HEADER VIRAL PROTEIN/ISOMERASE 08-JUN-10 2XGY TITLE COMPLEX OF RABBIT ENDOGENOUS LENTIVIRUS (RELIK)CAPSID WITH TITLE 2 CYCLOPHILIN A COMPND MOL_ID: 1; COMPND 2 MOLECULE: RELIK CAPSID N-TERMINAL DOMAIN; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: PEPTIDYL-PROLYL CIS-TRANS ISOMERASE A; COMPND 7 CHAIN: B; COMPND 8 SYNONYM: PPIASE A, ROTAMASE A, CYCLOPHILIN A, CYCLOSPORIN A-BINDING COMPND 9 PROTEIN; COMPND 10 EC: 5.2.1.8; COMPND 11 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ORYCTOLAGUS CUNICULUS; SOURCE 3 ORGANISM_COMMON: RABBIT; SOURCE 4 ORGANISM_TAXID: 9986; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PET22B; SOURCE 9 OTHER_DETAILS: SYNTHESISED RECONSTRUCTED GENE; SOURCE 10 MOL_ID: 2; SOURCE 11 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 12 ORGANISM_COMMON: HUMAN; SOURCE 13 ORGANISM_TAXID: 9606; SOURCE 14 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 15 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 16 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 17 EXPRESSION_SYSTEM_PLASMID: PGEX-6P1 KEYWDS VIRAL PROTEIN-ISOMERASE COMPLEX, RETROVIRAL CAPSID, ENDOGENOUS EXPDTA X-RAY DIFFRACTION AUTHOR D.C.GOLDSTONE,L.E.ROBERTSON,L.F.HAIRE,J.P.STOYE,I.A.TAYLOR REVDAT 1 22-SEP-10 2XGY 0 JRNL AUTH D.C.GOLDSTONE,M.W.YAP,L.E.ROBERTSON,L.F.HAIRE,W.R.TAYLOR, JRNL AUTH 2 A.KATZOURAKIS,J.P.STOYE,I.A.TAYLOR JRNL TITL STRUCTURAL AND FUNCTIONAL ANALYSIS OF PREHISTORIC JRNL TITL 2 LENTIVIRUSES UNCOVERS AN ANCIENT MOLECULAR INTERFACE. JRNL REF CELL HOST MICROBE V. 8 248 2010 JRNL REFN ISSN 1931-3128 JRNL PMID 20833376 JRNL DOI 10.1016/J.CHOM.2010.08.006 REMARK 2 REMARK 2 RESOLUTION. 1.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VICENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.800 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 24.482 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.34 REMARK 3 COMPLETENESS FOR RANGE (%) : 96.86 REMARK 3 NUMBER OF REFLECTIONS : 35141 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.1574 REMARK 3 R VALUE (WORKING SET) : 0.1558 REMARK 3 FREE R VALUE : 0.1874 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.0 REMARK 3 FREE R VALUE TEST SET COUNT : 1756 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 24.4845 - 4.2257 1.00 2728 151 0.1575 0.1712 REMARK 3 2 4.2257 - 3.3568 0.99 2666 131 0.1303 0.1655 REMARK 3 3 3.3568 - 2.9333 0.99 2621 146 0.1542 0.1858 REMARK 3 4 2.9333 - 2.6655 0.98 2607 135 0.1508 0.1963 REMARK 3 5 2.6655 - 2.4746 0.98 2600 138 0.1546 0.1959 REMARK 3 6 2.4746 - 2.3288 0.97 2565 137 0.1487 0.1814 REMARK 3 7 2.3288 - 2.2123 0.97 2554 142 0.1450 0.1791 REMARK 3 8 2.2123 - 2.1160 0.97 2533 139 0.1445 0.2015 REMARK 3 9 2.1160 - 2.0346 0.96 2545 115 0.1473 0.1658 REMARK 3 10 2.0346 - 1.9644 0.95 2491 129 0.1486 0.1913 REMARK 3 11 1.9644 - 1.9030 0.96 2533 128 0.1539 0.2054 REMARK 3 12 1.9030 - 1.8487 0.94 2463 139 0.1728 0.1914 REMARK 3 13 1.8487 - 1.8000 0.93 2479 126 0.2100 0.2844 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : 0.366 REMARK 3 B_SOL : 57.894 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.31 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 17.24 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 30.39 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 35.1 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 1.6015 REMARK 3 B22 (A**2) : 1.6015 REMARK 3 B33 (A**2) : -3.2031 REMARK 3 B12 (A**2) : -0.0000 REMARK 3 B13 (A**2) : -0.0000 REMARK 3 B23 (A**2) : -0.0000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.005 2300 REMARK 3 ANGLE : 0.931 3108 REMARK 3 CHIRALITY : 0.063 337 REMARK 3 PLANARITY : 0.004 405 REMARK 3 DIHEDRAL : 15.660 828 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 18 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: (CHAIN A AND RESID 1:14) REMARK 3 ORIGIN FOR THE GROUP (A): 43.4717 -22.9068 6.5899 REMARK 3 T TENSOR REMARK 3 T11: 0.4612 T22: 0.3595 REMARK 3 T33: 0.6405 T12: -0.2357 REMARK 3 T13: -0.1071 T23: 0.0608 REMARK 3 L TENSOR REMARK 3 L11: 2.0359 L22: 5.4402 REMARK 3 L33: 2.8044 L12: 2.0048 REMARK 3 L13: -1.5261 L23: 1.2639 REMARK 3 S TENSOR REMARK 3 S11: 0.0468 S12: 0.5799 S13: -0.4278 REMARK 3 S21: 1.2256 S22: -0.5864 S23: -1.3691 REMARK 3 S31: -1.2714 S32: 0.1146 S33: 0.8172 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: (CHAIN A AND RESID 15:29) REMARK 3 ORIGIN FOR THE GROUP (A): 28.7404 -11.4715 4.7440 REMARK 3 T TENSOR REMARK 3 T11: 0.5874 T22: 0.2021 REMARK 3 T33: 0.4411 T12: -0.0446 REMARK 3 T13: 0.1388 T23: -0.0252 REMARK 3 L TENSOR REMARK 3 L11: 4.0056 L22: -1.6366 REMARK 3 L33: 1.3569 L12: 2.2023 REMARK 3 L13: 0.8577 L23: 1.0772 REMARK 3 S TENSOR REMARK 3 S11: 0.3663 S12: -0.1571 S13: 1.0296 REMARK 3 S21: 0.1998 S22: -0.2299 S23: 0.3070 REMARK 3 S31: -0.4961 S32: -0.1128 S33: -0.0797 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: (CHAIN A AND RESID 30:45) REMARK 3 ORIGIN FOR THE GROUP (A): 27.4403 -18.4287 -2.2514 REMARK 3 T TENSOR REMARK 3 T11: 0.3961 T22: 0.2212 REMARK 3 T33: 0.2876 T12: -0.0127 REMARK 3 T13: 0.0778 T23: 0.0622 REMARK 3 L TENSOR REMARK 3 L11: 1.7247 L22: 1.9118 REMARK 3 L33: 0.1027 L12: -0.9471 REMARK 3 L13: 0.0442 L23: -0.1182 REMARK 3 S TENSOR REMARK 3 S11: -0.0868 S12: 0.2772 S13: -0.2254 REMARK 3 S21: -0.2230 S22: 0.0402 S23: 0.1692 REMARK 3 S31: -0.2040 S32: -0.0039 S33: 0.0312 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: (CHAIN A AND RESID 46:52) REMARK 3 ORIGIN FOR THE GROUP (A): 35.7494 -25.6124 5.6862 REMARK 3 T TENSOR REMARK 3 T11: 0.3210 T22: 0.3018 REMARK 3 T33: 0.2757 T12: -0.0936 REMARK 3 T13: 0.0449 T23: 0.0257 REMARK 3 L TENSOR REMARK 3 L11: 3.9741 L22: 3.9525 REMARK 3 L33: 2.8932 L12: 1.8723 REMARK 3 L13: -1.1503 L23: -5.0118 REMARK 3 S TENSOR REMARK 3 S11: -0.1948 S12: 0.5239 S13: -0.0539 REMARK 3 S21: 0.0366 S22: -0.1351 S23: -0.6505 REMARK 3 S31: -0.3575 S32: 0.5450 S33: 0.2776 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: (CHAIN A AND RESID 53:60) REMARK 3 ORIGIN FOR THE GROUP (A): 27.6935 -20.2554 10.3625 REMARK 3 T TENSOR REMARK 3 T11: 0.4635 T22: 0.3179 REMARK 3 T33: 0.3109 T12: -0.0445 REMARK 3 T13: 0.1236 T23: -0.0467 REMARK 3 L TENSOR REMARK 3 L11: 5.8112 L22: 6.9662 REMARK 3 L33: 4.1186 L12: -2.4543 REMARK 3 L13: -2.1150 L23: 2.5718 REMARK 3 S TENSOR REMARK 3 S11: -0.2231 S12: -0.7687 S13: 0.5398 REMARK 3 S21: 1.4475 S22: -0.0250 S23: 0.4816 REMARK 3 S31: -0.3538 S32: 0.2041 S33: 0.1201 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: (CHAIN A AND RESID 61:69) REMARK 3 ORIGIN FOR THE GROUP (A): 16.9115 -21.7086 7.4965 REMARK 3 T TENSOR REMARK 3 T11: 0.3412 T22: 0.3284 REMARK 3 T33: 0.5565 T12: 0.0240 REMARK 3 T13: 0.1903 T23: 0.0120 REMARK 3 L TENSOR REMARK 3 L11: 3.4981 L22: 4.0327 REMARK 3 L33: 3.7206 L12: -2.2358 REMARK 3 L13: -4.2353 L23: 0.7333 REMARK 3 S TENSOR REMARK 3 S11: 0.7864 S12: 0.3930 S13: 1.0540 REMARK 3 S21: 0.2230 S22: -0.1265 S23: 0.9789 REMARK 3 S31: -0.1259 S32: -0.9991 S33: -0.6273 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: (CHAIN A AND RESID 70:85) REMARK 3 ORIGIN FOR THE GROUP (A): 21.0842 -37.9000 5.2292 REMARK 3 T TENSOR REMARK 3 T11: 0.2347 T22: 0.2986 REMARK 3 T33: 0.2764 T12: -0.0559 REMARK 3 T13: 0.0221 T23: 0.0010 REMARK 3 L TENSOR REMARK 3 L11: -0.4805 L22: 7.2978 REMARK 3 L33: 1.0687 L12: 1.5853 REMARK 3 L13: -0.4765 L23: -0.9843 REMARK 3 S TENSOR REMARK 3 S11: -0.0837 S12: 0.0941 S13: -0.0579 REMARK 3 S21: 0.0437 S22: 0.1557 S23: 0.8639 REMARK 3 S31: 0.1671 S32: -0.3510 S33: -0.0642 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: (CHAIN A AND RESID 86:109) REMARK 3 ORIGIN FOR THE GROUP (A): 31.6601 -42.6074 11.4796 REMARK 3 T TENSOR REMARK 3 T11: 0.3335 T22: 0.3060 REMARK 3 T33: 0.2618 T12: -0.0372 REMARK 3 T13: 0.0374 T23: 0.0475 REMARK 3 L TENSOR REMARK 3 L11: -0.1985 L22: 2.9527 REMARK 3 L33: -0.7823 L12: -0.5627 REMARK 3 L13: -0.0796 L23: 1.2942 REMARK 3 S TENSOR REMARK 3 S11: -0.0305 S12: -0.2074 S13: -0.1126 REMARK 3 S21: 0.7342 S22: -0.0664 S23: -0.0004 REMARK 3 S31: 0.1022 S32: 0.0978 S33: 0.0765 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: (CHAIN A AND RESID 110:118) REMARK 3 ORIGIN FOR THE GROUP (A): 41.0684 -35.1320 7.6854 REMARK 3 T TENSOR REMARK 3 T11: 0.2041 T22: 0.3120 REMARK 3 T33: 0.4201 T12: -0.0728 REMARK 3 T13: -0.0269 T23: -0.0270 REMARK 3 L TENSOR REMARK 3 L11: -4.3971 L22: 7.7166 REMARK 3 L33: 2.5416 L12: -1.6483 REMARK 3 L13: -3.4906 L23: 2.1686 REMARK 3 S TENSOR REMARK 3 S11: 0.1832 S12: -0.0315 S13: -0.1844 REMARK 3 S21: -0.1505 S22: 0.1590 S23: -1.7432 REMARK 3 S31: 0.1733 S32: 0.7560 S33: -0.3026 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: (CHAIN A AND RESID 119:136) REMARK 3 ORIGIN FOR THE GROUP (A): 26.3751 -29.1643 -0.7039 REMARK 3 T TENSOR REMARK 3 T11: 0.2602 T22: 0.2234 REMARK 3 T33: 0.2389 T12: -0.0455 REMARK 3 T13: 0.0385 T23: 0.0280 REMARK 3 L TENSOR REMARK 3 L11: -0.0498 L22: 1.3808 REMARK 3 L33: 0.1862 L12: -0.4217 REMARK 3 L13: 0.0406 L23: 0.5652 REMARK 3 S TENSOR REMARK 3 S11: -0.0152 S12: 0.0409 S13: 0.0745 REMARK 3 S21: -0.3192 S22: 0.1018 S23: 0.0992 REMARK 3 S31: -0.1256 S32: -0.0909 S33: -0.0818 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: (CHAIN B AND RESID 2:42) REMARK 3 ORIGIN FOR THE GROUP (A): 46.1666 -64.5887 0.4794 REMARK 3 T TENSOR REMARK 3 T11: 0.2166 T22: 0.3197 REMARK 3 T33: 0.2482 T12: 0.0192 REMARK 3 T13: -0.0345 T23: 0.0164 REMARK 3 L TENSOR REMARK 3 L11: -1.0731 L22: 0.9011 REMARK 3 L33: 1.9632 L12: -1.2260 REMARK 3 L13: 0.0952 L23: -0.2531 REMARK 3 S TENSOR REMARK 3 S11: 0.1381 S12: 0.1231 S13: -0.1976 REMARK 3 S21: -0.0728 S22: -0.0895 S23: -0.2419 REMARK 3 S31: 0.1934 S32: 0.4533 S33: -0.0449 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: (CHAIN B AND RESID 43:65) REMARK 3 ORIGIN FOR THE GROUP (A): 36.6696 -62.8791 5.4094 REMARK 3 T TENSOR REMARK 3 T11: 0.2580 T22: 0.2089 REMARK 3 T33: 0.2447 T12: -0.0371 REMARK 3 T13: -0.0637 T23: 0.0279 REMARK 3 L TENSOR REMARK 3 L11: 0.9995 L22: -0.1178 REMARK 3 L33: 0.6356 L12: -0.2469 REMARK 3 L13: 0.2871 L23: 0.4708 REMARK 3 S TENSOR REMARK 3 S11: 0.1271 S12: -0.1340 S13: -0.1384 REMARK 3 S21: 0.0064 S22: -0.0459 S23: 0.0151 REMARK 3 S31: 0.0708 S32: -0.0438 S33: -0.0863 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: (CHAIN B AND RESID 66:79) REMARK 3 ORIGIN FOR THE GROUP (A): 38.4237 -65.3979 14.5070 REMARK 3 T TENSOR REMARK 3 T11: 0.2566 T22: 0.3316 REMARK 3 T33: 0.2633 T12: -0.1005 REMARK 3 T13: -0.0421 T23: 0.0394 REMARK 3 L TENSOR REMARK 3 L11: -0.2585 L22: 0.3220 REMARK 3 L33: 1.4365 L12: -0.1509 REMARK 3 L13: -0.0280 L23: -0.2361 REMARK 3 S TENSOR REMARK 3 S11: -0.0073 S12: -0.1239 S13: -0.2062 REMARK 3 S21: -0.0147 S22: 0.0925 S23: 0.0014 REMARK 3 S31: 0.1827 S32: -0.0884 S33: -0.0707 REMARK 3 TLS GROUP : 14 REMARK 3 SELECTION: (CHAIN B AND RESID 80:85) REMARK 3 ORIGIN FOR THE GROUP (A): 46.5584 -58.0831 17.7927 REMARK 3 T TENSOR REMARK 3 T11: 0.3254 T22: 0.4171 REMARK 3 T33: 0.2589 T12: -0.1012 REMARK 3 T13: -0.0543 T23: 0.0383 REMARK 3 L TENSOR REMARK 3 L11: 1.8823 L22: 2.3001 REMARK 3 L33: -0.1266 L12: 1.3604 REMARK 3 L13: 0.8637 L23: 0.6897 REMARK 3 S TENSOR REMARK 3 S11: 0.0982 S12: -0.4194 S13: -0.0942 REMARK 3 S21: 0.5991 S22: -0.3796 S23: -0.1199 REMARK 3 S31: -0.2153 S32: 0.0953 S33: 0.2181 REMARK 3 TLS GROUP : 15 REMARK 3 SELECTION: (CHAIN B AND RESID 86:117) REMARK 3 ORIGIN FOR THE GROUP (A): 43.4762 -52.9226 6.6253 REMARK 3 T TENSOR REMARK 3 T11: 0.2777 T22: 0.2614 REMARK 3 T33: 0.2457 T12: -0.0583 REMARK 3 T13: -0.0329 T23: 0.0208 REMARK 3 L TENSOR REMARK 3 L11: 0.5200 L22: 0.2917 REMARK 3 L33: -0.5205 L12: -0.1911 REMARK 3 L13: -0.0826 L23: 0.0156 REMARK 3 S TENSOR REMARK 3 S11: 0.1116 S12: -0.0029 S13: 0.0968 REMARK 3 S21: 0.0991 S22: -0.1596 S23: -0.0679 REMARK 3 S31: -0.0616 S32: 0.1064 S33: 0.0406 REMARK 3 TLS GROUP : 16 REMARK 3 SELECTION: (CHAIN B AND RESID 118:126) REMARK 3 ORIGIN FOR THE GROUP (A): 40.4610 -45.1229 5.4279 REMARK 3 T TENSOR REMARK 3 T11: 0.2856 T22: 0.2426 REMARK 3 T33: 0.3146 T12: -0.0506 REMARK 3 T13: 0.0079 T23: -0.0017 REMARK 3 L TENSOR REMARK 3 L11: 1.2396 L22: 0.5246 REMARK 3 L33: 2.7522 L12: -0.1461 REMARK 3 L13: -0.8699 L23: 1.2807 REMARK 3 S TENSOR REMARK 3 S11: 0.3963 S12: -0.1244 S13: 0.1039 REMARK 3 S21: 0.2497 S22: 0.0152 S23: -0.3716 REMARK 3 S31: -0.4564 S32: 0.0988 S33: -0.3067 REMARK 3 TLS GROUP : 17 REMARK 3 SELECTION: (CHAIN B AND RESID 127:144) REMARK 3 ORIGIN FOR THE GROUP (A): 39.6530 -58.3713 -5.2308 REMARK 3 T TENSOR REMARK 3 T11: 0.2588 T22: 0.2863 REMARK 3 T33: 0.2144 T12: -0.0021 REMARK 3 T13: -0.0395 T23: 0.0001 REMARK 3 L TENSOR REMARK 3 L11: 0.0177 L22: 0.7069 REMARK 3 L33: -0.4244 L12: -0.1115 REMARK 3 L13: 0.0408 L23: -0.3134 REMARK 3 S TENSOR REMARK 3 S11: 0.0999 S12: 0.0950 S13: -0.1189 REMARK 3 S21: -0.1897 S22: -0.1078 S23: -0.0834 REMARK 3 S31: -0.0115 S32: 0.1431 S33: 0.0219 REMARK 3 TLS GROUP : 18 REMARK 3 SELECTION: (CHAIN B AND RESID 145:165) REMARK 3 ORIGIN FOR THE GROUP (A): 32.7857 -64.4882 0.0579 REMARK 3 T TENSOR REMARK 3 T11: 0.2470 T22: 0.2226 REMARK 3 T33: 0.2651 T12: 0.0019 REMARK 3 T13: -0.0487 T23: -0.0178 REMARK 3 L TENSOR REMARK 3 L11: 1.2025 L22: 0.7805 REMARK 3 L33: 0.7863 L12: -0.3025 REMARK 3 L13: 0.5157 L23: -0.0862 REMARK 3 S TENSOR REMARK 3 S11: 0.2848 S12: 0.1081 S13: -0.1854 REMARK 3 S21: -0.0687 S22: -0.1908 S23: 0.1771 REMARK 3 S31: 0.0710 S32: 0.0240 S33: -0.0859 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2XGY COMPLIES WITH FORMAT V. 3.20, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 08-JUN-10. REMARK 100 THE PDBE ID CODE IS EBI-44183. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : NULL REMARK 200 DETECTOR MANUFACTURER : NULL REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 35238 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.80 REMARK 200 RESOLUTION RANGE LOW (A) : 25.00 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.0 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 96.8 REMARK 200 DATA REDUNDANCY : 21.2 REMARK 200 R MERGE (I) : 0.05 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 71.40 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.86 REMARK 200 COMPLETENESS FOR SHELL (%) : 94.1 REMARK 200 DATA REDUNDANCY IN SHELL : 11.8 REMARK 200 R MERGE FOR SHELL (I) : 0.60 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 4.40 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 45 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.07 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 16-26% PEG3350, 0.1M HEPES PH 7.5 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 61 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+5/6 REMARK 290 6555 X-Y,X,Z+1/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 16.55167 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 33.10333 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 24.82750 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 41.37917 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 8.27583 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1890 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 13280 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -5.1 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 LEU A 4 REMARK 465 ARG A 5 REMARK 465 GLY A 6 REMARK 465 GLY A 7 REMARK 465 ARG A 8 REMARK 465 GLN A 9 REMARK 465 PHE A 62 REMARK 465 ALA A 63 REMARK 465 THR A 138 REMARK 465 ILE A 139 REMARK 465 SER A 140 REMARK 465 PRO A 141 REMARK 465 LEU A 142 REMARK 465 GLU A 143 REMARK 465 HIS A 144 REMARK 465 HIS A 145 REMARK 465 HIS A 146 REMARK 465 HIS A 147 REMARK 465 HIS A 148 REMARK 465 HIS A 149 REMARK 465 GLY B -7 REMARK 465 PRO B -6 REMARK 465 LEU B -5 REMARK 465 GLY B -4 REMARK 465 SER B -3 REMARK 465 PRO B -2 REMARK 465 GLU B -1 REMARK 465 PHE B 0 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 10 CG CD OE1 OE2 REMARK 470 GLU A 110 CG CD OE1 OE2 REMARK 470 ARG A 137 CG CD NE CZ NH1 NH2 REMARK 470 MET B 1 CG SD CE REMARK 470 LYS B 155 CD CE NZ REMARK 470 GLU B 165 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 90 -8.52 85.65 REMARK 500 PHE B 60 -77.66 -131.62 REMARK 500 LYS B 133 -74.87 -101.96 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A1138 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL B1166 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1VBS RELATED DB: PDB REMARK 900 STRUCTURE OF CYCLOPHILIN COMPLEXED WITH (D) REMARK 900 ALA CONTAINING TETRAPEPTIDE REMARK 900 RELATED ID: 1OCA RELATED DB: PDB REMARK 900 HUMAN CYCLOPHILIN A, UNLIGATED, NMR, 20 REMARK 900 STRUCTURES REMARK 900 RELATED ID: 1MF8 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF HUMAN CALCINEURIN REMARK 900 COMPLEXED WITHCYCLOSPORIN A AND HUMAN REMARK 900 CYCLOPHILIN REMARK 900 RELATED ID: 2CYH RELATED DB: PDB REMARK 900 CYCLOPHILIN A COMPLEXED WITH DIPEPTIDE ALA- REMARK 900 PRO REMARK 900 RELATED ID: 1CWB RELATED DB: PDB REMARK 900 MOL_ID: 1; MOLECULE: CYCLOPHILIN A; CHAIN: A REMARK 900 ; ENGINEERED: YES; MOL_ID: 2; MOLECULE: [4 REMARK 900 -[(E)-2-BUTENYL]-4,4,N-TRIMETHYL-L- REMARK 900 THREONINE]1- CYCLOSPORIN; CHAIN: C; ENGINEERED REMARK 900 : YES REMARK 900 RELATED ID: 1VBT RELATED DB: PDB REMARK 900 STRUCTURE OF CYCLOPHILIN COMPLEXED WITH SULFUR REMARK 900 -SUBSTITUTED TETRAPEPTIDE AAPF REMARK 900 RELATED ID: 1CWL RELATED DB: PDB REMARK 900 HUMAN CYCLOPHILIN A COMPLEXED WITH 4 4- REMARK 900 HYDROXY-MELEU CYCLOSPORIN REMARK 900 RELATED ID: 1M9E RELATED DB: PDB REMARK 900 X-RAY CRYSTAL STRUCTURE OF CYCLOPHILIN A/ REMARK 900 HIV-1 CA N-TERMINAL DOMAIN (1-146) M- REMARK 900 TYPE H87A COMPLEX. REMARK 900 RELATED ID: 1CWC RELATED DB: PDB REMARK 900 MOL_ID: 1; MOLECULE: CYCLOPHILIN A; CHAIN: A REMARK 900 ; ENGINEERED: YES; MOL_ID: 2; MOLECULE: [4, REMARK 900 N-DIMETHYLNORLEUCINE]4-CYCLOSPORIN; CHAIN: C REMARK 900 ; ENGINEERED: YES REMARK 900 RELATED ID: 1CWO RELATED DB: PDB REMARK 900 HUMAN CYCLOPHILIN A COMPLEXED WITH THR2, REMARK 900 LEU5, D-HIV8, LEU10 CYCLOSPORIN REMARK 900 RELATED ID: 1CWI RELATED DB: PDB REMARK 900 HUMAN CYCLOPHILIN A COMPLEXED WITH 2-VAL 3 REMARK 900 -(N-METHYL)-D-ALANINE CYCLOSPORIN REMARK 900 RELATED ID: 2X2C RELATED DB: PDB REMARK 900 ACETYL-CYPA:CYCLOSPORINE COMPLEX REMARK 900 RELATED ID: 1RMH RELATED DB: PDB REMARK 900 RECOMBINANT CYCLOPHILIN A FROM HUMAN T CELL REMARK 900 RELATED ID: 1CWJ RELATED DB: PDB REMARK 900 HUMAN CYCLOPHILIN A COMPLEXED WITH 2-VAL 3 REMARK 900 -S-METHYL-SARCOSINE CYCLOSPORIN REMARK 900 RELATED ID: 2RMB RELATED DB: PDB REMARK 900 CYCLOPHILIN A COMPLEXED WITH DIMETHYL- REMARK 900 CYCLOSPORIN A REMARK 900 RELATED ID: 1M9C RELATED DB: PDB REMARK 900 X-RAY CRYSTAL STRUCTURE OF CYCLOPHILIN A/ REMARK 900 HIV-1 CA N-TERMINAL DOMAIN (1-146) M- REMARK 900 TYPE COMPLEX. REMARK 900 RELATED ID: 1CWA RELATED DB: PDB REMARK 900 MOL_ID: 1; MOLECULE: CYCLOPHILIN A; CHAIN: A REMARK 900 ; ENGINEERED: YES; MOL_ID: 2; MOLECULE: REMARK 900 CYCLOSPORIN A; CHAIN: C; ENGINEERED: YES REMARK 900 RELATED ID: 1CWF RELATED DB: PDB REMARK 900 HUMAN CYCLOPHILIN A COMPLEXED WITH 2-VAL REMARK 900 CYCLOSPORIN REMARK 900 RELATED ID: 3CYH RELATED DB: PDB REMARK 900 CYCLOPHILIN A COMPLEXED WITH DIPEPTIDE SER- REMARK 900 PRO REMARK 900 RELATED ID: 1M9Y RELATED DB: PDB REMARK 900 X-RAY CRYSTAL STRUCTURE OF CYCLOPHILIN A/ REMARK 900 HIV-1 CA N-TERMINAL DOMAIN (1-146) M- REMARK 900 TYPE H87A,G89A COMPLEX. REMARK 900 RELATED ID: 4CYH RELATED DB: PDB REMARK 900 CYCLOPHILIN A COMPLEXED WITH DIPEPTIDE HIS- REMARK 900 PRO REMARK 900 RELATED ID: 1M9F RELATED DB: PDB REMARK 900 X-RAY CRYSTAL STRUCTURE OF CYCLOPHILIN A/ REMARK 900 HIV-1 CA N-TERMINAL DOMAIN (1-146) M- REMARK 900 TYPE H87A,A88M COMPLEX. REMARK 900 RELATED ID: 1CWH RELATED DB: PDB REMARK 900 HUMAN CYCLOPHILIN A COMPLEXED WITH 3-D-SER REMARK 900 CYCLOSPORIN REMARK 900 RELATED ID: 1BCK RELATED DB: PDB REMARK 900 HUMAN CYCLOPHILIN A COMPLEXED WITH 2-THR REMARK 900 CYCLOSPORIN REMARK 900 RELATED ID: 1W8V RELATED DB: PDB REMARK 900 ENZYMATIC AND STRUCTURAL CHARACTERIZATION OF REMARK 900 NON PEPTIDE LIGAND CYCLOPHILIN COMPLEXES REMARK 900 RELATED ID: 1AWR RELATED DB: PDB REMARK 900 CYPA COMPLEXED WITH HAGPIA REMARK 900 RELATED ID: 1NMK RELATED DB: PDB REMARK 900 THE SANGLIFEHRIN-CYCLOPHILIN INTERACTION: REMARK 900 DEGRADATION WORK,SYNTHETIC MACROCYCLIC ANALOGUES REMARK 900 , X-RAY CRYSTAL STRUCTUREAND BINDING DATA REMARK 900 RELATED ID: 1MIK RELATED DB: PDB REMARK 900 MOL_ID: 1; MOLECULE: CYCLOPHILIN A; CHAIN: A REMARK 900 ; ENGINEERED: YES; MOL_ID: 2; MOLECULE: [(5- REMARK 900 HYDROXY)NORVALINE2]-CYCLOSPORIN; CHAIN: B; REMARK 900 ENGINEERED: YES REMARK 900 RELATED ID: 1AWV RELATED DB: PDB REMARK 900 CYPA COMPLEXED WITH HVGPIA REMARK 900 RELATED ID: 1M9D RELATED DB: PDB REMARK 900 X-RAY CRYSTAL STRUCTURE OF CYCLOPHILIN A/ REMARK 900 HIV-1 CA N-TERMINAL DOMAIN (1-146) O- REMARK 900 TYPE CHIMERA COMPLEX. REMARK 900 RELATED ID: 1AWT RELATED DB: PDB REMARK 900 SECYPA COMPLEXED WITH HAGPIA REMARK 900 RELATED ID: 2CPL RELATED DB: PDB REMARK 900 CYCLOPHILIN A REMARK 900 RELATED ID: 1FGL RELATED DB: PDB REMARK 900 CYCLOPHILIN A COMPLEXED WITH A FRAGMENT OF REMARK 900 HIV-1 GAGPROTEIN REMARK 900 RELATED ID: 2X2A RELATED DB: PDB REMARK 900 FREE ACETYL-CYPA TRIGONAL FORM REMARK 900 RELATED ID: 1M9X RELATED DB: PDB REMARK 900 X-RAY CRYSTAL STRUCTURE OF CYCLOPHILIN A/ REMARK 900 HIV-1 CA N-TERMINAL DOMAIN (1-146) M- REMARK 900 TYPE H87A,A88M,G89A COMPLEX. REMARK 900 RELATED ID: 1CWK RELATED DB: PDB REMARK 900 HUMAN CYCLOPHILIN A COMPLEXED WITH 1-(6,7 REMARK 900 -DIHYDRO)MEBMT 2-VAL 3-D-(2-S-METHYL) REMARK 900 SARCOSINE CYCLOSPORIN REMARK 900 RELATED ID: 1M63 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF CALCINEURIN-CYCLOPHILIN- REMARK 900 CYCLOSPORINSHOWS COMMON BUT DISTINCT RECOGNITION REMARK 900 OF IMMUNOPHILIN-DRUGCOMPLEXES REMARK 900 RELATED ID: 5CYH RELATED DB: PDB REMARK 900 CYCLOPHILIN A COMPLEXED WITH DIPEPTIDE GLY- REMARK 900 PRO REMARK 900 RELATED ID: 2X2D RELATED DB: PDB REMARK 900 ACETYL-CYPA:HIV-1 N-TERM CAPSID DOMAIN REMARK 900 COMPLEX REMARK 900 RELATED ID: 1AK4 RELATED DB: PDB REMARK 900 HUMAN CYCLOPHILIN A BOUND TO THE AMINO- REMARK 900 TERMINAL DOMAIN OF HIV-1 CAPSID REMARK 900 RELATED ID: 1AWS RELATED DB: PDB REMARK 900 SECYPA COMPLEXED WITH HAGPIA (PSEUDO-SYMMETRIC REMARK 900 MONOMER) REMARK 900 RELATED ID: 2ALF RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF HUMAN CYPA MUTANT K131A REMARK 900 RELATED ID: 3CYS RELATED DB: PDB REMARK 900 CYCLOPHILIN A COMPLEXED WITH CYCLOSPORIN A ( REMARK 900 NMR, 22 STRUCTURES) REMARK 900 RELATED ID: 1W8L RELATED DB: PDB REMARK 900 ENZYMATIC AND STRUCTURAL CHARACTERIZATION OF REMARK 900 NON PEPTIDE LIGAND CYCLOPHILIN COMPLEXES REMARK 900 RELATED ID: 2X25 RELATED DB: PDB REMARK 900 FREE ACETYL-CYPA ORTHORHOMBIC FORM REMARK 900 RELATED ID: 1W8M RELATED DB: PDB REMARK 900 ENZYMATIC AND STRUCTURAL CHARACTERISATION OF REMARK 900 NON PEPTIDE LIGAND CYCLOPHILIN COMPLEXES REMARK 900 RELATED ID: 1AWU RELATED DB: PDB REMARK 900 CYPA COMPLEXED WITH HVGPIA (PSEUDO-SYMMETRIC REMARK 900 MONOMER) REMARK 900 RELATED ID: 2RMA RELATED DB: PDB REMARK 900 CYCLOPHILIN A COMPLEXED WITH CYCLOSPORIN A REMARK 900 RELATED ID: 1CWM RELATED DB: PDB REMARK 900 HUMAN CYCLOPHILIN A COMPLEXED WITH 4 MEILE REMARK 900 CYCLOSPORIN REMARK 900 RELATED ID: 1AWQ RELATED DB: PDB REMARK 900 CYPA COMPLEXED WITH HAGPIA (PSEUDO-SYMMETRIC REMARK 900 MONOMER) REMARK 900 RELATED ID: 2XGU RELATED DB: PDB REMARK 900 STRUCTURE OF THE N-TERMINAL DOMAIN OF REMARK 900 CAPSID PROTEIN FROM RABBIT ENDOGENOUS REMARK 900 LENTIVIRUS (RELIK) REMARK 999 REMARK 999 SEQUENCE REMARK 999 RESIDUES 141-149 ARE AN EXPRESSION TAG. DBREF 2XGY A 1 140 PDB 2XGY 2XGY 1 140 DBREF 2XGY A 141 149 PDB 2XGY 2XGY 141 149 DBREF 2XGY B 1 165 UNP P62937 PPIA_HUMAN 1 165 SEQADV 2XGY GLY B -7 UNP P62937 EXPRESSION TAG SEQADV 2XGY PRO B -6 UNP P62937 EXPRESSION TAG SEQADV 2XGY LEU B -5 UNP P62937 EXPRESSION TAG SEQADV 2XGY GLY B -4 UNP P62937 EXPRESSION TAG SEQADV 2XGY SER B -3 UNP P62937 EXPRESSION TAG SEQADV 2XGY PRO B -2 UNP P62937 EXPRESSION TAG SEQADV 2XGY GLU B -1 UNP P62937 EXPRESSION TAG SEQADV 2XGY PHE B 0 UNP P62937 EXPRESSION TAG SEQRES 1 A 149 PRO ILE MET LEU ARG GLY GLY ARG GLN GLU TYR GLU PRO SEQRES 2 A 149 VAL GLY PRO GLY LEU ILE ALA ALA TRP LEU LYS GLN VAL SEQRES 3 A 149 GLN GLU HIS GLY LEU THR HIS PRO ALA THR ILE THR TYR SEQRES 4 A 149 PHE GLY VAL ILE SER ILE ASN PHE THR SER VAL ASP ILE SEQRES 5 A 149 ASN MET LEU LEU ASN VAL THR PRO GLY PHE ALA ALA GLU SEQRES 6 A 149 LYS GLN LEU VAL ILE ASP LYS ILE LYS GLU LYS ALA ILE SEQRES 7 A 149 ALA TRP ASP GLU MET HIS PRO PRO PRO PRO ALA ASP ALA SEQRES 8 A 149 ALA GLY PRO VAL PRO LEU THR SER ASP GLN ILE ARG GLY SEQRES 9 A 149 ILE GLY LEU SER PRO GLU GLU ALA ALA GLY PRO ARG PHE SEQRES 10 A 149 ALA ASP ALA ARG THR LEU TYR ARG THR TRP VAL LEU GLU SEQRES 11 A 149 ALA LEU GLN GLU CYS GLN ARG THR ILE SER PRO LEU GLU SEQRES 12 A 149 HIS HIS HIS HIS HIS HIS SEQRES 1 B 173 GLY PRO LEU GLY SER PRO GLU PHE MET VAL ASN PRO THR SEQRES 2 B 173 VAL PHE PHE ASP ILE ALA VAL ASP GLY GLU PRO LEU GLY SEQRES 3 B 173 ARG VAL SER PHE GLU LEU PHE ALA ASP LYS VAL PRO LYS SEQRES 4 B 173 THR ALA GLU ASN PHE ARG ALA LEU SER THR GLY GLU LYS SEQRES 5 B 173 GLY PHE GLY TYR LYS GLY SER CYS PHE HIS ARG ILE ILE SEQRES 6 B 173 PRO GLY PHE MET CYS GLN GLY GLY ASP PHE THR ARG HIS SEQRES 7 B 173 ASN GLY THR GLY GLY LYS SER ILE TYR GLY GLU LYS PHE SEQRES 8 B 173 GLU ASP GLU ASN PHE ILE LEU LYS HIS THR GLY PRO GLY SEQRES 9 B 173 ILE LEU SER MET ALA ASN ALA GLY PRO ASN THR ASN GLY SEQRES 10 B 173 SER GLN PHE PHE ILE CYS THR ALA LYS THR GLU TRP LEU SEQRES 11 B 173 ASP GLY LYS HIS VAL VAL PHE GLY LYS VAL LYS GLU GLY SEQRES 12 B 173 MET ASN ILE VAL GLU ALA MET GLU ARG PHE GLY SER ARG SEQRES 13 B 173 ASN GLY LYS THR SER LYS LYS ILE THR ILE ALA ASP CYS SEQRES 14 B 173 GLY GLN LEU GLU HET GOL A1138 6 HET GOL B1166 6 HETNAM GOL GLYCEROL FORMUL 3 GOL 2(C3 H8 O3) FORMUL 4 HOH *367(H2 O) HELIX 1 1 GLY A 15 GLY A 30 1 16 HELIX 2 2 HIS A 33 SER A 44 1 12 HELIX 3 3 THR A 48 THR A 59 1 12 HELIX 4 4 ALA A 64 HIS A 84 1 21 HELIX 5 5 THR A 98 ARG A 103 1 6 HELIX 6 6 SER A 108 ALA A 113 1 6 HELIX 7 7 GLY A 114 ARG A 116 5 3 HELIX 8 8 PHE A 117 CYS A 135 1 19 HELIX 9 9 VAL B 29 GLY B 42 1 14 HELIX 10 10 THR B 119 ASP B 123 5 5 HELIX 11 11 GLY B 135 ARG B 144 1 10 SHEET 1 BA 8 ARG B 55 ILE B 57 0 SHEET 2 BA 8 MET B 61 GLY B 64 -1 O MET B 61 N ILE B 57 SHEET 3 BA 8 PHE B 112 CYS B 115 -1 O PHE B 112 N GLY B 64 SHEET 4 BA 8 ILE B 97 MET B 100 -1 O ILE B 97 N CYS B 115 SHEET 5 BA 8 VAL B 128 VAL B 132 -1 N PHE B 129 O LEU B 98 SHEET 6 BA 8 GLU B 15 LEU B 24 -1 O GLU B 23 N LYS B 131 SHEET 7 BA 8 THR B 5 VAL B 12 -1 O VAL B 6 N PHE B 22 SHEET 8 BA 8 ILE B 156 LEU B 164 -1 O THR B 157 N ALA B 11 CISPEP 1 GLY A 93 PRO A 94 0 18.86 SITE 1 AC1 7 ASN A 53 ASN A 57 ILE A 70 ILE A 73 SITE 2 AC1 7 ARG A 103 TYR A 124 HOH A2136 SITE 1 AC2 8 HIS A 84 ASP A 90 HOH A2100 GLY B 59 SITE 2 AC2 8 PHE B 60 TRP B 121 HOH B2229 HOH B2230 CRYST1 117.158 117.158 49.655 90.00 90.00 120.00 P 61 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008535 0.004928 0.000000 0.00000 SCALE2 0.000000 0.009856 0.000000 0.00000 SCALE3 0.000000 0.000000 0.020139 0.00000