data_2W5Z # _entry.id 2W5Z # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.279 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 2W5Z PDBE EBI-38294 WWPDB D_1290038294 # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.content_type _pdbx_database_related.details PDB 2AGH unspecified 'STRUCTURAL BASIS FOR COOPERATIVE TRANSCRIPTION FACTORBINDING TO THE CBP COACTIVATOR' PDB 2J2S unspecified 'SOLUTION STRUCTURE OF THE NONMETHYL-CPG- BINDING CXXC DOMAIN OF THE LEUKAEMIA- ASSOCIATED MLL HISTONE METHYLTRANSFERASE' PDB 2W5Y unspecified 'BINARY COMPLEX OF THE MIXED LINEAGE LEUKAEMIA (MLL1) SET DOMAIN WITH THE COFACTOR PRODUCT S-ADENOSYLHOMOCYSTEINE.' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 2W5Z _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.SG_entry . _pdbx_database_status.recvd_initial_deposition_date 2008-12-15 _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Southall, S.M.' 1 'Wong, P.S.' 2 'Odho, Z.' 3 'Roe, S.M.' 4 'Wilson, J.R.' 5 # _citation.id primary _citation.title 'Structural Basis for the Requirement of Additional Factors for Mll1 Set Domain Activity and Recognition of Epigenetic Marks.' _citation.journal_abbrev Mol.Cell _citation.journal_volume 33 _citation.page_first 181 _citation.page_last ? _citation.year 2009 _citation.journal_id_ASTM MOCEFL _citation.country US _citation.journal_id_ISSN 1097-2765 _citation.journal_id_CSD 2168 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 19187761 _citation.pdbx_database_id_DOI 10.1016/J.MOLCEL.2008.12.029 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Southall, S.M.' 1 primary 'Wong, P.S.' 2 primary 'Odho, Z.' 3 primary 'Roe, S.M.' 4 primary 'Wilson, J.R.' 5 # _cell.entry_id 2W5Z _cell.length_a 48.950 _cell.length_b 56.550 _cell.length_c 78.410 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2W5Z _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'HISTONE-LYSINE N-METHYLTRANSFERASE HRX' 22181.402 1 2.1.1.43 ? 'METHYLTRANSFERASE DOMAIN, RESIDUES 3785-3969' ? 2 polymer man 'HISTONE PEPTIDE' 1124.294 1 2.1.1.43 ? ? ? 3 non-polymer syn 'ZINC ION' 65.409 1 ? ? ? ? 4 non-polymer syn S-ADENOSYL-L-HOMOCYSTEINE 384.411 1 ? ? ? ? 5 non-polymer syn GLYCEROL 92.094 2 ? ? ? ? 6 water nat water 18.015 64 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'ZINC FINGER PROTEIN HRX, ALL-1, TRITHORAX-LIKE PROTEIN, LYSINE N-METHYLTRANSFERASE 2A, CXXC-TYPE ZINC FINGER PROTEIN 7, MLL-1' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;GPLGSHMHRQPPEYNPNDEEEEEVQLKSARRATSMDLPMPMRFRHLKKTSKEAVGVYRSPIHGRGLFCKRNIDAGEMVIE YAGNVIRSIQTDKREKYYDSKGIGCYMFRIDDSEVVDATMHGNAARFINHSCEPNCYSRVINIDGQKHIVIFAMRKIYRG EELTYDYKFPIEDASNKLPCNCGAKKCRKFLN ; ;GPLGSHMHRQPPEYNPNDEEEEEVQLKSARRATSMDLPMPMRFRHLKKTSKEAVGVYRSPIHGRGLFCKRNIDAGEMVIE YAGNVIRSIQTDKREKYYDSKGIGCYMFRIDDSEVVDATMHGNAARFINHSCEPNCYSRVINIDGQKHIVIFAMRKIYRG EELTYDYKFPIEDASNKLPCNCGAKKCRKFLN ; A ? 2 'polypeptide(L)' no yes 'ART(MLY)QTARY' ARTKQTARY C ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 PRO n 1 3 LEU n 1 4 GLY n 1 5 SER n 1 6 HIS n 1 7 MET n 1 8 HIS n 1 9 ARG n 1 10 GLN n 1 11 PRO n 1 12 PRO n 1 13 GLU n 1 14 TYR n 1 15 ASN n 1 16 PRO n 1 17 ASN n 1 18 ASP n 1 19 GLU n 1 20 GLU n 1 21 GLU n 1 22 GLU n 1 23 GLU n 1 24 VAL n 1 25 GLN n 1 26 LEU n 1 27 LYS n 1 28 SER n 1 29 ALA n 1 30 ARG n 1 31 ARG n 1 32 ALA n 1 33 THR n 1 34 SER n 1 35 MET n 1 36 ASP n 1 37 LEU n 1 38 PRO n 1 39 MET n 1 40 PRO n 1 41 MET n 1 42 ARG n 1 43 PHE n 1 44 ARG n 1 45 HIS n 1 46 LEU n 1 47 LYS n 1 48 LYS n 1 49 THR n 1 50 SER n 1 51 LYS n 1 52 GLU n 1 53 ALA n 1 54 VAL n 1 55 GLY n 1 56 VAL n 1 57 TYR n 1 58 ARG n 1 59 SER n 1 60 PRO n 1 61 ILE n 1 62 HIS n 1 63 GLY n 1 64 ARG n 1 65 GLY n 1 66 LEU n 1 67 PHE n 1 68 CYS n 1 69 LYS n 1 70 ARG n 1 71 ASN n 1 72 ILE n 1 73 ASP n 1 74 ALA n 1 75 GLY n 1 76 GLU n 1 77 MET n 1 78 VAL n 1 79 ILE n 1 80 GLU n 1 81 TYR n 1 82 ALA n 1 83 GLY n 1 84 ASN n 1 85 VAL n 1 86 ILE n 1 87 ARG n 1 88 SER n 1 89 ILE n 1 90 GLN n 1 91 THR n 1 92 ASP n 1 93 LYS n 1 94 ARG n 1 95 GLU n 1 96 LYS n 1 97 TYR n 1 98 TYR n 1 99 ASP n 1 100 SER n 1 101 LYS n 1 102 GLY n 1 103 ILE n 1 104 GLY n 1 105 CYS n 1 106 TYR n 1 107 MET n 1 108 PHE n 1 109 ARG n 1 110 ILE n 1 111 ASP n 1 112 ASP n 1 113 SER n 1 114 GLU n 1 115 VAL n 1 116 VAL n 1 117 ASP n 1 118 ALA n 1 119 THR n 1 120 MET n 1 121 HIS n 1 122 GLY n 1 123 ASN n 1 124 ALA n 1 125 ALA n 1 126 ARG n 1 127 PHE n 1 128 ILE n 1 129 ASN n 1 130 HIS n 1 131 SER n 1 132 CYS n 1 133 GLU n 1 134 PRO n 1 135 ASN n 1 136 CYS n 1 137 TYR n 1 138 SER n 1 139 ARG n 1 140 VAL n 1 141 ILE n 1 142 ASN n 1 143 ILE n 1 144 ASP n 1 145 GLY n 1 146 GLN n 1 147 LYS n 1 148 HIS n 1 149 ILE n 1 150 VAL n 1 151 ILE n 1 152 PHE n 1 153 ALA n 1 154 MET n 1 155 ARG n 1 156 LYS n 1 157 ILE n 1 158 TYR n 1 159 ARG n 1 160 GLY n 1 161 GLU n 1 162 GLU n 1 163 LEU n 1 164 THR n 1 165 TYR n 1 166 ASP n 1 167 TYR n 1 168 LYS n 1 169 PHE n 1 170 PRO n 1 171 ILE n 1 172 GLU n 1 173 ASP n 1 174 ALA n 1 175 SER n 1 176 ASN n 1 177 LYS n 1 178 LEU n 1 179 PRO n 1 180 CYS n 1 181 ASN n 1 182 CYS n 1 183 GLY n 1 184 ALA n 1 185 LYS n 1 186 LYS n 1 187 CYS n 1 188 ARG n 1 189 LYS n 1 190 PHE n 1 191 LEU n 1 192 ASN n 2 1 ALA n 2 2 ARG n 2 3 THR n 2 4 MLY n 2 5 GLN n 2 6 THR n 2 7 ALA n 2 8 ARG n 2 9 TYR n # loop_ _entity_src_gen.entity_id _entity_src_gen.pdbx_src_id _entity_src_gen.pdbx_alt_source_flag _entity_src_gen.pdbx_seq_type _entity_src_gen.pdbx_beg_seq_num _entity_src_gen.pdbx_end_seq_num _entity_src_gen.gene_src_common_name _entity_src_gen.gene_src_genus _entity_src_gen.pdbx_gene_src_gene _entity_src_gen.gene_src_species _entity_src_gen.gene_src_strain _entity_src_gen.gene_src_tissue _entity_src_gen.gene_src_tissue_fraction _entity_src_gen.gene_src_details _entity_src_gen.pdbx_gene_src_fragment _entity_src_gen.pdbx_gene_src_scientific_name _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id _entity_src_gen.pdbx_gene_src_variant _entity_src_gen.pdbx_gene_src_cell_line _entity_src_gen.pdbx_gene_src_atcc _entity_src_gen.pdbx_gene_src_organ _entity_src_gen.pdbx_gene_src_organelle _entity_src_gen.pdbx_gene_src_cell _entity_src_gen.pdbx_gene_src_cellular_location _entity_src_gen.host_org_common_name _entity_src_gen.pdbx_host_org_scientific_name _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id _entity_src_gen.host_org_genus _entity_src_gen.pdbx_host_org_gene _entity_src_gen.pdbx_host_org_organ _entity_src_gen.host_org_species _entity_src_gen.pdbx_host_org_tissue _entity_src_gen.pdbx_host_org_tissue_fraction _entity_src_gen.pdbx_host_org_strain _entity_src_gen.pdbx_host_org_variant _entity_src_gen.pdbx_host_org_cell_line _entity_src_gen.pdbx_host_org_atcc _entity_src_gen.pdbx_host_org_culture_collection _entity_src_gen.pdbx_host_org_cell _entity_src_gen.pdbx_host_org_organelle _entity_src_gen.pdbx_host_org_cellular_location _entity_src_gen.pdbx_host_org_vector_type _entity_src_gen.pdbx_host_org_vector _entity_src_gen.host_org_details _entity_src_gen.expression_system_id _entity_src_gen.plasmid_name _entity_src_gen.plasmid_details _entity_src_gen.pdbx_description 1 1 sample ? ? ? HUMAN ? ? ? ? ? ? ? ? 'HOMO SAPIENS' 9606 ? ? ? ? ? ? ? ? 'ESCHERICHIA COLI' 469008 ? ? ? ? ? ? 'BL21(DE3)' 'ROSETTA 2' ? ? ? ? ? ? ? ? ? ? PTHREE-E ? ? 2 1 sample ? ? ? HUMAN ? ? ? ? ? ? ? ? 'HOMO SAPIENS' 9606 ? ? ? ? ? ? ? ? 'ESCHERICHIA COLI' 469008 ? ? ? ? ? ? 'BL21(DE3)' 'ROSETTA 2' ? ? ? ? ? ? ? ? ? ? PTHREE-E ? ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform 1 PDB 2W5Z 1 ? ? 2W5Z ? 2 UNP HRX_HUMAN 1 ? ? Q03164 ? 3 PDB 2W5Z 2 ? ? 2W5Z ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 2W5Z A 1 ? 7 ? 2W5Z 3778 ? 3784 ? 3778 3784 2 2 2W5Z A 8 ? 192 ? Q03164 3785 ? 3969 ? 3785 3969 3 3 2W5Z C 1 ? 9 ? 2W5Z 1 ? 9 ? 1 9 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 GOL non-polymer . GLYCEROL 'GLYCERIN; PROPANE-1,2,3-TRIOL' 'C3 H8 O3' 92.094 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MLY 'L-peptide linking' n N-DIMETHYL-LYSINE ? 'C8 H18 N2 O2' 174.241 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SAH 'L-peptide linking' n S-ADENOSYL-L-HOMOCYSTEINE ? 'C14 H20 N6 O5 S' 384.411 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 ZN non-polymer . 'ZINC ION' ? 'Zn 2' 65.409 # _exptl.entry_id 2W5Z _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.38 _exptl_crystal.density_percent_sol 48 _exptl_crystal.description NONE # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method ? _exptl_crystal_grow.temp ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 6.8 _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details '0.1 M SODIUM CACODYLATE PH6.8, 2 % PEG 5000, 30 % 2-METHYL-2, 4-PENTANDIOL' # _diffrn.id 1 _diffrn.ambient_temp 287 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC CCD' _diffrn_detector.pdbx_collection_date 2008-05-14 _diffrn_detector.details MIRRORS # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'GRAPHIC CRYSTAL' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9200 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'DIAMOND BEAMLINE I03' _diffrn_source.pdbx_synchrotron_site Diamond _diffrn_source.pdbx_synchrotron_beamline I03 _diffrn_source.pdbx_wavelength 0.9200 _diffrn_source.pdbx_wavelength_list ? # _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.entry_id 2W5Z _reflns.observed_criterion_sigma_I 2.0 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 41.50 _reflns.d_resolution_high 2.20 _reflns.number_obs 20973 _reflns.number_all ? _reflns.percent_possible_obs 99.4 _reflns.pdbx_Rmerge_I_obs 0.11 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 10.10 _reflns.B_iso_Wilson_estimate 23.32 _reflns.pdbx_redundancy 3.7 # _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_ordinal 1 _reflns_shell.d_res_high 2.20 _reflns_shell.d_res_low 2.30 _reflns_shell.percent_possible_all 97.2 _reflns_shell.Rmerge_I_obs 0.37 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 3.10 _reflns_shell.pdbx_redundancy 3.2 # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 2W5Z _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 20973 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.260 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 41.52 _refine.ls_d_res_high 2.20 _refine.ls_percent_reflns_obs 98.4 _refine.ls_R_factor_obs 0.197 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.194 _refine.ls_R_factor_R_free 0.247 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.200 _refine.ls_number_reflns_R_free 1080 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean 43.13 _refine.aniso_B[1][1] -18.66540 _refine.aniso_B[2][2] -13.61740 _refine.aniso_B[3][3] 5.62240 _refine.aniso_B[1][2] -0.00000 _refine.aniso_B[1][3] 0.00000 _refine.aniso_B[2][3] -0.00000 _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_ksol 0.34 _refine.solvent_model_param_bsol 49.80 _refine.pdbx_solvent_vdw_probe_radii 1.11 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.90 _refine.pdbx_ls_cross_valid_method ? _refine.details 'DISORDERED REGIONS WERE NOT INCLUDED IN THE MODEL' _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML 0.310 _refine.pdbx_overall_phase_error 26.580 _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1486 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 39 _refine_hist.number_atoms_solvent 64 _refine_hist.number_atoms_total 1589 _refine_hist.d_res_high 2.20 _refine_hist.d_res_low 41.52 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function f_bond_d 0.005 ? ? 1595 'X-RAY DIFFRACTION' ? f_angle_d 0.911 ? ? 2151 'X-RAY DIFFRACTION' ? f_dihedral_angle_d 17.110 ? ? 631 'X-RAY DIFFRACTION' ? f_chiral_restr 0.073 ? ? 219 'X-RAY DIFFRACTION' ? f_plane_restr 0.003 ? ? 281 'X-RAY DIFFRACTION' ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_all _refine_ls_shell.R_factor_all 'X-RAY DIFFRACTION' . 2.2002 2.3003 2280 0.2209 91.00 0.2970 . . 127 . . 'X-RAY DIFFRACTION' . 2.3003 2.4216 2549 0.2409 100.00 0.3162 . . 124 . . 'X-RAY DIFFRACTION' . 2.4216 2.5733 2539 0.2280 99.00 0.3468 . . 136 . . 'X-RAY DIFFRACTION' . 2.5733 2.7719 2480 0.2056 99.00 0.2649 . . 135 . . 'X-RAY DIFFRACTION' . 2.7719 3.0508 2503 0.1886 100.00 0.2561 . . 149 . . 'X-RAY DIFFRACTION' . 3.0508 3.4921 2512 0.1781 99.00 0.2658 . . 142 . . 'X-RAY DIFFRACTION' . 3.4921 4.3989 2549 0.1495 100.00 0.1564 . . 122 . . 'X-RAY DIFFRACTION' . 4.3989 41.5303 2481 0.1762 99.00 0.2126 . . 145 . . # _struct.entry_id 2W5Z _struct.title ;Ternary Complex of the Mixed Lineage Leukaemia (MLL1) SET Domain with the cofactor product S-Adenosylhomocysteine and histone peptide. ; _struct.pdbx_descriptor 'HISTONE-LYSINE N-METHYLTRANSFERASE HRX (E.C.2.1.1.43), HISTONE PEPTIDE (E.C.2.1.1.43)' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2W5Z _struct_keywords.pdbx_keywords TRANSFERASE _struct_keywords.text ;TRANSCRIPTION REGULATION, CHROMOSOMAL REARRANGEMENT, PROTEIN LYSINE METHYLTRANSFERASE, PROTO-ONCOGENE, PHOSPHOPROTEIN, UBL CONJUGATION, S-ADENOSYL-L-METHIONINE, MIXED LINEAGE LEUKAEMIA, POLYMORPHISM, TRANSCRIPTION, METAL-BINDING, ZINC-FINGER, DNA-BINDING, BROMODOMAIN, TRANSFERASE, METHYLTRANSFERASE, CHROMATIN REGULATOR, ALTERNATIVE SPLICING, HISTONE MODIFICATION, MLL1, ZINC, KMT2A, NUCLEUS, APOPTOSIS, SET DOMAIN ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? F N N 5 ? G N N 6 ? H N N 6 ? # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ARG A 31 ? MET A 35 ? ARG A 3808 MET A 3812 5 ? 5 HELX_P HELX_P2 2 PRO A 38 ? ARG A 44 ? PRO A 3815 ARG A 3821 1 ? 7 HELX_P HELX_P3 3 HIS A 45 ? ALA A 53 ? HIS A 3822 ALA A 3830 1 ? 9 HELX_P HELX_P4 4 GLN A 90 ? LYS A 101 ? GLN A 3867 LYS A 3878 1 ? 12 HELX_P HELX_P5 5 ASN A 123 ? ILE A 128 ? ASN A 3900 ILE A 3905 5 ? 6 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc1 metalc ? ? C ZN . ZN ? ? ? 1_555 A CYS 180 SG ? ? A ZN 4970 A CYS 3957 1_555 ? ? ? ? ? ? ? 2.322 ? metalc2 metalc ? ? C ZN . ZN ? ? ? 1_555 A CYS 182 SG ? ? A ZN 4970 A CYS 3959 1_555 ? ? ? ? ? ? ? 2.297 ? metalc3 metalc ? ? C ZN . ZN ? ? ? 1_555 A CYS 132 SG ? ? A ZN 4970 A CYS 3909 1_555 ? ? ? ? ? ? ? 2.475 ? covale1 covale ? ? B THR 3 C ? ? ? 1_555 B MLY 4 N A ? C THR 3 C MLY 4 1_555 ? ? ? ? ? ? ? 1.331 ? covale2 covale ? ? B THR 3 C ? ? ? 1_555 B MLY 4 N B ? C THR 3 C MLY 4 1_555 ? ? ? ? ? ? ? 1.330 ? covale3 covale ? ? B MLY 4 C B ? ? 1_555 B GLN 5 N B ? C MLY 4 C GLN 5 1_555 ? ? ? ? ? ? ? 1.375 ? covale4 covale ? ? B MLY 4 C A ? ? 1_555 B GLN 5 N A ? C MLY 4 C GLN 5 1_555 ? ? ? ? ? ? ? 1.281 ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference metalc ? ? covale ? ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id ALA _struct_mon_prot_cis.label_seq_id 174 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id ALA _struct_mon_prot_cis.auth_seq_id 3951 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 SER _struct_mon_prot_cis.pdbx_label_seq_id_2 175 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 SER _struct_mon_prot_cis.pdbx_auth_seq_id_2 3952 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle -0.71 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA ? 4 ? AB ? 3 ? AC ? 3 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA 1 2 ? anti-parallel AA 2 3 ? anti-parallel AA 3 4 ? parallel AB 1 2 ? anti-parallel AB 2 3 ? anti-parallel AC 1 2 ? anti-parallel AC 2 3 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA 1 VAL A 54 ? ARG A 58 ? VAL A 3831 ARG A 3835 AA 2 ARG A 64 ? CYS A 68 ? ARG A 3841 CYS A 3845 AA 3 GLU A 162 ? TYR A 165 ? GLU A 3939 TYR A 3942 AA 4 ASN A 129 ? HIS A 130 ? ASN A 3906 HIS A 3907 AB 1 MET A 77 ? GLU A 80 ? MET A 3854 GLU A 3857 AB 2 GLN A 146 ? ALA A 153 ? GLN A 3923 ALA A 3930 AB 3 CYS A 136 ? ILE A 143 ? CYS A 3913 ILE A 3920 AC 1 ASN A 84 ? ARG A 87 ? ASN A 3861 ARG A 3864 AC 2 GLU A 114 ? ASP A 117 ? GLU A 3891 ASP A 3894 AC 3 MET A 107 ? ARG A 109 ? MET A 3884 ARG A 3886 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA 1 2 N TYR A 57 ? N TYR A 3834 O GLY A 65 ? O GLY A 3842 AA 2 3 O LEU A 66 ? O LEU A 3843 N LEU A 163 ? N LEU A 3940 AA 3 4 N TYR A 165 ? N TYR A 3942 O ASN A 129 ? O ASN A 3906 AB 1 2 N VAL A 78 ? N VAL A 3855 O ILE A 151 ? O ILE A 3928 AB 2 3 N PHE A 152 ? N PHE A 3929 O TYR A 137 ? O TYR A 3914 AC 1 2 N ILE A 86 ? N ILE A 3863 O VAL A 115 ? O VAL A 3892 AC 2 3 N VAL A 116 ? N VAL A 3893 O PHE A 108 ? O PHE A 3885 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software ? ? ? ? 4 'BINDING SITE FOR RESIDUE ZN A4970' AC2 Software ? ? ? ? 13 'BINDING SITE FOR RESIDUE SAH A4971' AC3 Software ? ? ? ? 4 'BINDING SITE FOR RESIDUE GOL A4972' AC4 Software ? ? ? ? 2 'BINDING SITE FOR RESIDUE GOL A4973' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 4 CYS A 132 ? CYS A 3909 . ? 1_555 ? 2 AC1 4 CYS A 180 ? CYS A 3957 . ? 1_555 ? 3 AC1 4 CYS A 182 ? CYS A 3959 . ? 1_555 ? 4 AC1 4 CYS A 187 ? CYS A 3964 . ? 1_555 ? 5 AC2 13 ILE A 61 ? ILE A 3838 . ? 1_555 ? 6 AC2 13 HIS A 62 ? HIS A 3839 . ? 1_555 ? 7 AC2 13 ARG A 64 ? ARG A 3841 . ? 1_555 ? 8 AC2 13 TYR A 106 ? TYR A 3883 . ? 1_555 ? 9 AC2 13 ARG A 126 ? ARG A 3903 . ? 1_555 ? 10 AC2 13 PHE A 127 ? PHE A 3904 . ? 1_555 ? 11 AC2 13 ASN A 129 ? ASN A 3906 . ? 1_555 ? 12 AC2 13 HIS A 130 ? HIS A 3907 . ? 1_555 ? 13 AC2 13 TYR A 167 ? TYR A 3944 . ? 1_555 ? 14 AC2 13 PRO A 179 ? PRO A 3956 . ? 1_555 ? 15 AC2 13 CYS A 180 ? CYS A 3957 . ? 1_555 ? 16 AC2 13 ASN A 181 ? ASN A 3958 . ? 1_555 ? 17 AC2 13 MLY B 4 ? MLY C 4 . ? 1_555 ? 18 AC3 4 ASN A 142 ? ASN A 3919 . ? 1_555 ? 19 AC3 4 LYS A 147 ? LYS A 3924 . ? 1_555 ? 20 AC3 4 ARG A 155 ? ARG A 3932 . ? 1_555 ? 21 AC3 4 LYS A 156 ? LYS A 3933 . ? 1_555 ? 22 AC4 2 ARG A 139 ? ARG A 3916 . ? 1_555 ? 23 AC4 2 ARG A 159 ? ARG A 3936 . ? 1_555 ? # _database_PDB_matrix.entry_id 2W5Z _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 2W5Z _atom_sites.fract_transf_matrix[1][1] 0.020429 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.017683 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.012753 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S ZN # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 3778 ? ? ? A . n A 1 2 PRO 2 3779 ? ? ? A . n A 1 3 LEU 3 3780 ? ? ? A . n A 1 4 GLY 4 3781 ? ? ? A . n A 1 5 SER 5 3782 ? ? ? A . n A 1 6 HIS 6 3783 ? ? ? A . n A 1 7 MET 7 3784 ? ? ? A . n A 1 8 HIS 8 3785 ? ? ? A . n A 1 9 ARG 9 3786 ? ? ? A . n A 1 10 GLN 10 3787 ? ? ? A . n A 1 11 PRO 11 3788 ? ? ? A . n A 1 12 PRO 12 3789 ? ? ? A . n A 1 13 GLU 13 3790 3790 GLU GLU A . n A 1 14 TYR 14 3791 3791 TYR TYR A . n A 1 15 ASN 15 3792 3792 ASN ASN A . n A 1 16 PRO 16 3793 3793 PRO PRO A . n A 1 17 ASN 17 3794 3794 ASN ASN A . n A 1 18 ASP 18 3795 3795 ASP ASP A . n A 1 19 GLU 19 3796 3796 GLU GLU A . n A 1 20 GLU 20 3797 3797 GLU GLU A . n A 1 21 GLU 21 3798 3798 GLU GLU A . n A 1 22 GLU 22 3799 3799 GLU GLU A . n A 1 23 GLU 23 3800 3800 GLU GLU A . n A 1 24 VAL 24 3801 3801 VAL VAL A . n A 1 25 GLN 25 3802 3802 GLN GLN A . n A 1 26 LEU 26 3803 3803 LEU LEU A . n A 1 27 LYS 27 3804 3804 LYS LYS A . n A 1 28 SER 28 3805 3805 SER SER A . n A 1 29 ALA 29 3806 3806 ALA ALA A . n A 1 30 ARG 30 3807 3807 ARG ARG A . n A 1 31 ARG 31 3808 3808 ARG ARG A . n A 1 32 ALA 32 3809 3809 ALA ALA A . n A 1 33 THR 33 3810 3810 THR THR A . n A 1 34 SER 34 3811 3811 SER SER A . n A 1 35 MET 35 3812 3812 MET MET A . n A 1 36 ASP 36 3813 3813 ASP ASP A . n A 1 37 LEU 37 3814 3814 LEU LEU A . n A 1 38 PRO 38 3815 3815 PRO PRO A . n A 1 39 MET 39 3816 3816 MET MET A . n A 1 40 PRO 40 3817 3817 PRO PRO A . n A 1 41 MET 41 3818 3818 MET MET A . n A 1 42 ARG 42 3819 3819 ARG ARG A . n A 1 43 PHE 43 3820 3820 PHE PHE A . n A 1 44 ARG 44 3821 3821 ARG ARG A . n A 1 45 HIS 45 3822 3822 HIS HIS A . n A 1 46 LEU 46 3823 3823 LEU LEU A . n A 1 47 LYS 47 3824 3824 LYS LYS A . n A 1 48 LYS 48 3825 3825 LYS LYS A . n A 1 49 THR 49 3826 3826 THR THR A . n A 1 50 SER 50 3827 3827 SER SER A . n A 1 51 LYS 51 3828 3828 LYS LYS A . n A 1 52 GLU 52 3829 3829 GLU GLU A . n A 1 53 ALA 53 3830 3830 ALA ALA A . n A 1 54 VAL 54 3831 3831 VAL VAL A . n A 1 55 GLY 55 3832 3832 GLY GLY A . n A 1 56 VAL 56 3833 3833 VAL VAL A . n A 1 57 TYR 57 3834 3834 TYR TYR A . n A 1 58 ARG 58 3835 3835 ARG ARG A . n A 1 59 SER 59 3836 3836 SER SER A . n A 1 60 PRO 60 3837 3837 PRO PRO A . n A 1 61 ILE 61 3838 3838 ILE ILE A . n A 1 62 HIS 62 3839 3839 HIS HIS A . n A 1 63 GLY 63 3840 3840 GLY GLY A . n A 1 64 ARG 64 3841 3841 ARG ARG A . n A 1 65 GLY 65 3842 3842 GLY GLY A . n A 1 66 LEU 66 3843 3843 LEU LEU A . n A 1 67 PHE 67 3844 3844 PHE PHE A . n A 1 68 CYS 68 3845 3845 CYS CYS A . n A 1 69 LYS 69 3846 3846 LYS LYS A . n A 1 70 ARG 70 3847 3847 ARG ARG A . n A 1 71 ASN 71 3848 3848 ASN ASN A . n A 1 72 ILE 72 3849 3849 ILE ILE A . n A 1 73 ASP 73 3850 3850 ASP ASP A . n A 1 74 ALA 74 3851 3851 ALA ALA A . n A 1 75 GLY 75 3852 3852 GLY GLY A . n A 1 76 GLU 76 3853 3853 GLU GLU A . n A 1 77 MET 77 3854 3854 MET MET A . n A 1 78 VAL 78 3855 3855 VAL VAL A . n A 1 79 ILE 79 3856 3856 ILE ILE A . n A 1 80 GLU 80 3857 3857 GLU GLU A . n A 1 81 TYR 81 3858 3858 TYR TYR A . n A 1 82 ALA 82 3859 3859 ALA ALA A . n A 1 83 GLY 83 3860 3860 GLY GLY A . n A 1 84 ASN 84 3861 3861 ASN ASN A . n A 1 85 VAL 85 3862 3862 VAL VAL A . n A 1 86 ILE 86 3863 3863 ILE ILE A . n A 1 87 ARG 87 3864 3864 ARG ARG A . n A 1 88 SER 88 3865 3865 SER SER A . n A 1 89 ILE 89 3866 3866 ILE ILE A . n A 1 90 GLN 90 3867 3867 GLN GLN A . n A 1 91 THR 91 3868 3868 THR THR A . n A 1 92 ASP 92 3869 3869 ASP ASP A . n A 1 93 LYS 93 3870 3870 LYS LYS A . n A 1 94 ARG 94 3871 3871 ARG ARG A . n A 1 95 GLU 95 3872 3872 GLU GLU A . n A 1 96 LYS 96 3873 3873 LYS LYS A . n A 1 97 TYR 97 3874 3874 TYR TYR A . n A 1 98 TYR 98 3875 3875 TYR TYR A . n A 1 99 ASP 99 3876 3876 ASP ASP A . n A 1 100 SER 100 3877 3877 SER SER A . n A 1 101 LYS 101 3878 3878 LYS LYS A . n A 1 102 GLY 102 3879 3879 GLY GLY A . n A 1 103 ILE 103 3880 3880 ILE ILE A . n A 1 104 GLY 104 3881 3881 GLY GLY A . n A 1 105 CYS 105 3882 3882 CYS CYS A . n A 1 106 TYR 106 3883 3883 TYR TYR A . n A 1 107 MET 107 3884 3884 MET MET A . n A 1 108 PHE 108 3885 3885 PHE PHE A . n A 1 109 ARG 109 3886 3886 ARG ARG A . n A 1 110 ILE 110 3887 3887 ILE ILE A . n A 1 111 ASP 111 3888 3888 ASP ASP A . n A 1 112 ASP 112 3889 3889 ASP ASP A . n A 1 113 SER 113 3890 3890 SER SER A . n A 1 114 GLU 114 3891 3891 GLU GLU A . n A 1 115 VAL 115 3892 3892 VAL VAL A . n A 1 116 VAL 116 3893 3893 VAL VAL A . n A 1 117 ASP 117 3894 3894 ASP ASP A . n A 1 118 ALA 118 3895 3895 ALA ALA A . n A 1 119 THR 119 3896 3896 THR THR A . n A 1 120 MET 120 3897 3897 MET MET A . n A 1 121 HIS 121 3898 3898 HIS HIS A . n A 1 122 GLY 122 3899 3899 GLY GLY A . n A 1 123 ASN 123 3900 3900 ASN ASN A . n A 1 124 ALA 124 3901 3901 ALA ALA A . n A 1 125 ALA 125 3902 3902 ALA ALA A . n A 1 126 ARG 126 3903 3903 ARG ARG A . n A 1 127 PHE 127 3904 3904 PHE PHE A . n A 1 128 ILE 128 3905 3905 ILE ILE A . n A 1 129 ASN 129 3906 3906 ASN ASN A . n A 1 130 HIS 130 3907 3907 HIS HIS A . n A 1 131 SER 131 3908 3908 SER SER A . n A 1 132 CYS 132 3909 3909 CYS CYS A . n A 1 133 GLU 133 3910 3910 GLU GLU A . n A 1 134 PRO 134 3911 3911 PRO PRO A . n A 1 135 ASN 135 3912 3912 ASN ASN A . n A 1 136 CYS 136 3913 3913 CYS CYS A . n A 1 137 TYR 137 3914 3914 TYR TYR A . n A 1 138 SER 138 3915 3915 SER SER A . n A 1 139 ARG 139 3916 3916 ARG ARG A . n A 1 140 VAL 140 3917 3917 VAL VAL A . n A 1 141 ILE 141 3918 3918 ILE ILE A . n A 1 142 ASN 142 3919 3919 ASN ASN A . n A 1 143 ILE 143 3920 3920 ILE ILE A . n A 1 144 ASP 144 3921 3921 ASP ASP A . n A 1 145 GLY 145 3922 3922 GLY GLY A . n A 1 146 GLN 146 3923 3923 GLN GLN A . n A 1 147 LYS 147 3924 3924 LYS LYS A . n A 1 148 HIS 148 3925 3925 HIS HIS A . n A 1 149 ILE 149 3926 3926 ILE ILE A . n A 1 150 VAL 150 3927 3927 VAL VAL A . n A 1 151 ILE 151 3928 3928 ILE ILE A . n A 1 152 PHE 152 3929 3929 PHE PHE A . n A 1 153 ALA 153 3930 3930 ALA ALA A . n A 1 154 MET 154 3931 3931 MET MET A . n A 1 155 ARG 155 3932 3932 ARG ARG A . n A 1 156 LYS 156 3933 3933 LYS LYS A . n A 1 157 ILE 157 3934 3934 ILE ILE A . n A 1 158 TYR 158 3935 3935 TYR TYR A . n A 1 159 ARG 159 3936 3936 ARG ARG A . n A 1 160 GLY 160 3937 3937 GLY GLY A . n A 1 161 GLU 161 3938 3938 GLU GLU A . n A 1 162 GLU 162 3939 3939 GLU GLU A . n A 1 163 LEU 163 3940 3940 LEU LEU A . n A 1 164 THR 164 3941 3941 THR THR A . n A 1 165 TYR 165 3942 3942 TYR TYR A . n A 1 166 ASP 166 3943 3943 ASP ASP A . n A 1 167 TYR 167 3944 3944 TYR TYR A . n A 1 168 LYS 168 3945 3945 LYS LYS A . n A 1 169 PHE 169 3946 3946 PHE PHE A . n A 1 170 PRO 170 3947 3947 PRO PRO A . n A 1 171 ILE 171 3948 3948 ILE ILE A . n A 1 172 GLU 172 3949 3949 GLU GLU A . n A 1 173 ASP 173 3950 3950 ASP ASP A . n A 1 174 ALA 174 3951 3951 ALA ALA A . n A 1 175 SER 175 3952 3952 SER SER A . n A 1 176 ASN 176 3953 3953 ASN ASN A . n A 1 177 LYS 177 3954 3954 LYS LYS A . n A 1 178 LEU 178 3955 3955 LEU LEU A . n A 1 179 PRO 179 3956 3956 PRO PRO A . n A 1 180 CYS 180 3957 3957 CYS CYS A . n A 1 181 ASN 181 3958 3958 ASN ASN A . n A 1 182 CYS 182 3959 3959 CYS CYS A . n A 1 183 GLY 183 3960 3960 GLY GLY A . n A 1 184 ALA 184 3961 3961 ALA ALA A . n A 1 185 LYS 185 3962 3962 LYS LYS A . n A 1 186 LYS 186 3963 3963 LYS LYS A . n A 1 187 CYS 187 3964 3964 CYS CYS A . n A 1 188 ARG 188 3965 3965 ARG ARG A . n A 1 189 LYS 189 3966 3966 LYS LYS A . n A 1 190 PHE 190 3967 3967 PHE PHE A . n A 1 191 LEU 191 3968 3968 LEU LEU A . n A 1 192 ASN 192 3969 3969 ASN ASN A . n B 2 1 ALA 1 1 ? ? ? C . n B 2 2 ARG 2 2 2 ARG ARG C . n B 2 3 THR 3 3 3 THR THR C . n B 2 4 MLY 4 4 4 MLY MLY C . n B 2 5 GLN 5 5 5 GLN GLN C . n B 2 6 THR 6 6 6 THR THR C . n B 2 7 ALA 7 7 7 ALA ALA C . n B 2 8 ARG 8 8 8 ARG ARG C . n B 2 9 TYR 9 9 9 TYR TYR C . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 ZN 1 4970 4970 ZN ZN A . D 4 SAH 1 4971 4971 SAH SAH A . E 5 GOL 1 4972 4972 GOL GOL A . F 5 GOL 1 4973 4973 GOL GOL A . G 6 HOH 1 2001 2001 HOH HOH A . G 6 HOH 2 2002 2002 HOH HOH A . G 6 HOH 3 2003 2003 HOH HOH A . G 6 HOH 4 2004 2004 HOH HOH A . G 6 HOH 5 2005 2005 HOH HOH A . G 6 HOH 6 2006 2006 HOH HOH A . G 6 HOH 7 2007 2007 HOH HOH A . G 6 HOH 8 2008 2008 HOH HOH A . G 6 HOH 9 2009 2009 HOH HOH A . G 6 HOH 10 2010 2010 HOH HOH A . G 6 HOH 11 2011 2011 HOH HOH A . G 6 HOH 12 2012 2012 HOH HOH A . G 6 HOH 13 2013 2013 HOH HOH A . G 6 HOH 14 2014 2014 HOH HOH A . G 6 HOH 15 2015 2015 HOH HOH A . G 6 HOH 16 2016 2016 HOH HOH A . G 6 HOH 17 2017 2017 HOH HOH A . G 6 HOH 18 2018 2018 HOH HOH A . G 6 HOH 19 2019 2019 HOH HOH A . G 6 HOH 20 2020 2020 HOH HOH A . G 6 HOH 21 2021 2021 HOH HOH A . G 6 HOH 22 2022 2022 HOH HOH A . G 6 HOH 23 2023 2023 HOH HOH A . G 6 HOH 24 2024 2024 HOH HOH A . G 6 HOH 25 2025 2025 HOH HOH A . G 6 HOH 26 2026 2026 HOH HOH A . G 6 HOH 27 2027 2027 HOH HOH A . G 6 HOH 28 2028 2028 HOH HOH A . G 6 HOH 29 2029 2029 HOH HOH A . G 6 HOH 30 2030 2030 HOH HOH A . G 6 HOH 31 2031 2031 HOH HOH A . G 6 HOH 32 2032 2032 HOH HOH A . G 6 HOH 33 2033 2033 HOH HOH A . G 6 HOH 34 2034 2034 HOH HOH A . G 6 HOH 35 2035 2035 HOH HOH A . G 6 HOH 36 2036 2036 HOH HOH A . G 6 HOH 37 2037 2037 HOH HOH A . G 6 HOH 38 2038 2038 HOH HOH A . G 6 HOH 39 2039 2039 HOH HOH A . G 6 HOH 40 2040 2040 HOH HOH A . G 6 HOH 41 2041 2041 HOH HOH A . G 6 HOH 42 2042 2042 HOH HOH A . G 6 HOH 43 2043 2043 HOH HOH A . G 6 HOH 44 2044 2044 HOH HOH A . G 6 HOH 45 2045 2045 HOH HOH A . G 6 HOH 46 2046 2046 HOH HOH A . G 6 HOH 47 2047 2047 HOH HOH A . G 6 HOH 48 2048 2048 HOH HOH A . G 6 HOH 49 2049 2049 HOH HOH A . G 6 HOH 50 2050 2050 HOH HOH A . G 6 HOH 51 2051 2051 HOH HOH A . G 6 HOH 52 2052 2052 HOH HOH A . G 6 HOH 53 2053 2053 HOH HOH A . G 6 HOH 54 2054 2054 HOH HOH A . G 6 HOH 55 2055 2055 HOH HOH A . G 6 HOH 56 2056 2056 HOH HOH A . G 6 HOH 57 2057 2057 HOH HOH A . G 6 HOH 58 2058 2058 HOH HOH A . G 6 HOH 59 2059 2059 HOH HOH A . G 6 HOH 60 2060 2060 HOH HOH A . H 6 HOH 1 2001 2001 HOH HOH C . H 6 HOH 2 2002 2002 HOH HOH C . H 6 HOH 3 2003 2003 HOH HOH C . H 6 HOH 4 2004 2004 HOH HOH C . # _pdbx_struct_mod_residue.id 1 _pdbx_struct_mod_residue.label_asym_id B _pdbx_struct_mod_residue.label_comp_id MLY _pdbx_struct_mod_residue.label_seq_id 4 _pdbx_struct_mod_residue.auth_asym_id C _pdbx_struct_mod_residue.auth_comp_id MLY _pdbx_struct_mod_residue.auth_seq_id 4 _pdbx_struct_mod_residue.PDB_ins_code ? _pdbx_struct_mod_residue.parent_comp_id LYS _pdbx_struct_mod_residue.details N-DIMETHYL-LYSINE # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PQS _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 1680 ? 1 MORE -7.1 ? 1 'SSA (A^2)' 14110 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 SG ? A CYS 180 ? A CYS 3957 ? 1_555 ZN ? C ZN . ? A ZN 4970 ? 1_555 SG ? A CYS 182 ? A CYS 3959 ? 1_555 108.4 ? 2 SG ? A CYS 180 ? A CYS 3957 ? 1_555 ZN ? C ZN . ? A ZN 4970 ? 1_555 SG ? A CYS 132 ? A CYS 3909 ? 1_555 109.9 ? 3 SG ? A CYS 182 ? A CYS 3959 ? 1_555 ZN ? C ZN . ? A ZN 4970 ? 1_555 SG ? A CYS 132 ? A CYS 3909 ? 1_555 109.0 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2009-02-10 2 'Structure model' 1 1 2011-05-08 3 'Structure model' 1 2 2011-07-13 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal PHENIX refinement '(PHENIX.REFINE)' ? 1 MOSFLM 'data reduction' . ? 2 SCALEPACK 'data scaling' . ? 3 PHENIX phasing . ? 4 # _pdbx_entry_details.entry_id 2W5Z _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ;5'-DEOXY-S-ADENOSYL-L-HOMOCYSTEINE (SAH): ADOHCY ; _pdbx_entry_details.sequence_details ;CONSTRUCT USED FOR CRYSTALLISATION CONTAINS RESIDUES 3785 TO 3969 REISDUES 1 TO 8 C-TERMINAL TYR ADDED AT POSITION 9 ; # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASN A 3848 ? ? -36.49 132.42 2 1 ASN A 3900 ? ? -138.32 -156.16 3 1 ARG A 3936 ? ? -38.85 130.17 4 1 ILE A 3948 ? ? -62.61 99.18 5 1 ALA A 3951 ? ? 178.17 -95.33 6 1 SER A 3952 ? ? 55.26 167.91 7 1 ASN A 3953 ? ? 66.40 -13.17 8 1 LYS A 3966 ? ? 71.05 -34.88 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A GLU 3796 ? CG ? A GLU 19 CG 2 1 Y 1 A GLU 3796 ? CD ? A GLU 19 CD 3 1 Y 1 A GLU 3796 ? OE1 ? A GLU 19 OE1 4 1 Y 1 A GLU 3796 ? OE2 ? A GLU 19 OE2 5 1 Y 1 A GLU 3797 ? CG ? A GLU 20 CG 6 1 Y 1 A GLU 3797 ? CD ? A GLU 20 CD 7 1 Y 1 A GLU 3797 ? OE1 ? A GLU 20 OE1 8 1 Y 1 A GLU 3797 ? OE2 ? A GLU 20 OE2 9 1 Y 1 A ARG 3835 ? CG ? A ARG 58 CG 10 1 Y 1 A ARG 3835 ? CD ? A ARG 58 CD 11 1 Y 1 A ARG 3835 ? NE ? A ARG 58 NE 12 1 Y 1 A ARG 3835 ? CZ ? A ARG 58 CZ 13 1 Y 1 A ARG 3835 ? NH1 ? A ARG 58 NH1 14 1 Y 1 A ARG 3835 ? NH2 ? A ARG 58 NH2 15 1 Y 1 A ARG 3864 ? CG ? A ARG 87 CG 16 1 Y 1 A ARG 3864 ? CD ? A ARG 87 CD 17 1 Y 1 A ARG 3864 ? NE ? A ARG 87 NE 18 1 Y 1 A ARG 3864 ? CZ ? A ARG 87 CZ 19 1 Y 1 A ARG 3864 ? NH1 ? A ARG 87 NH1 20 1 Y 1 A ARG 3864 ? NH2 ? A ARG 87 NH2 21 1 Y 1 A LYS 3870 ? CG ? A LYS 93 CG 22 1 Y 1 A LYS 3870 ? CD ? A LYS 93 CD 23 1 Y 1 A LYS 3870 ? CE ? A LYS 93 CE 24 1 Y 1 A LYS 3870 ? NZ ? A LYS 93 NZ 25 1 Y 1 A LYS 3954 ? CG ? A LYS 177 CG 26 1 Y 1 A LYS 3954 ? CD ? A LYS 177 CD 27 1 Y 1 A LYS 3954 ? CE ? A LYS 177 CE 28 1 Y 1 A LYS 3954 ? NZ ? A LYS 177 NZ 29 1 Y 1 A LYS 3962 ? CG ? A LYS 185 CG 30 1 Y 1 A LYS 3962 ? CD ? A LYS 185 CD 31 1 Y 1 A LYS 3962 ? CE ? A LYS 185 CE 32 1 Y 1 A LYS 3962 ? NZ ? A LYS 185 NZ 33 1 Y 1 A LYS 3963 ? CG ? A LYS 186 CG 34 1 Y 1 A LYS 3963 ? CD ? A LYS 186 CD 35 1 Y 1 A LYS 3963 ? CE ? A LYS 186 CE 36 1 Y 1 A LYS 3963 ? NZ ? A LYS 186 NZ 37 1 Y 1 A LYS 3966 ? CG ? A LYS 189 CG 38 1 Y 1 A LYS 3966 ? CD ? A LYS 189 CD 39 1 Y 1 A LYS 3966 ? CE ? A LYS 189 CE 40 1 Y 1 A LYS 3966 ? NZ ? A LYS 189 NZ 41 1 Y 1 C ARG 2 ? CG ? B ARG 2 CG 42 1 Y 1 C ARG 2 ? CD ? B ARG 2 CD 43 1 Y 1 C ARG 2 ? NE ? B ARG 2 NE 44 1 Y 1 C ARG 2 ? CZ ? B ARG 2 CZ 45 1 Y 1 C ARG 2 ? NH1 ? B ARG 2 NH1 46 1 Y 1 C ARG 2 ? NH2 ? B ARG 2 NH2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 3778 ? A GLY 1 2 1 Y 1 A PRO 3779 ? A PRO 2 3 1 Y 1 A LEU 3780 ? A LEU 3 4 1 Y 1 A GLY 3781 ? A GLY 4 5 1 Y 1 A SER 3782 ? A SER 5 6 1 Y 1 A HIS 3783 ? A HIS 6 7 1 Y 1 A MET 3784 ? A MET 7 8 1 Y 1 A HIS 3785 ? A HIS 8 9 1 Y 1 A ARG 3786 ? A ARG 9 10 1 Y 1 A GLN 3787 ? A GLN 10 11 1 Y 1 A PRO 3788 ? A PRO 11 12 1 Y 1 A PRO 3789 ? A PRO 12 13 1 Y 1 C ALA 1 ? B ALA 1 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 3 'ZINC ION' ZN 4 S-ADENOSYL-L-HOMOCYSTEINE SAH 5 GLYCEROL GOL 6 water HOH #