data_2X2K # _entry.id 2X2K # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.383 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2X2K pdb_00002x2k 10.2210/pdb2x2k/pdb PDBE EBI-36337 ? ? WWPDB D_1290036337 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.content_type _pdbx_database_related.details PDB 2IVU unspecified 'CRYSTAL STRUCTURE OF PHOSPHORYLATED RET TYROSINE KINASE DOMAIN COMPLEXED WITH THE INHIBITOR ZD6474' PDB 2IVT unspecified 'CRYSTAL STRUCTURE OF PHOSPHORYLATED RET TYROSINE KINASE DOMAIN' PDB 2IVS unspecified 'CRYSTAL STRUCTURE OF NON-PHOSPHORYLATED RET TYROSINE KINASE DOMAIN' PDB 2IVV unspecified 'CRYSTAL STRUCTURE OF PHOSPHORYLATED RET TYROSINE KINASE DOMAIN COMPLEXED WITH THE INHIBITOR PP1' PDB 2X2M unspecified 'CRYSTAL STRUCTURE OF PHOSPHORYLATED RET TYROSINE KINASE DOMAIN WITH INHIBITOR' PDB 2X2L unspecified 'CRYSTAL STRUCTURE OF PHOSPHORYLATED RET TYROSINE KINASE DOMAIN WITH INHIBITOR' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 2X2K _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.SG_entry . _pdbx_database_status.recvd_initial_deposition_date 2010-01-13 _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Knowles, P.P.' 1 'Murray-Rust, J.' 2 'Kjaer, S.' 3 'McDonald, N.Q.' 4 # _citation.id primary _citation.title 'Synthesis, structure-activity relationship and crystallographic studies of 3-substituted indolin-2-one RET inhibitors.' _citation.journal_abbrev 'Bioorg. Med. Chem.' _citation.journal_volume 18 _citation.page_first 1482 _citation.page_last 1496 _citation.year 2010 _citation.journal_id_ASTM BMECEP _citation.country UK _citation.journal_id_ISSN 1464-3391 _citation.journal_id_CSD 1200 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 20117004 _citation.pdbx_database_id_DOI 10.1016/j.bmc.2010.01.011 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Mologni, L.' 1 ? primary 'Rostagno, R.' 2 ? primary 'Brussolo, S.' 3 ? primary 'Knowles, P.P.' 4 ? primary 'Kjaer, S.' 5 ? primary 'Murray-Rust, J.' 6 ? primary 'Rosso, E.' 7 ? primary 'Zambon, A.' 8 ? primary 'Scapozza, L.' 9 ? primary 'McDonald, N.Q.' 10 ? primary 'Lucchini, V.' 11 ? primary 'Gambacorti-Passerini, C.' 12 ? # _cell.entry_id 2X2K _cell.length_a 71.600 _cell.length_b 70.912 _cell.length_c 78.871 _cell.angle_alpha 90.00 _cell.angle_beta 101.68 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2X2K _symmetry.space_group_name_H-M 'C 1 2 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'PROTO-ONCOGENE TYROSINE-PROTEIN KINASE RECEPTOR RET' 35788.215 1 2.7.10.1 ? 'TYROSINE KINASE DOMAIN, RESIDUES 705-1013' 'RESIDUES 705-1013,5 N-TERMINAL VECTOR-DERIVED RESIDUES GPLSL' 2 non-polymer syn 'FORMIC ACID' 46.025 3 ? ? ? ? 3 non-polymer syn '(3Z)-5-amino-3-[(3,5-dimethyl-1H-pyrrol-2-yl)methylidene]-1,3-dihydro-2H-indol-2-one' 253.299 1 ? ? ? ? 4 water nat water 18.015 28 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name C-RET # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;GPLSLSVDAFKILEDPKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVL KQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQIS QGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDS(PTR)VKRSQGRIPVKWMAIESLFDHIYTTQSDVW SFGVLLWEIVTLGGNPYPGIPPERLFNLLKTGHRMERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKMMVKRR ; _entity_poly.pdbx_seq_one_letter_code_can ;GPLSLSVDAFKILEDPKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVL KQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQIS QGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGV LLWEIVTLGGNPYPGIPPERLFNLLKTGHRMERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKMMVKRR ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 PRO n 1 3 LEU n 1 4 SER n 1 5 LEU n 1 6 SER n 1 7 VAL n 1 8 ASP n 1 9 ALA n 1 10 PHE n 1 11 LYS n 1 12 ILE n 1 13 LEU n 1 14 GLU n 1 15 ASP n 1 16 PRO n 1 17 LYS n 1 18 TRP n 1 19 GLU n 1 20 PHE n 1 21 PRO n 1 22 ARG n 1 23 LYS n 1 24 ASN n 1 25 LEU n 1 26 VAL n 1 27 LEU n 1 28 GLY n 1 29 LYS n 1 30 THR n 1 31 LEU n 1 32 GLY n 1 33 GLU n 1 34 GLY n 1 35 GLU n 1 36 PHE n 1 37 GLY n 1 38 LYS n 1 39 VAL n 1 40 VAL n 1 41 LYS n 1 42 ALA n 1 43 THR n 1 44 ALA n 1 45 PHE n 1 46 HIS n 1 47 LEU n 1 48 LYS n 1 49 GLY n 1 50 ARG n 1 51 ALA n 1 52 GLY n 1 53 TYR n 1 54 THR n 1 55 THR n 1 56 VAL n 1 57 ALA n 1 58 VAL n 1 59 LYS n 1 60 MET n 1 61 LEU n 1 62 LYS n 1 63 GLU n 1 64 ASN n 1 65 ALA n 1 66 SER n 1 67 PRO n 1 68 SER n 1 69 GLU n 1 70 LEU n 1 71 ARG n 1 72 ASP n 1 73 LEU n 1 74 LEU n 1 75 SER n 1 76 GLU n 1 77 PHE n 1 78 ASN n 1 79 VAL n 1 80 LEU n 1 81 LYS n 1 82 GLN n 1 83 VAL n 1 84 ASN n 1 85 HIS n 1 86 PRO n 1 87 HIS n 1 88 VAL n 1 89 ILE n 1 90 LYS n 1 91 LEU n 1 92 TYR n 1 93 GLY n 1 94 ALA n 1 95 CYS n 1 96 SER n 1 97 GLN n 1 98 ASP n 1 99 GLY n 1 100 PRO n 1 101 LEU n 1 102 LEU n 1 103 LEU n 1 104 ILE n 1 105 VAL n 1 106 GLU n 1 107 TYR n 1 108 ALA n 1 109 LYS n 1 110 TYR n 1 111 GLY n 1 112 SER n 1 113 LEU n 1 114 ARG n 1 115 GLY n 1 116 PHE n 1 117 LEU n 1 118 ARG n 1 119 GLU n 1 120 SER n 1 121 ARG n 1 122 LYS n 1 123 VAL n 1 124 GLY n 1 125 PRO n 1 126 GLY n 1 127 TYR n 1 128 LEU n 1 129 GLY n 1 130 SER n 1 131 GLY n 1 132 GLY n 1 133 SER n 1 134 ARG n 1 135 ASN n 1 136 SER n 1 137 SER n 1 138 SER n 1 139 LEU n 1 140 ASP n 1 141 HIS n 1 142 PRO n 1 143 ASP n 1 144 GLU n 1 145 ARG n 1 146 ALA n 1 147 LEU n 1 148 THR n 1 149 MET n 1 150 GLY n 1 151 ASP n 1 152 LEU n 1 153 ILE n 1 154 SER n 1 155 PHE n 1 156 ALA n 1 157 TRP n 1 158 GLN n 1 159 ILE n 1 160 SER n 1 161 GLN n 1 162 GLY n 1 163 MET n 1 164 GLN n 1 165 TYR n 1 166 LEU n 1 167 ALA n 1 168 GLU n 1 169 MET n 1 170 LYS n 1 171 LEU n 1 172 VAL n 1 173 HIS n 1 174 ARG n 1 175 ASP n 1 176 LEU n 1 177 ALA n 1 178 ALA n 1 179 ARG n 1 180 ASN n 1 181 ILE n 1 182 LEU n 1 183 VAL n 1 184 ALA n 1 185 GLU n 1 186 GLY n 1 187 ARG n 1 188 LYS n 1 189 MET n 1 190 LYS n 1 191 ILE n 1 192 SER n 1 193 ASP n 1 194 PHE n 1 195 GLY n 1 196 LEU n 1 197 SER n 1 198 ARG n 1 199 ASP n 1 200 VAL n 1 201 TYR n 1 202 GLU n 1 203 GLU n 1 204 ASP n 1 205 SER n 1 206 PTR n 1 207 VAL n 1 208 LYS n 1 209 ARG n 1 210 SER n 1 211 GLN n 1 212 GLY n 1 213 ARG n 1 214 ILE n 1 215 PRO n 1 216 VAL n 1 217 LYS n 1 218 TRP n 1 219 MET n 1 220 ALA n 1 221 ILE n 1 222 GLU n 1 223 SER n 1 224 LEU n 1 225 PHE n 1 226 ASP n 1 227 HIS n 1 228 ILE n 1 229 TYR n 1 230 THR n 1 231 THR n 1 232 GLN n 1 233 SER n 1 234 ASP n 1 235 VAL n 1 236 TRP n 1 237 SER n 1 238 PHE n 1 239 GLY n 1 240 VAL n 1 241 LEU n 1 242 LEU n 1 243 TRP n 1 244 GLU n 1 245 ILE n 1 246 VAL n 1 247 THR n 1 248 LEU n 1 249 GLY n 1 250 GLY n 1 251 ASN n 1 252 PRO n 1 253 TYR n 1 254 PRO n 1 255 GLY n 1 256 ILE n 1 257 PRO n 1 258 PRO n 1 259 GLU n 1 260 ARG n 1 261 LEU n 1 262 PHE n 1 263 ASN n 1 264 LEU n 1 265 LEU n 1 266 LYS n 1 267 THR n 1 268 GLY n 1 269 HIS n 1 270 ARG n 1 271 MET n 1 272 GLU n 1 273 ARG n 1 274 PRO n 1 275 ASP n 1 276 ASN n 1 277 CYS n 1 278 SER n 1 279 GLU n 1 280 GLU n 1 281 MET n 1 282 TYR n 1 283 ARG n 1 284 LEU n 1 285 MET n 1 286 LEU n 1 287 GLN n 1 288 CYS n 1 289 TRP n 1 290 LYS n 1 291 GLN n 1 292 GLU n 1 293 PRO n 1 294 ASP n 1 295 LYS n 1 296 ARG n 1 297 PRO n 1 298 VAL n 1 299 PHE n 1 300 ALA n 1 301 ASP n 1 302 ILE n 1 303 SER n 1 304 LYS n 1 305 ASP n 1 306 LEU n 1 307 GLU n 1 308 LYS n 1 309 MET n 1 310 MET n 1 311 VAL n 1 312 LYS n 1 313 ARG n 1 314 ARG n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name HUMAN _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'HOMO SAPIENS' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name 'FALL ARMYWORM' _entity_src_gen.pdbx_host_org_scientific_name 'SPODOPTERA FRUGIPERDA' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 7108 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line SF9 _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type BACULOVIRUS _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name 'PBACPAK-HIS3 (CLONTECH) MODIFIED' _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform 1 PDB 2X2K 1 ? ? 2X2K ? 2 UNP RET_HUMAN 1 ? ? P07949 ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 2X2K A 1 ? 5 ? 2X2K 700 ? 704 ? 700 704 2 2 2X2K A 6 ? 314 ? P07949 705 ? 1013 ? 705 1013 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 FMT non-polymer . 'FORMIC ACID' ? 'C H2 O2' 46.025 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 PTR 'L-peptide linking' n O-PHOSPHOTYROSINE PHOSPHONOTYROSINE 'C9 H12 N O6 P' 261.168 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 X2K non-polymer . '(3Z)-5-amino-3-[(3,5-dimethyl-1H-pyrrol-2-yl)methylidene]-1,3-dihydro-2H-indol-2-one' ? 'C15 H15 N3 O' 253.299 # _exptl.entry_id 2X2K _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.9 _exptl_crystal.density_percent_sol 57.7 _exptl_crystal.description NONE _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.temp 289 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH ? _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details ;PROTEIN 4.5 MG/ML IN 20 MM TRIS-HCL PH 8, 100MM NACL,1MM DTT, 1MM EDTA RESERVOIR 1.85 M SODIUM FORMATE, 0.1 SODIUM CITRATE PH 5.5, 0.2M LITHIUM CHLORIDE VAPOUR DIFFUSION, SITTING DROP, 289 K ; # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 _diffrn.pdbx_serial_crystal_experiment ? # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'IMAGE PLATE' _diffrn_detector.type MARRESEARCH _diffrn_detector.pdbx_collection_date 2007-07-29 _diffrn_detector.details MIRRORS # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.5418 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source 'ROTATING ANODE' _diffrn_source.type 'RIGAKU MICROMAX-007 HF' _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_wavelength 1.5418 _diffrn_source.pdbx_wavelength_list ? # _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.entry_id 2X2K _reflns.observed_criterion_sigma_I 0.0 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 21.64 _reflns.d_resolution_high 2.60 _reflns.number_obs 11886 _reflns.number_all ? _reflns.percent_possible_obs 99.1 _reflns.pdbx_Rmerge_I_obs 0.06 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 17.00 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 3.1 # _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_ordinal 1 _reflns_shell.d_res_high 2.60 _reflns_shell.d_res_low 2.74 _reflns_shell.percent_possible_all 100.0 _reflns_shell.Rmerge_I_obs 0.23 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 5.20 _reflns_shell.pdbx_redundancy 3.0 # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 2X2K _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 11316 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 30.00 _refine.ls_d_res_high 2.60 _refine.ls_percent_reflns_obs 98.9 _refine.ls_R_factor_obs 0.194 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.191 _refine.ls_R_factor_R_free 0.256 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 4.800 _refine.ls_number_reflns_R_free 569 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.936 _refine.correlation_coeff_Fo_to_Fc_free 0.884 _refine.B_iso_mean 39.50 _refine.aniso_B[1][1] 0.04000 _refine.aniso_B[2][2] 0.69000 _refine.aniso_B[3][3] -0.60000 _refine.aniso_B[1][2] 0.00000 _refine.aniso_B[1][3] 0.32000 _refine.aniso_B[2][3] 0.00000 _refine.solvent_model_details 'BABINET MODEL WITH MASK' _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.pdbx_starting_model 'PDB ENTRY 2IVT, FLEXIBLE LOOPS REMOVED' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.524 _refine.pdbx_overall_ESU_R_Free 0.306 _refine.overall_SU_ML 0.216 _refine.pdbx_overall_phase_error ? _refine.overall_SU_B 10.037 _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2234 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 28 _refine_hist.number_atoms_solvent 28 _refine_hist.number_atoms_total 2290 _refine_hist.d_res_high 2.60 _refine_hist.d_res_low 30.00 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.016 0.022 ? 2317 'X-RAY DIFFRACTION' ? r_bond_other_d ? ? ? ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.632 1.982 ? 3131 'X-RAY DIFFRACTION' ? r_angle_other_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 5.375 5.000 ? 289 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 35.201 23.218 ? 87 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 16.325 15.000 ? 395 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 22.424 15.000 ? 13 'X-RAY DIFFRACTION' ? r_chiral_restr 0.099 0.200 ? 346 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.005 0.020 ? 1697 'X-RAY DIFFRACTION' ? r_gen_planes_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_refined 0.205 0.200 ? 993 'X-RAY DIFFRACTION' ? r_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_refined 0.305 0.200 ? 1551 'X-RAY DIFFRACTION' ? r_nbtor_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 0.104 0.200 ? 73 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 0.196 0.200 ? 49 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 0.043 0.200 ? 4 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 0.774 1.500 ? 1490 'X-RAY DIFFRACTION' ? r_mcbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcangle_it 1.387 2.000 ? 2306 'X-RAY DIFFRACTION' ? r_mcangle_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_scbond_it 1.825 3.000 ? 978 'X-RAY DIFFRACTION' ? r_scbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_scangle_it 2.871 4.500 ? 824 'X-RAY DIFFRACTION' ? r_scangle_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_long_range_B_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_long_range_B_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 2.60 _refine_ls_shell.d_res_low 2.67 _refine_ls_shell.number_reflns_R_work 856 _refine_ls_shell.R_factor_R_work 0.2700 _refine_ls_shell.percent_reflns_obs 100.00 _refine_ls_shell.R_factor_R_free 0.3590 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 45 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? # _struct.entry_id 2X2K _struct.title 'Crystal Structure of phosphorylated RET tyrosine kinase domain with inhibitor' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2X2K _struct_keywords.pdbx_keywords TRANSFERASE _struct_keywords.text 'TYROSINE KINASE, HIRSCHSPRUNG DISEASE, TYROSINE-PROTEIN KINASE, PROTO-ONCOGENE, PHOSPHOPROTEIN, TRANSFERASE, PHOSPHOTRANSFERASE' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 2 ? D N N 2 ? E N N 3 ? F N N 4 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 GLY A 1 ? ASP A 8 ? GLY A 700 ASP A 707 1 ? 8 HELX_P HELX_P2 2 PRO A 21 ? LYS A 23 ? PRO A 720 LYS A 722 5 ? 3 HELX_P HELX_P3 3 SER A 66 ? LYS A 81 ? SER A 765 LYS A 780 1 ? 16 HELX_P HELX_P4 4 SER A 112 ? GLU A 119 ? SER A 811 GLU A 818 1 ? 8 HELX_P HELX_P5 5 THR A 148 ? MET A 169 ? THR A 847 MET A 868 1 ? 22 HELX_P HELX_P6 6 ALA A 177 ? ARG A 179 ? ALA A 876 ARG A 878 5 ? 3 HELX_P HELX_P7 7 GLU A 185 ? ARG A 187 ? GLU A 884 ARG A 886 5 ? 3 HELX_P HELX_P8 8 PRO A 215 ? MET A 219 ? PRO A 914 MET A 918 5 ? 5 HELX_P HELX_P9 9 ALA A 220 ? HIS A 227 ? ALA A 919 HIS A 926 1 ? 8 HELX_P HELX_P10 10 THR A 230 ? THR A 247 ? THR A 929 THR A 946 1 ? 18 HELX_P HELX_P11 11 PRO A 257 ? GLU A 259 ? PRO A 956 GLU A 958 5 ? 3 HELX_P HELX_P12 12 ARG A 260 ? THR A 267 ? ARG A 959 THR A 966 1 ? 8 HELX_P HELX_P13 13 SER A 278 ? TRP A 289 ? SER A 977 TRP A 988 1 ? 12 HELX_P HELX_P14 14 GLU A 292 ? ARG A 296 ? GLU A 991 ARG A 995 5 ? 5 HELX_P HELX_P15 15 VAL A 298 ? ARG A 314 ? VAL A 997 ARG A 1013 1 ? 17 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A SER 205 C ? ? ? 1_555 A PTR 206 N ? ? A SER 904 A PTR 905 1_555 ? ? ? ? ? ? ? 1.323 ? ? covale2 covale both ? A PTR 206 C ? ? ? 1_555 A VAL 207 N ? ? A PTR 905 A VAL 906 1_555 ? ? ? ? ? ? ? 1.324 ? ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA ? 5 ? AB ? 2 ? AC ? 2 ? AD ? 2 ? AE ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA 1 2 ? anti-parallel AA 2 3 ? anti-parallel AA 3 4 ? anti-parallel AA 4 5 ? anti-parallel AB 1 2 ? parallel AC 1 2 ? anti-parallel AD 1 2 ? anti-parallel AE 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA 1 LEU A 25 ? GLU A 33 ? LEU A 724 GLU A 732 AA 2 GLY A 37 ? LEU A 47 ? GLY A 736 LEU A 746 AA 3 ARG A 50 ? LEU A 61 ? ARG A 749 LEU A 760 AA 4 LEU A 102 ? GLU A 106 ? LEU A 801 GLU A 805 AA 5 LEU A 91 ? CYS A 95 ? LEU A 790 CYS A 794 AB 1 ARG A 121 ? LYS A 122 ? ARG A 820 LYS A 821 AB 2 ALA A 146 ? LEU A 147 ? ALA A 845 LEU A 846 AC 1 LEU A 171 ? VAL A 172 ? LEU A 870 VAL A 871 AC 2 ARG A 198 ? ASP A 199 ? ARG A 897 ASP A 898 AD 1 ILE A 181 ? ALA A 184 ? ILE A 880 ALA A 883 AD 2 LYS A 188 ? ILE A 191 ? LYS A 887 ILE A 890 AE 1 PTR A 206 ? VAL A 207 ? PTR A 905 VAL A 906 AE 2 ILE A 228 ? TYR A 229 ? ILE A 927 TYR A 928 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA 1 2 N LEU A 31 ? N LEU A 730 O VAL A 39 ? O VAL A 738 AA 2 3 N LEU A 47 ? N LEU A 746 O ARG A 50 ? O ARG A 749 AA 3 4 N LYS A 59 ? N LYS A 758 O LEU A 103 ? O LEU A 802 AA 4 5 O ILE A 104 ? O ILE A 803 N TYR A 92 ? N TYR A 791 AB 1 2 O ARG A 121 ? O ARG A 820 N LEU A 147 ? N LEU A 846 AC 1 2 N VAL A 172 ? N VAL A 871 O ARG A 198 ? O ARG A 897 AD 1 2 N ALA A 184 ? N ALA A 883 O LYS A 188 ? O LYS A 887 AE 1 2 N PTR A 206 ? N PTR A 905 O TYR A 229 ? O TYR A 928 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A FMT 2014 ? 5 'BINDING SITE FOR RESIDUE FMT A 2014' AC2 Software A FMT 2015 ? 5 'BINDING SITE FOR RESIDUE FMT A 2015' AC3 Software A FMT 2016 ? 8 'BINDING SITE FOR RESIDUE FMT A 2016' AC4 Software A X2K 2017 ? 11 'BINDING SITE FOR RESIDUE X2K A 2017' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 5 ARG A 22 ? ARG A 721 . ? 1_555 ? 2 AC1 5 ASP A 98 ? ASP A 797 . ? 1_555 ? 3 AC1 5 GLY A 99 ? GLY A 798 . ? 1_555 ? 4 AC1 5 PRO A 100 ? PRO A 799 . ? 1_555 ? 5 AC1 5 LEU A 102 ? LEU A 801 . ? 1_555 ? 6 AC2 5 ARG A 174 ? ARG A 873 . ? 1_555 ? 7 AC2 5 LEU A 196 ? LEU A 895 . ? 1_555 ? 8 AC2 5 LYS A 208 ? LYS A 907 . ? 1_555 ? 9 AC2 5 GLY A 212 ? GLY A 911 . ? 1_555 ? 10 AC2 5 ARG A 213 ? ARG A 912 . ? 1_555 ? 11 AC3 8 GLY A 1 ? GLY A 700 . ? 2_555 ? 12 AC3 8 PRO A 2 ? PRO A 701 . ? 2_555 ? 13 AC3 8 LEU A 3 ? LEU A 702 . ? 2_555 ? 14 AC3 8 SER A 4 ? SER A 703 . ? 2_555 ? 15 AC3 8 GLN A 211 ? GLN A 910 . ? 1_555 ? 16 AC3 8 LEU A 224 ? LEU A 923 . ? 1_555 ? 17 AC3 8 PHE A 225 ? PHE A 924 . ? 1_555 ? 18 AC3 8 HIS A 227 ? HIS A 926 . ? 1_555 ? 19 AC4 11 LEU A 31 ? LEU A 730 . ? 1_555 ? 20 AC4 11 VAL A 39 ? VAL A 738 . ? 1_555 ? 21 AC4 11 ALA A 57 ? ALA A 756 . ? 1_555 ? 22 AC4 11 LYS A 59 ? LYS A 758 . ? 1_555 ? 23 AC4 11 VAL A 105 ? VAL A 804 . ? 1_555 ? 24 AC4 11 GLU A 106 ? GLU A 805 . ? 1_555 ? 25 AC4 11 TYR A 107 ? TYR A 806 . ? 1_555 ? 26 AC4 11 ALA A 108 ? ALA A 807 . ? 1_555 ? 27 AC4 11 GLY A 111 ? GLY A 810 . ? 1_555 ? 28 AC4 11 LEU A 182 ? LEU A 881 . ? 1_555 ? 29 AC4 11 ASP A 193 ? ASP A 892 . ? 1_555 ? # _database_PDB_matrix.entry_id 2X2K _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 2X2K _atom_sites.fract_transf_matrix[1][1] 0.013966 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.002887 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.014102 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.012947 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 700 700 GLY GLY A . n A 1 2 PRO 2 701 701 PRO PRO A . n A 1 3 LEU 3 702 702 LEU LEU A . n A 1 4 SER 4 703 703 SER SER A . n A 1 5 LEU 5 704 704 LEU LEU A . n A 1 6 SER 6 705 705 SER SER A . n A 1 7 VAL 7 706 706 VAL VAL A . n A 1 8 ASP 8 707 707 ASP ASP A . n A 1 9 ALA 9 708 708 ALA ALA A . n A 1 10 PHE 10 709 709 PHE PHE A . n A 1 11 LYS 11 710 710 LYS LYS A . n A 1 12 ILE 12 711 711 ILE ILE A . n A 1 13 LEU 13 712 ? ? ? A . n A 1 14 GLU 14 713 ? ? ? A . n A 1 15 ASP 15 714 ? ? ? A . n A 1 16 PRO 16 715 715 PRO PRO A . n A 1 17 LYS 17 716 716 LYS LYS A . n A 1 18 TRP 18 717 717 TRP TRP A . n A 1 19 GLU 19 718 718 GLU GLU A . n A 1 20 PHE 20 719 719 PHE PHE A . n A 1 21 PRO 21 720 720 PRO PRO A . n A 1 22 ARG 22 721 721 ARG ARG A . n A 1 23 LYS 23 722 722 LYS LYS A . n A 1 24 ASN 24 723 723 ASN ASN A . n A 1 25 LEU 25 724 724 LEU LEU A . n A 1 26 VAL 26 725 725 VAL VAL A . n A 1 27 LEU 27 726 726 LEU LEU A . n A 1 28 GLY 28 727 727 GLY GLY A . n A 1 29 LYS 29 728 728 LYS LYS A . n A 1 30 THR 30 729 729 THR THR A . n A 1 31 LEU 31 730 730 LEU LEU A . n A 1 32 GLY 32 731 731 GLY GLY A . n A 1 33 GLU 33 732 732 GLU GLU A . n A 1 34 GLY 34 733 733 GLY GLY A . n A 1 35 GLU 35 734 734 GLU GLU A . n A 1 36 PHE 36 735 735 PHE PHE A . n A 1 37 GLY 37 736 736 GLY GLY A . n A 1 38 LYS 38 737 737 LYS LYS A . n A 1 39 VAL 39 738 738 VAL VAL A . n A 1 40 VAL 40 739 739 VAL VAL A . n A 1 41 LYS 41 740 740 LYS LYS A . n A 1 42 ALA 42 741 741 ALA ALA A . n A 1 43 THR 43 742 742 THR THR A . n A 1 44 ALA 44 743 743 ALA ALA A . n A 1 45 PHE 45 744 744 PHE PHE A . n A 1 46 HIS 46 745 745 HIS HIS A . n A 1 47 LEU 47 746 746 LEU LEU A . n A 1 48 LYS 48 747 747 LYS LYS A . n A 1 49 GLY 49 748 748 GLY GLY A . n A 1 50 ARG 50 749 749 ARG ARG A . n A 1 51 ALA 51 750 750 ALA ALA A . n A 1 52 GLY 52 751 751 GLY GLY A . n A 1 53 TYR 53 752 752 TYR TYR A . n A 1 54 THR 54 753 753 THR THR A . n A 1 55 THR 55 754 754 THR THR A . n A 1 56 VAL 56 755 755 VAL VAL A . n A 1 57 ALA 57 756 756 ALA ALA A . n A 1 58 VAL 58 757 757 VAL VAL A . n A 1 59 LYS 59 758 758 LYS LYS A . n A 1 60 MET 60 759 759 MET MET A . n A 1 61 LEU 61 760 760 LEU LEU A . n A 1 62 LYS 62 761 761 LYS LYS A . n A 1 63 GLU 63 762 762 GLU GLU A . n A 1 64 ASN 64 763 763 ASN ASN A . n A 1 65 ALA 65 764 764 ALA ALA A . n A 1 66 SER 66 765 765 SER SER A . n A 1 67 PRO 67 766 766 PRO PRO A . n A 1 68 SER 68 767 767 SER SER A . n A 1 69 GLU 69 768 768 GLU GLU A . n A 1 70 LEU 70 769 769 LEU LEU A . n A 1 71 ARG 71 770 770 ARG ARG A . n A 1 72 ASP 72 771 771 ASP ASP A . n A 1 73 LEU 73 772 772 LEU LEU A . n A 1 74 LEU 74 773 773 LEU LEU A . n A 1 75 SER 75 774 774 SER SER A . n A 1 76 GLU 76 775 775 GLU GLU A . n A 1 77 PHE 77 776 776 PHE PHE A . n A 1 78 ASN 78 777 777 ASN ASN A . n A 1 79 VAL 79 778 778 VAL VAL A . n A 1 80 LEU 80 779 779 LEU LEU A . n A 1 81 LYS 81 780 780 LYS LYS A . n A 1 82 GLN 82 781 781 GLN GLN A . n A 1 83 VAL 83 782 782 VAL VAL A . n A 1 84 ASN 84 783 783 ASN ASN A . n A 1 85 HIS 85 784 784 HIS HIS A . n A 1 86 PRO 86 785 785 PRO PRO A . n A 1 87 HIS 87 786 786 HIS HIS A . n A 1 88 VAL 88 787 787 VAL VAL A . n A 1 89 ILE 89 788 788 ILE ILE A . n A 1 90 LYS 90 789 789 LYS LYS A . n A 1 91 LEU 91 790 790 LEU LEU A . n A 1 92 TYR 92 791 791 TYR TYR A . n A 1 93 GLY 93 792 792 GLY GLY A . n A 1 94 ALA 94 793 793 ALA ALA A . n A 1 95 CYS 95 794 794 CYS CYS A . n A 1 96 SER 96 795 795 SER SER A . n A 1 97 GLN 97 796 796 GLN GLN A . n A 1 98 ASP 98 797 797 ASP ASP A . n A 1 99 GLY 99 798 798 GLY GLY A . n A 1 100 PRO 100 799 799 PRO PRO A . n A 1 101 LEU 101 800 800 LEU LEU A . n A 1 102 LEU 102 801 801 LEU LEU A . n A 1 103 LEU 103 802 802 LEU LEU A . n A 1 104 ILE 104 803 803 ILE ILE A . n A 1 105 VAL 105 804 804 VAL VAL A . n A 1 106 GLU 106 805 805 GLU GLU A . n A 1 107 TYR 107 806 806 TYR TYR A . n A 1 108 ALA 108 807 807 ALA ALA A . n A 1 109 LYS 109 808 808 LYS LYS A . n A 1 110 TYR 110 809 809 TYR TYR A . n A 1 111 GLY 111 810 810 GLY GLY A . n A 1 112 SER 112 811 811 SER SER A . n A 1 113 LEU 113 812 812 LEU LEU A . n A 1 114 ARG 114 813 813 ARG ARG A . n A 1 115 GLY 115 814 814 GLY GLY A . n A 1 116 PHE 116 815 815 PHE PHE A . n A 1 117 LEU 117 816 816 LEU LEU A . n A 1 118 ARG 118 817 817 ARG ARG A . n A 1 119 GLU 119 818 818 GLU GLU A . n A 1 120 SER 120 819 819 SER SER A . n A 1 121 ARG 121 820 820 ARG ARG A . n A 1 122 LYS 122 821 821 LYS LYS A . n A 1 123 VAL 123 822 822 VAL VAL A . n A 1 124 GLY 124 823 ? ? ? A . n A 1 125 PRO 125 824 ? ? ? A . n A 1 126 GLY 126 825 ? ? ? A . n A 1 127 TYR 127 826 ? ? ? A . n A 1 128 LEU 128 827 ? ? ? A . n A 1 129 GLY 129 828 ? ? ? A . n A 1 130 SER 130 829 ? ? ? A . n A 1 131 GLY 131 830 ? ? ? A . n A 1 132 GLY 132 831 ? ? ? A . n A 1 133 SER 133 832 ? ? ? A . n A 1 134 ARG 134 833 ? ? ? A . n A 1 135 ASN 135 834 ? ? ? A . n A 1 136 SER 136 835 ? ? ? A . n A 1 137 SER 137 836 ? ? ? A . n A 1 138 SER 138 837 ? ? ? A . n A 1 139 LEU 139 838 ? ? ? A . n A 1 140 ASP 140 839 ? ? ? A . n A 1 141 HIS 141 840 ? ? ? A . n A 1 142 PRO 142 841 ? ? ? A . n A 1 143 ASP 143 842 ? ? ? A . n A 1 144 GLU 144 843 ? ? ? A . n A 1 145 ARG 145 844 844 ARG ARG A . n A 1 146 ALA 146 845 845 ALA ALA A . n A 1 147 LEU 147 846 846 LEU LEU A . n A 1 148 THR 148 847 847 THR THR A . n A 1 149 MET 149 848 848 MET MET A . n A 1 150 GLY 150 849 849 GLY GLY A . n A 1 151 ASP 151 850 850 ASP ASP A . n A 1 152 LEU 152 851 851 LEU LEU A . n A 1 153 ILE 153 852 852 ILE ILE A . n A 1 154 SER 154 853 853 SER SER A . n A 1 155 PHE 155 854 854 PHE PHE A . n A 1 156 ALA 156 855 855 ALA ALA A . n A 1 157 TRP 157 856 856 TRP TRP A . n A 1 158 GLN 158 857 857 GLN GLN A . n A 1 159 ILE 159 858 858 ILE ILE A . n A 1 160 SER 160 859 859 SER SER A . n A 1 161 GLN 161 860 860 GLN GLN A . n A 1 162 GLY 162 861 861 GLY GLY A . n A 1 163 MET 163 862 862 MET MET A . n A 1 164 GLN 164 863 863 GLN GLN A . n A 1 165 TYR 165 864 864 TYR TYR A . n A 1 166 LEU 166 865 865 LEU LEU A . n A 1 167 ALA 167 866 866 ALA ALA A . n A 1 168 GLU 168 867 867 GLU GLU A . n A 1 169 MET 169 868 868 MET MET A . n A 1 170 LYS 170 869 869 LYS LYS A . n A 1 171 LEU 171 870 870 LEU LEU A . n A 1 172 VAL 172 871 871 VAL VAL A . n A 1 173 HIS 173 872 872 HIS HIS A . n A 1 174 ARG 174 873 873 ARG ARG A . n A 1 175 ASP 175 874 874 ASP ASP A . n A 1 176 LEU 176 875 875 LEU LEU A . n A 1 177 ALA 177 876 876 ALA ALA A . n A 1 178 ALA 178 877 877 ALA ALA A . n A 1 179 ARG 179 878 878 ARG ARG A . n A 1 180 ASN 180 879 879 ASN ASN A . n A 1 181 ILE 181 880 880 ILE ILE A . n A 1 182 LEU 182 881 881 LEU LEU A . n A 1 183 VAL 183 882 882 VAL VAL A . n A 1 184 ALA 184 883 883 ALA ALA A . n A 1 185 GLU 185 884 884 GLU GLU A . n A 1 186 GLY 186 885 885 GLY GLY A . n A 1 187 ARG 187 886 886 ARG ARG A . n A 1 188 LYS 188 887 887 LYS LYS A . n A 1 189 MET 189 888 888 MET MET A . n A 1 190 LYS 190 889 889 LYS LYS A . n A 1 191 ILE 191 890 890 ILE ILE A . n A 1 192 SER 192 891 891 SER SER A . n A 1 193 ASP 193 892 892 ASP ASP A . n A 1 194 PHE 194 893 893 PHE PHE A . n A 1 195 GLY 195 894 894 GLY GLY A . n A 1 196 LEU 196 895 895 LEU LEU A . n A 1 197 SER 197 896 896 SER SER A . n A 1 198 ARG 198 897 897 ARG ARG A . n A 1 199 ASP 199 898 898 ASP ASP A . n A 1 200 VAL 200 899 899 VAL VAL A . n A 1 201 TYR 201 900 900 TYR TYR A . n A 1 202 GLU 202 901 901 GLU GLU A . n A 1 203 GLU 203 902 902 GLU GLU A . n A 1 204 ASP 204 903 903 ASP ASP A . n A 1 205 SER 205 904 904 SER SER A . n A 1 206 PTR 206 905 905 PTR PTR A . n A 1 207 VAL 207 906 906 VAL VAL A . n A 1 208 LYS 208 907 907 LYS LYS A . n A 1 209 ARG 209 908 908 ARG ARG A . n A 1 210 SER 210 909 909 SER SER A . n A 1 211 GLN 211 910 910 GLN GLN A . n A 1 212 GLY 212 911 911 GLY GLY A . n A 1 213 ARG 213 912 912 ARG ARG A . n A 1 214 ILE 214 913 913 ILE ILE A . n A 1 215 PRO 215 914 914 PRO PRO A . n A 1 216 VAL 216 915 915 VAL VAL A . n A 1 217 LYS 217 916 916 LYS LYS A . n A 1 218 TRP 218 917 917 TRP TRP A . n A 1 219 MET 219 918 918 MET MET A . n A 1 220 ALA 220 919 919 ALA ALA A . n A 1 221 ILE 221 920 920 ILE ILE A . n A 1 222 GLU 222 921 921 GLU GLU A . n A 1 223 SER 223 922 922 SER SER A . n A 1 224 LEU 224 923 923 LEU LEU A . n A 1 225 PHE 225 924 924 PHE PHE A . n A 1 226 ASP 226 925 925 ASP ASP A . n A 1 227 HIS 227 926 926 HIS HIS A . n A 1 228 ILE 228 927 927 ILE ILE A . n A 1 229 TYR 229 928 928 TYR TYR A . n A 1 230 THR 230 929 929 THR THR A . n A 1 231 THR 231 930 930 THR THR A . n A 1 232 GLN 232 931 931 GLN GLN A . n A 1 233 SER 233 932 932 SER SER A . n A 1 234 ASP 234 933 933 ASP ASP A . n A 1 235 VAL 235 934 934 VAL VAL A . n A 1 236 TRP 236 935 935 TRP TRP A . n A 1 237 SER 237 936 936 SER SER A . n A 1 238 PHE 238 937 937 PHE PHE A . n A 1 239 GLY 239 938 938 GLY GLY A . n A 1 240 VAL 240 939 939 VAL VAL A . n A 1 241 LEU 241 940 940 LEU LEU A . n A 1 242 LEU 242 941 941 LEU LEU A . n A 1 243 TRP 243 942 942 TRP TRP A . n A 1 244 GLU 244 943 943 GLU GLU A . n A 1 245 ILE 245 944 944 ILE ILE A . n A 1 246 VAL 246 945 945 VAL VAL A . n A 1 247 THR 247 946 946 THR THR A . n A 1 248 LEU 248 947 947 LEU LEU A . n A 1 249 GLY 249 948 948 GLY GLY A . n A 1 250 GLY 250 949 949 GLY GLY A . n A 1 251 ASN 251 950 950 ASN ASN A . n A 1 252 PRO 252 951 951 PRO PRO A . n A 1 253 TYR 253 952 952 TYR TYR A . n A 1 254 PRO 254 953 953 PRO PRO A . n A 1 255 GLY 255 954 954 GLY GLY A . n A 1 256 ILE 256 955 955 ILE ILE A . n A 1 257 PRO 257 956 956 PRO PRO A . n A 1 258 PRO 258 957 957 PRO PRO A . n A 1 259 GLU 259 958 958 GLU GLU A . n A 1 260 ARG 260 959 959 ARG ARG A . n A 1 261 LEU 261 960 960 LEU LEU A . n A 1 262 PHE 262 961 961 PHE PHE A . n A 1 263 ASN 263 962 962 ASN ASN A . n A 1 264 LEU 264 963 963 LEU LEU A . n A 1 265 LEU 265 964 964 LEU LEU A . n A 1 266 LYS 266 965 965 LYS LYS A . n A 1 267 THR 267 966 966 THR THR A . n A 1 268 GLY 268 967 967 GLY GLY A . n A 1 269 HIS 269 968 968 HIS HIS A . n A 1 270 ARG 270 969 969 ARG ARG A . n A 1 271 MET 271 970 970 MET MET A . n A 1 272 GLU 272 971 971 GLU GLU A . n A 1 273 ARG 273 972 972 ARG ARG A . n A 1 274 PRO 274 973 973 PRO PRO A . n A 1 275 ASP 275 974 974 ASP ASP A . n A 1 276 ASN 276 975 975 ASN ASN A . n A 1 277 CYS 277 976 976 CYS CYS A . n A 1 278 SER 278 977 977 SER SER A . n A 1 279 GLU 279 978 978 GLU GLU A . n A 1 280 GLU 280 979 979 GLU GLU A . n A 1 281 MET 281 980 980 MET MET A . n A 1 282 TYR 282 981 981 TYR TYR A . n A 1 283 ARG 283 982 982 ARG ARG A . n A 1 284 LEU 284 983 983 LEU LEU A . n A 1 285 MET 285 984 984 MET MET A . n A 1 286 LEU 286 985 985 LEU LEU A . n A 1 287 GLN 287 986 986 GLN GLN A . n A 1 288 CYS 288 987 987 CYS CYS A . n A 1 289 TRP 289 988 988 TRP TRP A . n A 1 290 LYS 290 989 989 LYS LYS A . n A 1 291 GLN 291 990 990 GLN GLN A . n A 1 292 GLU 292 991 991 GLU GLU A . n A 1 293 PRO 293 992 992 PRO PRO A . n A 1 294 ASP 294 993 993 ASP ASP A . n A 1 295 LYS 295 994 994 LYS LYS A . n A 1 296 ARG 296 995 995 ARG ARG A . n A 1 297 PRO 297 996 996 PRO PRO A . n A 1 298 VAL 298 997 997 VAL VAL A . n A 1 299 PHE 299 998 998 PHE PHE A . n A 1 300 ALA 300 999 999 ALA ALA A . n A 1 301 ASP 301 1000 1000 ASP ASP A . n A 1 302 ILE 302 1001 1001 ILE ILE A . n A 1 303 SER 303 1002 1002 SER SER A . n A 1 304 LYS 304 1003 1003 LYS LYS A . n A 1 305 ASP 305 1004 1004 ASP ASP A . n A 1 306 LEU 306 1005 1005 LEU LEU A . n A 1 307 GLU 307 1006 1006 GLU GLU A . n A 1 308 LYS 308 1007 1007 LYS LYS A . n A 1 309 MET 309 1008 1008 MET MET A . n A 1 310 MET 310 1009 1009 MET MET A . n A 1 311 VAL 311 1010 1010 VAL VAL A . n A 1 312 LYS 312 1011 1011 LYS LYS A . n A 1 313 ARG 313 1012 1012 ARG ARG A . n A 1 314 ARG 314 1013 1013 ARG ARG A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 FMT 1 2014 2014 FMT FMT A . C 2 FMT 1 2015 2015 FMT FMT A . D 2 FMT 1 2016 2016 FMT FMT A . E 3 X2K 1 2017 2017 X2K X2K A . F 4 HOH 1 3001 3001 HOH HOH A . F 4 HOH 2 3002 3002 HOH HOH A . F 4 HOH 3 3003 3003 HOH HOH A . F 4 HOH 4 3004 3004 HOH HOH A . F 4 HOH 5 3005 3005 HOH HOH A . F 4 HOH 6 3006 3006 HOH HOH A . F 4 HOH 7 3007 3007 HOH HOH A . F 4 HOH 8 3008 3008 HOH HOH A . F 4 HOH 9 3009 3009 HOH HOH A . F 4 HOH 10 3010 3010 HOH HOH A . F 4 HOH 11 3011 3011 HOH HOH A . F 4 HOH 12 3012 3012 HOH HOH A . F 4 HOH 13 3013 3013 HOH HOH A . F 4 HOH 14 3014 3014 HOH HOH A . F 4 HOH 15 3015 3015 HOH HOH A . F 4 HOH 16 3016 3016 HOH HOH A . F 4 HOH 17 3017 3017 HOH HOH A . F 4 HOH 18 3018 3018 HOH HOH A . F 4 HOH 19 3019 3019 HOH HOH A . F 4 HOH 20 3020 3020 HOH HOH A . F 4 HOH 21 3021 3021 HOH HOH A . F 4 HOH 22 3022 3022 HOH HOH A . F 4 HOH 23 3023 3023 HOH HOH A . F 4 HOH 24 3024 3024 HOH HOH A . F 4 HOH 25 3025 3025 HOH HOH A . F 4 HOH 26 3026 3026 HOH HOH A . F 4 HOH 27 3027 3027 HOH HOH A . F 4 HOH 28 3028 3028 HOH HOH A . # _pdbx_struct_mod_residue.id 1 _pdbx_struct_mod_residue.label_asym_id A _pdbx_struct_mod_residue.label_comp_id PTR _pdbx_struct_mod_residue.label_seq_id 206 _pdbx_struct_mod_residue.auth_asym_id A _pdbx_struct_mod_residue.auth_comp_id PTR _pdbx_struct_mod_residue.auth_seq_id 905 _pdbx_struct_mod_residue.PDB_ins_code ? _pdbx_struct_mod_residue.parent_comp_id TYR _pdbx_struct_mod_residue.details O-PHOSPHOTYROSINE # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 4050 ? 1 MORE -19.0 ? 1 'SSA (A^2)' 24150 ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 2_555 -x,y,-z -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2010-02-09 2 'Structure model' 1 1 2017-06-28 3 'Structure model' 1 2 2018-04-18 4 'Structure model' 1 3 2019-01-30 5 'Structure model' 1 4 2019-05-08 6 'Structure model' 1 5 2023-12-20 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' 4 4 'Structure model' 'Data collection' 5 4 'Structure model' 'Experimental preparation' 6 5 'Structure model' 'Data collection' 7 5 'Structure model' 'Derived calculations' 8 5 'Structure model' 'Experimental preparation' 9 6 'Structure model' 'Data collection' 10 6 'Structure model' 'Database references' 11 6 'Structure model' 'Derived calculations' 12 6 'Structure model' Other 13 6 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' diffrn_source 2 3 'Structure model' citation 3 3 'Structure model' citation_author 4 4 'Structure model' exptl_crystal_grow 5 5 'Structure model' exptl_crystal_grow 6 5 'Structure model' struct_conn 7 6 'Structure model' chem_comp_atom 8 6 'Structure model' chem_comp_bond 9 6 'Structure model' database_2 10 6 'Structure model' pdbx_database_status 11 6 'Structure model' pdbx_initial_refinement_model 12 6 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_diffrn_source.type' 2 3 'Structure model' '_citation.journal_abbrev' 3 3 'Structure model' '_citation.journal_id_ISSN' 4 3 'Structure model' '_citation.page_last' 5 3 'Structure model' '_citation.pdbx_database_id_DOI' 6 3 'Structure model' '_citation.title' 7 3 'Structure model' '_citation_author.name' 8 4 'Structure model' '_exptl_crystal_grow.method' 9 5 'Structure model' '_exptl_crystal_grow.temp' 10 5 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 11 6 'Structure model' '_database_2.pdbx_DOI' 12 6 'Structure model' '_database_2.pdbx_database_accession' 13 6 'Structure model' '_pdbx_database_status.status_code_sf' 14 6 'Structure model' '_struct_site.pdbx_auth_asym_id' 15 6 'Structure model' '_struct_site.pdbx_auth_comp_id' 16 6 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal _software.date _software.type _software.location _software.language REFMAC refinement 5.2.0019 ? 1 ? ? ? ? MOSFLM 'data reduction' . ? 2 ? ? ? ? SCALA 'data scaling' . ? 3 ? ? ? ? MOLREP phasing . ? 4 ? ? ? ? # _pdbx_entry_details.entry_id 2X2K _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ;705-1013 CORRESPOND WITH P07949, 700-704 ARE VECTOR- DERIVED ; _pdbx_entry_details.has_ligand_of_interest ? # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 LYS A 710 ? ? -75.27 27.69 2 1 GLU A 734 ? ? -89.37 49.81 3 1 PHE A 735 ? ? 136.95 -22.01 4 1 LYS A 747 ? ? 39.01 63.36 5 1 LYS A 869 ? ? 71.33 48.60 6 1 ARG A 873 ? ? 77.27 -30.21 7 1 SER A 891 ? ? -126.80 -166.03 8 1 ASP A 892 ? ? 48.44 88.27 9 1 ASP A 892 ? ? 45.19 90.60 10 1 GLU A 901 ? ? 161.48 -67.85 11 1 ASP A 903 ? ? 58.64 12.69 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A ALA 708 ? O ? A ALA 9 O 2 1 Y 1 A ILE 711 ? CG1 ? A ILE 12 CG1 3 1 Y 1 A ILE 711 ? CG2 ? A ILE 12 CG2 4 1 Y 1 A ILE 711 ? CD1 ? A ILE 12 CD1 5 1 Y 1 A LYS 722 ? CD ? A LYS 23 CD 6 1 Y 1 A LYS 722 ? CE ? A LYS 23 CE 7 1 Y 1 A LYS 722 ? NZ ? A LYS 23 NZ 8 1 Y 1 A GLU 732 ? CD ? A GLU 33 CD 9 1 Y 1 A GLU 732 ? OE1 ? A GLU 33 OE1 10 1 Y 1 A GLU 732 ? OE2 ? A GLU 33 OE2 11 1 Y 1 A GLU 734 ? CG ? A GLU 35 CG 12 1 Y 1 A GLU 734 ? CD ? A GLU 35 CD 13 1 Y 1 A GLU 734 ? OE1 ? A GLU 35 OE1 14 1 Y 1 A GLU 734 ? OE2 ? A GLU 35 OE2 15 1 Y 1 A LYS 761 ? NZ ? A LYS 62 NZ 16 1 Y 1 A GLU 762 ? CD ? A GLU 63 CD 17 1 Y 1 A GLU 762 ? OE1 ? A GLU 63 OE1 18 1 Y 1 A GLU 762 ? OE2 ? A GLU 63 OE2 19 1 Y 1 A LYS 789 ? CD ? A LYS 90 CD 20 1 Y 1 A LYS 789 ? CE ? A LYS 90 CE 21 1 Y 1 A LYS 789 ? NZ ? A LYS 90 NZ 22 1 Y 1 A GLN 796 ? CG ? A GLN 97 CG 23 1 Y 1 A GLN 796 ? CD ? A GLN 97 CD 24 1 Y 1 A GLN 796 ? OE1 ? A GLN 97 OE1 25 1 Y 1 A GLN 796 ? NE2 ? A GLN 97 NE2 26 1 Y 1 A ARG 813 ? CZ ? A ARG 114 CZ 27 1 Y 1 A ARG 813 ? NH1 ? A ARG 114 NH1 28 1 Y 1 A ARG 813 ? NH2 ? A ARG 114 NH2 29 1 Y 1 A ARG 820 ? CG ? A ARG 121 CG 30 1 Y 1 A ARG 820 ? CD ? A ARG 121 CD 31 1 Y 1 A ARG 820 ? NE ? A ARG 121 NE 32 1 Y 1 A ARG 820 ? CZ ? A ARG 121 CZ 33 1 Y 1 A ARG 820 ? NH1 ? A ARG 121 NH1 34 1 Y 1 A ARG 820 ? NH2 ? A ARG 121 NH2 35 1 Y 1 A LYS 821 ? CG ? A LYS 122 CG 36 1 Y 1 A LYS 821 ? CD ? A LYS 122 CD 37 1 Y 1 A LYS 821 ? CE ? A LYS 122 CE 38 1 Y 1 A LYS 821 ? NZ ? A LYS 122 NZ 39 1 Y 1 A ARG 844 ? CD ? A ARG 145 CD 40 1 Y 1 A ARG 844 ? NE ? A ARG 145 NE 41 1 Y 1 A ARG 844 ? CZ ? A ARG 145 CZ 42 1 Y 1 A ARG 844 ? NH1 ? A ARG 145 NH1 43 1 Y 1 A ARG 844 ? NH2 ? A ARG 145 NH2 44 1 Y 1 A GLU 867 ? CD ? A GLU 168 CD 45 1 Y 1 A GLU 867 ? OE1 ? A GLU 168 OE1 46 1 Y 1 A GLU 867 ? OE2 ? A GLU 168 OE2 47 1 Y 1 A GLU 884 ? CG ? A GLU 185 CG 48 1 Y 1 A GLU 884 ? CD ? A GLU 185 CD 49 1 Y 1 A GLU 884 ? OE1 ? A GLU 185 OE1 50 1 Y 1 A GLU 884 ? OE2 ? A GLU 185 OE2 51 1 Y 1 A TYR 900 ? O ? A TYR 201 O 52 1 Y 1 A TYR 900 ? CD1 ? A TYR 201 CD1 53 1 Y 1 A TYR 900 ? CD2 ? A TYR 201 CD2 54 1 Y 1 A TYR 900 ? CE1 ? A TYR 201 CE1 55 1 Y 1 A TYR 900 ? CE2 ? A TYR 201 CE2 56 1 Y 1 A TYR 900 ? CZ ? A TYR 201 CZ 57 1 Y 1 A TYR 900 ? OH ? A TYR 201 OH 58 1 Y 1 A GLU 901 ? CD ? A GLU 202 CD 59 1 Y 1 A GLU 901 ? OE1 ? A GLU 202 OE1 60 1 Y 1 A GLU 901 ? OE2 ? A GLU 202 OE2 61 1 Y 1 A GLU 902 ? CD ? A GLU 203 CD 62 1 Y 1 A GLU 902 ? OE1 ? A GLU 203 OE1 63 1 Y 1 A GLU 902 ? OE2 ? A GLU 203 OE2 64 1 Y 1 A ARG 959 ? CD ? A ARG 260 CD 65 1 Y 1 A ARG 959 ? NE ? A ARG 260 NE 66 1 Y 1 A ARG 959 ? CZ ? A ARG 260 CZ 67 1 Y 1 A ARG 959 ? NH1 ? A ARG 260 NH1 68 1 Y 1 A ARG 959 ? NH2 ? A ARG 260 NH2 69 1 Y 1 A LYS 965 ? CE ? A LYS 266 CE 70 1 Y 1 A LYS 965 ? NZ ? A LYS 266 NZ 71 1 Y 1 A GLU 978 ? CG ? A GLU 279 CG 72 1 Y 1 A GLU 978 ? CD ? A GLU 279 CD 73 1 Y 1 A GLU 978 ? OE1 ? A GLU 279 OE1 74 1 Y 1 A GLU 978 ? OE2 ? A GLU 279 OE2 75 1 Y 1 A GLU 979 ? CG ? A GLU 280 CG 76 1 Y 1 A GLU 979 ? CD ? A GLU 280 CD 77 1 Y 1 A GLU 979 ? OE1 ? A GLU 280 OE1 78 1 Y 1 A GLU 979 ? OE2 ? A GLU 280 OE2 79 1 Y 1 A ARG 982 ? CD ? A ARG 283 CD 80 1 Y 1 A ARG 982 ? NE ? A ARG 283 NE 81 1 Y 1 A ARG 982 ? CZ ? A ARG 283 CZ 82 1 Y 1 A ARG 982 ? NH1 ? A ARG 283 NH1 83 1 Y 1 A ARG 982 ? NH2 ? A ARG 283 NH2 84 1 Y 1 A LYS 989 ? CE ? A LYS 290 CE 85 1 Y 1 A LYS 989 ? NZ ? A LYS 290 NZ 86 1 Y 1 A GLU 991 ? CG ? A GLU 292 CG 87 1 Y 1 A GLU 991 ? CD ? A GLU 292 CD 88 1 Y 1 A GLU 991 ? OE1 ? A GLU 292 OE1 89 1 Y 1 A GLU 991 ? OE2 ? A GLU 292 OE2 90 1 Y 1 A LYS 994 ? CD ? A LYS 295 CD 91 1 Y 1 A LYS 994 ? CE ? A LYS 295 CE 92 1 Y 1 A LYS 994 ? NZ ? A LYS 295 NZ 93 1 Y 1 A LYS 1003 ? CD ? A LYS 304 CD 94 1 Y 1 A LYS 1003 ? CE ? A LYS 304 CE 95 1 Y 1 A LYS 1003 ? NZ ? A LYS 304 NZ 96 1 Y 1 A ARG 1012 ? CG ? A ARG 313 CG 97 1 Y 1 A ARG 1012 ? CD ? A ARG 313 CD 98 1 Y 1 A ARG 1012 ? NE ? A ARG 313 NE 99 1 Y 1 A ARG 1012 ? CZ ? A ARG 313 CZ 100 1 Y 1 A ARG 1012 ? NH1 ? A ARG 313 NH1 101 1 Y 1 A ARG 1012 ? NH2 ? A ARG 313 NH2 102 1 Y 1 A ARG 1013 ? CG ? A ARG 314 CG 103 1 Y 1 A ARG 1013 ? CD ? A ARG 314 CD 104 1 Y 1 A ARG 1013 ? NE ? A ARG 314 NE 105 1 Y 1 A ARG 1013 ? CZ ? A ARG 314 CZ 106 1 Y 1 A ARG 1013 ? NH1 ? A ARG 314 NH1 107 1 Y 1 A ARG 1013 ? NH2 ? A ARG 314 NH2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A LEU 712 ? A LEU 13 2 1 Y 1 A GLU 713 ? A GLU 14 3 1 Y 1 A ASP 714 ? A ASP 15 4 1 Y 1 A GLY 823 ? A GLY 124 5 1 Y 1 A PRO 824 ? A PRO 125 6 1 Y 1 A GLY 825 ? A GLY 126 7 1 Y 1 A TYR 826 ? A TYR 127 8 1 Y 1 A LEU 827 ? A LEU 128 9 1 Y 1 A GLY 828 ? A GLY 129 10 1 Y 1 A SER 829 ? A SER 130 11 1 Y 1 A GLY 830 ? A GLY 131 12 1 Y 1 A GLY 831 ? A GLY 132 13 1 Y 1 A SER 832 ? A SER 133 14 1 Y 1 A ARG 833 ? A ARG 134 15 1 Y 1 A ASN 834 ? A ASN 135 16 1 Y 1 A SER 835 ? A SER 136 17 1 Y 1 A SER 836 ? A SER 137 18 1 Y 1 A SER 837 ? A SER 138 19 1 Y 1 A LEU 838 ? A LEU 139 20 1 Y 1 A ASP 839 ? A ASP 140 21 1 Y 1 A HIS 840 ? A HIS 141 22 1 Y 1 A PRO 841 ? A PRO 142 23 1 Y 1 A ASP 842 ? A ASP 143 24 1 Y 1 A GLU 843 ? A GLU 144 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 FMT C C N N 88 FMT O1 O N N 89 FMT O2 O N N 90 FMT H H N N 91 FMT HO2 H N N 92 GLN N N N N 93 GLN CA C N S 94 GLN C C N N 95 GLN O O N N 96 GLN CB C N N 97 GLN CG C N N 98 GLN CD C N N 99 GLN OE1 O N N 100 GLN NE2 N N N 101 GLN OXT O N N 102 GLN H H N N 103 GLN H2 H N N 104 GLN HA H N N 105 GLN HB2 H N N 106 GLN HB3 H N N 107 GLN HG2 H N N 108 GLN HG3 H N N 109 GLN HE21 H N N 110 GLN HE22 H N N 111 GLN HXT H N N 112 GLU N N N N 113 GLU CA C N S 114 GLU C C N N 115 GLU O O N N 116 GLU CB C N N 117 GLU CG C N N 118 GLU CD C N N 119 GLU OE1 O N N 120 GLU OE2 O N N 121 GLU OXT O N N 122 GLU H H N N 123 GLU H2 H N N 124 GLU HA H N N 125 GLU HB2 H N N 126 GLU HB3 H N N 127 GLU HG2 H N N 128 GLU HG3 H N N 129 GLU HE2 H N N 130 GLU HXT H N N 131 GLY N N N N 132 GLY CA C N N 133 GLY C C N N 134 GLY O O N N 135 GLY OXT O N N 136 GLY H H N N 137 GLY H2 H N N 138 GLY HA2 H N N 139 GLY HA3 H N N 140 GLY HXT H N N 141 HIS N N N N 142 HIS CA C N S 143 HIS C C N N 144 HIS O O N N 145 HIS CB C N N 146 HIS CG C Y N 147 HIS ND1 N Y N 148 HIS CD2 C Y N 149 HIS CE1 C Y N 150 HIS NE2 N Y N 151 HIS OXT O N N 152 HIS H H N N 153 HIS H2 H N N 154 HIS HA H N N 155 HIS HB2 H N N 156 HIS HB3 H N N 157 HIS HD1 H N N 158 HIS HD2 H N N 159 HIS HE1 H N N 160 HIS HE2 H N N 161 HIS HXT H N N 162 HOH O O N N 163 HOH H1 H N N 164 HOH H2 H N N 165 ILE N N N N 166 ILE CA C N S 167 ILE C C N N 168 ILE O O N N 169 ILE CB C N S 170 ILE CG1 C N N 171 ILE CG2 C N N 172 ILE CD1 C N N 173 ILE OXT O N N 174 ILE H H N N 175 ILE H2 H N N 176 ILE HA H N N 177 ILE HB H N N 178 ILE HG12 H N N 179 ILE HG13 H N N 180 ILE HG21 H N N 181 ILE HG22 H N N 182 ILE HG23 H N N 183 ILE HD11 H N N 184 ILE HD12 H N N 185 ILE HD13 H N N 186 ILE HXT H N N 187 LEU N N N N 188 LEU CA C N S 189 LEU C C N N 190 LEU O O N N 191 LEU CB C N N 192 LEU CG C N N 193 LEU CD1 C N N 194 LEU CD2 C N N 195 LEU OXT O N N 196 LEU H H N N 197 LEU H2 H N N 198 LEU HA H N N 199 LEU HB2 H N N 200 LEU HB3 H N N 201 LEU HG H N N 202 LEU HD11 H N N 203 LEU HD12 H N N 204 LEU HD13 H N N 205 LEU HD21 H N N 206 LEU HD22 H N N 207 LEU HD23 H N N 208 LEU HXT H N N 209 LYS N N N N 210 LYS CA C N S 211 LYS C C N N 212 LYS O O N N 213 LYS CB C N N 214 LYS CG C N N 215 LYS CD C N N 216 LYS CE C N N 217 LYS NZ N N N 218 LYS OXT O N N 219 LYS H H N N 220 LYS H2 H N N 221 LYS HA H N N 222 LYS HB2 H N N 223 LYS HB3 H N N 224 LYS HG2 H N N 225 LYS HG3 H N N 226 LYS HD2 H N N 227 LYS HD3 H N N 228 LYS HE2 H N N 229 LYS HE3 H N N 230 LYS HZ1 H N N 231 LYS HZ2 H N N 232 LYS HZ3 H N N 233 LYS HXT H N N 234 MET N N N N 235 MET CA C N S 236 MET C C N N 237 MET O O N N 238 MET CB C N N 239 MET CG C N N 240 MET SD S N N 241 MET CE C N N 242 MET OXT O N N 243 MET H H N N 244 MET H2 H N N 245 MET HA H N N 246 MET HB2 H N N 247 MET HB3 H N N 248 MET HG2 H N N 249 MET HG3 H N N 250 MET HE1 H N N 251 MET HE2 H N N 252 MET HE3 H N N 253 MET HXT H N N 254 PHE N N N N 255 PHE CA C N S 256 PHE C C N N 257 PHE O O N N 258 PHE CB C N N 259 PHE CG C Y N 260 PHE CD1 C Y N 261 PHE CD2 C Y N 262 PHE CE1 C Y N 263 PHE CE2 C Y N 264 PHE CZ C Y N 265 PHE OXT O N N 266 PHE H H N N 267 PHE H2 H N N 268 PHE HA H N N 269 PHE HB2 H N N 270 PHE HB3 H N N 271 PHE HD1 H N N 272 PHE HD2 H N N 273 PHE HE1 H N N 274 PHE HE2 H N N 275 PHE HZ H N N 276 PHE HXT H N N 277 PRO N N N N 278 PRO CA C N S 279 PRO C C N N 280 PRO O O N N 281 PRO CB C N N 282 PRO CG C N N 283 PRO CD C N N 284 PRO OXT O N N 285 PRO H H N N 286 PRO HA H N N 287 PRO HB2 H N N 288 PRO HB3 H N N 289 PRO HG2 H N N 290 PRO HG3 H N N 291 PRO HD2 H N N 292 PRO HD3 H N N 293 PRO HXT H N N 294 PTR N N N N 295 PTR CA C N S 296 PTR C C N N 297 PTR O O N N 298 PTR OXT O N N 299 PTR CB C N N 300 PTR CG C Y N 301 PTR CD1 C Y N 302 PTR CD2 C Y N 303 PTR CE1 C Y N 304 PTR CE2 C Y N 305 PTR CZ C Y N 306 PTR OH O N N 307 PTR P P N N 308 PTR O1P O N N 309 PTR O2P O N N 310 PTR O3P O N N 311 PTR H H N N 312 PTR H2 H N N 313 PTR HA H N N 314 PTR HXT H N N 315 PTR HB2 H N N 316 PTR HB3 H N N 317 PTR HD1 H N N 318 PTR HD2 H N N 319 PTR HE1 H N N 320 PTR HE2 H N N 321 PTR HO2P H N N 322 PTR HO3P H N N 323 SER N N N N 324 SER CA C N S 325 SER C C N N 326 SER O O N N 327 SER CB C N N 328 SER OG O N N 329 SER OXT O N N 330 SER H H N N 331 SER H2 H N N 332 SER HA H N N 333 SER HB2 H N N 334 SER HB3 H N N 335 SER HG H N N 336 SER HXT H N N 337 THR N N N N 338 THR CA C N S 339 THR C C N N 340 THR O O N N 341 THR CB C N R 342 THR OG1 O N N 343 THR CG2 C N N 344 THR OXT O N N 345 THR H H N N 346 THR H2 H N N 347 THR HA H N N 348 THR HB H N N 349 THR HG1 H N N 350 THR HG21 H N N 351 THR HG22 H N N 352 THR HG23 H N N 353 THR HXT H N N 354 TRP N N N N 355 TRP CA C N S 356 TRP C C N N 357 TRP O O N N 358 TRP CB C N N 359 TRP CG C Y N 360 TRP CD1 C Y N 361 TRP CD2 C Y N 362 TRP NE1 N Y N 363 TRP CE2 C Y N 364 TRP CE3 C Y N 365 TRP CZ2 C Y N 366 TRP CZ3 C Y N 367 TRP CH2 C Y N 368 TRP OXT O N N 369 TRP H H N N 370 TRP H2 H N N 371 TRP HA H N N 372 TRP HB2 H N N 373 TRP HB3 H N N 374 TRP HD1 H N N 375 TRP HE1 H N N 376 TRP HE3 H N N 377 TRP HZ2 H N N 378 TRP HZ3 H N N 379 TRP HH2 H N N 380 TRP HXT H N N 381 TYR N N N N 382 TYR CA C N S 383 TYR C C N N 384 TYR O O N N 385 TYR CB C N N 386 TYR CG C Y N 387 TYR CD1 C Y N 388 TYR CD2 C Y N 389 TYR CE1 C Y N 390 TYR CE2 C Y N 391 TYR CZ C Y N 392 TYR OH O N N 393 TYR OXT O N N 394 TYR H H N N 395 TYR H2 H N N 396 TYR HA H N N 397 TYR HB2 H N N 398 TYR HB3 H N N 399 TYR HD1 H N N 400 TYR HD2 H N N 401 TYR HE1 H N N 402 TYR HE2 H N N 403 TYR HH H N N 404 TYR HXT H N N 405 VAL N N N N 406 VAL CA C N S 407 VAL C C N N 408 VAL O O N N 409 VAL CB C N N 410 VAL CG1 C N N 411 VAL CG2 C N N 412 VAL OXT O N N 413 VAL H H N N 414 VAL H2 H N N 415 VAL HA H N N 416 VAL HB H N N 417 VAL HG11 H N N 418 VAL HG12 H N N 419 VAL HG13 H N N 420 VAL HG21 H N N 421 VAL HG22 H N N 422 VAL HG23 H N N 423 VAL HXT H N N 424 X2K CAB C N N 425 X2K CAN C Y N 426 X2K CAH C Y N 427 X2K CAL C Y N 428 X2K CAA C N N 429 X2K NAJ N Y N 430 X2K CAO C Y N 431 X2K CAE C N N 432 X2K CAQ C N N 433 X2K CAS C Y N 434 X2K CAI C Y N 435 X2K CAM C Y N 436 X2K NAC N N N 437 X2K CAF C Y N 438 X2K CAG C Y N 439 X2K CAR C Y N 440 X2K NAK N N N 441 X2K CAP C N N 442 X2K OAD O N N 443 X2K HAB1 H N N 444 X2K HAB2 H N N 445 X2K HAB3 H N N 446 X2K HAH H N N 447 X2K HAA1 H N N 448 X2K HAA2 H N N 449 X2K HAA3 H N N 450 X2K HAJ H N N 451 X2K HAE H N N 452 X2K HAI H N N 453 X2K HAC1 H N N 454 X2K HAC2 H N N 455 X2K HAF H N N 456 X2K HAG H N N 457 X2K HAK H N N 458 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 FMT C O1 doub N N 83 FMT C O2 sing N N 84 FMT C H sing N N 85 FMT O2 HO2 sing N N 86 GLN N CA sing N N 87 GLN N H sing N N 88 GLN N H2 sing N N 89 GLN CA C sing N N 90 GLN CA CB sing N N 91 GLN CA HA sing N N 92 GLN C O doub N N 93 GLN C OXT sing N N 94 GLN CB CG sing N N 95 GLN CB HB2 sing N N 96 GLN CB HB3 sing N N 97 GLN CG CD sing N N 98 GLN CG HG2 sing N N 99 GLN CG HG3 sing N N 100 GLN CD OE1 doub N N 101 GLN CD NE2 sing N N 102 GLN NE2 HE21 sing N N 103 GLN NE2 HE22 sing N N 104 GLN OXT HXT sing N N 105 GLU N CA sing N N 106 GLU N H sing N N 107 GLU N H2 sing N N 108 GLU CA C sing N N 109 GLU CA CB sing N N 110 GLU CA HA sing N N 111 GLU C O doub N N 112 GLU C OXT sing N N 113 GLU CB CG sing N N 114 GLU CB HB2 sing N N 115 GLU CB HB3 sing N N 116 GLU CG CD sing N N 117 GLU CG HG2 sing N N 118 GLU CG HG3 sing N N 119 GLU CD OE1 doub N N 120 GLU CD OE2 sing N N 121 GLU OE2 HE2 sing N N 122 GLU OXT HXT sing N N 123 GLY N CA sing N N 124 GLY N H sing N N 125 GLY N H2 sing N N 126 GLY CA C sing N N 127 GLY CA HA2 sing N N 128 GLY CA HA3 sing N N 129 GLY C O doub N N 130 GLY C OXT sing N N 131 GLY OXT HXT sing N N 132 HIS N CA sing N N 133 HIS N H sing N N 134 HIS N H2 sing N N 135 HIS CA C sing N N 136 HIS CA CB sing N N 137 HIS CA HA sing N N 138 HIS C O doub N N 139 HIS C OXT sing N N 140 HIS CB CG sing N N 141 HIS CB HB2 sing N N 142 HIS CB HB3 sing N N 143 HIS CG ND1 sing Y N 144 HIS CG CD2 doub Y N 145 HIS ND1 CE1 doub Y N 146 HIS ND1 HD1 sing N N 147 HIS CD2 NE2 sing Y N 148 HIS CD2 HD2 sing N N 149 HIS CE1 NE2 sing Y N 150 HIS CE1 HE1 sing N N 151 HIS NE2 HE2 sing N N 152 HIS OXT HXT sing N N 153 HOH O H1 sing N N 154 HOH O H2 sing N N 155 ILE N CA sing N N 156 ILE N H sing N N 157 ILE N H2 sing N N 158 ILE CA C sing N N 159 ILE CA CB sing N N 160 ILE CA HA sing N N 161 ILE C O doub N N 162 ILE C OXT sing N N 163 ILE CB CG1 sing N N 164 ILE CB CG2 sing N N 165 ILE CB HB sing N N 166 ILE CG1 CD1 sing N N 167 ILE CG1 HG12 sing N N 168 ILE CG1 HG13 sing N N 169 ILE CG2 HG21 sing N N 170 ILE CG2 HG22 sing N N 171 ILE CG2 HG23 sing N N 172 ILE CD1 HD11 sing N N 173 ILE CD1 HD12 sing N N 174 ILE CD1 HD13 sing N N 175 ILE OXT HXT sing N N 176 LEU N CA sing N N 177 LEU N H sing N N 178 LEU N H2 sing N N 179 LEU CA C sing N N 180 LEU CA CB sing N N 181 LEU CA HA sing N N 182 LEU C O doub N N 183 LEU C OXT sing N N 184 LEU CB CG sing N N 185 LEU CB HB2 sing N N 186 LEU CB HB3 sing N N 187 LEU CG CD1 sing N N 188 LEU CG CD2 sing N N 189 LEU CG HG sing N N 190 LEU CD1 HD11 sing N N 191 LEU CD1 HD12 sing N N 192 LEU CD1 HD13 sing N N 193 LEU CD2 HD21 sing N N 194 LEU CD2 HD22 sing N N 195 LEU CD2 HD23 sing N N 196 LEU OXT HXT sing N N 197 LYS N CA sing N N 198 LYS N H sing N N 199 LYS N H2 sing N N 200 LYS CA C sing N N 201 LYS CA CB sing N N 202 LYS CA HA sing N N 203 LYS C O doub N N 204 LYS C OXT sing N N 205 LYS CB CG sing N N 206 LYS CB HB2 sing N N 207 LYS CB HB3 sing N N 208 LYS CG CD sing N N 209 LYS CG HG2 sing N N 210 LYS CG HG3 sing N N 211 LYS CD CE sing N N 212 LYS CD HD2 sing N N 213 LYS CD HD3 sing N N 214 LYS CE NZ sing N N 215 LYS CE HE2 sing N N 216 LYS CE HE3 sing N N 217 LYS NZ HZ1 sing N N 218 LYS NZ HZ2 sing N N 219 LYS NZ HZ3 sing N N 220 LYS OXT HXT sing N N 221 MET N CA sing N N 222 MET N H sing N N 223 MET N H2 sing N N 224 MET CA C sing N N 225 MET CA CB sing N N 226 MET CA HA sing N N 227 MET C O doub N N 228 MET C OXT sing N N 229 MET CB CG sing N N 230 MET CB HB2 sing N N 231 MET CB HB3 sing N N 232 MET CG SD sing N N 233 MET CG HG2 sing N N 234 MET CG HG3 sing N N 235 MET SD CE sing N N 236 MET CE HE1 sing N N 237 MET CE HE2 sing N N 238 MET CE HE3 sing N N 239 MET OXT HXT sing N N 240 PHE N CA sing N N 241 PHE N H sing N N 242 PHE N H2 sing N N 243 PHE CA C sing N N 244 PHE CA CB sing N N 245 PHE CA HA sing N N 246 PHE C O doub N N 247 PHE C OXT sing N N 248 PHE CB CG sing N N 249 PHE CB HB2 sing N N 250 PHE CB HB3 sing N N 251 PHE CG CD1 doub Y N 252 PHE CG CD2 sing Y N 253 PHE CD1 CE1 sing Y N 254 PHE CD1 HD1 sing N N 255 PHE CD2 CE2 doub Y N 256 PHE CD2 HD2 sing N N 257 PHE CE1 CZ doub Y N 258 PHE CE1 HE1 sing N N 259 PHE CE2 CZ sing Y N 260 PHE CE2 HE2 sing N N 261 PHE CZ HZ sing N N 262 PHE OXT HXT sing N N 263 PRO N CA sing N N 264 PRO N CD sing N N 265 PRO N H sing N N 266 PRO CA C sing N N 267 PRO CA CB sing N N 268 PRO CA HA sing N N 269 PRO C O doub N N 270 PRO C OXT sing N N 271 PRO CB CG sing N N 272 PRO CB HB2 sing N N 273 PRO CB HB3 sing N N 274 PRO CG CD sing N N 275 PRO CG HG2 sing N N 276 PRO CG HG3 sing N N 277 PRO CD HD2 sing N N 278 PRO CD HD3 sing N N 279 PRO OXT HXT sing N N 280 PTR N CA sing N N 281 PTR N H sing N N 282 PTR N H2 sing N N 283 PTR CA C sing N N 284 PTR CA CB sing N N 285 PTR CA HA sing N N 286 PTR C O doub N N 287 PTR C OXT sing N N 288 PTR OXT HXT sing N N 289 PTR CB CG sing N N 290 PTR CB HB2 sing N N 291 PTR CB HB3 sing N N 292 PTR CG CD1 doub Y N 293 PTR CG CD2 sing Y N 294 PTR CD1 CE1 sing Y N 295 PTR CD1 HD1 sing N N 296 PTR CD2 CE2 doub Y N 297 PTR CD2 HD2 sing N N 298 PTR CE1 CZ doub Y N 299 PTR CE1 HE1 sing N N 300 PTR CE2 CZ sing Y N 301 PTR CE2 HE2 sing N N 302 PTR CZ OH sing N N 303 PTR OH P sing N N 304 PTR P O1P doub N N 305 PTR P O2P sing N N 306 PTR P O3P sing N N 307 PTR O2P HO2P sing N N 308 PTR O3P HO3P sing N N 309 SER N CA sing N N 310 SER N H sing N N 311 SER N H2 sing N N 312 SER CA C sing N N 313 SER CA CB sing N N 314 SER CA HA sing N N 315 SER C O doub N N 316 SER C OXT sing N N 317 SER CB OG sing N N 318 SER CB HB2 sing N N 319 SER CB HB3 sing N N 320 SER OG HG sing N N 321 SER OXT HXT sing N N 322 THR N CA sing N N 323 THR N H sing N N 324 THR N H2 sing N N 325 THR CA C sing N N 326 THR CA CB sing N N 327 THR CA HA sing N N 328 THR C O doub N N 329 THR C OXT sing N N 330 THR CB OG1 sing N N 331 THR CB CG2 sing N N 332 THR CB HB sing N N 333 THR OG1 HG1 sing N N 334 THR CG2 HG21 sing N N 335 THR CG2 HG22 sing N N 336 THR CG2 HG23 sing N N 337 THR OXT HXT sing N N 338 TRP N CA sing N N 339 TRP N H sing N N 340 TRP N H2 sing N N 341 TRP CA C sing N N 342 TRP CA CB sing N N 343 TRP CA HA sing N N 344 TRP C O doub N N 345 TRP C OXT sing N N 346 TRP CB CG sing N N 347 TRP CB HB2 sing N N 348 TRP CB HB3 sing N N 349 TRP CG CD1 doub Y N 350 TRP CG CD2 sing Y N 351 TRP CD1 NE1 sing Y N 352 TRP CD1 HD1 sing N N 353 TRP CD2 CE2 doub Y N 354 TRP CD2 CE3 sing Y N 355 TRP NE1 CE2 sing Y N 356 TRP NE1 HE1 sing N N 357 TRP CE2 CZ2 sing Y N 358 TRP CE3 CZ3 doub Y N 359 TRP CE3 HE3 sing N N 360 TRP CZ2 CH2 doub Y N 361 TRP CZ2 HZ2 sing N N 362 TRP CZ3 CH2 sing Y N 363 TRP CZ3 HZ3 sing N N 364 TRP CH2 HH2 sing N N 365 TRP OXT HXT sing N N 366 TYR N CA sing N N 367 TYR N H sing N N 368 TYR N H2 sing N N 369 TYR CA C sing N N 370 TYR CA CB sing N N 371 TYR CA HA sing N N 372 TYR C O doub N N 373 TYR C OXT sing N N 374 TYR CB CG sing N N 375 TYR CB HB2 sing N N 376 TYR CB HB3 sing N N 377 TYR CG CD1 doub Y N 378 TYR CG CD2 sing Y N 379 TYR CD1 CE1 sing Y N 380 TYR CD1 HD1 sing N N 381 TYR CD2 CE2 doub Y N 382 TYR CD2 HD2 sing N N 383 TYR CE1 CZ doub Y N 384 TYR CE1 HE1 sing N N 385 TYR CE2 CZ sing Y N 386 TYR CE2 HE2 sing N N 387 TYR CZ OH sing N N 388 TYR OH HH sing N N 389 TYR OXT HXT sing N N 390 VAL N CA sing N N 391 VAL N H sing N N 392 VAL N H2 sing N N 393 VAL CA C sing N N 394 VAL CA CB sing N N 395 VAL CA HA sing N N 396 VAL C O doub N N 397 VAL C OXT sing N N 398 VAL CB CG1 sing N N 399 VAL CB CG2 sing N N 400 VAL CB HB sing N N 401 VAL CG1 HG11 sing N N 402 VAL CG1 HG12 sing N N 403 VAL CG1 HG13 sing N N 404 VAL CG2 HG21 sing N N 405 VAL CG2 HG22 sing N N 406 VAL CG2 HG23 sing N N 407 VAL OXT HXT sing N N 408 X2K CAB CAN sing N N 409 X2K CAN CAH sing Y N 410 X2K CAN CAO doub Y N 411 X2K CAH CAL doub Y N 412 X2K CAL CAA sing N N 413 X2K CAL NAJ sing Y N 414 X2K NAJ CAO sing Y N 415 X2K CAO CAE sing N N 416 X2K CAE CAQ doub N N 417 X2K CAQ CAS sing N N 418 X2K CAQ CAP sing N N 419 X2K CAS CAI sing Y N 420 X2K CAS CAR doub Y N 421 X2K CAI CAM doub Y N 422 X2K CAM NAC sing N N 423 X2K CAM CAF sing Y N 424 X2K CAF CAG doub Y Z 425 X2K CAG CAR sing Y N 426 X2K CAR NAK sing N N 427 X2K NAK CAP sing N N 428 X2K CAP OAD doub N N 429 X2K CAB HAB1 sing N N 430 X2K CAB HAB2 sing N N 431 X2K CAB HAB3 sing N N 432 X2K CAH HAH sing N N 433 X2K CAA HAA1 sing N N 434 X2K CAA HAA2 sing N N 435 X2K CAA HAA3 sing N N 436 X2K NAJ HAJ sing N N 437 X2K CAE HAE sing N N 438 X2K CAI HAI sing N N 439 X2K NAC HAC1 sing N N 440 X2K NAC HAC2 sing N N 441 X2K CAF HAF sing N N 442 X2K CAG HAG sing N N 443 X2K NAK HAK sing N N 444 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'FORMIC ACID' FMT 3 '(3Z)-5-amino-3-[(3,5-dimethyl-1H-pyrrol-2-yl)methylidene]-1,3-dihydro-2H-indol-2-one' X2K 4 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 2IVT _pdbx_initial_refinement_model.details 'PDB ENTRY 2IVT, FLEXIBLE LOOPS REMOVED' #