HEADER RNA BINDING PROTEIN 17-MAY-10 2XEQ TITLE HUMAN PATL1 C-TERMINAL DOMAIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: PAT1 HOMOLOG 1,; COMPND 3 CHAIN: A, B, C, D; COMPND 4 FRAGMENT: C-TERMINAL DOMAIN, RESIDUES 517-767; COMPND 5 SYNONYM: PAT1-LIKE PROTEIN 1, PATL1; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 CELL_LINE: HELA; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 83333; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: K-12; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: MODIFIED PRSFDUET-1 KEYWDS MRNA DECAPPING, P-BODIES, RNA BINDING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR F.TRITSCHLER,O.WEICHENRIEDER REVDAT 4 20-DEC-23 2XEQ 1 LINK REVDAT 3 18-MAY-11 2XEQ 1 JRNL REMARK REVDAT 2 23-JUN-10 2XEQ 1 JRNL REVDAT 1 16-JUN-10 2XEQ 0 JRNL AUTH J.E.BRAUN,F.TRITSCHLER,G.HAAS,C.IGREJA,V.TRUFFAULT, JRNL AUTH 2 O.WEICHENRIEDER,E.IZAURRALDE JRNL TITL THE C-TERMINAL ALPHA-ALPHA SUPERHELIX OF PAT IS REQUIRED FOR JRNL TITL 2 MRNA DECAPPING IN METAZOA. JRNL REF EMBO J. V. 29 2368 2010 JRNL REFN ISSN 0261-4189 JRNL PMID 20543818 JRNL DOI 10.1038/EMBOJ.2010.124 REMARK 2 REMARK 2 RESOLUTION. 3.10 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.10 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 43.92 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.210 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.2 REMARK 3 NUMBER OF REFLECTIONS : 41653 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.249 REMARK 3 R VALUE (WORKING SET) : 0.248 REMARK 3 FREE R VALUE : 0.282 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 2122 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 43.9233 - 6.6720 0.97 3939 183 0.2002 0.2304 REMARK 3 2 6.6720 - 5.2987 0.98 3975 173 0.2369 0.2668 REMARK 3 3 5.2987 - 4.6297 0.98 3958 193 0.2048 0.2264 REMARK 3 4 4.6297 - 4.2068 0.98 3946 228 0.2210 0.2453 REMARK 3 5 4.2068 - 3.9055 0.98 3947 223 0.2361 0.2682 REMARK 3 6 3.9055 - 3.6753 0.98 3978 194 0.2597 0.3477 REMARK 3 7 3.6753 - 3.4913 0.98 3935 221 0.2821 0.2886 REMARK 3 8 3.4913 - 3.3394 0.98 3938 229 0.3163 0.3266 REMARK 3 9 3.3394 - 3.2109 0.99 3953 233 0.3406 0.3634 REMARK 3 10 3.2109 - 3.1001 0.99 3962 245 0.3597 0.3612 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : 0.31 REMARK 3 B_SOL : 44.79 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.470 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 28.040 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 70.18 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 78.00 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -11.63490 REMARK 3 B22 (A**2) : 21.15830 REMARK 3 B33 (A**2) : -9.52340 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.005 7802 REMARK 3 ANGLE : 0.680 10538 REMARK 3 CHIRALITY : 0.042 1257 REMARK 3 PLANARITY : 0.007 1327 REMARK 3 DIHEDRAL : 12.704 3043 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: RESIDUES 512-514 AND 573-576 AND 704 REMARK 3 -711 AND 766-767 OF CHAIN A ARE DISORDERED. RESIDUES 512-514 AND REMARK 3 573-577 AND 703-710 AND 766-767 OF CHAIN B ARE DISORDERED. REMARK 3 RESIDUES 512-514 AND 574-577 AND 704-711 AND 766-767 OF CHAIN C REMARK 3 ARE DISORDERED. RESIDUES 512-515 AND 663-670 AND 704-710 AND 766- REMARK 3 767 OF CHAIN D ARE DISORDERED. REMARK 4 REMARK 4 2XEQ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 17-MAY-10. REMARK 100 THE DEPOSITION ID IS D_1290043946. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 08-DEC-08 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.8 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X10SA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9794 REMARK 200 MONOCHROMATOR : SI(111) REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 22432 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.100 REMARK 200 RESOLUTION RANGE LOW (A) : 43.900 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 200 DATA REDUNDANCY : 4.700 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.13000 REMARK 200 FOR THE DATA SET : 9.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.10 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.18 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9 REMARK 200 DATA REDUNDANCY IN SHELL : 4.80 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.88000 REMARK 200 FOR SHELL : 1.900 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 2XES REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 52.40 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.58 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M BIS-TRIS-PROPANE, PH 7.8, 10% REMARK 280 PEG3350, 0.2 M NA3-CITRATE REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 51.08000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 54.41000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 54.28500 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 54.41000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 51.08000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 54.28500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3, 4 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 4 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 512 REMARK 465 PRO A 513 REMARK 465 GLN A 514 REMARK 465 LEU A 573 REMARK 465 PRO A 574 REMARK 465 GLY A 575 REMARK 465 GLN A 576 REMARK 465 PRO A 704 REMARK 465 ALA A 705 REMARK 465 THR A 706 REMARK 465 GLU A 707 REMARK 465 SER A 708 REMARK 465 THR A 709 REMARK 465 GLN A 710 REMARK 465 ASN A 711 REMARK 465 VAL A 766 REMARK 465 GLN A 767 REMARK 465 GLY B 512 REMARK 465 PRO B 513 REMARK 465 GLN B 514 REMARK 465 LEU B 573 REMARK 465 PRO B 574 REMARK 465 GLY B 575 REMARK 465 GLN B 576 REMARK 465 GLU B 577 REMARK 465 ASP B 703 REMARK 465 PRO B 704 REMARK 465 ALA B 705 REMARK 465 THR B 706 REMARK 465 GLU B 707 REMARK 465 SER B 708 REMARK 465 THR B 709 REMARK 465 GLN B 710 REMARK 465 VAL B 766 REMARK 465 GLN B 767 REMARK 465 GLY C 512 REMARK 465 PRO C 513 REMARK 465 GLN C 514 REMARK 465 PRO C 574 REMARK 465 GLY C 575 REMARK 465 GLN C 576 REMARK 465 GLU C 577 REMARK 465 ALA C 705 REMARK 465 THR C 706 REMARK 465 GLU C 707 REMARK 465 SER C 708 REMARK 465 THR C 709 REMARK 465 GLN C 710 REMARK 465 VAL C 766 REMARK 465 GLN C 767 REMARK 465 GLY D 512 REMARK 465 PRO D 513 REMARK 465 GLN D 514 REMARK 465 ASP D 515 REMARK 465 PRO D 663 REMARK 465 GLN D 664 REMARK 465 SER D 665 REMARK 465 ALA D 666 REMARK 465 ALA D 667 REMARK 465 THR D 668 REMARK 465 PRO D 669 REMARK 465 ALA D 670 REMARK 465 PRO D 704 REMARK 465 ALA D 705 REMARK 465 THR D 706 REMARK 465 GLU D 707 REMARK 465 SER D 708 REMARK 465 THR D 709 REMARK 465 GLN D 710 REMARK 465 VAL D 766 REMARK 465 GLN D 767 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OE1 GLN C 681 O ALA C 732 2.07 REMARK 500 O TYR A 543 NH1 ARG A 551 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 PRO C 704 C - N - CD ANGL. DEV. = -17.0 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 542 2.32 -65.82 REMARK 500 GLU A 631 64.19 61.47 REMARK 500 ARG A 727 -61.73 -131.99 REMARK 500 PRO A 729 151.42 -49.60 REMARK 500 GLU B 548 -64.15 -95.76 REMARK 500 LEU B 671 -164.68 -111.68 REMARK 500 GLN B 764 65.21 68.59 REMARK 500 GLU C 548 -58.44 70.36 REMARK 500 ALA C 598 1.32 -67.69 REMARK 500 GLU C 631 77.69 49.76 REMARK 500 ASN C 661 58.38 37.79 REMARK 500 ALA C 666 -7.01 64.27 REMARK 500 ALA C 670 13.42 85.80 REMARK 500 LYS C 683 -70.07 -57.69 REMARK 500 SER C 702 108.91 -49.26 REMARK 500 GLU D 548 -59.90 70.74 REMARK 500 LYS D 626 1.29 -69.31 REMARK 500 GLU D 631 65.58 63.69 REMARK 500 ALA D 731 13.00 -66.97 REMARK 500 ALA D 732 -53.77 -126.47 REMARK 500 ALA D 734 -167.34 -77.52 REMARK 500 TYR D 750 -25.04 -140.42 REMARK 500 ASP D 752 -167.85 -71.14 REMARK 500 REMARK 500 REMARK: NULL REMARK 650 REMARK 650 HELIX REMARK 650 DETERMINATION METHOD: AUTHOR PROVIDED. REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2XER RELATED DB: PDB REMARK 900 HUMAN PATL1 C-TERMINAL DOMAIN (LOOP VARIANT WITH SULFATES) REMARK 900 RELATED ID: 2XES RELATED DB: PDB REMARK 900 HUMAN PATL1 C-TERMINAL DOMAIN (LOOP VARIANT) REMARK 999 REMARK 999 SEQUENCE REMARK 999 THE FIRST 5 AMINO ACIDS GPQDP RESULT FROM THE 5' CLONING REMARK 999 SITE. DBREF 2XEQ A 517 767 UNP Q86TB9 PATL1_HUMAN 517 767 DBREF 2XEQ B 517 767 UNP Q86TB9 PATL1_HUMAN 517 767 DBREF 2XEQ C 517 767 UNP Q86TB9 PATL1_HUMAN 517 767 DBREF 2XEQ D 517 767 UNP Q86TB9 PATL1_HUMAN 517 767 SEQADV 2XEQ GLY A 512 UNP Q86TB9 EXPRESSION TAG SEQADV 2XEQ PRO A 513 UNP Q86TB9 EXPRESSION TAG SEQADV 2XEQ GLN A 514 UNP Q86TB9 EXPRESSION TAG SEQADV 2XEQ ASP A 515 UNP Q86TB9 EXPRESSION TAG SEQADV 2XEQ PRO A 516 UNP Q86TB9 EXPRESSION TAG SEQADV 2XEQ GLY B 512 UNP Q86TB9 EXPRESSION TAG SEQADV 2XEQ PRO B 513 UNP Q86TB9 EXPRESSION TAG SEQADV 2XEQ GLN B 514 UNP Q86TB9 EXPRESSION TAG SEQADV 2XEQ ASP B 515 UNP Q86TB9 EXPRESSION TAG SEQADV 2XEQ PRO B 516 UNP Q86TB9 EXPRESSION TAG SEQADV 2XEQ GLY C 512 UNP Q86TB9 EXPRESSION TAG SEQADV 2XEQ PRO C 513 UNP Q86TB9 EXPRESSION TAG SEQADV 2XEQ GLN C 514 UNP Q86TB9 EXPRESSION TAG SEQADV 2XEQ ASP C 515 UNP Q86TB9 EXPRESSION TAG SEQADV 2XEQ PRO C 516 UNP Q86TB9 EXPRESSION TAG SEQADV 2XEQ GLY D 512 UNP Q86TB9 EXPRESSION TAG SEQADV 2XEQ PRO D 513 UNP Q86TB9 EXPRESSION TAG SEQADV 2XEQ GLN D 514 UNP Q86TB9 EXPRESSION TAG SEQADV 2XEQ ASP D 515 UNP Q86TB9 EXPRESSION TAG SEQADV 2XEQ PRO D 516 UNP Q86TB9 EXPRESSION TAG SEQRES 1 A 256 GLY PRO GLN ASP PRO ASP LYS ARG ARG LYS THR LEU VAL SEQRES 2 A 256 ILE ILE GLU LYS THR TYR SER LEU LEU LEU ASP VAL GLU SEQRES 3 A 256 ASP TYR GLU ARG ARG TYR LEU LEU SER LEU GLU GLU GLU SEQRES 4 A 256 ARG PRO ALA LEU MSE ASP ASP ARG LYS HIS LYS ILE CYS SEQRES 5 A 256 SER MSE TYR ASP ASN LEU ARG GLY LYS LEU PRO GLY GLN SEQRES 6 A 256 GLU ARG PRO SER ASP ASP HIS PHE VAL GLN ILE MSE CYS SEQRES 7 A 256 ILE ARG LYS GLY LYS ARG MSE VAL ALA ARG ILE LEU PRO SEQRES 8 A 256 PHE LEU SER THR GLU GLN ALA ALA ASP ILE LEU MSE THR SEQRES 9 A 256 THR ALA ARG ASN LEU PRO PHE LEU ILE LYS LYS ASP ALA SEQRES 10 A 256 GLN ASP GLU VAL LEU PRO CYS LEU LEU SER PRO PHE SER SEQRES 11 A 256 LEU LEU LEU TYR HIS LEU PRO SER VAL SER ILE THR SER SEQRES 12 A 256 LEU LEU ARG GLN LEU MSE ASN LEU PRO GLN SER ALA ALA SEQRES 13 A 256 THR PRO ALA LEU SER ASN PRO HIS LEU THR ALA VAL LEU SEQRES 14 A 256 GLN ASN LYS PHE GLY LEU SER LEU LEU LEU ILE LEU LEU SEQRES 15 A 256 SER ARG GLY GLU ASP LEU GLN SER SER ASP PRO ALA THR SEQRES 16 A 256 GLU SER THR GLN ASN ASN GLN TRP THR GLU VAL MSE PHE SEQRES 17 A 256 MSE ALA THR ARG GLU LEU LEU ARG ILE PRO GLN ALA ALA SEQRES 18 A 256 LEU ALA LYS PRO ILE SER ILE PRO THR ASN LEU VAL SER SEQRES 19 A 256 LEU PHE SER ARG TYR VAL ASP ARG GLN LYS LEU ASN LEU SEQRES 20 A 256 LEU GLU THR LYS LEU GLN LEU VAL GLN SEQRES 1 B 256 GLY PRO GLN ASP PRO ASP LYS ARG ARG LYS THR LEU VAL SEQRES 2 B 256 ILE ILE GLU LYS THR TYR SER LEU LEU LEU ASP VAL GLU SEQRES 3 B 256 ASP TYR GLU ARG ARG TYR LEU LEU SER LEU GLU GLU GLU SEQRES 4 B 256 ARG PRO ALA LEU MSE ASP ASP ARG LYS HIS LYS ILE CYS SEQRES 5 B 256 SER MSE TYR ASP ASN LEU ARG GLY LYS LEU PRO GLY GLN SEQRES 6 B 256 GLU ARG PRO SER ASP ASP HIS PHE VAL GLN ILE MSE CYS SEQRES 7 B 256 ILE ARG LYS GLY LYS ARG MSE VAL ALA ARG ILE LEU PRO SEQRES 8 B 256 PHE LEU SER THR GLU GLN ALA ALA ASP ILE LEU MSE THR SEQRES 9 B 256 THR ALA ARG ASN LEU PRO PHE LEU ILE LYS LYS ASP ALA SEQRES 10 B 256 GLN ASP GLU VAL LEU PRO CYS LEU LEU SER PRO PHE SER SEQRES 11 B 256 LEU LEU LEU TYR HIS LEU PRO SER VAL SER ILE THR SER SEQRES 12 B 256 LEU LEU ARG GLN LEU MSE ASN LEU PRO GLN SER ALA ALA SEQRES 13 B 256 THR PRO ALA LEU SER ASN PRO HIS LEU THR ALA VAL LEU SEQRES 14 B 256 GLN ASN LYS PHE GLY LEU SER LEU LEU LEU ILE LEU LEU SEQRES 15 B 256 SER ARG GLY GLU ASP LEU GLN SER SER ASP PRO ALA THR SEQRES 16 B 256 GLU SER THR GLN ASN ASN GLN TRP THR GLU VAL MSE PHE SEQRES 17 B 256 MSE ALA THR ARG GLU LEU LEU ARG ILE PRO GLN ALA ALA SEQRES 18 B 256 LEU ALA LYS PRO ILE SER ILE PRO THR ASN LEU VAL SER SEQRES 19 B 256 LEU PHE SER ARG TYR VAL ASP ARG GLN LYS LEU ASN LEU SEQRES 20 B 256 LEU GLU THR LYS LEU GLN LEU VAL GLN SEQRES 1 C 256 GLY PRO GLN ASP PRO ASP LYS ARG ARG LYS THR LEU VAL SEQRES 2 C 256 ILE ILE GLU LYS THR TYR SER LEU LEU LEU ASP VAL GLU SEQRES 3 C 256 ASP TYR GLU ARG ARG TYR LEU LEU SER LEU GLU GLU GLU SEQRES 4 C 256 ARG PRO ALA LEU MSE ASP ASP ARG LYS HIS LYS ILE CYS SEQRES 5 C 256 SER MSE TYR ASP ASN LEU ARG GLY LYS LEU PRO GLY GLN SEQRES 6 C 256 GLU ARG PRO SER ASP ASP HIS PHE VAL GLN ILE MSE CYS SEQRES 7 C 256 ILE ARG LYS GLY LYS ARG MSE VAL ALA ARG ILE LEU PRO SEQRES 8 C 256 PHE LEU SER THR GLU GLN ALA ALA ASP ILE LEU MSE THR SEQRES 9 C 256 THR ALA ARG ASN LEU PRO PHE LEU ILE LYS LYS ASP ALA SEQRES 10 C 256 GLN ASP GLU VAL LEU PRO CYS LEU LEU SER PRO PHE SER SEQRES 11 C 256 LEU LEU LEU TYR HIS LEU PRO SER VAL SER ILE THR SER SEQRES 12 C 256 LEU LEU ARG GLN LEU MSE ASN LEU PRO GLN SER ALA ALA SEQRES 13 C 256 THR PRO ALA LEU SER ASN PRO HIS LEU THR ALA VAL LEU SEQRES 14 C 256 GLN ASN LYS PHE GLY LEU SER LEU LEU LEU ILE LEU LEU SEQRES 15 C 256 SER ARG GLY GLU ASP LEU GLN SER SER ASP PRO ALA THR SEQRES 16 C 256 GLU SER THR GLN ASN ASN GLN TRP THR GLU VAL MSE PHE SEQRES 17 C 256 MSE ALA THR ARG GLU LEU LEU ARG ILE PRO GLN ALA ALA SEQRES 18 C 256 LEU ALA LYS PRO ILE SER ILE PRO THR ASN LEU VAL SER SEQRES 19 C 256 LEU PHE SER ARG TYR VAL ASP ARG GLN LYS LEU ASN LEU SEQRES 20 C 256 LEU GLU THR LYS LEU GLN LEU VAL GLN SEQRES 1 D 256 GLY PRO GLN ASP PRO ASP LYS ARG ARG LYS THR LEU VAL SEQRES 2 D 256 ILE ILE GLU LYS THR TYR SER LEU LEU LEU ASP VAL GLU SEQRES 3 D 256 ASP TYR GLU ARG ARG TYR LEU LEU SER LEU GLU GLU GLU SEQRES 4 D 256 ARG PRO ALA LEU MSE ASP ASP ARG LYS HIS LYS ILE CYS SEQRES 5 D 256 SER MSE TYR ASP ASN LEU ARG GLY LYS LEU PRO GLY GLN SEQRES 6 D 256 GLU ARG PRO SER ASP ASP HIS PHE VAL GLN ILE MSE CYS SEQRES 7 D 256 ILE ARG LYS GLY LYS ARG MSE VAL ALA ARG ILE LEU PRO SEQRES 8 D 256 PHE LEU SER THR GLU GLN ALA ALA ASP ILE LEU MSE THR SEQRES 9 D 256 THR ALA ARG ASN LEU PRO PHE LEU ILE LYS LYS ASP ALA SEQRES 10 D 256 GLN ASP GLU VAL LEU PRO CYS LEU LEU SER PRO PHE SER SEQRES 11 D 256 LEU LEU LEU TYR HIS LEU PRO SER VAL SER ILE THR SER SEQRES 12 D 256 LEU LEU ARG GLN LEU MSE ASN LEU PRO GLN SER ALA ALA SEQRES 13 D 256 THR PRO ALA LEU SER ASN PRO HIS LEU THR ALA VAL LEU SEQRES 14 D 256 GLN ASN LYS PHE GLY LEU SER LEU LEU LEU ILE LEU LEU SEQRES 15 D 256 SER ARG GLY GLU ASP LEU GLN SER SER ASP PRO ALA THR SEQRES 16 D 256 GLU SER THR GLN ASN ASN GLN TRP THR GLU VAL MSE PHE SEQRES 17 D 256 MSE ALA THR ARG GLU LEU LEU ARG ILE PRO GLN ALA ALA SEQRES 18 D 256 LEU ALA LYS PRO ILE SER ILE PRO THR ASN LEU VAL SER SEQRES 19 D 256 LEU PHE SER ARG TYR VAL ASP ARG GLN LYS LEU ASN LEU SEQRES 20 D 256 LEU GLU THR LYS LEU GLN LEU VAL GLN MODRES 2XEQ MSE A 555 MET SELENOMETHIONINE MODRES 2XEQ MSE A 565 MET SELENOMETHIONINE MODRES 2XEQ MSE A 588 MET SELENOMETHIONINE MODRES 2XEQ MSE A 596 MET SELENOMETHIONINE MODRES 2XEQ MSE A 614 MET SELENOMETHIONINE MODRES 2XEQ MSE A 660 MET SELENOMETHIONINE MODRES 2XEQ MSE A 718 MET SELENOMETHIONINE MODRES 2XEQ MSE A 720 MET SELENOMETHIONINE MODRES 2XEQ MSE B 555 MET SELENOMETHIONINE MODRES 2XEQ MSE B 565 MET SELENOMETHIONINE MODRES 2XEQ MSE B 588 MET SELENOMETHIONINE MODRES 2XEQ MSE B 596 MET SELENOMETHIONINE MODRES 2XEQ MSE B 614 MET SELENOMETHIONINE MODRES 2XEQ MSE B 660 MET SELENOMETHIONINE MODRES 2XEQ MSE B 718 MET SELENOMETHIONINE MODRES 2XEQ MSE B 720 MET SELENOMETHIONINE MODRES 2XEQ MSE C 555 MET SELENOMETHIONINE MODRES 2XEQ MSE C 565 MET SELENOMETHIONINE MODRES 2XEQ MSE C 588 MET SELENOMETHIONINE MODRES 2XEQ MSE C 596 MET SELENOMETHIONINE MODRES 2XEQ MSE C 614 MET SELENOMETHIONINE MODRES 2XEQ MSE C 660 MET SELENOMETHIONINE MODRES 2XEQ MSE C 718 MET SELENOMETHIONINE MODRES 2XEQ MSE C 720 MET SELENOMETHIONINE MODRES 2XEQ MSE D 555 MET SELENOMETHIONINE MODRES 2XEQ MSE D 565 MET SELENOMETHIONINE MODRES 2XEQ MSE D 588 MET SELENOMETHIONINE MODRES 2XEQ MSE D 596 MET SELENOMETHIONINE MODRES 2XEQ MSE D 614 MET SELENOMETHIONINE MODRES 2XEQ MSE D 660 MET SELENOMETHIONINE MODRES 2XEQ MSE D 718 MET SELENOMETHIONINE MODRES 2XEQ MSE D 720 MET SELENOMETHIONINE HET MSE A 555 8 HET MSE A 565 8 HET MSE A 588 8 HET MSE A 596 8 HET MSE A 614 8 HET MSE A 660 8 HET MSE A 718 8 HET MSE A 720 8 HET MSE B 555 8 HET MSE B 565 8 HET MSE B 588 8 HET MSE B 596 8 HET MSE B 614 8 HET MSE B 660 8 HET MSE B 718 8 HET MSE B 720 8 HET MSE C 555 8 HET MSE C 565 8 HET MSE C 588 8 HET MSE C 596 8 HET MSE C 614 8 HET MSE C 660 8 HET MSE C 718 8 HET MSE C 720 8 HET MSE D 555 8 HET MSE D 565 8 HET MSE D 588 8 HET MSE D 596 8 HET MSE D 614 8 HET MSE D 660 8 HET MSE D 718 8 HET MSE D 720 8 HETNAM MSE SELENOMETHIONINE FORMUL 1 MSE 32(C5 H11 N O2 SE) FORMUL 5 HOH *8(H2 O) HELIX 1 1 PRO A 516 VAL A 536 1 21 HELIX 2 2 TYR A 539 ARG A 542 1 4 HELIX 3 3 GLU A 550 ARG A 570 1 21 HELIX 4 4 HIS A 583 ILE A 587 1 5 HELIX 5 5 ARG A 591 ILE A 600 1 10 HELIX 6 6 THR A 606 ARG A 618 1 13 HELIX 7 7 LEU A 620 ASP A 627 1 8 HELIX 8 8 LEU A 637 LEU A 643 1 7 HELIX 9 9 SER A 649 LEU A 659 1 11 HELIX 10 10 PRO A 674 LEU A 680 1 7 HELIX 11 11 LYS A 683 SER A 701 1 19 HELIX 12 12 TRP A 714 LEU A 725 1 12 HELIX 13 13 LEU A 743 PHE A 747 1 5 HELIX 14 14 ARG A 753 LYS A 762 1 10 HELIX 15 15 LYS B 518 VAL B 536 1 19 HELIX 16 16 TYR B 539 GLU B 548 1 10 HELIX 17 17 ARG B 551 LEU B 569 1 19 HELIX 18 18 ASP B 581 ILE B 587 1 7 HELIX 19 19 ARG B 591 ILE B 600 1 10 HELIX 20 20 THR B 606 ARG B 618 1 13 HELIX 21 21 LEU B 620 LYS B 626 1 7 HELIX 22 22 LEU B 637 LEU B 643 1 7 HELIX 23 23 SER B 649 LEU B 659 1 11 HELIX 24 24 PRO B 674 LEU B 680 1 7 HELIX 25 25 LYS B 683 SER B 701 1 19 HELIX 26 26 ASN B 712 ARG B 727 1 16 HELIX 27 27 LEU B 743 TYR B 750 1 8 HELIX 28 28 ARG B 753 LEU B 763 1 11 HELIX 29 29 PRO C 516 VAL C 536 1 21 HELIX 30 30 TYR C 539 LEU C 545 1 7 HELIX 31 31 ARG C 551 ARG C 570 1 20 HELIX 32 32 ASP C 582 ILE C 587 1 6 HELIX 33 33 ARG C 591 ILE C 600 1 10 HELIX 34 34 THR C 606 ARG C 618 1 13 HELIX 35 35 LEU C 620 LYS C 625 1 6 HELIX 36 36 LEU C 637 LEU C 643 1 7 HELIX 37 37 SER C 649 LEU C 659 1 11 HELIX 38 38 PRO C 674 GLN C 681 1 8 HELIX 39 39 LYS C 683 SER C 701 1 19 HELIX 40 40 ASN C 712 ARG C 727 1 16 HELIX 41 41 LEU C 743 SER C 748 1 6 HELIX 42 42 ARG C 753 LEU C 763 1 11 HELIX 43 43 ASP D 517 VAL D 536 1 20 HELIX 44 44 TYR D 539 TYR D 543 1 5 HELIX 45 45 ARG D 551 LEU D 569 1 19 HELIX 46 46 ASP D 582 ILE D 587 1 6 HELIX 47 47 ARG D 591 ALA D 598 1 8 HELIX 48 48 THR D 606 ARG D 618 1 13 HELIX 49 49 LEU D 620 LYS D 625 1 6 HELIX 50 50 LEU D 637 LEU D 643 1 7 HELIX 51 51 SER D 649 MSE D 660 1 12 HELIX 52 52 PRO D 674 LEU D 680 1 7 HELIX 53 53 LYS D 683 SER D 702 1 20 HELIX 54 54 TRP D 714 ARG D 727 1 14 HELIX 55 55 VAL D 744 PHE D 747 1 4 HELIX 56 56 ARG D 753 LEU D 763 1 11 LINK C LEU A 554 N MSE A 555 1555 1555 1.33 LINK C MSE A 555 N ASP A 556 1555 1555 1.33 LINK C SER A 564 N MSE A 565 1555 1555 1.33 LINK C MSE A 565 N TYR A 566 1555 1555 1.33 LINK C ILE A 587 N MSE A 588 1555 1555 1.33 LINK C MSE A 588 N CYS A 589 1555 1555 1.33 LINK C ARG A 595 N MSE A 596 1555 1555 1.33 LINK C MSE A 596 N VAL A 597 1555 1555 1.33 LINK C LEU A 613 N MSE A 614 1555 1555 1.33 LINK C MSE A 614 N THR A 615 1555 1555 1.33 LINK C LEU A 659 N MSE A 660 1555 1555 1.33 LINK C MSE A 660 N ASN A 661 1555 1555 1.33 LINK C VAL A 717 N MSE A 718 1555 1555 1.33 LINK C MSE A 718 N PHE A 719 1555 1555 1.33 LINK C PHE A 719 N MSE A 720 1555 1555 1.33 LINK C MSE A 720 N ALA A 721 1555 1555 1.33 LINK C LEU B 554 N MSE B 555 1555 1555 1.33 LINK C MSE B 555 N ASP B 556 1555 1555 1.32 LINK C SER B 564 N MSE B 565 1555 1555 1.33 LINK C MSE B 565 N TYR B 566 1555 1555 1.33 LINK C ILE B 587 N MSE B 588 1555 1555 1.33 LINK C MSE B 588 N CYS B 589 1555 1555 1.33 LINK C ARG B 595 N MSE B 596 1555 1555 1.33 LINK C MSE B 596 N VAL B 597 1555 1555 1.33 LINK C LEU B 613 N MSE B 614 1555 1555 1.33 LINK C MSE B 614 N THR B 615 1555 1555 1.33 LINK C LEU B 659 N MSE B 660 1555 1555 1.31 LINK C MSE B 660 N ASN B 661 1555 1555 1.31 LINK C VAL B 717 N MSE B 718 1555 1555 1.33 LINK C MSE B 718 N PHE B 719 1555 1555 1.33 LINK C PHE B 719 N MSE B 720 1555 1555 1.33 LINK C MSE B 720 N ALA B 721 1555 1555 1.33 LINK C LEU C 554 N MSE C 555 1555 1555 1.33 LINK C MSE C 555 N ASP C 556 1555 1555 1.33 LINK C SER C 564 N MSE C 565 1555 1555 1.33 LINK C MSE C 565 N TYR C 566 1555 1555 1.33 LINK C ILE C 587 N MSE C 588 1555 1555 1.33 LINK C MSE C 588 N CYS C 589 1555 1555 1.33 LINK C ARG C 595 N MSE C 596 1555 1555 1.33 LINK C MSE C 596 N VAL C 597 1555 1555 1.33 LINK C LEU C 613 N MSE C 614 1555 1555 1.33 LINK C MSE C 614 N THR C 615 1555 1555 1.33 LINK C LEU C 659 N MSE C 660 1555 1555 1.33 LINK C MSE C 660 N ASN C 661 1555 1555 1.33 LINK C VAL C 717 N MSE C 718 1555 1555 1.33 LINK C MSE C 718 N PHE C 719 1555 1555 1.33 LINK C PHE C 719 N MSE C 720 1555 1555 1.31 LINK C MSE C 720 N ALA C 721 1555 1555 1.35 LINK C LEU D 554 N MSE D 555 1555 1555 1.33 LINK C MSE D 555 N ASP D 556 1555 1555 1.33 LINK C SER D 564 N MSE D 565 1555 1555 1.33 LINK C MSE D 565 N TYR D 566 1555 1555 1.33 LINK C ILE D 587 N MSE D 588 1555 1555 1.33 LINK C MSE D 588 N CYS D 589 1555 1555 1.33 LINK C ARG D 595 N MSE D 596 1555 1555 1.33 LINK C MSE D 596 N VAL D 597 1555 1555 1.33 LINK C LEU D 613 N MSE D 614 1555 1555 1.33 LINK C MSE D 614 N THR D 615 1555 1555 1.33 LINK C LEU D 659 N MSE D 660 1555 1555 1.33 LINK C MSE D 660 N ASN D 661 1555 1555 1.33 LINK C VAL D 717 N MSE D 718 1555 1555 1.33 LINK C MSE D 718 N PHE D 719 1555 1555 1.33 LINK C PHE D 719 N MSE D 720 1555 1555 1.33 LINK C MSE D 720 N ALA D 721 1555 1555 1.33 CRYST1 102.160 108.570 108.820 90.00 90.00 90.00 P 21 21 21 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009789 0.000000 0.000000 0.00000 SCALE2 0.000000 0.009211 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009189 0.00000