data_2VVD # _entry.id 2VVD # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.279 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 2VVD PDBE EBI-36412 WWPDB D_1290036412 # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.content_type _pdbx_database_related.details PDB 2VVE unspecified 'CRYSTAL STRUCTURE OF THE STEM AND RECEPTOR BINDING DOMAIN OF THE SPIKE PROTEIN P1 FROM BACTERIOPHAGE PM2' PDB 2W0C unspecified 'X-RAY STRUCTURE OF THE ENTIRE LIPID- CONTAINING BACTERIOPHAGE PM2' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 2VVD _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.SG_entry . _pdbx_database_status.recvd_initial_deposition_date 2008-06-06 _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Abrescia, N.G.A.' 1 'Grimes, J.M.' 2 'Kivela, H.K.' 3 'Assenberg, R.' 4 'Sutton, G.C.' 5 'Butcher, S.J.' 6 'Bamford, J.K.H.' 7 'Bamford, D.H.' 8 'Stuart, D.I.' 9 # _citation.id primary _citation.title 'Insights Into Virus Evolution and Membrane Biogenesis from the Structure of the Marine Lipid-Containing Bacteriophage Pm2.' _citation.journal_abbrev Mol.Cell _citation.journal_volume 31 _citation.page_first 749 _citation.page_last ? _citation.year 2008 _citation.journal_id_ASTM MOCEFL _citation.country US _citation.journal_id_ISSN 1097-2765 _citation.journal_id_CSD 2168 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 18775333 _citation.pdbx_database_id_DOI 10.1016/J.MOLCEL.2008.06.026 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Abrescia, N.G.A.' 1 primary 'Grimes, J.M.' 2 primary 'Kivela, H.K.' 3 primary 'Assenberg, R.' 4 primary 'Sutton, G.C.' 5 primary 'Butcher, S.J.' 6 primary 'Bamford, J.K.H.' 7 primary 'Bamford, D.H.' 8 primary 'Stuart, D.I.' 9 # _cell.entry_id 2VVD _cell.length_a 43.645 _cell.length_b 49.055 _cell.length_c 72.177 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2VVD _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'SPIKE PROTEIN P1' 20165.787 1 ? ? 'RECEPTOR BINDING DOMAIN, RESIDUES 159-335' ? 2 non-polymer syn 'CALCIUM ION' 40.078 2 ? ? ? ? 3 water nat water 18.015 169 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'P1-RECEPTOR BINDING PROTEIN' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;VNYWVSDEEIRVFKEYSARAKYAQNEGRTALEANNVPFFDIDVPPELDGVPFSLKARVRHKSKGVDGLGDYTSISVKPAF YITEGDETTDTLIKYTSYGSTGSHSGYDFDDNTLDV(MSE)VTLSAGVHRVFPVETELDYDAVQEVQHDWYDESFTTFIE VYSDDPLLTVKGYAQIL(MSE)ERT ; _entity_poly.pdbx_seq_one_letter_code_can ;VNYWVSDEEIRVFKEYSARAKYAQNEGRTALEANNVPFFDIDVPPELDGVPFSLKARVRHKSKGVDGLGDYTSISVKPAF YITEGDETTDTLIKYTSYGSTGSHSGYDFDDNTLDVMVTLSAGVHRVFPVETELDYDAVQEVQHDWYDESFTTFIEVYSD DPLLTVKGYAQILMERT ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 VAL n 1 2 ASN n 1 3 TYR n 1 4 TRP n 1 5 VAL n 1 6 SER n 1 7 ASP n 1 8 GLU n 1 9 GLU n 1 10 ILE n 1 11 ARG n 1 12 VAL n 1 13 PHE n 1 14 LYS n 1 15 GLU n 1 16 TYR n 1 17 SER n 1 18 ALA n 1 19 ARG n 1 20 ALA n 1 21 LYS n 1 22 TYR n 1 23 ALA n 1 24 GLN n 1 25 ASN n 1 26 GLU n 1 27 GLY n 1 28 ARG n 1 29 THR n 1 30 ALA n 1 31 LEU n 1 32 GLU n 1 33 ALA n 1 34 ASN n 1 35 ASN n 1 36 VAL n 1 37 PRO n 1 38 PHE n 1 39 PHE n 1 40 ASP n 1 41 ILE n 1 42 ASP n 1 43 VAL n 1 44 PRO n 1 45 PRO n 1 46 GLU n 1 47 LEU n 1 48 ASP n 1 49 GLY n 1 50 VAL n 1 51 PRO n 1 52 PHE n 1 53 SER n 1 54 LEU n 1 55 LYS n 1 56 ALA n 1 57 ARG n 1 58 VAL n 1 59 ARG n 1 60 HIS n 1 61 LYS n 1 62 SER n 1 63 LYS n 1 64 GLY n 1 65 VAL n 1 66 ASP n 1 67 GLY n 1 68 LEU n 1 69 GLY n 1 70 ASP n 1 71 TYR n 1 72 THR n 1 73 SER n 1 74 ILE n 1 75 SER n 1 76 VAL n 1 77 LYS n 1 78 PRO n 1 79 ALA n 1 80 PHE n 1 81 TYR n 1 82 ILE n 1 83 THR n 1 84 GLU n 1 85 GLY n 1 86 ASP n 1 87 GLU n 1 88 THR n 1 89 THR n 1 90 ASP n 1 91 THR n 1 92 LEU n 1 93 ILE n 1 94 LYS n 1 95 TYR n 1 96 THR n 1 97 SER n 1 98 TYR n 1 99 GLY n 1 100 SER n 1 101 THR n 1 102 GLY n 1 103 SER n 1 104 HIS n 1 105 SER n 1 106 GLY n 1 107 TYR n 1 108 ASP n 1 109 PHE n 1 110 ASP n 1 111 ASP n 1 112 ASN n 1 113 THR n 1 114 LEU n 1 115 ASP n 1 116 VAL n 1 117 MSE n 1 118 VAL n 1 119 THR n 1 120 LEU n 1 121 SER n 1 122 ALA n 1 123 GLY n 1 124 VAL n 1 125 HIS n 1 126 ARG n 1 127 VAL n 1 128 PHE n 1 129 PRO n 1 130 VAL n 1 131 GLU n 1 132 THR n 1 133 GLU n 1 134 LEU n 1 135 ASP n 1 136 TYR n 1 137 ASP n 1 138 ALA n 1 139 VAL n 1 140 GLN n 1 141 GLU n 1 142 VAL n 1 143 GLN n 1 144 HIS n 1 145 ASP n 1 146 TRP n 1 147 TYR n 1 148 ASP n 1 149 GLU n 1 150 SER n 1 151 PHE n 1 152 THR n 1 153 THR n 1 154 PHE n 1 155 ILE n 1 156 GLU n 1 157 VAL n 1 158 TYR n 1 159 SER n 1 160 ASP n 1 161 ASP n 1 162 PRO n 1 163 LEU n 1 164 LEU n 1 165 THR n 1 166 VAL n 1 167 LYS n 1 168 GLY n 1 169 TYR n 1 170 ALA n 1 171 GLN n 1 172 ILE n 1 173 LEU n 1 174 MSE n 1 175 GLU n 1 176 ARG n 1 177 THR n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'PSEUDOALTEROMONAS PHAGE PM2' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 10661 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'ESCHERICHIA COLI' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain B834 _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name POPINF _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q9XJR3_BPPM2 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin ? _struct_ref.pdbx_db_accession Q9XJR3 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 2VVD _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 177 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q9XJR3 _struct_ref_seq.db_align_beg 159 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 335 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 160 _struct_ref_seq.pdbx_auth_seq_align_end 336 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CA non-polymer . 'CALCIUM ION' ? 'Ca 2' 40.078 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 2VVD _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 1.94 _exptl_crystal.density_percent_sol 36.94 _exptl_crystal.description NONE # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method ? _exptl_crystal_grow.temp ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.5 _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details '7.4MG/ML PROTEIN (IN 150MM NACL AND 20MM TRIS PH 7.5), 20%(W/V) PEG3350, 200MM CACL2' # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type MARRESEARCH _diffrn_detector.pdbx_collection_date 2005-06-22 _diffrn_detector.details MIRRORS # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol MAD _diffrn_radiation.pdbx_scattering_type x-ray # loop_ _diffrn_radiation_wavelength.id _diffrn_radiation_wavelength.wavelength _diffrn_radiation_wavelength.wt 1 0.97912 1.0 2 0.90499 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'ESRF BEAMLINE BM14' _diffrn_source.pdbx_synchrotron_site ESRF _diffrn_source.pdbx_synchrotron_beamline BM14 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.97912,0.90499 # _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.entry_id 2VVD _reflns.observed_criterion_sigma_I -3.0 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 21.60 _reflns.d_resolution_high 2.26 _reflns.number_obs 6935 _reflns.number_all ? _reflns.percent_possible_obs 90.0 _reflns.pdbx_Rmerge_I_obs 0.05 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 46.50 _reflns.B_iso_Wilson_estimate 14.65 _reflns.pdbx_redundancy 12.1 # _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_ordinal 1 _reflns_shell.d_res_high 2.26 _reflns_shell.d_res_low 2.33 _reflns_shell.percent_possible_all 52.5 _reflns_shell.Rmerge_I_obs 0.08 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 27.70 _reflns_shell.pdbx_redundancy 7.7 # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 2VVD _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 6521 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 21.60 _refine.ls_d_res_high 2.26 _refine.ls_percent_reflns_obs 89.8 _refine.ls_R_factor_obs 0.172 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.169 _refine.ls_R_factor_R_free 0.228 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.400 _refine.ls_number_reflns_R_free 369 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.939 _refine.correlation_coeff_Fo_to_Fc_free 0.886 _refine.B_iso_mean 16.30 _refine.aniso_B[1][1] -0.59000 _refine.aniso_B[2][2] 0.23000 _refine.aniso_B[3][3] 0.36000 _refine.aniso_B[1][2] 0.00000 _refine.aniso_B[1][3] 0.00000 _refine.aniso_B[2][3] 0.00000 _refine.solvent_model_details 'BABINET MODEL WITH MASK' _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.00 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS.' _refine.pdbx_starting_model NONE _refine.pdbx_method_to_determine_struct MAD _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.587 _refine.pdbx_overall_ESU_R_Free 0.257 _refine.overall_SU_ML 0.139 _refine.pdbx_overall_phase_error ? _refine.overall_SU_B 5.422 _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1284 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 2 _refine_hist.number_atoms_solvent 169 _refine_hist.number_atoms_total 1455 _refine_hist.d_res_high 2.26 _refine_hist.d_res_low 21.60 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.007 0.022 ? 1319 'X-RAY DIFFRACTION' ? r_bond_other_d 0.001 0.020 ? 861 'X-RAY DIFFRACTION' ? r_angle_refined_deg 0.966 1.950 ? 1797 'X-RAY DIFFRACTION' ? r_angle_other_deg 0.770 3.000 ? 2099 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 6.210 5.000 ? 163 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 35.875 24.627 ? 67 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 11.205 15.000 ? 205 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 17.924 15.000 ? 6 'X-RAY DIFFRACTION' ? r_chiral_restr 0.062 0.200 ? 198 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.003 0.020 ? 1496 'X-RAY DIFFRACTION' ? r_gen_planes_other 0.001 0.020 ? 277 'X-RAY DIFFRACTION' ? r_nbd_refined 0.181 0.200 ? 219 'X-RAY DIFFRACTION' ? r_nbd_other 0.188 0.200 ? 905 'X-RAY DIFFRACTION' ? r_nbtor_refined 0.175 0.200 ? 652 'X-RAY DIFFRACTION' ? r_nbtor_other 0.078 0.200 ? 685 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 0.117 0.200 ? 150 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 0.119 0.200 ? 8 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other 0.190 0.200 ? 20 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 0.120 0.200 ? 27 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 0.259 1.500 ? 832 'X-RAY DIFFRACTION' ? r_mcbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcangle_it 0.455 2.000 ? 1313 'X-RAY DIFFRACTION' ? r_mcangle_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_scbond_it 0.887 3.000 ? 560 'X-RAY DIFFRACTION' ? r_scbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_scangle_it 1.250 4.500 ? 483 'X-RAY DIFFRACTION' ? r_scangle_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_long_range_B_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_long_range_B_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 2.26 _refine_ls_shell.d_res_low 2.32 _refine_ls_shell.number_reflns_R_work 261 _refine_ls_shell.R_factor_R_work 0.1600 _refine_ls_shell.percent_reflns_obs ? _refine_ls_shell.R_factor_R_free 0.2350 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 12 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? # _struct.entry_id 2VVD _struct.title 'Crystal structure of the receptor binding domain of the spike protein P1 from bacteriophage PM2' _struct.pdbx_descriptor 'SPIKE PROTEIN P1' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2VVD _struct_keywords.pdbx_keywords 'VIRAL PROTEIN' _struct_keywords.text 'VIRAL RECEPTOR BINDING DOMAIN, VIRAL PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 2 ? D N N 3 ? # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 GLY A 27 ? ASN A 34 ? GLY A 186 ASN A 193 1 ? 8 HELX_P HELX_P2 2 PRO A 44 ? ASP A 48 ? PRO A 203 ASP A 207 5 ? 5 HELX_P HELX_P3 3 GLY A 64 ? LEU A 68 ? GLY A 223 LEU A 227 5 ? 5 HELX_P HELX_P4 4 TYR A 107 ? ASP A 111 ? TYR A 266 ASP A 270 5 ? 5 HELX_P HELX_P5 5 ASP A 135 ? GLN A 143 ? ASP A 294 GLN A 302 1 ? 9 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale1 covale ? ? A VAL 116 C ? ? ? 1_555 A MSE 117 N ? ? A VAL 275 A MSE 276 1_555 ? ? ? ? ? ? ? 1.327 ? covale2 covale ? ? A MSE 117 C ? ? ? 1_555 A VAL 118 N ? ? A MSE 276 A VAL 277 1_555 ? ? ? ? ? ? ? 1.331 ? metalc1 metalc ? ? B CA . CA ? ? ? 1_555 A SER 73 O ? ? A CA 1328 A SER 232 1_555 ? ? ? ? ? ? ? 2.380 ? metalc2 metalc ? ? B CA . CA ? ? ? 1_555 A ASP 135 OD1 ? ? A CA 1328 A ASP 294 1_555 ? ? ? ? ? ? ? 2.589 ? metalc3 metalc ? ? B CA . CA ? ? ? 1_555 A ASP 135 OD2 ? ? A CA 1328 A ASP 294 1_555 ? ? ? ? ? ? ? 2.481 ? metalc4 metalc ? ? B CA . CA ? ? ? 1_555 A ASP 137 OD2 ? ? A CA 1328 A ASP 296 1_555 ? ? ? ? ? ? ? 2.397 ? metalc5 metalc ? ? B CA . CA ? ? ? 1_555 D HOH . O ? ? A CA 1328 A HOH 2034 4_545 ? ? ? ? ? ? ? 2.362 ? metalc6 metalc ? ? B CA . CA ? ? ? 1_555 D HOH . O ? ? A CA 1328 A HOH 2068 1_555 ? ? ? ? ? ? ? 2.384 ? metalc7 metalc ? ? B CA . CA ? ? ? 1_555 D HOH . O ? ? A CA 1328 A HOH 2032 4_545 ? ? ? ? ? ? ? 2.417 ? metalc8 metalc ? ? C CA . CA ? ? ? 1_555 A ASP 7 O ? ? A CA 1329 A ASP 166 1_555 ? ? ? ? ? ? ? 2.497 ? metalc9 metalc ? ? C CA . CA ? ? ? 1_555 D HOH . O ? ? A CA 1329 A HOH 2002 1_555 ? ? ? ? ? ? ? 2.655 ? metalc10 metalc ? ? C CA . CA ? ? ? 1_555 D HOH . O ? ? A CA 1329 A HOH 2001 1_555 ? ? ? ? ? ? ? 2.296 ? metalc11 metalc ? ? C CA . CA ? ? ? 1_555 A ASP 110 OD1 ? ? A CA 1329 A ASP 269 3_755 ? ? ? ? ? ? ? 2.328 ? metalc12 metalc ? ? C CA . CA ? ? ? 1_555 D HOH . O ? ? A CA 1329 A HOH 2124 3_755 ? ? ? ? ? ? ? 2.547 ? metalc13 metalc ? ? C CA . CA ? ? ? 1_555 D HOH . O ? ? A CA 1329 A HOH 2122 3_755 ? ? ? ? ? ? ? 2.445 ? metalc14 metalc ? ? C CA . CA ? ? ? 1_555 A GLU 9 OE1 ? ? A CA 1329 A GLU 168 1_555 ? ? ? ? ? ? ? 2.631 ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? metalc ? ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA ? 4 ? AB ? 4 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA 1 2 ? anti-parallel AA 2 3 ? anti-parallel AA 3 4 ? anti-parallel AB 1 2 ? anti-parallel AB 2 3 ? anti-parallel AB 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA 1 ARG A 11 ? GLU A 15 ? ARG A 170 GLU A 174 AA 2 THR A 152 ? SER A 159 ? THR A 311 SER A 318 AA 3 PHE A 52 ? HIS A 60 ? PHE A 211 HIS A 219 AA 4 ASN A 112 ? VAL A 118 ? ASN A 271 VAL A 277 AB 1 PHE A 39 ? VAL A 43 ? PHE A 198 VAL A 202 AB 2 GLY A 123 ? GLU A 131 ? GLY A 282 GLU A 290 AB 3 PRO A 78 ? THR A 83 ? PRO A 237 THR A 242 AB 4 LEU A 92 ? TYR A 95 ? LEU A 251 TYR A 254 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA 1 2 N PHE A 13 ? N PHE A 172 O VAL A 157 ? O VAL A 316 AA 2 3 N TYR A 158 ? N TYR A 317 O LYS A 55 ? O LYS A 214 AA 3 4 N VAL A 58 ? N VAL A 217 O ASN A 112 ? O ASN A 271 AB 1 2 N VAL A 43 ? N VAL A 202 O GLY A 123 ? O GLY A 282 AB 2 3 N VAL A 130 ? N VAL A 289 O ALA A 79 ? O ALA A 238 AB 3 4 N ILE A 82 ? N ILE A 241 O ILE A 93 ? O ILE A 252 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software ? ? ? ? 6 'BINDING SITE FOR RESIDUE CA A1328' AC2 Software ? ? ? ? 7 'BINDING SITE FOR RESIDUE CA A1329' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 6 SER A 73 ? SER A 232 . ? 1_555 ? 2 AC1 6 ASP A 135 ? ASP A 294 . ? 1_555 ? 3 AC1 6 ASP A 137 ? ASP A 296 . ? 1_555 ? 4 AC1 6 HOH D . ? HOH A 2032 . ? 1_555 ? 5 AC1 6 HOH D . ? HOH A 2034 . ? 1_555 ? 6 AC1 6 HOH D . ? HOH A 2068 . ? 1_555 ? 7 AC2 7 ASP A 7 ? ASP A 166 . ? 1_555 ? 8 AC2 7 GLU A 9 ? GLU A 168 . ? 1_555 ? 9 AC2 7 ASP A 110 ? ASP A 269 . ? 1_555 ? 10 AC2 7 HOH D . ? HOH A 2001 . ? 1_555 ? 11 AC2 7 HOH D . ? HOH A 2002 . ? 1_555 ? 12 AC2 7 HOH D . ? HOH A 2122 . ? 1_555 ? 13 AC2 7 HOH D . ? HOH A 2124 . ? 1_555 ? # _database_PDB_matrix.entry_id 2VVD _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 2VVD _atom_sites.fract_transf_matrix[1][1] 0.022912 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.020385 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.013855 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C CA N O SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 VAL 1 160 ? ? ? A . n A 1 2 ASN 2 161 ? ? ? A . n A 1 3 TYR 3 162 ? ? ? A . n A 1 4 TRP 4 163 ? ? ? A . n A 1 5 VAL 5 164 ? ? ? A . n A 1 6 SER 6 165 ? ? ? A . n A 1 7 ASP 7 166 166 ASP ASP A . n A 1 8 GLU 8 167 167 GLU GLU A . n A 1 9 GLU 9 168 168 GLU GLU A . n A 1 10 ILE 10 169 169 ILE ILE A . n A 1 11 ARG 11 170 170 ARG ARG A . n A 1 12 VAL 12 171 171 VAL VAL A . n A 1 13 PHE 13 172 172 PHE PHE A . n A 1 14 LYS 14 173 173 LYS LYS A . n A 1 15 GLU 15 174 174 GLU GLU A . n A 1 16 TYR 16 175 175 TYR TYR A . n A 1 17 SER 17 176 176 SER SER A . n A 1 18 ALA 18 177 177 ALA ALA A . n A 1 19 ARG 19 178 178 ARG ARG A . n A 1 20 ALA 20 179 179 ALA ALA A . n A 1 21 LYS 21 180 180 LYS LYS A . n A 1 22 TYR 22 181 181 TYR TYR A . n A 1 23 ALA 23 182 182 ALA ALA A . n A 1 24 GLN 24 183 183 GLN GLN A . n A 1 25 ASN 25 184 184 ASN ASN A . n A 1 26 GLU 26 185 185 GLU GLU A . n A 1 27 GLY 27 186 186 GLY GLY A . n A 1 28 ARG 28 187 187 ARG ARG A . n A 1 29 THR 29 188 188 THR THR A . n A 1 30 ALA 30 189 189 ALA ALA A . n A 1 31 LEU 31 190 190 LEU LEU A . n A 1 32 GLU 32 191 191 GLU GLU A . n A 1 33 ALA 33 192 192 ALA ALA A . n A 1 34 ASN 34 193 193 ASN ASN A . n A 1 35 ASN 35 194 194 ASN ASN A . n A 1 36 VAL 36 195 195 VAL VAL A . n A 1 37 PRO 37 196 196 PRO PRO A . n A 1 38 PHE 38 197 197 PHE PHE A . n A 1 39 PHE 39 198 198 PHE PHE A . n A 1 40 ASP 40 199 199 ASP ASP A . n A 1 41 ILE 41 200 200 ILE ILE A . n A 1 42 ASP 42 201 201 ASP ASP A . n A 1 43 VAL 43 202 202 VAL VAL A . n A 1 44 PRO 44 203 203 PRO PRO A . n A 1 45 PRO 45 204 204 PRO PRO A . n A 1 46 GLU 46 205 205 GLU GLU A . n A 1 47 LEU 47 206 206 LEU LEU A . n A 1 48 ASP 48 207 207 ASP ASP A . n A 1 49 GLY 49 208 208 GLY GLY A . n A 1 50 VAL 50 209 209 VAL VAL A . n A 1 51 PRO 51 210 210 PRO PRO A . n A 1 52 PHE 52 211 211 PHE PHE A . n A 1 53 SER 53 212 212 SER SER A . n A 1 54 LEU 54 213 213 LEU LEU A . n A 1 55 LYS 55 214 214 LYS LYS A . n A 1 56 ALA 56 215 215 ALA ALA A . n A 1 57 ARG 57 216 216 ARG ARG A . n A 1 58 VAL 58 217 217 VAL VAL A . n A 1 59 ARG 59 218 218 ARG ARG A . n A 1 60 HIS 60 219 219 HIS HIS A . n A 1 61 LYS 61 220 220 LYS LYS A . n A 1 62 SER 62 221 221 SER SER A . n A 1 63 LYS 63 222 222 LYS LYS A . n A 1 64 GLY 64 223 223 GLY GLY A . n A 1 65 VAL 65 224 224 VAL VAL A . n A 1 66 ASP 66 225 225 ASP ASP A . n A 1 67 GLY 67 226 226 GLY GLY A . n A 1 68 LEU 68 227 227 LEU LEU A . n A 1 69 GLY 69 228 228 GLY GLY A . n A 1 70 ASP 70 229 229 ASP ASP A . n A 1 71 TYR 71 230 230 TYR TYR A . n A 1 72 THR 72 231 231 THR THR A . n A 1 73 SER 73 232 232 SER SER A . n A 1 74 ILE 74 233 233 ILE ILE A . n A 1 75 SER 75 234 234 SER SER A . n A 1 76 VAL 76 235 235 VAL VAL A . n A 1 77 LYS 77 236 236 LYS LYS A . n A 1 78 PRO 78 237 237 PRO PRO A . n A 1 79 ALA 79 238 238 ALA ALA A . n A 1 80 PHE 80 239 239 PHE PHE A . n A 1 81 TYR 81 240 240 TYR TYR A . n A 1 82 ILE 82 241 241 ILE ILE A . n A 1 83 THR 83 242 242 THR THR A . n A 1 84 GLU 84 243 243 GLU GLU A . n A 1 85 GLY 85 244 244 GLY GLY A . n A 1 86 ASP 86 245 245 ASP ASP A . n A 1 87 GLU 87 246 246 GLU GLU A . n A 1 88 THR 88 247 247 THR THR A . n A 1 89 THR 89 248 248 THR THR A . n A 1 90 ASP 90 249 249 ASP ASP A . n A 1 91 THR 91 250 250 THR THR A . n A 1 92 LEU 92 251 251 LEU LEU A . n A 1 93 ILE 93 252 252 ILE ILE A . n A 1 94 LYS 94 253 253 LYS LYS A . n A 1 95 TYR 95 254 254 TYR TYR A . n A 1 96 THR 96 255 255 THR THR A . n A 1 97 SER 97 256 256 SER SER A . n A 1 98 TYR 98 257 257 TYR TYR A . n A 1 99 GLY 99 258 258 GLY GLY A . n A 1 100 SER 100 259 259 SER SER A . n A 1 101 THR 101 260 260 THR THR A . n A 1 102 GLY 102 261 261 GLY GLY A . n A 1 103 SER 103 262 262 SER SER A . n A 1 104 HIS 104 263 263 HIS HIS A . n A 1 105 SER 105 264 264 SER SER A . n A 1 106 GLY 106 265 265 GLY GLY A . n A 1 107 TYR 107 266 266 TYR TYR A . n A 1 108 ASP 108 267 267 ASP ASP A . n A 1 109 PHE 109 268 268 PHE PHE A . n A 1 110 ASP 110 269 269 ASP ASP A . n A 1 111 ASP 111 270 270 ASP ASP A . n A 1 112 ASN 112 271 271 ASN ASN A . n A 1 113 THR 113 272 272 THR THR A . n A 1 114 LEU 114 273 273 LEU LEU A . n A 1 115 ASP 115 274 274 ASP ASP A . n A 1 116 VAL 116 275 275 VAL VAL A . n A 1 117 MSE 117 276 276 MSE MSE A . n A 1 118 VAL 118 277 277 VAL VAL A . n A 1 119 THR 119 278 278 THR THR A . n A 1 120 LEU 120 279 279 LEU LEU A . n A 1 121 SER 121 280 280 SER SER A . n A 1 122 ALA 122 281 281 ALA ALA A . n A 1 123 GLY 123 282 282 GLY GLY A . n A 1 124 VAL 124 283 283 VAL VAL A . n A 1 125 HIS 125 284 284 HIS HIS A . n A 1 126 ARG 126 285 285 ARG ARG A . n A 1 127 VAL 127 286 286 VAL VAL A . n A 1 128 PHE 128 287 287 PHE PHE A . n A 1 129 PRO 129 288 288 PRO PRO A . n A 1 130 VAL 130 289 289 VAL VAL A . n A 1 131 GLU 131 290 290 GLU GLU A . n A 1 132 THR 132 291 291 THR THR A . n A 1 133 GLU 133 292 292 GLU GLU A . n A 1 134 LEU 134 293 293 LEU LEU A . n A 1 135 ASP 135 294 294 ASP ASP A . n A 1 136 TYR 136 295 295 TYR TYR A . n A 1 137 ASP 137 296 296 ASP ASP A . n A 1 138 ALA 138 297 297 ALA ALA A . n A 1 139 VAL 139 298 298 VAL VAL A . n A 1 140 GLN 140 299 299 GLN GLN A . n A 1 141 GLU 141 300 300 GLU GLU A . n A 1 142 VAL 142 301 301 VAL VAL A . n A 1 143 GLN 143 302 302 GLN GLN A . n A 1 144 HIS 144 303 303 HIS HIS A . n A 1 145 ASP 145 304 304 ASP ASP A . n A 1 146 TRP 146 305 305 TRP TRP A . n A 1 147 TYR 147 306 306 TYR TYR A . n A 1 148 ASP 148 307 307 ASP ASP A . n A 1 149 GLU 149 308 308 GLU GLU A . n A 1 150 SER 150 309 309 SER SER A . n A 1 151 PHE 151 310 310 PHE PHE A . n A 1 152 THR 152 311 311 THR THR A . n A 1 153 THR 153 312 312 THR THR A . n A 1 154 PHE 154 313 313 PHE PHE A . n A 1 155 ILE 155 314 314 ILE ILE A . n A 1 156 GLU 156 315 315 GLU GLU A . n A 1 157 VAL 157 316 316 VAL VAL A . n A 1 158 TYR 158 317 317 TYR TYR A . n A 1 159 SER 159 318 318 SER SER A . n A 1 160 ASP 160 319 319 ASP ASP A . n A 1 161 ASP 161 320 320 ASP ASP A . n A 1 162 PRO 162 321 321 PRO PRO A . n A 1 163 LEU 163 322 322 LEU LEU A . n A 1 164 LEU 164 323 323 LEU LEU A . n A 1 165 THR 165 324 324 THR THR A . n A 1 166 VAL 166 325 325 VAL VAL A . n A 1 167 LYS 167 326 326 LYS LYS A . n A 1 168 GLY 168 327 327 GLY GLY A . n A 1 169 TYR 169 328 ? ? ? A . n A 1 170 ALA 170 329 ? ? ? A . n A 1 171 GLN 171 330 ? ? ? A . n A 1 172 ILE 172 331 ? ? ? A . n A 1 173 LEU 173 332 ? ? ? A . n A 1 174 MSE 174 333 ? ? ? A . n A 1 175 GLU 175 334 ? ? ? A . n A 1 176 ARG 176 335 ? ? ? A . n A 1 177 THR 177 336 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CA 1 1328 1328 CA CA A . C 2 CA 1 1329 1329 CA CA A . D 3 HOH 1 2001 2001 HOH HOH A . D 3 HOH 2 2002 2002 HOH HOH A . D 3 HOH 3 2003 2003 HOH HOH A . D 3 HOH 4 2004 2004 HOH HOH A . D 3 HOH 5 2005 2005 HOH HOH A . D 3 HOH 6 2006 2006 HOH HOH A . D 3 HOH 7 2007 2007 HOH HOH A . D 3 HOH 8 2008 2008 HOH HOH A . D 3 HOH 9 2009 2009 HOH HOH A . D 3 HOH 10 2010 2010 HOH HOH A . D 3 HOH 11 2011 2011 HOH HOH A . D 3 HOH 12 2012 2012 HOH HOH A . D 3 HOH 13 2013 2013 HOH HOH A . D 3 HOH 14 2014 2014 HOH HOH A . D 3 HOH 15 2015 2015 HOH HOH A . D 3 HOH 16 2016 2016 HOH HOH A . D 3 HOH 17 2017 2017 HOH HOH A . D 3 HOH 18 2018 2018 HOH HOH A . D 3 HOH 19 2019 2019 HOH HOH A . D 3 HOH 20 2020 2020 HOH HOH A . D 3 HOH 21 2021 2021 HOH HOH A . D 3 HOH 22 2022 2022 HOH HOH A . D 3 HOH 23 2023 2023 HOH HOH A . D 3 HOH 24 2024 2024 HOH HOH A . D 3 HOH 25 2025 2025 HOH HOH A . D 3 HOH 26 2026 2026 HOH HOH A . D 3 HOH 27 2027 2027 HOH HOH A . D 3 HOH 28 2028 2028 HOH HOH A . D 3 HOH 29 2029 2029 HOH HOH A . D 3 HOH 30 2030 2030 HOH HOH A . D 3 HOH 31 2031 2031 HOH HOH A . D 3 HOH 32 2032 2032 HOH HOH A . D 3 HOH 33 2033 2033 HOH HOH A . D 3 HOH 34 2034 2034 HOH HOH A . D 3 HOH 35 2035 2035 HOH HOH A . D 3 HOH 36 2036 2036 HOH HOH A . D 3 HOH 37 2037 2037 HOH HOH A . D 3 HOH 38 2038 2038 HOH HOH A . D 3 HOH 39 2039 2039 HOH HOH A . D 3 HOH 40 2040 2040 HOH HOH A . D 3 HOH 41 2041 2041 HOH HOH A . D 3 HOH 42 2042 2042 HOH HOH A . D 3 HOH 43 2043 2043 HOH HOH A . D 3 HOH 44 2044 2044 HOH HOH A . D 3 HOH 45 2045 2045 HOH HOH A . D 3 HOH 46 2046 2046 HOH HOH A . D 3 HOH 47 2047 2047 HOH HOH A . D 3 HOH 48 2048 2048 HOH HOH A . D 3 HOH 49 2049 2049 HOH HOH A . D 3 HOH 50 2050 2050 HOH HOH A . D 3 HOH 51 2051 2051 HOH HOH A . D 3 HOH 52 2052 2052 HOH HOH A . D 3 HOH 53 2053 2053 HOH HOH A . D 3 HOH 54 2054 2054 HOH HOH A . D 3 HOH 55 2055 2055 HOH HOH A . D 3 HOH 56 2056 2056 HOH HOH A . D 3 HOH 57 2057 2057 HOH HOH A . D 3 HOH 58 2058 2058 HOH HOH A . D 3 HOH 59 2059 2059 HOH HOH A . D 3 HOH 60 2060 2060 HOH HOH A . D 3 HOH 61 2061 2061 HOH HOH A . D 3 HOH 62 2062 2062 HOH HOH A . D 3 HOH 63 2063 2063 HOH HOH A . D 3 HOH 64 2064 2064 HOH HOH A . D 3 HOH 65 2065 2065 HOH HOH A . D 3 HOH 66 2066 2066 HOH HOH A . D 3 HOH 67 2067 2067 HOH HOH A . D 3 HOH 68 2068 2068 HOH HOH A . D 3 HOH 69 2069 2069 HOH HOH A . D 3 HOH 70 2070 2070 HOH HOH A . D 3 HOH 71 2071 2071 HOH HOH A . D 3 HOH 72 2072 2072 HOH HOH A . D 3 HOH 73 2073 2073 HOH HOH A . D 3 HOH 74 2074 2074 HOH HOH A . D 3 HOH 75 2075 2075 HOH HOH A . D 3 HOH 76 2076 2076 HOH HOH A . D 3 HOH 77 2077 2077 HOH HOH A . D 3 HOH 78 2078 2078 HOH HOH A . D 3 HOH 79 2079 2079 HOH HOH A . D 3 HOH 80 2080 2080 HOH HOH A . D 3 HOH 81 2081 2081 HOH HOH A . D 3 HOH 82 2082 2082 HOH HOH A . D 3 HOH 83 2083 2083 HOH HOH A . D 3 HOH 84 2084 2084 HOH HOH A . D 3 HOH 85 2085 2085 HOH HOH A . D 3 HOH 86 2086 2086 HOH HOH A . D 3 HOH 87 2087 2087 HOH HOH A . D 3 HOH 88 2088 2088 HOH HOH A . D 3 HOH 89 2089 2089 HOH HOH A . D 3 HOH 90 2090 2090 HOH HOH A . D 3 HOH 91 2091 2091 HOH HOH A . D 3 HOH 92 2092 2092 HOH HOH A . D 3 HOH 93 2093 2093 HOH HOH A . D 3 HOH 94 2094 2094 HOH HOH A . D 3 HOH 95 2095 2095 HOH HOH A . D 3 HOH 96 2096 2096 HOH HOH A . D 3 HOH 97 2097 2097 HOH HOH A . D 3 HOH 98 2098 2098 HOH HOH A . D 3 HOH 99 2099 2099 HOH HOH A . D 3 HOH 100 2100 2100 HOH HOH A . D 3 HOH 101 2101 2101 HOH HOH A . D 3 HOH 102 2102 2102 HOH HOH A . D 3 HOH 103 2103 2103 HOH HOH A . D 3 HOH 104 2104 2104 HOH HOH A . D 3 HOH 105 2105 2105 HOH HOH A . D 3 HOH 106 2106 2106 HOH HOH A . D 3 HOH 107 2107 2107 HOH HOH A . D 3 HOH 108 2108 2108 HOH HOH A . D 3 HOH 109 2109 2109 HOH HOH A . D 3 HOH 110 2110 2110 HOH HOH A . D 3 HOH 111 2111 2111 HOH HOH A . D 3 HOH 112 2112 2112 HOH HOH A . D 3 HOH 113 2113 2113 HOH HOH A . D 3 HOH 114 2114 2114 HOH HOH A . D 3 HOH 115 2115 2115 HOH HOH A . D 3 HOH 116 2116 2116 HOH HOH A . D 3 HOH 117 2117 2117 HOH HOH A . D 3 HOH 118 2118 2118 HOH HOH A . D 3 HOH 119 2119 2119 HOH HOH A . D 3 HOH 120 2120 2120 HOH HOH A . D 3 HOH 121 2121 2121 HOH HOH A . D 3 HOH 122 2122 2122 HOH HOH A . D 3 HOH 123 2123 2123 HOH HOH A . D 3 HOH 124 2124 2124 HOH HOH A . D 3 HOH 125 2125 2125 HOH HOH A . D 3 HOH 126 2126 2126 HOH HOH A . D 3 HOH 127 2127 2127 HOH HOH A . D 3 HOH 128 2128 2128 HOH HOH A . D 3 HOH 129 2129 2129 HOH HOH A . D 3 HOH 130 2130 2130 HOH HOH A . D 3 HOH 131 2131 2131 HOH HOH A . D 3 HOH 132 2132 2132 HOH HOH A . D 3 HOH 133 2133 2133 HOH HOH A . D 3 HOH 134 2134 2134 HOH HOH A . D 3 HOH 135 2135 2135 HOH HOH A . D 3 HOH 136 2136 2136 HOH HOH A . D 3 HOH 137 2137 2137 HOH HOH A . D 3 HOH 138 2138 2138 HOH HOH A . D 3 HOH 139 2139 2139 HOH HOH A . D 3 HOH 140 2140 2140 HOH HOH A . D 3 HOH 141 2141 2141 HOH HOH A . D 3 HOH 142 2142 2142 HOH HOH A . D 3 HOH 143 2143 2143 HOH HOH A . D 3 HOH 144 2144 2144 HOH HOH A . D 3 HOH 145 2145 2145 HOH HOH A . D 3 HOH 146 2146 2146 HOH HOH A . D 3 HOH 147 2147 2147 HOH HOH A . D 3 HOH 148 2148 2148 HOH HOH A . D 3 HOH 149 2149 2149 HOH HOH A . D 3 HOH 150 2150 2150 HOH HOH A . D 3 HOH 151 2151 2151 HOH HOH A . D 3 HOH 152 2152 2152 HOH HOH A . D 3 HOH 153 2153 2153 HOH HOH A . D 3 HOH 154 2154 2154 HOH HOH A . D 3 HOH 155 2155 2155 HOH HOH A . D 3 HOH 156 2156 2156 HOH HOH A . D 3 HOH 157 2157 2157 HOH HOH A . D 3 HOH 158 2158 2158 HOH HOH A . D 3 HOH 159 2159 2159 HOH HOH A . D 3 HOH 160 2160 2160 HOH HOH A . D 3 HOH 161 2161 2161 HOH HOH A . D 3 HOH 162 2162 2162 HOH HOH A . D 3 HOH 163 2163 2163 HOH HOH A . D 3 HOH 164 2164 2164 HOH HOH A . D 3 HOH 165 2165 2165 HOH HOH A . D 3 HOH 166 2166 2166 HOH HOH A . D 3 HOH 167 2167 2167 HOH HOH A . D 3 HOH 168 2168 2168 HOH HOH A . D 3 HOH 169 2169 2169 HOH HOH A . # _pdbx_struct_mod_residue.id 1 _pdbx_struct_mod_residue.label_asym_id A _pdbx_struct_mod_residue.label_comp_id MSE _pdbx_struct_mod_residue.label_seq_id 117 _pdbx_struct_mod_residue.auth_asym_id A _pdbx_struct_mod_residue.auth_comp_id MSE _pdbx_struct_mod_residue.auth_seq_id 276 _pdbx_struct_mod_residue.PDB_ins_code ? _pdbx_struct_mod_residue.parent_comp_id MET _pdbx_struct_mod_residue.details SELENOMETHIONINE # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PQS _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 O ? A SER 73 ? A SER 232 ? 1_555 CA ? B CA . ? A CA 1328 ? 1_555 OD1 ? A ASP 135 ? A ASP 294 ? 1_555 93.1 ? 2 O ? A SER 73 ? A SER 232 ? 1_555 CA ? B CA . ? A CA 1328 ? 1_555 OD2 ? A ASP 135 ? A ASP 294 ? 1_555 87.1 ? 3 OD1 ? A ASP 135 ? A ASP 294 ? 1_555 CA ? B CA . ? A CA 1328 ? 1_555 OD2 ? A ASP 135 ? A ASP 294 ? 1_555 51.0 ? 4 O ? A SER 73 ? A SER 232 ? 1_555 CA ? B CA . ? A CA 1328 ? 1_555 OD2 ? A ASP 137 ? A ASP 296 ? 1_555 78.3 ? 5 OD1 ? A ASP 135 ? A ASP 294 ? 1_555 CA ? B CA . ? A CA 1328 ? 1_555 OD2 ? A ASP 137 ? A ASP 296 ? 1_555 137.2 ? 6 OD2 ? A ASP 135 ? A ASP 294 ? 1_555 CA ? B CA . ? A CA 1328 ? 1_555 OD2 ? A ASP 137 ? A ASP 296 ? 1_555 86.4 ? 7 O ? A SER 73 ? A SER 232 ? 1_555 CA ? B CA . ? A CA 1328 ? 1_555 O ? D HOH . ? A HOH 2034 ? 4_545 163.8 ? 8 OD1 ? A ASP 135 ? A ASP 294 ? 1_555 CA ? B CA . ? A CA 1328 ? 1_555 O ? D HOH . ? A HOH 2034 ? 4_545 92.6 ? 9 OD2 ? A ASP 135 ? A ASP 294 ? 1_555 CA ? B CA . ? A CA 1328 ? 1_555 O ? D HOH . ? A HOH 2034 ? 4_545 84.7 ? 10 OD2 ? A ASP 137 ? A ASP 296 ? 1_555 CA ? B CA . ? A CA 1328 ? 1_555 O ? D HOH . ? A HOH 2034 ? 4_545 87.3 ? 11 O ? A SER 73 ? A SER 232 ? 1_555 CA ? B CA . ? A CA 1328 ? 1_555 O ? D HOH . ? A HOH 2068 ? 1_555 87.4 ? 12 OD1 ? A ASP 135 ? A ASP 294 ? 1_555 CA ? B CA . ? A CA 1328 ? 1_555 O ? D HOH . ? A HOH 2068 ? 1_555 80.7 ? 13 OD2 ? A ASP 135 ? A ASP 294 ? 1_555 CA ? B CA . ? A CA 1328 ? 1_555 O ? D HOH . ? A HOH 2068 ? 1_555 131.0 ? 14 OD2 ? A ASP 137 ? A ASP 296 ? 1_555 CA ? B CA . ? A CA 1328 ? 1_555 O ? D HOH . ? A HOH 2068 ? 1_555 139.4 ? 15 O ? D HOH . ? A HOH 2034 ? 4_545 CA ? B CA . ? A CA 1328 ? 1_555 O ? D HOH . ? A HOH 2068 ? 1_555 108.5 ? 16 O ? A SER 73 ? A SER 232 ? 1_555 CA ? B CA . ? A CA 1328 ? 1_555 O ? D HOH . ? A HOH 2032 ? 4_545 98.5 ? 17 OD1 ? A ASP 135 ? A ASP 294 ? 1_555 CA ? B CA . ? A CA 1328 ? 1_555 O ? D HOH . ? A HOH 2032 ? 4_545 148.2 ? 18 OD2 ? A ASP 135 ? A ASP 294 ? 1_555 CA ? B CA . ? A CA 1328 ? 1_555 O ? D HOH . ? A HOH 2032 ? 4_545 158.3 ? 19 OD2 ? A ASP 137 ? A ASP 296 ? 1_555 CA ? B CA . ? A CA 1328 ? 1_555 O ? D HOH . ? A HOH 2032 ? 4_545 74.4 ? 20 O ? D HOH . ? A HOH 2034 ? 4_545 CA ? B CA . ? A CA 1328 ? 1_555 O ? D HOH . ? A HOH 2032 ? 4_545 84.5 ? 21 O ? D HOH . ? A HOH 2068 ? 1_555 CA ? B CA . ? A CA 1328 ? 1_555 O ? D HOH . ? A HOH 2032 ? 4_545 70.4 ? 22 O ? A ASP 7 ? A ASP 166 ? 1_555 CA ? C CA . ? A CA 1329 ? 1_555 O ? D HOH . ? A HOH 2002 ? 1_555 91.3 ? 23 O ? A ASP 7 ? A ASP 166 ? 1_555 CA ? C CA . ? A CA 1329 ? 1_555 O ? D HOH . ? A HOH 2001 ? 1_555 154.0 ? 24 O ? D HOH . ? A HOH 2002 ? 1_555 CA ? C CA . ? A CA 1329 ? 1_555 O ? D HOH . ? A HOH 2001 ? 1_555 93.0 ? 25 O ? A ASP 7 ? A ASP 166 ? 1_555 CA ? C CA . ? A CA 1329 ? 1_555 OD1 ? A ASP 110 ? A ASP 269 ? 3_755 84.1 ? 26 O ? D HOH . ? A HOH 2002 ? 1_555 CA ? C CA . ? A CA 1329 ? 1_555 OD1 ? A ASP 110 ? A ASP 269 ? 3_755 140.5 ? 27 O ? D HOH . ? A HOH 2001 ? 1_555 CA ? C CA . ? A CA 1329 ? 1_555 OD1 ? A ASP 110 ? A ASP 269 ? 3_755 108.1 ? 28 O ? A ASP 7 ? A ASP 166 ? 1_555 CA ? C CA . ? A CA 1329 ? 1_555 O ? D HOH . ? A HOH 2124 ? 3_755 85.6 ? 29 O ? D HOH . ? A HOH 2002 ? 1_555 CA ? C CA . ? A CA 1329 ? 1_555 O ? D HOH . ? A HOH 2124 ? 3_755 150.5 ? 30 O ? D HOH . ? A HOH 2001 ? 1_555 CA ? C CA . ? A CA 1329 ? 1_555 O ? D HOH . ? A HOH 2124 ? 3_755 78.2 ? 31 OD1 ? A ASP 110 ? A ASP 269 ? 3_755 CA ? C CA . ? A CA 1329 ? 1_555 O ? D HOH . ? A HOH 2124 ? 3_755 68.4 ? 32 O ? A ASP 7 ? A ASP 166 ? 1_555 CA ? C CA . ? A CA 1329 ? 1_555 O ? D HOH . ? A HOH 2122 ? 3_755 122.7 ? 33 O ? D HOH . ? A HOH 2002 ? 1_555 CA ? C CA . ? A CA 1329 ? 1_555 O ? D HOH . ? A HOH 2122 ? 3_755 68.2 ? 34 O ? D HOH . ? A HOH 2001 ? 1_555 CA ? C CA . ? A CA 1329 ? 1_555 O ? D HOH . ? A HOH 2122 ? 3_755 82.6 ? 35 OD1 ? A ASP 110 ? A ASP 269 ? 3_755 CA ? C CA . ? A CA 1329 ? 1_555 O ? D HOH . ? A HOH 2122 ? 3_755 81.5 ? 36 O ? D HOH . ? A HOH 2124 ? 3_755 CA ? C CA . ? A CA 1329 ? 1_555 O ? D HOH . ? A HOH 2122 ? 3_755 136.5 ? 37 O ? A ASP 7 ? A ASP 166 ? 1_555 CA ? C CA . ? A CA 1329 ? 1_555 OE1 ? A GLU 9 ? A GLU 168 ? 1_555 72.3 ? 38 O ? D HOH . ? A HOH 2002 ? 1_555 CA ? C CA . ? A CA 1329 ? 1_555 OE1 ? A GLU 9 ? A GLU 168 ? 1_555 72.6 ? 39 O ? D HOH . ? A HOH 2001 ? 1_555 CA ? C CA . ? A CA 1329 ? 1_555 OE1 ? A GLU 9 ? A GLU 168 ? 1_555 84.6 ? 40 OD1 ? A ASP 110 ? A ASP 269 ? 3_755 CA ? C CA . ? A CA 1329 ? 1_555 OE1 ? A GLU 9 ? A GLU 168 ? 1_555 140.5 ? 41 O ? D HOH . ? A HOH 2124 ? 3_755 CA ? C CA . ? A CA 1329 ? 1_555 OE1 ? A GLU 9 ? A GLU 168 ? 1_555 78.5 ? 42 O ? D HOH . ? A HOH 2122 ? 3_755 CA ? C CA . ? A CA 1329 ? 1_555 OE1 ? A GLU 9 ? A GLU 168 ? 1_555 137.9 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2008-09-16 2 'Structure model' 1 1 2011-05-08 3 'Structure model' 1 2 2011-07-13 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal REFMAC refinement 5.2.0019 ? 1 DENZO 'data reduction' . ? 2 SCALEPACK 'data scaling' . ? 3 SOLVE phasing . ? 4 # _pdbx_entry_details.entry_id 2VVD _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details 'FRAGMENT CLONED STARTS AT RESIDUE 159 AND STOPS AT 335' # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASP A 225 ? ? 59.39 19.70 2 1 LYS A 236 ? ? -160.35 86.23 3 1 SER A 256 ? ? -144.95 -29.43 4 1 TYR A 306 ? ? 74.65 -0.60 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A ASP 166 ? CG ? A ASP 7 CG 2 1 Y 1 A ASP 166 ? OD1 ? A ASP 7 OD1 3 1 Y 1 A ASP 166 ? OD2 ? A ASP 7 OD2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A VAL 160 ? A VAL 1 2 1 Y 1 A ASN 161 ? A ASN 2 3 1 Y 1 A TYR 162 ? A TYR 3 4 1 Y 1 A TRP 163 ? A TRP 4 5 1 Y 1 A VAL 164 ? A VAL 5 6 1 Y 1 A SER 165 ? A SER 6 7 1 Y 1 A TYR 328 ? A TYR 169 8 1 Y 1 A ALA 329 ? A ALA 170 9 1 Y 1 A GLN 330 ? A GLN 171 10 1 Y 1 A ILE 331 ? A ILE 172 11 1 Y 1 A LEU 332 ? A LEU 173 12 1 Y 1 A MSE 333 ? A MSE 174 13 1 Y 1 A GLU 334 ? A GLU 175 14 1 Y 1 A ARG 335 ? A ARG 176 15 1 Y 1 A THR 336 ? A THR 177 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'CALCIUM ION' CA 3 water HOH #