data_2VY9 # _entry.id 2VY9 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.279 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 2VY9 PDBE EBI-36965 WWPDB D_1290036965 # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 2VY9 _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.SG_entry . _pdbx_database_status.recvd_initial_deposition_date 2008-07-21 _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Marles-Wright, J.' 1 'Grant, T.' 2 'Delumeau, O.' 3 'van Duinen, G.' 4 'Firbank, S.J.' 5 'Lewis, P.J.' 6 'Murray, J.W.' 7 'Newman, J.A.' 8 'Quin, M.B.' 9 'Race, P.R.' 10 'Rohou, A.' 11 'Tichelaar, W.' 12 'van Heel, M.' 13 'Lewis, R.J.' 14 # _citation.id primary _citation.title ;Molecular Architecture of the "Stressosome," a Signal Integration and Transduction Hub ; _citation.journal_abbrev Science _citation.journal_volume 322 _citation.page_first 92 _citation.page_last ? _citation.year 2008 _citation.journal_id_ASTM SCIEAS _citation.country US _citation.journal_id_ISSN 0036-8075 _citation.journal_id_CSD 0038 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 18832644 _citation.pdbx_database_id_DOI 10.1126/SCIENCE.1159572 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Marles-Wright, J.' 1 primary 'Grant, T.' 2 primary 'Delumeau, O.' 3 primary 'Van Duinen, G.' 4 primary 'Firbank, S.J.' 5 primary 'Lewis, P.J.' 6 primary 'Murray, J.W.' 7 primary 'Newman, J.A.' 8 primary 'Quin, M.B.' 9 primary 'Race, P.R.' 10 primary 'Rohou, A.' 11 primary 'Tichelaar, W.' 12 primary 'Van Heel, M.' 13 primary 'Lewis, R.J.' 14 # _cell.entry_id 2VY9 _cell.length_a 51.081 _cell.length_b 60.418 _cell.length_c 89.329 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2VY9 _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'ANTI-SIGMA-FACTOR ANTAGONIST' 13768.546 2 ? ? ? ? 2 water nat water 18.015 42 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'MTS, STAS DOMAIN PROTEIN' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;(MSE)SSRVPILKVDDYWVVAIEETLHDQSVIQFKEELLHNITGVAGKGLVIDISALEVVDSFVTRVLIEISRLAELLGL PFVLTGIKPAVAITLTE(MSE)GLDLRG(MSE)ATALNLQKGLDKLKNLAR(MSE)EQR ; _entity_poly.pdbx_seq_one_letter_code_can ;MSSRVPILKVDDYWVVAIEETLHDQSVIQFKEELLHNITGVAGKGLVIDISALEVVDSFVTRVLIEISRLAELLGLPFVL TGIKPAVAITLTEMGLDLRGMATALNLQKGLDKLKNLARMEQR ; _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MSE n 1 2 SER n 1 3 SER n 1 4 ARG n 1 5 VAL n 1 6 PRO n 1 7 ILE n 1 8 LEU n 1 9 LYS n 1 10 VAL n 1 11 ASP n 1 12 ASP n 1 13 TYR n 1 14 TRP n 1 15 VAL n 1 16 VAL n 1 17 ALA n 1 18 ILE n 1 19 GLU n 1 20 GLU n 1 21 THR n 1 22 LEU n 1 23 HIS n 1 24 ASP n 1 25 GLN n 1 26 SER n 1 27 VAL n 1 28 ILE n 1 29 GLN n 1 30 PHE n 1 31 LYS n 1 32 GLU n 1 33 GLU n 1 34 LEU n 1 35 LEU n 1 36 HIS n 1 37 ASN n 1 38 ILE n 1 39 THR n 1 40 GLY n 1 41 VAL n 1 42 ALA n 1 43 GLY n 1 44 LYS n 1 45 GLY n 1 46 LEU n 1 47 VAL n 1 48 ILE n 1 49 ASP n 1 50 ILE n 1 51 SER n 1 52 ALA n 1 53 LEU n 1 54 GLU n 1 55 VAL n 1 56 VAL n 1 57 ASP n 1 58 SER n 1 59 PHE n 1 60 VAL n 1 61 THR n 1 62 ARG n 1 63 VAL n 1 64 LEU n 1 65 ILE n 1 66 GLU n 1 67 ILE n 1 68 SER n 1 69 ARG n 1 70 LEU n 1 71 ALA n 1 72 GLU n 1 73 LEU n 1 74 LEU n 1 75 GLY n 1 76 LEU n 1 77 PRO n 1 78 PHE n 1 79 VAL n 1 80 LEU n 1 81 THR n 1 82 GLY n 1 83 ILE n 1 84 LYS n 1 85 PRO n 1 86 ALA n 1 87 VAL n 1 88 ALA n 1 89 ILE n 1 90 THR n 1 91 LEU n 1 92 THR n 1 93 GLU n 1 94 MSE n 1 95 GLY n 1 96 LEU n 1 97 ASP n 1 98 LEU n 1 99 ARG n 1 100 GLY n 1 101 MSE n 1 102 ALA n 1 103 THR n 1 104 ALA n 1 105 LEU n 1 106 ASN n 1 107 LEU n 1 108 GLN n 1 109 LYS n 1 110 GLY n 1 111 LEU n 1 112 ASP n 1 113 LYS n 1 114 LEU n 1 115 LYS n 1 116 ASN n 1 117 LEU n 1 118 ALA n 1 119 ARG n 1 120 MSE n 1 121 GLU n 1 122 GLN n 1 123 ARG n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'MOORELLA THERMOACETICA' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 1525 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc 39073 _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'ESCHERICHIA COLI' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain B834 _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name PET24A _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description DSM # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q2RIF5_MOOTA _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin ? _struct_ref.pdbx_db_accession Q2RIF5 _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 2VY9 A 1 ? 123 ? Q2RIF5 1 ? 123 ? 1 123 2 1 2VY9 B 1 ? 123 ? Q2RIF5 1 ? 123 ? 1 123 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 2VY9 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.72 _exptl_crystal.density_percent_sol 54.4 _exptl_crystal.description NONE # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method ? _exptl_crystal_grow.temp ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 6.5 _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details '0.2 M POTASSIUM THIOCYANATE, 0.1 M BIS-TRIS PROPANE PH 6.5, 20%(W/V) PEG 3350' # _diffrn.id 1 _diffrn.ambient_temp 287 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC CCD' _diffrn_detector.pdbx_collection_date 2007-11-17 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9699 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'DIAMOND BEAMLINE I04' _diffrn_source.pdbx_synchrotron_site Diamond _diffrn_source.pdbx_synchrotron_beamline I04 _diffrn_source.pdbx_wavelength 0.9699 _diffrn_source.pdbx_wavelength_list ? # _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.entry_id 2VY9 _reflns.observed_criterion_sigma_I 1.5 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 19.10 _reflns.d_resolution_high 2.30 _reflns.number_obs 12304 _reflns.number_all ? _reflns.percent_possible_obs 97.2 _reflns.pdbx_Rmerge_I_obs 0.08 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 11.10 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 3.4 # _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_ordinal 1 _reflns_shell.d_res_high 2.30 _reflns_shell.d_res_low 2.42 _reflns_shell.percent_possible_all 98.8 _reflns_shell.Rmerge_I_obs 0.54 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 2.10 _reflns_shell.pdbx_redundancy 3.5 # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 2VY9 _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag 'LIKELY RESIDUAL' _refine.ls_number_reflns_obs 11710 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 19.06 _refine.ls_d_res_high 2.30 _refine.ls_percent_reflns_obs 96.3 _refine.ls_R_factor_obs 0.228 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.226 _refine.ls_R_factor_R_free 0.280 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 4.800 _refine.ls_number_reflns_R_free 593 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.935 _refine.correlation_coeff_Fo_to_Fc_free 0.921 _refine.B_iso_mean 23.17 _refine.aniso_B[1][1] 0.49000 _refine.aniso_B[2][2] 0.31000 _refine.aniso_B[3][3] -0.80000 _refine.aniso_B[1][2] 0.00000 _refine.aniso_B[1][3] 0.00000 _refine.aniso_B[2][3] 0.00000 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS. U VALUES RESIDUAL ONLY' _refine.pdbx_starting_model NONE _refine.pdbx_method_to_determine_struct SAD _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.341 _refine.pdbx_overall_ESU_R_Free 0.261 _refine.overall_SU_ML 0.220 _refine.pdbx_overall_phase_error ? _refine.overall_SU_B 21.491 _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1768 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 42 _refine_hist.number_atoms_total 1810 _refine_hist.d_res_high 2.30 _refine_hist.d_res_low 19.06 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.012 0.022 ? 1788 'X-RAY DIFFRACTION' ? r_bond_other_d ? ? ? ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.458 1.999 ? 2422 'X-RAY DIFFRACTION' ? r_angle_other_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 5.509 5.000 ? 228 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 31.999 25.313 ? 64 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 16.536 15.000 ? 342 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 16.784 15.000 ? 8 'X-RAY DIFFRACTION' ? r_chiral_restr 0.089 0.200 ? 312 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.005 0.020 ? 1238 'X-RAY DIFFRACTION' ? r_gen_planes_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 0.636 1.500 ? 1138 'X-RAY DIFFRACTION' ? r_mcbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcangle_it 1.209 2.000 ? 1842 'X-RAY DIFFRACTION' ? r_mcangle_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_scbond_it 2.035 3.000 ? 650 'X-RAY DIFFRACTION' ? r_scbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_scangle_it 3.175 4.500 ? 580 'X-RAY DIFFRACTION' ? r_scangle_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_long_range_B_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_long_range_B_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 2.30 _refine_ls_shell.d_res_low 2.36 _refine_ls_shell.number_reflns_R_work 841 _refine_ls_shell.R_factor_R_work 0.3220 _refine_ls_shell.percent_reflns_obs ? _refine_ls_shell.R_factor_R_free 0.4240 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 51 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? # _struct.entry_id 2VY9 _struct.title 'Molecular architecture of the stressosome, a signal integration and transduction hub' _struct.pdbx_descriptor 'ANTI-SIGMA-FACTOR ANTAGONIST' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2VY9 _struct_keywords.pdbx_keywords 'GENE REGULATION' _struct_keywords.text 'MOORELLA THERMOACETICA, GENE REGULATION, RSBS, STRESSOSOME, STAS DOMAIN, BACILLUS SUBTILIS' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 2 ? # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ASP A 24 ? THR A 39 ? ASP A 24 THR A 39 1 ? 16 HELX_P HELX_P2 2 ASP A 57 ? LEU A 74 ? ASP A 57 LEU A 74 1 ? 18 HELX_P HELX_P3 3 LYS A 84 ? MSE A 94 ? LYS A 84 MSE A 94 1 ? 11 HELX_P HELX_P4 4 ASN A 106 ? ALA A 118 ? ASN A 106 ALA A 118 1 ? 13 HELX_P HELX_P5 5 THR B 21 ? GLN B 25 ? THR B 21 GLN B 25 5 ? 5 HELX_P HELX_P6 6 SER B 26 ? THR B 39 ? SER B 26 THR B 39 1 ? 14 HELX_P HELX_P7 7 ASP B 57 ? LEU B 74 ? ASP B 57 LEU B 74 1 ? 18 HELX_P HELX_P8 8 LYS B 84 ? MSE B 94 ? LYS B 84 MSE B 94 1 ? 11 HELX_P HELX_P9 9 ASP B 97 ? MSE B 101 ? ASP B 97 MSE B 101 5 ? 5 HELX_P HELX_P10 10 ASN B 106 ? ALA B 118 ? ASN B 106 ALA B 118 1 ? 13 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale1 covale ? ? A GLU 93 C ? ? ? 1_555 A MSE 94 N ? ? A GLU 93 A MSE 94 1_555 ? ? ? ? ? ? ? 1.313 ? covale2 covale ? ? A MSE 94 C ? ? ? 1_555 A GLY 95 N ? ? A MSE 94 A GLY 95 1_555 ? ? ? ? ? ? ? 1.331 ? covale3 covale ? ? A GLY 100 C ? ? ? 1_555 A MSE 101 N ? ? A GLY 100 A MSE 101 1_555 ? ? ? ? ? ? ? 1.318 ? covale4 covale ? ? A MSE 101 C ? ? ? 1_555 A ALA 102 N ? ? A MSE 101 A ALA 102 1_555 ? ? ? ? ? ? ? 1.325 ? covale5 covale ? ? A ARG 119 C ? ? ? 1_555 A MSE 120 N ? ? A ARG 119 A MSE 120 1_555 ? ? ? ? ? ? ? 1.327 ? covale6 covale ? ? B GLU 93 C ? ? ? 1_555 B MSE 94 N ? ? B GLU 93 B MSE 94 1_555 ? ? ? ? ? ? ? 1.326 ? covale7 covale ? ? B MSE 94 C ? ? ? 1_555 B GLY 95 N ? ? B MSE 94 B GLY 95 1_555 ? ? ? ? ? ? ? 1.334 ? covale8 covale ? ? B GLY 100 C ? ? ? 1_555 B MSE 101 N ? ? B GLY 100 B MSE 101 1_555 ? ? ? ? ? ? ? 1.320 ? covale9 covale ? ? B MSE 101 C ? ? ? 1_555 B ALA 102 N ? ? B MSE 101 B ALA 102 1_555 ? ? ? ? ? ? ? 1.331 ? covale10 covale ? ? B ARG 119 C ? ? ? 1_555 B MSE 120 N ? ? B ARG 119 B MSE 120 1_555 ? ? ? ? ? ? ? 1.330 ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA ? 5 ? BA ? 5 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA 1 2 ? anti-parallel AA 2 3 ? parallel AA 3 4 ? parallel AA 4 5 ? parallel BA 1 2 ? anti-parallel BA 2 3 ? parallel BA 3 4 ? parallel BA 4 5 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA 1 LEU A 8 ? VAL A 10 ? LEU A 8 VAL A 10 AA 2 TYR A 13 ? ALA A 17 ? TYR A 13 ALA A 17 AA 3 GLY A 45 ? ASP A 49 ? GLY A 45 ASP A 49 AA 4 PHE A 78 ? THR A 81 ? PHE A 78 THR A 81 AA 5 ALA A 102 ? ALA A 104 ? ALA A 102 ALA A 104 BA 1 LEU B 8 ? VAL B 10 ? LEU B 8 VAL B 10 BA 2 TYR B 13 ? ALA B 17 ? TYR B 13 ALA B 17 BA 3 GLY B 45 ? ASP B 49 ? GLY B 45 ASP B 49 BA 4 PHE B 78 ? THR B 81 ? PHE B 78 THR B 81 BA 5 ALA B 102 ? ALA B 104 ? ALA B 102 ALA B 104 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA 1 2 N VAL A 10 ? N VAL A 10 O TYR A 13 ? O TYR A 13 AA 2 3 N TRP A 14 ? N TRP A 14 O GLY A 45 ? O GLY A 45 AA 3 4 N ILE A 48 ? N ILE A 48 O VAL A 79 ? O VAL A 79 AA 4 5 N LEU A 80 ? N LEU A 80 O ALA A 102 ? O ALA A 102 BA 1 2 N VAL B 10 ? N VAL B 10 O TYR B 13 ? O TYR B 13 BA 2 3 N TRP B 14 ? N TRP B 14 O GLY B 45 ? O GLY B 45 BA 3 4 N ILE B 48 ? N ILE B 48 O VAL B 79 ? O VAL B 79 BA 4 5 N LEU B 80 ? N LEU B 80 O ALA B 102 ? O ALA B 102 # _database_PDB_matrix.entry_id 2VY9 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 2VY9 _atom_sites.fract_transf_matrix[1][1] 0.019577 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.016551 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.011195 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MSE 1 1 ? ? ? A . n A 1 2 SER 2 2 ? ? ? A . n A 1 3 SER 3 3 ? ? ? A . n A 1 4 ARG 4 4 ? ? ? A . n A 1 5 VAL 5 5 ? ? ? A . n A 1 6 PRO 6 6 6 PRO PRO A . n A 1 7 ILE 7 7 7 ILE ILE A . n A 1 8 LEU 8 8 8 LEU LEU A . n A 1 9 LYS 9 9 9 LYS LYS A . n A 1 10 VAL 10 10 10 VAL VAL A . n A 1 11 ASP 11 11 11 ASP ASP A . n A 1 12 ASP 12 12 12 ASP ASP A . n A 1 13 TYR 13 13 13 TYR TYR A . n A 1 14 TRP 14 14 14 TRP TRP A . n A 1 15 VAL 15 15 15 VAL VAL A . n A 1 16 VAL 16 16 16 VAL VAL A . n A 1 17 ALA 17 17 17 ALA ALA A . n A 1 18 ILE 18 18 18 ILE ILE A . n A 1 19 GLU 19 19 19 GLU GLU A . n A 1 20 GLU 20 20 20 GLU GLU A . n A 1 21 THR 21 21 21 THR THR A . n A 1 22 LEU 22 22 22 LEU LEU A . n A 1 23 HIS 23 23 23 HIS HIS A . n A 1 24 ASP 24 24 24 ASP ASP A . n A 1 25 GLN 25 25 25 GLN GLN A . n A 1 26 SER 26 26 26 SER SER A . n A 1 27 VAL 27 27 27 VAL VAL A . n A 1 28 ILE 28 28 28 ILE ILE A . n A 1 29 GLN 29 29 29 GLN GLN A . n A 1 30 PHE 30 30 30 PHE PHE A . n A 1 31 LYS 31 31 31 LYS LYS A . n A 1 32 GLU 32 32 32 GLU GLU A . n A 1 33 GLU 33 33 33 GLU GLU A . n A 1 34 LEU 34 34 34 LEU LEU A . n A 1 35 LEU 35 35 35 LEU LEU A . n A 1 36 HIS 36 36 36 HIS HIS A . n A 1 37 ASN 37 37 37 ASN ASN A . n A 1 38 ILE 38 38 38 ILE ILE A . n A 1 39 THR 39 39 39 THR THR A . n A 1 40 GLY 40 40 40 GLY GLY A . n A 1 41 VAL 41 41 41 VAL VAL A . n A 1 42 ALA 42 42 42 ALA ALA A . n A 1 43 GLY 43 43 43 GLY GLY A . n A 1 44 LYS 44 44 44 LYS LYS A . n A 1 45 GLY 45 45 45 GLY GLY A . n A 1 46 LEU 46 46 46 LEU LEU A . n A 1 47 VAL 47 47 47 VAL VAL A . n A 1 48 ILE 48 48 48 ILE ILE A . n A 1 49 ASP 49 49 49 ASP ASP A . n A 1 50 ILE 50 50 50 ILE ILE A . n A 1 51 SER 51 51 51 SER SER A . n A 1 52 ALA 52 52 52 ALA ALA A . n A 1 53 LEU 53 53 53 LEU LEU A . n A 1 54 GLU 54 54 54 GLU GLU A . n A 1 55 VAL 55 55 55 VAL VAL A . n A 1 56 VAL 56 56 56 VAL VAL A . n A 1 57 ASP 57 57 57 ASP ASP A . n A 1 58 SER 58 58 58 SER SER A . n A 1 59 PHE 59 59 59 PHE PHE A . n A 1 60 VAL 60 60 60 VAL VAL A . n A 1 61 THR 61 61 61 THR THR A . n A 1 62 ARG 62 62 62 ARG ARG A . n A 1 63 VAL 63 63 63 VAL VAL A . n A 1 64 LEU 64 64 64 LEU LEU A . n A 1 65 ILE 65 65 65 ILE ILE A . n A 1 66 GLU 66 66 66 GLU GLU A . n A 1 67 ILE 67 67 67 ILE ILE A . n A 1 68 SER 68 68 68 SER SER A . n A 1 69 ARG 69 69 69 ARG ARG A . n A 1 70 LEU 70 70 70 LEU LEU A . n A 1 71 ALA 71 71 71 ALA ALA A . n A 1 72 GLU 72 72 72 GLU GLU A . n A 1 73 LEU 73 73 73 LEU LEU A . n A 1 74 LEU 74 74 74 LEU LEU A . n A 1 75 GLY 75 75 75 GLY GLY A . n A 1 76 LEU 76 76 76 LEU LEU A . n A 1 77 PRO 77 77 77 PRO PRO A . n A 1 78 PHE 78 78 78 PHE PHE A . n A 1 79 VAL 79 79 79 VAL VAL A . n A 1 80 LEU 80 80 80 LEU LEU A . n A 1 81 THR 81 81 81 THR THR A . n A 1 82 GLY 82 82 82 GLY GLY A . n A 1 83 ILE 83 83 83 ILE ILE A . n A 1 84 LYS 84 84 84 LYS LYS A . n A 1 85 PRO 85 85 85 PRO PRO A . n A 1 86 ALA 86 86 86 ALA ALA A . n A 1 87 VAL 87 87 87 VAL VAL A . n A 1 88 ALA 88 88 88 ALA ALA A . n A 1 89 ILE 89 89 89 ILE ILE A . n A 1 90 THR 90 90 90 THR THR A . n A 1 91 LEU 91 91 91 LEU LEU A . n A 1 92 THR 92 92 92 THR THR A . n A 1 93 GLU 93 93 93 GLU GLU A . n A 1 94 MSE 94 94 94 MSE MSE A . n A 1 95 GLY 95 95 95 GLY GLY A . n A 1 96 LEU 96 96 96 LEU LEU A . n A 1 97 ASP 97 97 97 ASP ASP A . n A 1 98 LEU 98 98 98 LEU LEU A . n A 1 99 ARG 99 99 99 ARG ARG A . n A 1 100 GLY 100 100 100 GLY GLY A . n A 1 101 MSE 101 101 101 MSE MSE A . n A 1 102 ALA 102 102 102 ALA ALA A . n A 1 103 THR 103 103 103 THR THR A . n A 1 104 ALA 104 104 104 ALA ALA A . n A 1 105 LEU 105 105 105 LEU LEU A . n A 1 106 ASN 106 106 106 ASN ASN A . n A 1 107 LEU 107 107 107 LEU LEU A . n A 1 108 GLN 108 108 108 GLN GLN A . n A 1 109 LYS 109 109 109 LYS LYS A . n A 1 110 GLY 110 110 110 GLY GLY A . n A 1 111 LEU 111 111 111 LEU LEU A . n A 1 112 ASP 112 112 112 ASP ASP A . n A 1 113 LYS 113 113 113 LYS LYS A . n A 1 114 LEU 114 114 114 LEU LEU A . n A 1 115 LYS 115 115 115 LYS LYS A . n A 1 116 ASN 116 116 116 ASN ASN A . n A 1 117 LEU 117 117 117 LEU LEU A . n A 1 118 ALA 118 118 118 ALA ALA A . n A 1 119 ARG 119 119 119 ARG ARG A . n A 1 120 MSE 120 120 120 MSE MSE A . n A 1 121 GLU 121 121 ? ? ? A . n A 1 122 GLN 122 122 ? ? ? A . n A 1 123 ARG 123 123 ? ? ? A . n B 1 1 MSE 1 1 ? ? ? B . n B 1 2 SER 2 2 ? ? ? B . n B 1 3 SER 3 3 ? ? ? B . n B 1 4 ARG 4 4 ? ? ? B . n B 1 5 VAL 5 5 ? ? ? B . n B 1 6 PRO 6 6 6 PRO PRO B . n B 1 7 ILE 7 7 7 ILE ILE B . n B 1 8 LEU 8 8 8 LEU LEU B . n B 1 9 LYS 9 9 9 LYS LYS B . n B 1 10 VAL 10 10 10 VAL VAL B . n B 1 11 ASP 11 11 11 ASP ASP B . n B 1 12 ASP 12 12 12 ASP ASP B . n B 1 13 TYR 13 13 13 TYR TYR B . n B 1 14 TRP 14 14 14 TRP TRP B . n B 1 15 VAL 15 15 15 VAL VAL B . n B 1 16 VAL 16 16 16 VAL VAL B . n B 1 17 ALA 17 17 17 ALA ALA B . n B 1 18 ILE 18 18 18 ILE ILE B . n B 1 19 GLU 19 19 19 GLU GLU B . n B 1 20 GLU 20 20 20 GLU GLU B . n B 1 21 THR 21 21 21 THR THR B . n B 1 22 LEU 22 22 22 LEU LEU B . n B 1 23 HIS 23 23 23 HIS HIS B . n B 1 24 ASP 24 24 24 ASP ASP B . n B 1 25 GLN 25 25 25 GLN GLN B . n B 1 26 SER 26 26 26 SER SER B . n B 1 27 VAL 27 27 27 VAL VAL B . n B 1 28 ILE 28 28 28 ILE ILE B . n B 1 29 GLN 29 29 29 GLN GLN B . n B 1 30 PHE 30 30 30 PHE PHE B . n B 1 31 LYS 31 31 31 LYS LYS B . n B 1 32 GLU 32 32 32 GLU GLU B . n B 1 33 GLU 33 33 33 GLU GLU B . n B 1 34 LEU 34 34 34 LEU LEU B . n B 1 35 LEU 35 35 35 LEU LEU B . n B 1 36 HIS 36 36 36 HIS HIS B . n B 1 37 ASN 37 37 37 ASN ASN B . n B 1 38 ILE 38 38 38 ILE ILE B . n B 1 39 THR 39 39 39 THR THR B . n B 1 40 GLY 40 40 40 GLY GLY B . n B 1 41 VAL 41 41 41 VAL VAL B . n B 1 42 ALA 42 42 42 ALA ALA B . n B 1 43 GLY 43 43 43 GLY GLY B . n B 1 44 LYS 44 44 44 LYS LYS B . n B 1 45 GLY 45 45 45 GLY GLY B . n B 1 46 LEU 46 46 46 LEU LEU B . n B 1 47 VAL 47 47 47 VAL VAL B . n B 1 48 ILE 48 48 48 ILE ILE B . n B 1 49 ASP 49 49 49 ASP ASP B . n B 1 50 ILE 50 50 50 ILE ILE B . n B 1 51 SER 51 51 51 SER SER B . n B 1 52 ALA 52 52 52 ALA ALA B . n B 1 53 LEU 53 53 53 LEU LEU B . n B 1 54 GLU 54 54 54 GLU GLU B . n B 1 55 VAL 55 55 55 VAL VAL B . n B 1 56 VAL 56 56 56 VAL VAL B . n B 1 57 ASP 57 57 57 ASP ASP B . n B 1 58 SER 58 58 58 SER SER B . n B 1 59 PHE 59 59 59 PHE PHE B . n B 1 60 VAL 60 60 60 VAL VAL B . n B 1 61 THR 61 61 61 THR THR B . n B 1 62 ARG 62 62 62 ARG ARG B . n B 1 63 VAL 63 63 63 VAL VAL B . n B 1 64 LEU 64 64 64 LEU LEU B . n B 1 65 ILE 65 65 65 ILE ILE B . n B 1 66 GLU 66 66 66 GLU GLU B . n B 1 67 ILE 67 67 67 ILE ILE B . n B 1 68 SER 68 68 68 SER SER B . n B 1 69 ARG 69 69 69 ARG ARG B . n B 1 70 LEU 70 70 70 LEU LEU B . n B 1 71 ALA 71 71 71 ALA ALA B . n B 1 72 GLU 72 72 72 GLU GLU B . n B 1 73 LEU 73 73 73 LEU LEU B . n B 1 74 LEU 74 74 74 LEU LEU B . n B 1 75 GLY 75 75 75 GLY GLY B . n B 1 76 LEU 76 76 76 LEU LEU B . n B 1 77 PRO 77 77 77 PRO PRO B . n B 1 78 PHE 78 78 78 PHE PHE B . n B 1 79 VAL 79 79 79 VAL VAL B . n B 1 80 LEU 80 80 80 LEU LEU B . n B 1 81 THR 81 81 81 THR THR B . n B 1 82 GLY 82 82 82 GLY GLY B . n B 1 83 ILE 83 83 83 ILE ILE B . n B 1 84 LYS 84 84 84 LYS LYS B . n B 1 85 PRO 85 85 85 PRO PRO B . n B 1 86 ALA 86 86 86 ALA ALA B . n B 1 87 VAL 87 87 87 VAL VAL B . n B 1 88 ALA 88 88 88 ALA ALA B . n B 1 89 ILE 89 89 89 ILE ILE B . n B 1 90 THR 90 90 90 THR THR B . n B 1 91 LEU 91 91 91 LEU LEU B . n B 1 92 THR 92 92 92 THR THR B . n B 1 93 GLU 93 93 93 GLU GLU B . n B 1 94 MSE 94 94 94 MSE MSE B . n B 1 95 GLY 95 95 95 GLY GLY B . n B 1 96 LEU 96 96 96 LEU LEU B . n B 1 97 ASP 97 97 97 ASP ASP B . n B 1 98 LEU 98 98 98 LEU LEU B . n B 1 99 ARG 99 99 99 ARG ARG B . n B 1 100 GLY 100 100 100 GLY GLY B . n B 1 101 MSE 101 101 101 MSE MSE B . n B 1 102 ALA 102 102 102 ALA ALA B . n B 1 103 THR 103 103 103 THR THR B . n B 1 104 ALA 104 104 104 ALA ALA B . n B 1 105 LEU 105 105 105 LEU LEU B . n B 1 106 ASN 106 106 106 ASN ASN B . n B 1 107 LEU 107 107 107 LEU LEU B . n B 1 108 GLN 108 108 108 GLN GLN B . n B 1 109 LYS 109 109 109 LYS LYS B . n B 1 110 GLY 110 110 110 GLY GLY B . n B 1 111 LEU 111 111 111 LEU LEU B . n B 1 112 ASP 112 112 112 ASP ASP B . n B 1 113 LYS 113 113 113 LYS LYS B . n B 1 114 LEU 114 114 114 LEU LEU B . n B 1 115 LYS 115 115 115 LYS LYS B . n B 1 116 ASN 116 116 116 ASN ASN B . n B 1 117 LEU 117 117 117 LEU LEU B . n B 1 118 ALA 118 118 118 ALA ALA B . n B 1 119 ARG 119 119 119 ARG ARG B . n B 1 120 MSE 120 120 120 MSE MSE B . n B 1 121 GLU 121 121 ? ? ? B . n B 1 122 GLN 122 122 ? ? ? B . n B 1 123 ARG 123 123 ? ? ? B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 HOH 1 2001 2001 HOH HOH A . C 2 HOH 2 2002 2002 HOH HOH A . C 2 HOH 3 2003 2003 HOH HOH A . C 2 HOH 4 2004 2004 HOH HOH A . C 2 HOH 5 2005 2005 HOH HOH A . C 2 HOH 6 2006 2006 HOH HOH A . C 2 HOH 7 2007 2007 HOH HOH A . C 2 HOH 8 2008 2008 HOH HOH A . C 2 HOH 9 2009 2009 HOH HOH A . C 2 HOH 10 2010 2010 HOH HOH A . C 2 HOH 11 2011 2011 HOH HOH A . C 2 HOH 12 2012 2012 HOH HOH A . C 2 HOH 13 2013 2013 HOH HOH A . C 2 HOH 14 2014 2014 HOH HOH A . C 2 HOH 15 2015 2015 HOH HOH A . C 2 HOH 16 2016 2016 HOH HOH A . C 2 HOH 17 2017 2017 HOH HOH A . C 2 HOH 18 2018 2018 HOH HOH A . C 2 HOH 19 2019 2019 HOH HOH A . D 2 HOH 1 2001 2001 HOH HOH B . D 2 HOH 2 2002 2002 HOH HOH B . D 2 HOH 3 2003 2003 HOH HOH B . D 2 HOH 4 2004 2004 HOH HOH B . D 2 HOH 5 2005 2005 HOH HOH B . D 2 HOH 6 2006 2006 HOH HOH B . D 2 HOH 7 2007 2007 HOH HOH B . D 2 HOH 8 2008 2008 HOH HOH B . D 2 HOH 9 2009 2009 HOH HOH B . D 2 HOH 10 2010 2010 HOH HOH B . D 2 HOH 11 2011 2011 HOH HOH B . D 2 HOH 12 2012 2012 HOH HOH B . D 2 HOH 13 2013 2013 HOH HOH B . D 2 HOH 14 2014 2014 HOH HOH B . D 2 HOH 15 2015 2015 HOH HOH B . D 2 HOH 16 2016 2016 HOH HOH B . D 2 HOH 17 2017 2017 HOH HOH B . D 2 HOH 18 2018 2018 HOH HOH B . D 2 HOH 19 2019 2019 HOH HOH B . D 2 HOH 20 2020 2020 HOH HOH B . D 2 HOH 21 2021 2021 HOH HOH B . D 2 HOH 22 2022 2022 HOH HOH B . D 2 HOH 23 2023 2023 HOH HOH B . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 94 A MSE 94 ? MET SELENOMETHIONINE 2 A MSE 101 A MSE 101 ? MET SELENOMETHIONINE 3 A MSE 120 A MSE 120 ? MET SELENOMETHIONINE 4 B MSE 94 B MSE 94 ? MET SELENOMETHIONINE 5 B MSE 101 B MSE 101 ? MET SELENOMETHIONINE 6 B MSE 120 B MSE 120 ? MET SELENOMETHIONINE # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_and_software_defined_assembly PQS monomeric 1 2 author_and_software_defined_assembly PQS monomeric 1 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,C 2 1 B,D # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2008-10-14 2 'Structure model' 1 1 2011-07-13 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' Advisory 2 2 'Structure model' 'Version format compliance' # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][3] 'X-RAY DIFFRACTION' 1 ? refined 35.8403 6.0700 25.4346 0.0854 0.0762 0.0797 -0.0084 0.0099 -0.0177 4.1261 6.2473 6.2662 -1.6252 2.1060 2.8187 -0.0479 0.4456 0.1606 -0.3037 0.0063 -0.3537 -0.2369 0.1599 0.0415 'X-RAY DIFFRACTION' 2 ? refined 22.8429 24.1598 41.3433 0.0879 0.0519 0.0808 -0.0164 0.0291 0.0184 4.4759 3.0164 6.2782 -2.1521 0.0089 1.1474 0.1429 -0.0011 0.2002 0.1726 0.0619 -0.3042 -0.1538 0.3158 -0.2048 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 'X-RAY DIFFRACTION' 1 1 A 6 ? ? A 120 ? ? ? ? 'X-RAY DIFFRACTION' 2 2 B 6 ? ? B 120 ? ? ? ? # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal REFMAC refinement 5.4.0077 ? 1 MOSFLM 'data reduction' . ? 2 SCALA 'data scaling' . ? 3 SHELX phasing . ? 4 # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 CG1 A VAL 27 ? ? CE2 A PHE 59 ? ? 1.71 2 1 O A HOH 2016 ? ? O A HOH 2017 ? ? 2.10 3 1 CG1 A VAL 27 ? ? CD2 A PHE 59 ? ? 2.18 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASP B 12 ? ? 83.76 -6.74 2 1 GLU B 20 ? ? -103.40 49.78 3 1 HIS B 23 ? ? -65.90 8.50 4 1 GLU B 54 ? ? -148.00 -32.43 5 1 LEU B 73 ? ? -48.98 -18.92 6 1 ARG B 119 ? ? -126.24 -63.57 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MSE 1 ? A MSE 1 2 1 Y 1 A SER 2 ? A SER 2 3 1 Y 1 A SER 3 ? A SER 3 4 1 Y 1 A ARG 4 ? A ARG 4 5 1 Y 1 A VAL 5 ? A VAL 5 6 1 Y 1 A GLU 121 ? A GLU 121 7 1 Y 1 A GLN 122 ? A GLN 122 8 1 Y 1 A ARG 123 ? A ARG 123 9 1 Y 1 B MSE 1 ? B MSE 1 10 1 Y 1 B SER 2 ? B SER 2 11 1 Y 1 B SER 3 ? B SER 3 12 1 Y 1 B ARG 4 ? B ARG 4 13 1 Y 1 B VAL 5 ? B VAL 5 14 1 Y 1 B GLU 121 ? B GLU 121 15 1 Y 1 B GLN 122 ? B GLN 122 16 1 Y 1 B ARG 123 ? B ARG 123 # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH #