data_2XG3 # _entry.id 2XG3 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.329 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 2XG3 PDBE EBI-44116 WWPDB D_1290044116 # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.content_type _pdbx_database_related.details PDB 1A3K unspecified 'X-RAY CRYSTAL STRUCTURE OF THE HUMAN GALECTIN-3 CARBOHYDRATE RECOGNITION DOMAIN (CRD) AT 2.1 ANGSTROM RESOLUTION' PDB 1KJR unspecified ;CRYSTAL STRUCTURE OF THE HUMAN GALECTIN-3 CRD IN COMPLEXWITH A 3'-DERIVATIVE OF N- ACETYLLACTOSAMINE ; PDB 1KJL unspecified 'HIGH RESOLUTION X-RAY STRUCTURE OF HUMAN GALECTIN-3 INCOMPLEX WITH LACNAC' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 2XG3 _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.SG_entry . _pdbx_database_status.recvd_initial_deposition_date 2010-05-30 _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Diehl, C.' 1 ? 'Engstrom, O.' 2 ? 'Delaine, T.' 3 ? 'Hakansson, M.' 4 ? 'Genheden, S.' 5 ? 'Modig, K.' 6 ? 'Leffler, H.' 7 ? 'Ryde, U.' 8 ? 'Nilsson, U.' 9 ? 'Akke, M.' 10 ? # _citation.id primary _citation.title 'Protein flexibility and conformational entropy in ligand design targeting the carbohydrate recognition domain of galectin-3.' _citation.journal_abbrev 'J. Am. Chem. Soc.' _citation.journal_volume 132 _citation.page_first 14577 _citation.page_last 14589 _citation.year 2010 _citation.journal_id_ASTM JACSAT _citation.country US _citation.journal_id_ISSN 1520-5126 _citation.journal_id_CSD ? _citation.book_publisher ? _citation.pdbx_database_id_PubMed 20873837 _citation.pdbx_database_id_DOI 10.1021/ja105852y # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Diehl, C.' 1 ? primary 'Engstrom, O.' 2 ? primary 'Delaine, T.' 3 ? primary 'Hakansson, M.' 4 ? primary 'Genheden, S.' 5 ? primary 'Modig, K.' 6 ? primary 'Leffler, H.' 7 ? primary 'Ryde, U.' 8 ? primary 'Nilsson, U.J.' 9 ? primary 'Akke, M.' 10 ? # _cell.entry_id 2XG3 _cell.length_a 35.800 _cell.length_b 57.690 _cell.length_c 62.410 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2XG3 _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man Galectin-3 15675.012 1 ? ? 'RESIDUES 114-250' ? 2 branched man 'beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose' 383.349 1 ? ? ? ? 3 non-polymer syn 'CHLORIDE ION' 35.453 1 ? ? ? ? 4 non-polymer syn BENZAMIDE 121.137 1 ? ? ? ? 5 water nat water 18.015 231 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name ;Gal-3,35 kDa lectin,Carbohydrate-binding protein 35,CBP 35,Galactose-specific lectin 3,Galactoside-binding protein,GALBP,IgE-binding protein,L-31,Laminin-binding protein,Lectin L-29,Mac-2 antigen ; # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;ALIVPYNLPLPGGVVPRMLITILGTVKPNANRIALDFQRGNDVAFHFNPRFNENNRRVIVCNTKLDNNWGREERQSVFPF ESGKPFKIQVLVEPDHFKVAVNDAHLLQYNHRVKKLNEISKLGISGDIDLTSASYTMI ; _entity_poly.pdbx_seq_one_letter_code_can ;ALIVPYNLPLPGGVVPRMLITILGTVKPNANRIALDFQRGNDVAFHFNPRFNENNRRVIVCNTKLDNNWGREERQSVFPF ESGKPFKIQVLVEPDHFKVAVNDAHLLQYNHRVKKLNEISKLGISGDIDLTSASYTMI ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ALA n 1 2 LEU n 1 3 ILE n 1 4 VAL n 1 5 PRO n 1 6 TYR n 1 7 ASN n 1 8 LEU n 1 9 PRO n 1 10 LEU n 1 11 PRO n 1 12 GLY n 1 13 GLY n 1 14 VAL n 1 15 VAL n 1 16 PRO n 1 17 ARG n 1 18 MET n 1 19 LEU n 1 20 ILE n 1 21 THR n 1 22 ILE n 1 23 LEU n 1 24 GLY n 1 25 THR n 1 26 VAL n 1 27 LYS n 1 28 PRO n 1 29 ASN n 1 30 ALA n 1 31 ASN n 1 32 ARG n 1 33 ILE n 1 34 ALA n 1 35 LEU n 1 36 ASP n 1 37 PHE n 1 38 GLN n 1 39 ARG n 1 40 GLY n 1 41 ASN n 1 42 ASP n 1 43 VAL n 1 44 ALA n 1 45 PHE n 1 46 HIS n 1 47 PHE n 1 48 ASN n 1 49 PRO n 1 50 ARG n 1 51 PHE n 1 52 ASN n 1 53 GLU n 1 54 ASN n 1 55 ASN n 1 56 ARG n 1 57 ARG n 1 58 VAL n 1 59 ILE n 1 60 VAL n 1 61 CYS n 1 62 ASN n 1 63 THR n 1 64 LYS n 1 65 LEU n 1 66 ASP n 1 67 ASN n 1 68 ASN n 1 69 TRP n 1 70 GLY n 1 71 ARG n 1 72 GLU n 1 73 GLU n 1 74 ARG n 1 75 GLN n 1 76 SER n 1 77 VAL n 1 78 PHE n 1 79 PRO n 1 80 PHE n 1 81 GLU n 1 82 SER n 1 83 GLY n 1 84 LYS n 1 85 PRO n 1 86 PHE n 1 87 LYS n 1 88 ILE n 1 89 GLN n 1 90 VAL n 1 91 LEU n 1 92 VAL n 1 93 GLU n 1 94 PRO n 1 95 ASP n 1 96 HIS n 1 97 PHE n 1 98 LYS n 1 99 VAL n 1 100 ALA n 1 101 VAL n 1 102 ASN n 1 103 ASP n 1 104 ALA n 1 105 HIS n 1 106 LEU n 1 107 LEU n 1 108 GLN n 1 109 TYR n 1 110 ASN n 1 111 HIS n 1 112 ARG n 1 113 VAL n 1 114 LYS n 1 115 LYS n 1 116 LEU n 1 117 ASN n 1 118 GLU n 1 119 ILE n 1 120 SER n 1 121 LYS n 1 122 LEU n 1 123 GLY n 1 124 ILE n 1 125 SER n 1 126 GLY n 1 127 ASP n 1 128 ILE n 1 129 ASP n 1 130 LEU n 1 131 THR n 1 132 SER n 1 133 ALA n 1 134 SER n 1 135 TYR n 1 136 THR n 1 137 MET n 1 138 ILE n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 138 _entity_src_gen.gene_src_common_name Human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'LGALS3, MAC2' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21(DE3)' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant 'pLysS star' _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code LEG3_HUMAN _struct_ref.pdbx_db_accession P17931 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;LIVPYNLPLPGGVVPRMLITILGTVKPNANRIALDFQRGNDVAFHFNPRFNENNRRVIVCNTKLDNNWGREERQSVFPFE SGKPFKIQVLVEPDHFKVAVNDAHLLQYNHRVKKLNEISKLGISGDIDLTSASYTMI ; _struct_ref.pdbx_align_begin 114 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 2XG3 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 2 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 138 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P17931 _struct_ref_seq.db_align_beg 114 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 250 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 114 _struct_ref_seq.pdbx_auth_seq_align_end 250 # _struct_ref_seq_dif.align_id 1 _struct_ref_seq_dif.pdbx_pdb_id_code 2XG3 _struct_ref_seq_dif.mon_id ALA _struct_ref_seq_dif.pdbx_pdb_strand_id A _struct_ref_seq_dif.seq_num 1 _struct_ref_seq_dif.pdbx_pdb_ins_code ? _struct_ref_seq_dif.pdbx_seq_db_name UNP _struct_ref_seq_dif.pdbx_seq_db_accession_code P17931 _struct_ref_seq_dif.db_mon_id ? _struct_ref_seq_dif.pdbx_seq_db_seq_num ? _struct_ref_seq_dif.details 'expression tag' _struct_ref_seq_dif.pdbx_auth_seq_num 113 _struct_ref_seq_dif.pdbx_ordinal 1 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CL non-polymer . 'CHLORIDE ION' ? 'Cl -1' 35.453 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GAL 'D-saccharide, beta linking' . beta-D-galactopyranose ? 'C6 H12 O6' 180.156 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 NAG 'D-saccharide, beta linking' . 2-acetamido-2-deoxy-beta-D-glucopyranose ? 'C8 H15 N O6' 221.208 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 UNU non-polymer . BENZAMIDE ? 'C7 H7 N O' 121.137 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 2XG3 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 1.73 _exptl_crystal.density_percent_sol 29 _exptl_crystal.description 'A HIGHER RESOLUTION STRUCTURE OF GALECTIN TO BE PUBLISHED WAS USED AS STARTING MODEL IN REFINEMENT WITH DELETED COMPOUND' # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method ? _exptl_crystal_grow.temp ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.5 _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details 'pH 7.5' # _diffrn.id 1 _diffrn.ambient_temp 105 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'MARRESEARCH SX-165' _diffrn_detector.pdbx_collection_date 2009-03-20 _diffrn_detector.details 'MULTILAYER MIRROR' # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'BENT SILICON CRYSTAL' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.90778 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'MAX II BEAMLINE I911-2' _diffrn_source.pdbx_synchrotron_site 'MAX II' _diffrn_source.pdbx_synchrotron_beamline I911-2 _diffrn_source.pdbx_wavelength 0.90778 _diffrn_source.pdbx_wavelength_list ? # _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.entry_id 2XG3 _reflns.observed_criterion_sigma_I -10.0 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 25.00 _reflns.d_resolution_high 1.20 _reflns.number_obs 41094 _reflns.number_all ? _reflns.percent_possible_obs 99.6 _reflns.pdbx_Rmerge_I_obs 0.08 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 11.50 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 6.7 _reflns.pdbx_CC_half ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_Rrim_I_all ? # _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_ordinal 1 _reflns_shell.d_res_high 1.20 _reflns_shell.d_res_low 1.23 _reflns_shell.percent_possible_all 96.9 _reflns_shell.Rmerge_I_obs 0.66 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 2.20 _reflns_shell.pdbx_redundancy 4.9 _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_CC_half ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_Rrim_I_all ? # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 2XG3 _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs ? _refine.ls_number_reflns_all 39025 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 25.00 _refine.ls_d_res_high 1.20 _refine.ls_percent_reflns_obs 94.8 _refine.ls_R_factor_obs 0.1385 _refine.ls_R_factor_all 0.1414 _refine.ls_R_factor_R_work ? _refine.ls_R_factor_R_free 0.1934 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.3 _refine.ls_number_reflns_R_free 2050 _refine.ls_number_parameters 13969 _refine.ls_number_restraints 19364 _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.details ? _refine.pdbx_starting_model 'GALECTIN-3C IN COMPLEX WITH COMPOUND 354' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'ENGH AND HUBER G58' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.pdbx_overall_phase_error ? _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_analyze.entry_id 2XG3 _refine_analyze.Luzzati_coordinate_error_obs ? _refine_analyze.Luzzati_sigma_a_obs ? _refine_analyze.Luzzati_d_res_low_obs ? _refine_analyze.Luzzati_coordinate_error_free ? _refine_analyze.Luzzati_sigma_a_free ? _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues 45 _refine_analyze.occupancy_sum_hydrogen 1149.00 _refine_analyze.occupancy_sum_non_hydrogen 1364.00 # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1106 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 35 _refine_hist.number_atoms_solvent 231 _refine_hist.number_atoms_total 1372 _refine_hist.d_res_high 1.20 _refine_hist.d_res_low 25.00 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function s_bond_d 0.011 ? ? ? 'X-RAY DIFFRACTION' ? s_angle_d 0.031 ? ? ? 'X-RAY DIFFRACTION' ? s_similar_dist 0.000 ? ? ? 'X-RAY DIFFRACTION' ? s_from_restr_planes 0.0365 ? ? ? 'X-RAY DIFFRACTION' ? s_zero_chiral_vol 0.080 ? ? ? 'X-RAY DIFFRACTION' ? s_non_zero_chiral_vol 0.070 ? ? ? 'X-RAY DIFFRACTION' ? s_anti_bump_dis_restr 0.022 ? ? ? 'X-RAY DIFFRACTION' ? s_rigid_bond_adp_cmpnt 0.004 ? ? ? 'X-RAY DIFFRACTION' ? s_similar_adp_cmpnt 0.050 ? ? ? 'X-RAY DIFFRACTION' ? s_approx_iso_adps 0.097 ? ? ? 'X-RAY DIFFRACTION' ? # _pdbx_refine.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine.entry_id 2XG3 _pdbx_refine.R_factor_all_no_cutoff 0.1414 _pdbx_refine.R_factor_obs_no_cutoff 0.1385 _pdbx_refine.free_R_factor_no_cutoff 0.1934 _pdbx_refine.free_R_error_no_cutoff ? _pdbx_refine.free_R_val_test_set_size_perc_no_cutoff 5.3 _pdbx_refine.free_R_val_test_set_ct_no_cutoff 2050 _pdbx_refine.R_factor_all_4sig_cutoff 0.1239 _pdbx_refine.R_factor_obs_4sig_cutoff 0.1211 _pdbx_refine.free_R_factor_4sig_cutoff 0.1737 _pdbx_refine.free_R_val_test_set_size_perc_4sig_cutoff 5.3 _pdbx_refine.free_R_val_test_set_ct_4sig_cutoff 1593 _pdbx_refine.number_reflns_obs_4sig_cutoff 30159 # _struct.entry_id 2XG3 _struct.title 'Human galectin-3 in complex with a benzamido-N-acetyllactoseamine inhibitor' _struct.pdbx_descriptor GALECTIN-3 _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2XG3 _struct_keywords.pdbx_keywords 'SUGAR BINDING PROTEIN' _struct_keywords.text 'IGE-BINDING PROTEIN, LECTIN, SUGAR BINDING PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? # _struct_conf.conf_type_id HELX_P _struct_conf.id HELX_P1 _struct_conf.pdbx_PDB_helix_id 1 _struct_conf.beg_label_comp_id LYS _struct_conf.beg_label_asym_id A _struct_conf.beg_label_seq_id 115 _struct_conf.pdbx_beg_PDB_ins_code ? _struct_conf.end_label_comp_id ILE _struct_conf.end_label_asym_id A _struct_conf.end_label_seq_id 119 _struct_conf.pdbx_end_PDB_ins_code ? _struct_conf.beg_auth_comp_id LYS _struct_conf.beg_auth_asym_id A _struct_conf.beg_auth_seq_id 227 _struct_conf.end_auth_comp_id ILE _struct_conf.end_auth_asym_id A _struct_conf.end_auth_seq_id 231 _struct_conf.pdbx_PDB_helix_class 5 _struct_conf.details ? _struct_conf.pdbx_PDB_helix_length 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale one ? D UNU . N09 ? ? ? 1_555 B GAL . C3 ? ? A UNU 1253 B GAL 2 1_555 ? ? ? ? ? ? ? 1.445 ? ? covale2 covale both ? B NAG . O4 ? ? ? 1_555 B GAL . C1 ? ? B NAG 1 B GAL 2 1_555 ? ? ? ? ? ? ? 1.427 ? ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 VAL 4 A . ? VAL 116 A PRO 5 A ? PRO 117 A 1 -0.50 2 VAL 4 A . ? VAL 116 A PRO 5 A ? PRO 117 A 1 -0.10 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA ? 6 ? AB ? 6 ? AC ? 2 ? AD ? 5 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA 1 2 ? anti-parallel AA 2 3 ? anti-parallel AA 3 4 ? anti-parallel AA 4 5 ? anti-parallel AA 5 6 ? anti-parallel AB 1 2 ? anti-parallel AB 2 3 ? anti-parallel AB 3 4 ? anti-parallel AB 4 5 ? anti-parallel AB 5 6 ? anti-parallel AC 1 2 ? anti-parallel AD 1 2 ? anti-parallel AD 2 3 ? anti-parallel AD 3 4 ? anti-parallel AD 4 5 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA 1 TYR A 6 ? PRO A 9 ? TYR A 118 PRO A 121 AA 2 LYS A 121 ? GLY A 126 ? LYS A 233 GLY A 238 AA 3 ILE A 33 ? ARG A 39 ? ILE A 145 ARG A 151 AA 4 ASP A 42 ? GLU A 53 ? ASP A 154 GLU A 165 AA 5 ARG A 56 ? LEU A 65 ? ARG A 168 LEU A 177 AA 6 ASN A 68 ? TRP A 69 ? ASN A 180 TRP A 181 AB 1 TYR A 6 ? PRO A 9 ? TYR A 118 PRO A 121 AB 2 LYS A 121 ? GLY A 126 ? LYS A 233 GLY A 238 AB 3 ILE A 33 ? ARG A 39 ? ILE A 145 ARG A 151 AB 4 ASP A 42 ? GLU A 53 ? ASP A 154 GLU A 165 AB 5 ARG A 56 ? LEU A 65 ? ARG A 168 LEU A 177 AB 6 GLU A 73 ? GLN A 75 ? GLU A 185 GLN A 187 AC 1 ASN A 68 ? TRP A 69 ? ASN A 180 TRP A 181 AC 2 ARG A 56 ? LEU A 65 ? ARG A 168 LEU A 177 AD 1 ALA A 104 ? ASN A 110 ? ALA A 216 ASN A 222 AD 2 HIS A 96 ? VAL A 101 ? HIS A 208 VAL A 213 AD 3 PRO A 85 ? VAL A 92 ? PRO A 197 VAL A 204 AD 4 MET A 18 ? VAL A 26 ? MET A 130 VAL A 138 AD 5 ILE A 128 ? MET A 137 ? ILE A 240 MET A 249 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA 1 2 N LEU A 8 ? N LEU A 120 O LEU A 122 ? O LEU A 234 AA 2 3 N SER A 125 ? N SER A 237 O ALA A 34 ? O ALA A 146 AA 3 4 N ARG A 39 ? N ARG A 151 O ASP A 42 ? O ASP A 154 AA 4 5 N GLU A 53 ? N GLU A 165 O ARG A 56 ? O ARG A 168 AA 5 6 N LEU A 65 ? N LEU A 177 O ASN A 68 ? O ASN A 180 AB 1 2 N LEU A 8 ? N LEU A 120 O LEU A 122 ? O LEU A 234 AB 2 3 N SER A 125 ? N SER A 237 O ALA A 34 ? O ALA A 146 AB 3 4 N ARG A 39 ? N ARG A 151 O ASP A 42 ? O ASP A 154 AB 4 5 N GLU A 53 ? N GLU A 165 O ARG A 56 ? O ARG A 168 AB 5 6 N CYS A 61 ? N CYS A 173 O GLU A 73 ? O GLU A 185 AC 1 2 N ASN A 68 ? N ASN A 180 O LEU A 65 ? O LEU A 177 AD 1 2 N TYR A 109 ? N TYR A 221 O PHE A 97 ? O PHE A 209 AD 2 3 N ALA A 100 ? N ALA A 212 O GLN A 89 ? O GLN A 201 AD 3 4 N VAL A 92 ? N VAL A 204 O MET A 18 ? O MET A 130 AD 4 5 N THR A 25 ? N THR A 137 O ASP A 129 ? O ASP A 241 # _database_PDB_matrix.entry_id 2XG3 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 2XG3 _atom_sites.fract_transf_matrix[1][1] 0.027933 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.017334 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.016023 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C CL N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ALA 1 113 113 ALA ALA A . n A 1 2 LEU 2 114 114 LEU LEU A . n A 1 3 ILE 3 115 115 ILE ILE A . n A 1 4 VAL 4 116 116 VAL VAL A . n A 1 5 PRO 5 117 117 PRO PRO A . n A 1 6 TYR 6 118 118 TYR TYR A . n A 1 7 ASN 7 119 119 ASN ASN A . n A 1 8 LEU 8 120 120 LEU LEU A . n A 1 9 PRO 9 121 121 PRO PRO A . n A 1 10 LEU 10 122 122 LEU LEU A . n A 1 11 PRO 11 123 123 PRO PRO A . n A 1 12 GLY 12 124 124 GLY GLY A . n A 1 13 GLY 13 125 125 GLY GLY A . n A 1 14 VAL 14 126 126 VAL VAL A . n A 1 15 VAL 15 127 127 VAL VAL A . n A 1 16 PRO 16 128 128 PRO PRO A . n A 1 17 ARG 17 129 129 ARG ARG A . n A 1 18 MET 18 130 130 MET MET A . n A 1 19 LEU 19 131 131 LEU LEU A . n A 1 20 ILE 20 132 132 ILE ILE A . n A 1 21 THR 21 133 133 THR THR A . n A 1 22 ILE 22 134 134 ILE ILE A . n A 1 23 LEU 23 135 135 LEU LEU A . n A 1 24 GLY 24 136 136 GLY GLY A . n A 1 25 THR 25 137 137 THR THR A . n A 1 26 VAL 26 138 138 VAL VAL A . n A 1 27 LYS 27 139 139 LYS LYS A . n A 1 28 PRO 28 140 140 PRO PRO A . n A 1 29 ASN 29 141 141 ASN ASN A . n A 1 30 ALA 30 142 142 ALA ALA A . n A 1 31 ASN 31 143 143 ASN ASN A . n A 1 32 ARG 32 144 144 ARG ARG A . n A 1 33 ILE 33 145 145 ILE ILE A . n A 1 34 ALA 34 146 146 ALA ALA A . n A 1 35 LEU 35 147 147 LEU LEU A . n A 1 36 ASP 36 148 148 ASP ASP A . n A 1 37 PHE 37 149 149 PHE PHE A . n A 1 38 GLN 38 150 150 GLN GLN A . n A 1 39 ARG 39 151 151 ARG ARG A . n A 1 40 GLY 40 152 152 GLY GLY A . n A 1 41 ASN 41 153 153 ASN ASN A . n A 1 42 ASP 42 154 154 ASP ASP A . n A 1 43 VAL 43 155 155 VAL VAL A . n A 1 44 ALA 44 156 156 ALA ALA A . n A 1 45 PHE 45 157 157 PHE PHE A . n A 1 46 HIS 46 158 158 HIS HIS A . n A 1 47 PHE 47 159 159 PHE PHE A . n A 1 48 ASN 48 160 160 ASN ASN A . n A 1 49 PRO 49 161 161 PRO PRO A . n A 1 50 ARG 50 162 162 ARG ARG A . n A 1 51 PHE 51 163 163 PHE PHE A . n A 1 52 ASN 52 164 164 ASN ASN A . n A 1 53 GLU 53 165 165 GLU GLU A . n A 1 54 ASN 54 166 166 ASN ASN A . n A 1 55 ASN 55 167 167 ASN ASN A . n A 1 56 ARG 56 168 168 ARG ARG A . n A 1 57 ARG 57 169 169 ARG ARG A . n A 1 58 VAL 58 170 170 VAL VAL A . n A 1 59 ILE 59 171 171 ILE ILE A . n A 1 60 VAL 60 172 172 VAL VAL A . n A 1 61 CYS 61 173 173 CYS CYS A . n A 1 62 ASN 62 174 174 ASN ASN A . n A 1 63 THR 63 175 175 THR THR A . n A 1 64 LYS 64 176 176 LYS LYS A . n A 1 65 LEU 65 177 177 LEU LEU A . n A 1 66 ASP 66 178 178 ASP ASP A . n A 1 67 ASN 67 179 179 ASN ASN A . n A 1 68 ASN 68 180 180 ASN ASN A . n A 1 69 TRP 69 181 181 TRP TRP A . n A 1 70 GLY 70 182 182 GLY GLY A . n A 1 71 ARG 71 183 183 ARG ARG A . n A 1 72 GLU 72 184 184 GLU GLU A . n A 1 73 GLU 73 185 185 GLU GLU A . n A 1 74 ARG 74 186 186 ARG ARG A . n A 1 75 GLN 75 187 187 GLN GLN A . n A 1 76 SER 76 188 188 SER SER A . n A 1 77 VAL 77 189 189 VAL VAL A . n A 1 78 PHE 78 190 190 PHE PHE A . n A 1 79 PRO 79 191 191 PRO PRO A . n A 1 80 PHE 80 192 192 PHE PHE A . n A 1 81 GLU 81 193 193 GLU GLU A . n A 1 82 SER 82 194 194 SER SER A . n A 1 83 GLY 83 195 195 GLY GLY A . n A 1 84 LYS 84 196 196 LYS LYS A . n A 1 85 PRO 85 197 197 PRO PRO A . n A 1 86 PHE 86 198 198 PHE PHE A . n A 1 87 LYS 87 199 199 LYS LYS A . n A 1 88 ILE 88 200 200 ILE ILE A . n A 1 89 GLN 89 201 201 GLN GLN A . n A 1 90 VAL 90 202 202 VAL VAL A . n A 1 91 LEU 91 203 203 LEU LEU A . n A 1 92 VAL 92 204 204 VAL VAL A . n A 1 93 GLU 93 205 205 GLU GLU A . n A 1 94 PRO 94 206 206 PRO PRO A . n A 1 95 ASP 95 207 207 ASP ASP A . n A 1 96 HIS 96 208 208 HIS HIS A . n A 1 97 PHE 97 209 209 PHE PHE A . n A 1 98 LYS 98 210 210 LYS LYS A . n A 1 99 VAL 99 211 211 VAL VAL A . n A 1 100 ALA 100 212 212 ALA ALA A . n A 1 101 VAL 101 213 213 VAL VAL A . n A 1 102 ASN 102 214 214 ASN ASN A . n A 1 103 ASP 103 215 215 ASP ASP A . n A 1 104 ALA 104 216 216 ALA ALA A . n A 1 105 HIS 105 217 217 HIS HIS A . n A 1 106 LEU 106 218 218 LEU LEU A . n A 1 107 LEU 107 219 219 LEU LEU A . n A 1 108 GLN 108 220 220 GLN GLN A . n A 1 109 TYR 109 221 221 TYR TYR A . n A 1 110 ASN 110 222 222 ASN ASN A . n A 1 111 HIS 111 223 223 HIS HIS A . n A 1 112 ARG 112 224 224 ARG ARG A . n A 1 113 VAL 113 225 225 VAL VAL A . n A 1 114 LYS 114 226 226 LYS LYS A . n A 1 115 LYS 115 227 227 LYS LYS A . n A 1 116 LEU 116 228 228 LEU LEU A . n A 1 117 ASN 117 229 229 ASN ASN A . n A 1 118 GLU 118 230 230 GLU GLU A . n A 1 119 ILE 119 231 231 ILE ILE A . n A 1 120 SER 120 232 232 SER SER A . n A 1 121 LYS 121 233 233 LYS LYS A . n A 1 122 LEU 122 234 234 LEU LEU A . n A 1 123 GLY 123 235 235 GLY GLY A . n A 1 124 ILE 124 236 236 ILE ILE A . n A 1 125 SER 125 237 237 SER SER A . n A 1 126 GLY 126 238 238 GLY GLY A . n A 1 127 ASP 127 239 239 ASP ASP A . n A 1 128 ILE 128 240 240 ILE ILE A . n A 1 129 ASP 129 241 241 ASP ASP A . n A 1 130 LEU 130 242 242 LEU LEU A . n A 1 131 THR 131 243 243 THR THR A . n A 1 132 SER 132 244 244 SER SER A . n A 1 133 ALA 133 245 245 ALA ALA A . n A 1 134 SER 134 246 246 SER SER A . n A 1 135 TYR 135 247 247 TYR TYR A . n A 1 136 THR 136 248 248 THR THR A . n A 1 137 MET 137 249 249 MET MET A . n A 1 138 ILE 138 250 250 ILE ILE A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 CL 1 1252 1252 CL CL A . D 4 UNU 1 1253 1253 UNU UNU A . E 5 HOH 1 2001 2001 HOH HOH A . E 5 HOH 2 2002 2002 HOH HOH A . E 5 HOH 3 2003 2003 HOH HOH A . E 5 HOH 4 2004 2004 HOH HOH A . E 5 HOH 5 2005 2005 HOH HOH A . E 5 HOH 6 2006 2006 HOH HOH A . E 5 HOH 7 2007 2007 HOH HOH A . E 5 HOH 8 2008 2008 HOH HOH A . E 5 HOH 9 2009 2009 HOH HOH A . E 5 HOH 10 2010 2010 HOH HOH A . E 5 HOH 11 2011 2011 HOH HOH A . E 5 HOH 12 2012 2012 HOH HOH A . E 5 HOH 13 2013 2013 HOH HOH A . E 5 HOH 14 2014 2014 HOH HOH A . E 5 HOH 15 2015 2015 HOH HOH A . E 5 HOH 16 2016 2016 HOH HOH A . E 5 HOH 17 2017 2017 HOH HOH A . E 5 HOH 18 2018 2018 HOH HOH A . E 5 HOH 19 2019 2019 HOH HOH A . E 5 HOH 20 2020 2020 HOH HOH A . E 5 HOH 21 2021 2021 HOH HOH A . E 5 HOH 22 2022 2022 HOH HOH A . E 5 HOH 23 2023 2023 HOH HOH A . E 5 HOH 24 2024 2024 HOH HOH A . E 5 HOH 25 2025 2025 HOH HOH A . E 5 HOH 26 2026 2026 HOH HOH A . E 5 HOH 27 2027 2027 HOH HOH A . E 5 HOH 28 2028 2028 HOH HOH A . E 5 HOH 29 2029 2029 HOH HOH A . E 5 HOH 30 2030 2030 HOH HOH A . E 5 HOH 31 2031 2031 HOH HOH A . E 5 HOH 32 2032 2032 HOH HOH A . E 5 HOH 33 2033 2033 HOH HOH A . E 5 HOH 34 2034 2034 HOH HOH A . E 5 HOH 35 2035 2035 HOH HOH A . E 5 HOH 36 2036 2036 HOH HOH A . E 5 HOH 37 2037 2037 HOH HOH A . E 5 HOH 38 2038 2038 HOH HOH A . E 5 HOH 39 2039 2039 HOH HOH A . E 5 HOH 40 2040 2040 HOH HOH A . E 5 HOH 41 2041 2041 HOH HOH A . E 5 HOH 42 2042 2042 HOH HOH A . E 5 HOH 43 2043 2043 HOH HOH A . E 5 HOH 44 2044 2044 HOH HOH A . E 5 HOH 45 2045 2045 HOH HOH A . E 5 HOH 46 2046 2046 HOH HOH A . E 5 HOH 47 2047 2047 HOH HOH A . E 5 HOH 48 2048 2048 HOH HOH A . E 5 HOH 49 2049 2049 HOH HOH A . E 5 HOH 50 2050 2050 HOH HOH A . E 5 HOH 51 2051 2051 HOH HOH A . E 5 HOH 52 2052 2052 HOH HOH A . E 5 HOH 53 2053 2053 HOH HOH A . E 5 HOH 54 2054 2054 HOH HOH A . E 5 HOH 55 2055 2055 HOH HOH A . E 5 HOH 56 2056 2056 HOH HOH A . E 5 HOH 57 2057 2057 HOH HOH A . E 5 HOH 58 2058 2058 HOH HOH A . E 5 HOH 59 2059 2059 HOH HOH A . E 5 HOH 60 2060 2060 HOH HOH A . E 5 HOH 61 2061 2061 HOH HOH A . E 5 HOH 62 2062 2062 HOH HOH A . E 5 HOH 63 2063 2063 HOH HOH A . E 5 HOH 64 2064 2064 HOH HOH A . E 5 HOH 65 2065 2065 HOH HOH A . E 5 HOH 66 2066 2066 HOH HOH A . E 5 HOH 67 2067 2067 HOH HOH A . E 5 HOH 68 2068 2068 HOH HOH A . E 5 HOH 69 2069 2069 HOH HOH A . E 5 HOH 70 2070 2070 HOH HOH A . E 5 HOH 71 2071 2071 HOH HOH A . E 5 HOH 72 2072 2072 HOH HOH A . E 5 HOH 73 2073 2073 HOH HOH A . E 5 HOH 74 2074 2074 HOH HOH A . E 5 HOH 75 2075 2075 HOH HOH A . E 5 HOH 76 2076 2076 HOH HOH A . E 5 HOH 77 2077 2077 HOH HOH A . E 5 HOH 78 2078 2078 HOH HOH A . E 5 HOH 79 2079 2079 HOH HOH A . E 5 HOH 80 2080 2080 HOH HOH A . E 5 HOH 81 2081 2081 HOH HOH A . E 5 HOH 82 2082 2082 HOH HOH A . E 5 HOH 83 2083 2083 HOH HOH A . E 5 HOH 84 2084 2084 HOH HOH A . E 5 HOH 85 2085 2085 HOH HOH A . E 5 HOH 86 2086 2086 HOH HOH A . E 5 HOH 87 2087 2087 HOH HOH A . E 5 HOH 88 2088 2088 HOH HOH A . E 5 HOH 89 2089 2089 HOH HOH A . E 5 HOH 90 2090 2090 HOH HOH A . E 5 HOH 91 2091 2091 HOH HOH A . E 5 HOH 92 2092 2092 HOH HOH A . E 5 HOH 93 2093 2093 HOH HOH A . E 5 HOH 94 2094 2094 HOH HOH A . E 5 HOH 95 2095 2095 HOH HOH A . E 5 HOH 96 2096 2096 HOH HOH A . E 5 HOH 97 2097 2097 HOH HOH A . E 5 HOH 98 2098 2098 HOH HOH A . E 5 HOH 99 2099 2099 HOH HOH A . E 5 HOH 100 2100 2100 HOH HOH A . E 5 HOH 101 2101 2101 HOH HOH A . E 5 HOH 102 2102 2102 HOH HOH A . E 5 HOH 103 2103 2103 HOH HOH A . E 5 HOH 104 2104 2104 HOH HOH A . E 5 HOH 105 2105 2105 HOH HOH A . E 5 HOH 106 2106 2106 HOH HOH A . E 5 HOH 107 2107 2107 HOH HOH A . E 5 HOH 108 2108 2108 HOH HOH A . E 5 HOH 109 2109 2109 HOH HOH A . E 5 HOH 110 2110 2110 HOH HOH A . E 5 HOH 111 2111 2111 HOH HOH A . E 5 HOH 112 2112 2112 HOH HOH A . E 5 HOH 113 2113 2113 HOH HOH A . E 5 HOH 114 2114 2114 HOH HOH A . E 5 HOH 115 2115 2115 HOH HOH A . E 5 HOH 116 2116 2116 HOH HOH A . E 5 HOH 117 2117 2117 HOH HOH A . E 5 HOH 118 2118 2118 HOH HOH A . E 5 HOH 119 2119 2119 HOH HOH A . E 5 HOH 120 2120 2120 HOH HOH A . E 5 HOH 121 2121 2121 HOH HOH A . E 5 HOH 122 2122 2122 HOH HOH A . E 5 HOH 123 2123 2123 HOH HOH A . E 5 HOH 124 2124 2124 HOH HOH A . E 5 HOH 125 2125 2125 HOH HOH A . E 5 HOH 126 2126 2126 HOH HOH A . E 5 HOH 127 2127 2127 HOH HOH A . E 5 HOH 128 2128 2128 HOH HOH A . E 5 HOH 129 2129 2129 HOH HOH A . E 5 HOH 130 2130 2130 HOH HOH A . E 5 HOH 131 2131 2131 HOH HOH A . E 5 HOH 132 2132 2132 HOH HOH A . E 5 HOH 133 2133 2133 HOH HOH A . E 5 HOH 134 2134 2134 HOH HOH A . E 5 HOH 135 2135 2135 HOH HOH A . E 5 HOH 136 2136 2136 HOH HOH A . E 5 HOH 137 2137 2137 HOH HOH A . E 5 HOH 138 2138 2138 HOH HOH A . E 5 HOH 139 2139 2139 HOH HOH A . E 5 HOH 140 2140 2140 HOH HOH A . E 5 HOH 141 2141 2141 HOH HOH A . E 5 HOH 142 2142 2142 HOH HOH A . E 5 HOH 143 2143 2143 HOH HOH A . E 5 HOH 144 2144 2144 HOH HOH A . E 5 HOH 145 2145 2145 HOH HOH A . E 5 HOH 146 2146 2146 HOH HOH A . E 5 HOH 147 2147 2147 HOH HOH A . E 5 HOH 148 2148 2148 HOH HOH A . E 5 HOH 149 2149 2149 HOH HOH A . E 5 HOH 150 2150 2150 HOH HOH A . E 5 HOH 151 2151 2151 HOH HOH A . E 5 HOH 152 2152 2152 HOH HOH A . E 5 HOH 153 2153 2153 HOH HOH A . E 5 HOH 154 2154 2154 HOH HOH A . E 5 HOH 155 2155 2155 HOH HOH A . E 5 HOH 156 2156 2156 HOH HOH A . E 5 HOH 157 2157 2157 HOH HOH A . E 5 HOH 158 2158 2158 HOH HOH A . E 5 HOH 159 2159 2159 HOH HOH A . E 5 HOH 160 2160 2160 HOH HOH A . E 5 HOH 161 2161 2161 HOH HOH A . E 5 HOH 162 2162 2162 HOH HOH A . E 5 HOH 163 2163 2163 HOH HOH A . E 5 HOH 164 2164 2164 HOH HOH A . E 5 HOH 165 2165 2165 HOH HOH A . E 5 HOH 166 2166 2166 HOH HOH A . E 5 HOH 167 2167 2167 HOH HOH A . E 5 HOH 168 2168 2168 HOH HOH A . E 5 HOH 169 2169 2169 HOH HOH A . E 5 HOH 170 2170 2170 HOH HOH A . E 5 HOH 171 2171 2171 HOH HOH A . E 5 HOH 172 2172 2172 HOH HOH A . E 5 HOH 173 2173 2173 HOH HOH A . E 5 HOH 174 2174 2174 HOH HOH A . E 5 HOH 175 2175 2175 HOH HOH A . E 5 HOH 176 2176 2176 HOH HOH A . E 5 HOH 177 2177 2177 HOH HOH A . E 5 HOH 178 2178 2178 HOH HOH A . E 5 HOH 179 2179 2179 HOH HOH A . E 5 HOH 180 2180 2180 HOH HOH A . E 5 HOH 181 2181 2181 HOH HOH A . E 5 HOH 182 2182 2182 HOH HOH A . E 5 HOH 183 2183 2183 HOH HOH A . E 5 HOH 184 2184 2184 HOH HOH A . E 5 HOH 185 2185 2185 HOH HOH A . E 5 HOH 186 2186 2186 HOH HOH A . E 5 HOH 187 2187 2187 HOH HOH A . E 5 HOH 188 2188 2188 HOH HOH A . E 5 HOH 189 2189 2189 HOH HOH A . E 5 HOH 190 2190 2190 HOH HOH A . E 5 HOH 191 2191 2191 HOH HOH A . E 5 HOH 192 2192 2192 HOH HOH A . E 5 HOH 193 2193 2193 HOH HOH A . E 5 HOH 194 2194 2194 HOH HOH A . E 5 HOH 195 2195 2195 HOH HOH A . E 5 HOH 196 2196 2196 HOH HOH A . E 5 HOH 197 2197 2197 HOH HOH A . E 5 HOH 198 2198 2198 HOH HOH A . E 5 HOH 199 2199 2199 HOH HOH A . E 5 HOH 200 2200 2200 HOH HOH A . E 5 HOH 201 2201 2201 HOH HOH A . E 5 HOH 202 2202 2202 HOH HOH A . E 5 HOH 203 2203 2203 HOH HOH A . E 5 HOH 204 2204 2204 HOH HOH A . E 5 HOH 205 2205 2205 HOH HOH A . E 5 HOH 206 2206 2206 HOH HOH A . E 5 HOH 207 2207 2207 HOH HOH A . E 5 HOH 208 2208 2208 HOH HOH A . E 5 HOH 209 2209 2209 HOH HOH A . E 5 HOH 210 2210 2210 HOH HOH A . E 5 HOH 211 2211 2211 HOH HOH A . E 5 HOH 212 2212 2212 HOH HOH A . E 5 HOH 213 2213 2213 HOH HOH A . E 5 HOH 214 2214 2214 HOH HOH A . E 5 HOH 215 2215 2215 HOH HOH A . E 5 HOH 216 2216 2216 HOH HOH A . E 5 HOH 217 2217 2217 HOH HOH A . E 5 HOH 218 2218 2218 HOH HOH A . E 5 HOH 219 2219 2219 HOH HOH A . E 5 HOH 220 2220 2220 HOH HOH A . E 5 HOH 221 2221 2221 HOH HOH A . E 5 HOH 222 2222 2222 HOH HOH A . E 5 HOH 223 2223 2223 HOH HOH A . E 5 HOH 224 2224 2224 HOH HOH A . E 5 HOH 225 2225 2225 HOH HOH A . E 5 HOH 226 2226 2226 HOH HOH A . E 5 HOH 227 2227 2227 HOH HOH A . E 5 HOH 228 2228 2228 HOH HOH A . E 5 HOH 229 2229 2229 HOH HOH A . E 5 HOH 230 2230 2230 HOH HOH A . E 5 HOH 231 2231 2231 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2010-10-13 2 'Structure model' 1 1 2011-06-30 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2018-01-17 5 'Structure model' 1 4 2018-12-05 6 'Structure model' 1 5 2019-05-22 7 'Structure model' 2 0 2020-07-29 # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description _pdbx_audit_revision_details.details 1 1 'Structure model' repository 'Initial release' ? ? 2 7 'Structure model' repository Remediation 'Carbohydrate remediation' ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Data collection' 4 5 'Structure model' 'Data collection' 5 5 'Structure model' 'Database references' 6 5 'Structure model' 'Source and taxonomy' 7 5 'Structure model' 'Structure summary' 8 6 'Structure model' 'Data collection' 9 6 'Structure model' 'Derived calculations' 10 6 'Structure model' 'Refinement description' 11 7 'Structure model' 'Atomic model' 12 7 'Structure model' 'Data collection' 13 7 'Structure model' 'Derived calculations' 14 7 'Structure model' Other 15 7 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' diffrn_source 2 5 'Structure model' citation 3 5 'Structure model' citation_author 4 5 'Structure model' entity 5 5 'Structure model' entity_name_com 6 5 'Structure model' entity_src_gen 7 5 'Structure model' pdbx_entity_src_syn 8 5 'Structure model' struct_ref 9 6 'Structure model' refine 10 6 'Structure model' struct_conn 11 7 'Structure model' atom_site 12 7 'Structure model' atom_site_anisotrop 13 7 'Structure model' chem_comp 14 7 'Structure model' entity 15 7 'Structure model' pdbx_branch_scheme 16 7 'Structure model' pdbx_chem_comp_identifier 17 7 'Structure model' pdbx_database_status 18 7 'Structure model' pdbx_entity_branch 19 7 'Structure model' pdbx_entity_branch_descriptor 20 7 'Structure model' pdbx_entity_branch_link 21 7 'Structure model' pdbx_entity_branch_list 22 7 'Structure model' pdbx_entity_nonpoly 23 7 'Structure model' pdbx_nonpoly_scheme 24 7 'Structure model' pdbx_struct_assembly_gen 25 7 'Structure model' struct_asym 26 7 'Structure model' struct_conn 27 7 'Structure model' struct_site 28 7 'Structure model' struct_site_gen # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_diffrn_source.pdbx_synchrotron_site' 2 5 'Structure model' '_citation.journal_abbrev' 3 5 'Structure model' '_citation.journal_id_CSD' 4 5 'Structure model' '_citation.journal_id_ISSN' 5 5 'Structure model' '_citation.page_last' 6 5 'Structure model' '_citation.pdbx_database_id_DOI' 7 5 'Structure model' '_citation.title' 8 5 'Structure model' '_citation_author.name' 9 5 'Structure model' '_entity.pdbx_description' 10 5 'Structure model' '_entity.src_method' 11 5 'Structure model' '_entity_name_com.name' 12 5 'Structure model' '_struct_ref.pdbx_align_begin' 13 5 'Structure model' '_struct_ref.pdbx_seq_one_letter_code' 14 6 'Structure model' '_refine.pdbx_ls_cross_valid_method' 15 6 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 16 7 'Structure model' '_atom_site.B_iso_or_equiv' 17 7 'Structure model' '_atom_site.Cartn_x' 18 7 'Structure model' '_atom_site.Cartn_y' 19 7 'Structure model' '_atom_site.Cartn_z' 20 7 'Structure model' '_atom_site.auth_asym_id' 21 7 'Structure model' '_atom_site.auth_atom_id' 22 7 'Structure model' '_atom_site.auth_comp_id' 23 7 'Structure model' '_atom_site.auth_seq_id' 24 7 'Structure model' '_atom_site.label_asym_id' 25 7 'Structure model' '_atom_site.label_atom_id' 26 7 'Structure model' '_atom_site.label_comp_id' 27 7 'Structure model' '_atom_site.label_entity_id' 28 7 'Structure model' '_atom_site.type_symbol' 29 7 'Structure model' '_atom_site_anisotrop.U[1][1]' 30 7 'Structure model' '_atom_site_anisotrop.U[1][2]' 31 7 'Structure model' '_atom_site_anisotrop.U[1][3]' 32 7 'Structure model' '_atom_site_anisotrop.U[2][2]' 33 7 'Structure model' '_atom_site_anisotrop.U[2][3]' 34 7 'Structure model' '_atom_site_anisotrop.U[3][3]' 35 7 'Structure model' '_atom_site_anisotrop.pdbx_auth_asym_id' 36 7 'Structure model' '_atom_site_anisotrop.pdbx_auth_atom_id' 37 7 'Structure model' '_atom_site_anisotrop.pdbx_auth_comp_id' 38 7 'Structure model' '_atom_site_anisotrop.pdbx_auth_seq_id' 39 7 'Structure model' '_atom_site_anisotrop.pdbx_label_asym_id' 40 7 'Structure model' '_atom_site_anisotrop.pdbx_label_atom_id' 41 7 'Structure model' '_atom_site_anisotrop.pdbx_label_comp_id' 42 7 'Structure model' '_atom_site_anisotrop.type_symbol' 43 7 'Structure model' '_chem_comp.name' 44 7 'Structure model' '_chem_comp.type' 45 7 'Structure model' '_pdbx_database_status.status_code_sf' 46 7 'Structure model' '_pdbx_struct_assembly_gen.asym_id_list' 47 7 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 48 7 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 49 7 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 50 7 'Structure model' '_struct_conn.ptnr1_label_asym_id' 51 7 'Structure model' '_struct_conn.ptnr1_label_atom_id' 52 7 'Structure model' '_struct_conn.ptnr1_label_comp_id' 53 7 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 54 7 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 55 7 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 56 7 'Structure model' '_struct_conn.ptnr2_label_asym_id' 57 7 'Structure model' '_struct_conn.ptnr2_label_atom_id' 58 7 'Structure model' '_struct_conn.ptnr2_label_comp_id' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal _software.date _software.type _software.location _software.language SHELXL-97 refinement . ? 1 ? ? ? ? XDS 'data reduction' . ? 2 ? ? ? ? XSCALE 'data scaling' . ? 3 ? ? ? ? SHELXL phasing . ? 4 ? ? ? ? # _pdbx_entry_details.entry_id 2XG3 _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ;THE CARBOHYDRATE RECOGNITION DOMAIN IN THIS CONSTRUCT STARTS WITH A114 (INSTEAD OF P114) OTHERWISE IT IS THE SAME SEQUENCE ; _pdbx_entry_details.has_ligand_of_interest ? # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 NE A ARG 168 ? A CZ A ARG 168 ? A NH1 A ARG 168 ? A 116.56 120.30 -3.74 0.50 N 2 1 NE A ARG 169 ? ? CZ A ARG 169 ? ? NH1 A ARG 169 ? ? 124.86 120.30 4.56 0.50 N 3 1 NE A ARG 169 ? ? CZ A ARG 169 ? ? NH2 A ARG 169 ? ? 114.99 120.30 -5.31 0.50 N 4 1 NE A ARG 186 ? B CZ A ARG 186 ? B NH1 A ARG 186 ? B 123.53 120.30 3.23 0.50 N 5 1 C A ARG 186 ? A N A GLN 187 ? A CA A GLN 187 ? A 137.19 121.70 15.49 2.50 Y 6 1 CB A TYR 221 ? ? CG A TYR 221 ? ? CD2 A TYR 221 ? ? 126.06 121.00 5.06 0.60 N 7 1 NE A ARG 224 ? ? CZ A ARG 224 ? ? NH1 A ARG 224 ? ? 123.85 120.30 3.55 0.50 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ARG A 129 ? ? 89.05 -1.80 2 1 ARG A 129 ? ? 82.67 7.06 3 1 ASN A 141 ? A 38.09 38.49 4 1 ASN A 164 ? ? -153.45 82.80 # _pdbx_validate_peptide_omega.id 1 _pdbx_validate_peptide_omega.PDB_model_num 1 _pdbx_validate_peptide_omega.auth_comp_id_1 ALA _pdbx_validate_peptide_omega.auth_asym_id_1 A _pdbx_validate_peptide_omega.auth_seq_id_1 113 _pdbx_validate_peptide_omega.PDB_ins_code_1 ? _pdbx_validate_peptide_omega.label_alt_id_1 B _pdbx_validate_peptide_omega.auth_comp_id_2 LEU _pdbx_validate_peptide_omega.auth_asym_id_2 A _pdbx_validate_peptide_omega.auth_seq_id_2 114 _pdbx_validate_peptide_omega.PDB_ins_code_2 ? _pdbx_validate_peptide_omega.label_alt_id_2 ? _pdbx_validate_peptide_omega.omega -142.20 # loop_ _pdbx_distant_solvent_atoms.id _pdbx_distant_solvent_atoms.PDB_model_num _pdbx_distant_solvent_atoms.auth_atom_id _pdbx_distant_solvent_atoms.label_alt_id _pdbx_distant_solvent_atoms.auth_asym_id _pdbx_distant_solvent_atoms.auth_comp_id _pdbx_distant_solvent_atoms.auth_seq_id _pdbx_distant_solvent_atoms.PDB_ins_code _pdbx_distant_solvent_atoms.neighbor_macromolecule_distance _pdbx_distant_solvent_atoms.neighbor_ligand_distance 1 1 O ? A HOH 2064 ? 5.91 . 2 1 O ? A HOH 2095 ? 6.61 . 3 1 O ? A HOH 2125 ? 6.43 . # loop_ _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_mon_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.hetero B 2 NAG 1 B NAG 1 A NAG 1255 n B 2 GAL 2 B GAL 2 A GAL 1254 n # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier GAL 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGalpb GAL 'COMMON NAME' GMML 1.0 b-D-galactopyranose GAL 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-Galp GAL 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 Gal NAG 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGlcpNAcb NAG 'COMMON NAME' GMML 1.0 N-acetyl-b-D-glucopyranosamine NAG 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-GlcpNAc NAG 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 GlcNAc # _pdbx_entity_branch.entity_id 2 _pdbx_entity_branch.type oligosaccharide # loop_ _pdbx_entity_branch_descriptor.ordinal _pdbx_entity_branch_descriptor.entity_id _pdbx_entity_branch_descriptor.descriptor _pdbx_entity_branch_descriptor.type _pdbx_entity_branch_descriptor.program _pdbx_entity_branch_descriptor.program_version 1 2 DGalpb1-4DGlcpNAcb1-ROH 'Glycam Condensed Sequence' GMML 1.0 2 2 'WURCS=2.0/2,2,1/[a2122h-1b_1-5_2*NCC/3=O][a2112h-1b_1-5]/1-2/a4-b1' WURCS PDB2Glycan 1.1.0 3 2 '[][b-D-GlcpNAc]{[(4+1)][b-D-3-deoxy-Galp]{}}' LINUCS PDB-CARE ? # _pdbx_entity_branch_link.link_id 1 _pdbx_entity_branch_link.entity_id 2 _pdbx_entity_branch_link.entity_branch_list_num_1 2 _pdbx_entity_branch_link.comp_id_1 GAL _pdbx_entity_branch_link.atom_id_1 C1 _pdbx_entity_branch_link.leaving_atom_id_1 O1 _pdbx_entity_branch_link.entity_branch_list_num_2 1 _pdbx_entity_branch_link.comp_id_2 NAG _pdbx_entity_branch_link.atom_id_2 O4 _pdbx_entity_branch_link.leaving_atom_id_2 HO4 _pdbx_entity_branch_link.value_order sing _pdbx_entity_branch_link.details ? # loop_ _pdbx_entity_branch_list.entity_id _pdbx_entity_branch_list.comp_id _pdbx_entity_branch_list.num _pdbx_entity_branch_list.hetero 2 NAG 1 n 2 GAL 2 n # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 3 'CHLORIDE ION' CL 4 BENZAMIDE UNU 5 water HOH #