HEADER IMMUNE SYSTEM 31-JAN-09 2WA0 TITLE CRYSTAL STRUCTURE OF THE HUMAN MAGEA4 COMPND MOL_ID: 1; COMPND 2 MOLECULE: MELANOMA-ASSOCIATED ANTIGEN 4; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: RESIDUES 101-317; COMPND 5 SYNONYM: MAGE-4 ANTIGEN, MAGE-X2 ANTIGEN, MAGE-41 ANTIGEN, COMPND 6 CANCER/TESTIS ANTIGEN 1.4, CT1.4; COMPND 7 ENGINEERED: YES; COMPND 8 OTHER_DETAILS: UNCLEAVED HISTAG SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_VARIANT: R3-PRARE2; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PNIC28-BSA4 KEYWDS IMMUNE SYSTEM, MULTIPLE ANOMALOUS DISPERSION, CANCER/TESTIS ANTIGEN KEYWDS 2 1.4, MELANOMA ANTIGEN FAMILY A 4, CT1.4, MAGE-41, MAGE-X2, TUMOR KEYWDS 3 ANTIGEN, MELANOMA-ASSOCIATED ANTIGEN 4 EXPDTA X-RAY DIFFRACTION AUTHOR A.K.ROOS,C.D.O.COOPER,E.UGOCHUKWU,W.W YUE,G.BERRIDGE,J.M.ELKINS, AUTHOR 2 A.C.W.PIKE,J.BRAY,P.FILIPPAKOPOULOS,J.MUNIZ,A.CHAIKUAD,N.BURGESS- AUTHOR 3 BROWN,C.H.ARROWSMITH,J.WEIGELT,A.EDWARDS,C.BOUNTRA,F.VON DELFT, AUTHOR 4 O.GILEADI,U.OPPERMANN REVDAT 6 24-JAN-18 2WA0 1 AUTHOR REVDAT 5 09-MAR-16 2WA0 1 JRNL REVDAT 4 29-APR-15 2WA0 1 REMARK REVDAT 3 13-JUL-11 2WA0 1 VERSN REVDAT 2 07-APR-09 2WA0 1 REMARK REVDAT 1 10-MAR-09 2WA0 0 JRNL AUTH J.A.NEWMAN,C.D.O.COOPER,A.K.ROOS,H.AITKENHEAD, JRNL AUTH 2 U.C.T.OPPERMANN,H.J.CHO,R.OSMAN,O.GILEADI JRNL TITL STRUCTURES OF TWO MELANOMA-ASSOCIATED ANTIGENS SUGGEST JRNL TITL 2 ALLOSTERIC REGULATION OF EFFECTOR BINDING. JRNL REF PLOS ONE V. 11 48762 2016 JRNL REFN ESSN 1932-6203 JRNL PMID 26910052 JRNL DOI 10.1371/JOURNAL.PONE.0148762 REMARK 2 REMARK 2 RESOLUTION. 2.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0070 REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.30 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 40.81 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 3 NUMBER OF REFLECTIONS : 18263 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.244 REMARK 3 R VALUE (WORKING SET) : 0.243 REMARK 3 FREE R VALUE : 0.274 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 978 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.30 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.36 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1295 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 98.13 REMARK 3 BIN R VALUE (WORKING SET) : 0.3860 REMARK 3 BIN FREE R VALUE SET COUNT : 72 REMARK 3 BIN FREE R VALUE : 0.4040 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1696 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 42 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : 57.40 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 38.88 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 2.53000 REMARK 3 B22 (A**2) : 2.53000 REMARK 3 B33 (A**2) : -3.80000 REMARK 3 B12 (A**2) : 1.27000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.224 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.199 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.170 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 16.207 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.941 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.930 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1738 ; 0.014 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 1182 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2349 ; 1.409 ; 1.975 REMARK 3 BOND ANGLES OTHERS (DEGREES): 2873 ; 0.895 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 213 ; 7.203 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 76 ;34.572 ;23.421 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 309 ;18.206 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 12 ;21.140 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 270 ; 0.079 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1894 ; 0.006 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 363 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1063 ; 2.455 ; 3.000 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 438 ; 0.562 ; 3.000 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1706 ; 4.500 ; 5.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 675 ; 6.837 ; 8.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 641 ; 9.755 ;11.000 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A -14 A -8 REMARK 3 ORIGIN FOR THE GROUP (A): 0.6790 33.1704 142.5691 REMARK 3 T TENSOR REMARK 3 T11: 0.2221 T22: 0.2334 REMARK 3 T33: 0.3220 T12: -0.0141 REMARK 3 T13: -0.1005 T23: -0.0173 REMARK 3 L TENSOR REMARK 3 L11: 0.8908 L22: 1.2542 REMARK 3 L33: 7.3988 L12: 1.0526 REMARK 3 L13: -2.5614 L23: -3.0453 REMARK 3 S TENSOR REMARK 3 S11: 0.0680 S12: -0.1097 S13: -0.0108 REMARK 3 S21: 0.1287 S22: -0.1223 S23: -0.0227 REMARK 3 S31: -0.2864 S32: 0.2948 S33: 0.0543 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A -4 A 101 REMARK 3 ORIGIN FOR THE GROUP (A): -10.3737 22.8135 129.4734 REMARK 3 T TENSOR REMARK 3 T11: 0.3370 T22: 0.4272 REMARK 3 T33: 0.2108 T12: 0.0362 REMARK 3 T13: -0.0216 T23: 0.0032 REMARK 3 L TENSOR REMARK 3 L11: 0.4169 L22: 2.0080 REMARK 3 L33: 0.9488 L12: 0.9149 REMARK 3 L13: -0.6266 L23: -1.3748 REMARK 3 S TENSOR REMARK 3 S11: 0.0971 S12: 0.0528 S13: 0.0930 REMARK 3 S21: 0.2846 S22: 0.0783 S23: 0.2090 REMARK 3 S31: -0.2100 S32: -0.1293 S33: -0.1753 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 102 A 208 REMARK 3 ORIGIN FOR THE GROUP (A): -23.8039 24.1762 100.1572 REMARK 3 T TENSOR REMARK 3 T11: 0.0970 T22: 0.0364 REMARK 3 T33: 0.0124 T12: -0.0045 REMARK 3 T13: -0.0130 T23: 0.0130 REMARK 3 L TENSOR REMARK 3 L11: 1.4118 L22: 2.3361 REMARK 3 L33: 2.1380 L12: 1.4144 REMARK 3 L13: 1.2643 L23: 0.7869 REMARK 3 S TENSOR REMARK 3 S11: 0.0178 S12: -0.0336 S13: 0.0731 REMARK 3 S21: -0.1313 S22: -0.1758 S23: 0.0266 REMARK 3 S31: -0.1408 S32: 0.1378 S33: 0.1580 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 209 A 312 REMARK 3 ORIGIN FOR THE GROUP (A): -33.4636 8.4542 94.4585 REMARK 3 T TENSOR REMARK 3 T11: 0.1173 T22: 0.0437 REMARK 3 T33: 0.0312 T12: 0.0341 REMARK 3 T13: -0.0219 T23: 0.0087 REMARK 3 L TENSOR REMARK 3 L11: 0.5544 L22: 1.5839 REMARK 3 L33: 1.6462 L12: 0.3339 REMARK 3 L13: 0.6576 L23: 0.3235 REMARK 3 S TENSOR REMARK 3 S11: 0.0177 S12: -0.1215 S13: -0.0616 REMARK 3 S21: -0.0907 S22: -0.0443 S23: 0.0630 REMARK 3 S31: 0.0951 S32: -0.1332 S33: 0.0266 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS. U VALUES RESIDUAL ONLY REMARK 4 REMARK 4 2WA0 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 31-JAN-09. REMARK 100 THE DEPOSITION ID IS D_1290038672. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 23-JAN-09; NULL REMARK 200 TEMPERATURE (KELVIN) : 100; 100 REMARK 200 PH : 8 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y; Y REMARK 200 RADIATION SOURCE : DIAMOND; SLS REMARK 200 BEAMLINE : I04; X10SA REMARK 200 X-RAY GENERATOR MODEL : NULL; NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M; M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9253; 0.9782, 0.97105, 0.9789 REMARK 200 MONOCHROMATOR : NULL; NULL REMARK 200 OPTICS : NULL; NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD; CCD REMARK 200 DETECTOR MANUFACTURER : ADSC CCD; MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 19314 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.300 REMARK 200 RESOLUTION RANGE LOW (A) : 42.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.200 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 200 DATA REDUNDANCY : 6.400 REMARK 200 R MERGE (I) : 0.07000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 13.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.30 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.42 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.1 REMARK 200 DATA REDUNDANCY IN SHELL : 5.00 REMARK 200 R MERGE FOR SHELL (I) : 0.54000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.200 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH; MAD REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MIRAS REMARK 200 SOFTWARE USED: SHELX, SHARP REMARK 200 STARTING MODEL: NONE REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 66.81 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.70 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 2.6 M NACL, 0.1 M TRIS PH 8 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 65 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+1/6 REMARK 290 6555 X-Y,X,Z+5/6 REMARK 290 7555 Y,X,-Z+2/3 REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z+1/3 REMARK 290 10555 -Y,-X,-Z+1/6 REMARK 290 11555 -X+Y,Y,-Z+1/2 REMARK 290 12555 X,X-Y,-Z+5/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 140.59400 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 70.29700 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 105.44550 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 35.14850 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 175.74250 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 140.59400 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 70.29700 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 35.14850 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 105.44550 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 175.74250 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PQS REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -22 REMARK 465 HIS A -21 REMARK 465 HIS A -20 REMARK 465 HIS A -19 REMARK 465 HIS A -18 REMARK 465 HIS A -17 REMARK 465 HIS A -16 REMARK 465 SER A -15 REMARK 465 GLU A -7 REMARK 465 ASN A -6 REMARK 465 LEU A -5 REMARK 465 PRO A 172 REMARK 465 THR A 173 REMARK 465 GLY A 192 REMARK 465 ASN A 193 REMARK 465 PRO A 263 REMARK 465 GLY A 264 REMARK 465 SER A 265 REMARK 465 ASN A 266 REMARK 465 PRO A 267 REMARK 465 ALA A 268 REMARK 465 GLU A 313 REMARK 465 GLU A 314 REMARK 465 GLU A 315 REMARK 465 GLY A 316 REMARK 465 VAL A 317 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 SER A -14 OG REMARK 470 ASP A -11 CG OD1 OD2 REMARK 470 GLN A -2 CG CD OE1 NE2 REMARK 470 LEU A 105 CD1 CD2 REMARK 470 GLU A 108 CD OE1 OE2 REMARK 470 ARG A 146 CZ NH1 NH2 REMARK 470 GLN A 195 CG CD OE1 NE2 REMARK 470 GLN A 261 CD OE1 NE2 REMARK 470 ARG A 269 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 312 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 VAL A -12 -158.21 -127.52 REMARK 500 LEU A -10 79.63 -104.24 REMARK 500 PHE A -3 -78.61 -68.92 REMARK 500 SER A -1 116.17 -169.69 REMARK 500 TYR A 144 39.68 -141.17 REMARK 500 ILE A 196 -70.50 -121.23 REMARK 500 GLU A 236 96.46 -68.78 REMARK 500 GLN A 249 -70.61 -117.44 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 PHE A -3 GLN A -2 143.50 REMARK 500 GLN A -2 SER A -1 140.56 REMARK 500 REMARK 500 REMARK: NULL REMARK 650 REMARK 650 HELIX REMARK 650 DETERMINATION METHOD: AUTHOR PROVIDED. REMARK 700 REMARK 700 SHEET REMARK 700 DETERMINATION METHOD: AUTHOR PROVIDED. REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1I4F RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF HLA-A*0201/MAGE-A4- PEPTIDE COMPLEX DBREF 2WA0 A -22 0 PDB 2WA0 2WA0 -22 0 DBREF 2WA0 A 101 317 UNP P43358 MAGA4_HUMAN 101 317 SEQRES 1 A 240 MET HIS HIS HIS HIS HIS HIS SER SER GLY VAL ASP LEU SEQRES 2 A 240 GLY THR GLU ASN LEU TYR PHE GLN SER MET ASP ALA GLU SEQRES 3 A 240 SER LEU PHE ARG GLU ALA LEU SER ASN LYS VAL ASP GLU SEQRES 4 A 240 LEU ALA HIS PHE LEU LEU ARG LYS TYR ARG ALA LYS GLU SEQRES 5 A 240 LEU VAL THR LYS ALA GLU MET LEU GLU ARG VAL ILE LYS SEQRES 6 A 240 ASN TYR LYS ARG CYS PHE PRO VAL ILE PHE GLY LYS ALA SEQRES 7 A 240 SER GLU SER LEU LYS MET ILE PHE GLY ILE ASP VAL LYS SEQRES 8 A 240 GLU VAL ASP PRO THR SER ASN THR TYR THR LEU VAL THR SEQRES 9 A 240 CYS LEU GLY LEU SER TYR ASP GLY LEU LEU GLY ASN ASN SEQRES 10 A 240 GLN ILE PHE PRO LYS THR GLY LEU LEU ILE ILE VAL LEU SEQRES 11 A 240 GLY THR ILE ALA MET GLU GLY ASP SER ALA SER GLU GLU SEQRES 12 A 240 GLU ILE TRP GLU GLU LEU GLY VAL MET GLY VAL TYR ASP SEQRES 13 A 240 GLY ARG GLU HIS THR VAL TYR GLY GLU PRO ARG LYS LEU SEQRES 14 A 240 LEU THR GLN ASP TRP VAL GLN GLU ASN TYR LEU GLU TYR SEQRES 15 A 240 ARG GLN VAL PRO GLY SER ASN PRO ALA ARG TYR GLU PHE SEQRES 16 A 240 LEU TRP GLY PRO ARG ALA LEU ALA GLU THR SER TYR VAL SEQRES 17 A 240 LYS VAL LEU GLU HIS VAL VAL ARG VAL ASN ALA ARG VAL SEQRES 18 A 240 ARG ILE ALA TYR PRO SER LEU ARG GLU ALA ALA LEU LEU SEQRES 19 A 240 GLU GLU GLU GLU GLY VAL FORMUL 2 HOH *42(H2 O) HELIX 1 1 ALA A 102 ARG A 126 1 25 HELIX 2 2 LYS A 133 ARG A 139 1 7 HELIX 3 3 LYS A 145 CYS A 147 5 3 HELIX 4 4 PHE A 148 PHE A 163 1 16 HELIX 5 5 CYS A 182 GLY A 184 5 3 HELIX 6 6 THR A 200 GLU A 213 1 14 HELIX 7 7 GLU A 219 VAL A 228 1 10 HELIX 8 8 PRO A 243 THR A 248 1 6 HELIX 9 9 ASP A 250 GLN A 253 1 4 HELIX 10 10 PRO A 276 GLU A 281 1 6 HELIX 11 11 TYR A 284 ASN A 295 1 12 HELIX 12 12 LEU A 305 ALA A 309 1 5 SHEET 1 AA 3 VAL A 131 THR A 132 0 SHEET 2 AA 3 THR A 176 THR A 181 -1 O TYR A 177 N VAL A 131 SHEET 3 AA 3 ILE A 165 VAL A 170 -1 O ASP A 166 N VAL A 180 SHEET 1 AB 3 ALA A 217 SER A 218 0 SHEET 2 AB 3 GLU A 271 TRP A 274 -1 O PHE A 272 N ALA A 217 SHEET 3 AB 3 LEU A 257 ARG A 260 -1 O GLU A 258 N LEU A 273 CISPEP 1 TYR A -4 PHE A -3 0 -16.89 CRYST1 81.630 81.630 210.891 90.00 90.00 120.00 P 65 2 2 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012250 0.007073 0.000000 0.00000 SCALE2 0.000000 0.014146 0.000000 0.00000 SCALE3 0.000000 0.000000 0.004742 0.00000