2 ? 1 MOSFLM 'data reduction' . ? 2 SCALA 'data scaling' . ? 3 PHASER phasing 1.2 ? 4 # _pdbx_entry_details.entry_id 2VOD _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ;FIRST TWO RESIDUES ARE FROM VECTOR (GS) REMAINING SEQUENCE CORRESPONDS TO RESIDUES 4-194 ; # _pdbx_validate_rmsd_bond.id 1 _pdbx_validate_rmsd_bond.PDB_model_num 1 _pdbx_validate_rmsd_bond.auth_atom_id_1 C _pdbx_validate_rmsd_bond.auth_asym_id_1 B _pdbx_validate_rmsd_bond.auth_comp_id_1 SER _pdbx_validate_rmsd_bond.auth_seq_id_1 73 _pdbx_validate_rmsd_bond.PDB_ins_code_1 ? _pdbx_validate_rmsd_bond.label_alt_id_1 ? _pdbx_validate_rmsd_bond.auth_atom_id_2 O _pdbx_validate_rmsd_bond.auth_asym_id_2 B _pdbx_validate_rmsd_bond.auth_comp_id_2 SER _pdbx_validate_rmsd_bond.auth_seq_id_2 73 _pdbx_validate_rmsd_bond.PDB_ins_code_2 ? _pdbx_validate_rmsd_bond.label_alt_id_2 ? _pdbx_validate_rmsd_bond.bond_value 1.112 _pdbx_validate_rmsd_bond.bond_target_value 1.229 _pdbx_validate_rmsd_bond.bond_deviation -0.117 _pdbx_validate_rmsd_bond.bond_standard_deviation 0.019 _pdbx_validate_rmsd_bond.linker_flag N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 THR A 62 ? ? -179.73 149.44 2 1 GLU A 132 ? ? -60.77 0.57 3 1 ASP B 6 ? ? 155.44 101.38 4 1 GLU B 132 ? ? -20.64 -33.76 5 1 LYS B 134 ? ? -77.08 24.27 6 1 LYS B 176 ? ? 36.67 68.84 7 1 GLU B 177 ? ? 91.51 -24.50 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A LYS 76 ? CG ? A LYS 75 CG 2 1 Y 1 A LYS 76 ? CD ? A LYS 75 CD 3 1 Y 1 A LYS 76 ? CE ? A LYS 75 CE 4 1 Y 1 A LYS 76 ? NZ ? A LYS 75 NZ 5 1 Y 1 A LYS 165 ? CD ? A LYS 164 CD 6 1 Y 1 A LYS 165 ? CE ? A LYS 164 CE 7 1 Y 1 A LYS 165 ? NZ ? A LYS 164 NZ 8 1 Y 1 B GLU 70 ? CG ? B GLU 69 CG 9 1 Y 1 B GLU 70 ? CD ? B GLU 69 CD 10 1 Y 1 B GLU 70 ? OE1 ? B GLU 69 OE1 11 1 Y 1 B GLU 70 ? OE2 ? B GLU 69 OE2 12 1 Y 1 B LYS 74 ? CD ? B LYS 73 CD 13 1 Y 1 B LYS 74 ? CE ? B LYS 73 CE 14 1 Y 1 B LYS 74 ? NZ ? B LYS 73 NZ 15 1 Y 1 B GLU 78 ? CG ? B GLU 77 CG 16 1 Y 1 B GLU 78 ? CD ? B GLU 77 CD 17 1 Y 1 B GLU 78 ? OE1 ? B GLU 77 OE1 18 1 Y 1 B GLU 78 ? OE2 ? B GLU 77 OE2 19 1 Y 1 B GLU 84 ? CG ? B GLU 83 CG 20 1 Y 1 B GLU 84 ? CD ? B GLU 83 CD 21 1 Y 1 B GLU 84 ? OE1 ? B GLU 83 OE1 22 1 Y 1 B GLU 84 ? OE2 ? B GLU 83 OE2 23 1 Y 1 B LYS 86 ? CE ? B LYS 85 CE 24 1 Y 1 B LYS 86 ? NZ ? B LYS 85 NZ 25 1 Y 1 B LYS 116 ? CD ? B LYS 115 CD 26 1 Y 1 B LYS 116 ? CE ? B LYS 115 CE 27 1 Y 1 B LYS 116 ? NZ ? B LYS 115 NZ 28 1 Y 1 B LYS 148 ? CD ? B LYS 147 CD 29 1 Y 1 B LYS 148 ? CE ? B LYS 147 CE 30 1 Y 1 B LYS 148 ? NZ ? B LYS 147 NZ 31 1 Y 1 B LYS 165 ? CD ? B LYS 164 CD 32 1 Y 1 B LYS 165 ? CE ? B LYS 164 CE 33 1 Y 1 B LYS 165 ? NZ ? B LYS 164 NZ # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 2 ? A GLY 1 2 1 Y 1 A SER 3 ? A SER 2 3 1 Y 1 A ASN 4 ? A ASN 3 4 1 Y 1 A GLY 5 ? A GLY 4 5 1 Y 1 A ASN 193 ? A ASN 192 6 1 Y 1 A GLU 194 ? A GLU 193 7 1 Y 1 B GLY 2 ? B GLY 1 8 1 Y 1 B SER 3 ? B SER 2 9 1 Y 1 B ASN 4 ? B ASN 3 10 1 Y 1 B ASN 193 ? B ASN 192 11 1 Y 1 B GLU 194 ? B GLU 193 # _pdbx_entity_nonpoly.entity_id 3 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH #