data_2XLJ # _entry.id 2XLJ # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.383 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2XLJ pdb_00002xlj 10.2210/pdb2xlj/pdb PDBE EBI-44702 ? ? WWPDB D_1290044702 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.content_type _pdbx_database_related.details PDB 2XLI unspecified 'CRYSTAL STRUCTURE OF THE CSY4-CRRNA COMPLEX, MONOCLINIC FORM' PDB 2XLK unspecified 'CRYSTAL STRUCTURE OF THE CSY4-CRRNA COMPLEX, ORTHORHOMBIC FORM' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 2XLJ _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.SG_entry . _pdbx_database_status.recvd_initial_deposition_date 2010-07-20 _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Haurwitz, R.E.' 1 'Jinek, M.' 2 'Wiedenheft, B.' 3 'Zhou, K.' 4 'Doudna, J.A.' 5 # _citation.id primary _citation.title 'Sequence- and Structure-Specific RNA Processing by a Crispr Endonuclease.' _citation.journal_abbrev Science _citation.journal_volume 329 _citation.page_first 1355 _citation.page_last ? _citation.year 2010 _citation.journal_id_ASTM SCIEAS _citation.country US _citation.journal_id_ISSN 0036-8075 _citation.journal_id_CSD 0038 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 20829488 _citation.pdbx_database_id_DOI 10.1126/SCIENCE.1192272 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Haurwitz, R.E.' 1 ? primary 'Jinek, M.' 2 ? primary 'Wiedenheft, B.' 3 ? primary 'Zhou, K.' 4 ? primary 'Doudna, J.A.' 5 ? # _cell.entry_id 2XLJ _cell.length_a 39.250 _cell.length_b 39.250 _cell.length_c 297.370 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2XLJ _symmetry.space_group_name_H-M 'P 61' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 169 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'CSY4 ENDORIBONUCLEASE' 21866.002 1 ? YES ? ? 2 polymer syn "5'-R(*CP*UP*GP*CP*CP*GP*UP*AP*UP*AP*GP*GP*CP*A*DG*C)-3'" 5097.095 1 ? ? ? '2-DEOXY MODIFICATION AT G20' 3 water nat water 18.015 5 ? ? ? ? # _entity_name_com.entity_id 2 _entity_name_com.name 'PA14 CRRNA HAIRPIN' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;GSFTMDHYLDIRLRPDPEFPPAQLMCVLFGKLHQALVAQGGDRIGVSFPDLDESRSRLGERLRIHASADDLRALLARPWL EGLRDHLQFGEPAVVPHPTPYRQVSRVQAKSNPERLRRRLMRRHDLSEEEARKRIPDTVARTLDLPFVTLRSQSTGQHFR LFIRHGPLQVTAEEGGFTCYGLSKGGFVPWF ; ;GSFTMDHYLDIRLRPDPEFPPAQLMCVLFGKLHQALVAQGGDRIGVSFPDLDESRSRLGERLRIHASADDLRALLARPWL EGLRDHLQFGEPAVVPHPTPYRQVSRVQAKSNPERLRRRLMRRHDLSEEEARKRIPDTVARTLDLPFVTLRSQSTGQHFR LFIRHGPLQVTAEEGGFTCYGLSKGGFVPWF ; A ? 2 polyribonucleotide no no 'CUGCCGUAUAGGCA(DG)C' CUGCCGUAUAGGCAGC B ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 SER n 1 3 PHE n 1 4 THR n 1 5 MET n 1 6 ASP n 1 7 HIS n 1 8 TYR n 1 9 LEU n 1 10 ASP n 1 11 ILE n 1 12 ARG n 1 13 LEU n 1 14 ARG n 1 15 PRO n 1 16 ASP n 1 17 PRO n 1 18 GLU n 1 19 PHE n 1 20 PRO n 1 21 PRO n 1 22 ALA n 1 23 GLN n 1 24 LEU n 1 25 MET n 1 26 CYS n 1 27 VAL n 1 28 LEU n 1 29 PHE n 1 30 GLY n 1 31 LYS n 1 32 LEU n 1 33 HIS n 1 34 GLN n 1 35 ALA n 1 36 LEU n 1 37 VAL n 1 38 ALA n 1 39 GLN n 1 40 GLY n 1 41 GLY n 1 42 ASP n 1 43 ARG n 1 44 ILE n 1 45 GLY n 1 46 VAL n 1 47 SER n 1 48 PHE n 1 49 PRO n 1 50 ASP n 1 51 LEU n 1 52 ASP n 1 53 GLU n 1 54 SER n 1 55 ARG n 1 56 SER n 1 57 ARG n 1 58 LEU n 1 59 GLY n 1 60 GLU n 1 61 ARG n 1 62 LEU n 1 63 ARG n 1 64 ILE n 1 65 HIS n 1 66 ALA n 1 67 SER n 1 68 ALA n 1 69 ASP n 1 70 ASP n 1 71 LEU n 1 72 ARG n 1 73 ALA n 1 74 LEU n 1 75 LEU n 1 76 ALA n 1 77 ARG n 1 78 PRO n 1 79 TRP n 1 80 LEU n 1 81 GLU n 1 82 GLY n 1 83 LEU n 1 84 ARG n 1 85 ASP n 1 86 HIS n 1 87 LEU n 1 88 GLN n 1 89 PHE n 1 90 GLY n 1 91 GLU n 1 92 PRO n 1 93 ALA n 1 94 VAL n 1 95 VAL n 1 96 PRO n 1 97 HIS n 1 98 PRO n 1 99 THR n 1 100 PRO n 1 101 TYR n 1 102 ARG n 1 103 GLN n 1 104 VAL n 1 105 SER n 1 106 ARG n 1 107 VAL n 1 108 GLN n 1 109 ALA n 1 110 LYS n 1 111 SER n 1 112 ASN n 1 113 PRO n 1 114 GLU n 1 115 ARG n 1 116 LEU n 1 117 ARG n 1 118 ARG n 1 119 ARG n 1 120 LEU n 1 121 MET n 1 122 ARG n 1 123 ARG n 1 124 HIS n 1 125 ASP n 1 126 LEU n 1 127 SER n 1 128 GLU n 1 129 GLU n 1 130 GLU n 1 131 ALA n 1 132 ARG n 1 133 LYS n 1 134 ARG n 1 135 ILE n 1 136 PRO n 1 137 ASP n 1 138 THR n 1 139 VAL n 1 140 ALA n 1 141 ARG n 1 142 THR n 1 143 LEU n 1 144 ASP n 1 145 LEU n 1 146 PRO n 1 147 PHE n 1 148 VAL n 1 149 THR n 1 150 LEU n 1 151 ARG n 1 152 SER n 1 153 GLN n 1 154 SER n 1 155 THR n 1 156 GLY n 1 157 GLN n 1 158 HIS n 1 159 PHE n 1 160 ARG n 1 161 LEU n 1 162 PHE n 1 163 ILE n 1 164 ARG n 1 165 HIS n 1 166 GLY n 1 167 PRO n 1 168 LEU n 1 169 GLN n 1 170 VAL n 1 171 THR n 1 172 ALA n 1 173 GLU n 1 174 GLU n 1 175 GLY n 1 176 GLY n 1 177 PHE n 1 178 THR n 1 179 CYS n 1 180 TYR n 1 181 GLY n 1 182 LEU n 1 183 SER n 1 184 LYS n 1 185 GLY n 1 186 GLY n 1 187 PHE n 1 188 VAL n 1 189 PRO n 1 190 TRP n 1 191 PHE n 2 1 C n 2 2 U n 2 3 G n 2 4 C n 2 5 C n 2 6 G n 2 7 U n 2 8 A n 2 9 U n 2 10 A n 2 11 G n 2 12 G n 2 13 C n 2 14 A n 2 15 DG n 2 16 C n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain UCBPP-PA14 _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'PSEUDOMONAS AERUGINOSA' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 208963 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'ESCHERICHIA COLI' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 511693 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain BL21 _entity_src_gen.pdbx_host_org_variant 'ROSETTA 2 (DE3)' _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name PHMGWA _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _pdbx_entity_src_syn.entity_id 2 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num ? _pdbx_entity_src_syn.pdbx_end_seq_num ? _pdbx_entity_src_syn.organism_scientific 'PSEUDOMONAS AERUGINOSA' _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id 208963 _pdbx_entity_src_syn.details ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform 1 UNP A3KUJ4_PSEAE 1 ? ? A3KUJ4 ? 2 PDB 2XLJ 2 ? ? 2XLJ ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 2XLJ A 5 ? 191 ? A3KUJ4 1 ? 187 ? 1 187 2 2 2XLJ B 1 ? 16 ? 2XLJ 6 ? 21 ? 6 21 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 2XLJ GLY A 1 ? UNP A3KUJ4 ? ? 'expression tag' -3 1 1 2XLJ SER A 2 ? UNP A3KUJ4 ? ? 'expression tag' -2 2 1 2XLJ PHE A 3 ? UNP A3KUJ4 ? ? 'expression tag' -1 3 1 2XLJ THR A 4 ? UNP A3KUJ4 ? ? 'expression tag' 0 4 1 2XLJ CYS A 26 ? UNP A3KUJ4 SER 22 'engineered mutation' 22 5 1 2XLJ VAL A 170 ? UNP A3KUJ4 ALA 166 conflict 166 6 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight A 'RNA linking' y "ADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 C 'RNA linking' y "CYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O8 P' 323.197 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 G 'RNA linking' y "GUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O8 P' 363.221 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 U 'RNA linking' y "URIDINE-5'-MONOPHOSPHATE" ? 'C9 H13 N2 O9 P' 324.181 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 2XLJ _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.5 _exptl_crystal.density_percent_sol 50.7 _exptl_crystal.description NONE # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method ? _exptl_crystal_grow.temp ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 4.6 _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details '150 MM SODIUM ACETATE PH 4.6, 17% (W/V) PEG 4000' # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC CCD' _diffrn_detector.pdbx_collection_date 2010-04-02 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.11159 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'ALS BEAMLINE 8.3.1' _diffrn_source.pdbx_synchrotron_site ALS _diffrn_source.pdbx_synchrotron_beamline 8.3.1 _diffrn_source.pdbx_wavelength 1.11159 _diffrn_source.pdbx_wavelength_list ? # _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.entry_id 2XLJ _reflns.observed_criterion_sigma_I 2.0 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 19.60 _reflns.d_resolution_high 2.60 _reflns.number_obs 7798 _reflns.number_all ? _reflns.percent_possible_obs 99.4 _reflns.pdbx_Rmerge_I_obs 0.03 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 29.80 _reflns.B_iso_Wilson_estimate 61.60 _reflns.pdbx_redundancy 6.1 # _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_ordinal 1 _reflns_shell.d_res_high 2.60 _reflns_shell.d_res_low 2.70 _reflns_shell.percent_possible_all 98.5 _reflns_shell.Rmerge_I_obs 0.31 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 3.80 _reflns_shell.pdbx_redundancy 5.4 # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 2XLJ _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 7798 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 2.00 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 19.625 _refine.ls_d_res_high 2.60 _refine.ls_percent_reflns_obs 98.97 _refine.ls_R_factor_obs 0.2497 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.2485 _refine.ls_R_factor_R_free 0.2735 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.0 _refine.ls_number_reflns_R_free 388 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean 102.4 _refine.aniso_B[1][1] 23.4079 _refine.aniso_B[2][2] 23.4079 _refine.aniso_B[3][3] -46.8159 _refine.aniso_B[1][2] 0.0000 _refine.aniso_B[1][3] -0.0000 _refine.aniso_B[2][3] 0.0000 _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_ksol 0.345 _refine.solvent_model_param_bsol 70.886 _refine.pdbx_solvent_vdw_probe_radii 1.11 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.90 _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model 'PDB ENTRY 2XLI' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML 0.54 _refine.pdbx_overall_phase_error 36.38 _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1417 _refine_hist.pdbx_number_atoms_nucleic_acid 321 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 5 _refine_hist.number_atoms_total 1743 _refine_hist.d_res_high 2.60 _refine_hist.d_res_low 19.625 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function f_bond_d 0.003 ? ? 1811 'X-RAY DIFFRACTION' ? f_angle_d 0.653 ? ? 2522 'X-RAY DIFFRACTION' ? f_dihedral_angle_d 16.725 ? ? 721 'X-RAY DIFFRACTION' ? f_chiral_restr 0.038 ? ? 280 'X-RAY DIFFRACTION' ? f_plane_restr 0.003 ? ? 278 'X-RAY DIFFRACTION' ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_all _refine_ls_shell.R_factor_all 'X-RAY DIFFRACTION' . 2.6014 2.9767 2452 0.3353 99.00 0.3830 . . 128 . . 'X-RAY DIFFRACTION' . 2.9767 3.7461 2471 0.2319 99.00 0.2479 . . 129 . . 'X-RAY DIFFRACTION' . 3.7461 19.6255 2487 0.2329 99.00 0.2505 . . 131 . . # _struct.entry_id 2XLJ _struct.title 'Crystal structure of the Csy4-crRNA complex, hexagonal form' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2XLJ _struct_keywords.pdbx_keywords HYDROLASE/RNA _struct_keywords.text 'HYDROLASE-RNA COMPLEX, ENDORIBONUCLEASE, CRISPR' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 3 ? # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 PRO A 20 ? GLY A 40 ? PRO A 16 GLY A 36 1 ? 21 HELX_P HELX_P2 2 SER A 67 ? LEU A 75 ? SER A 63 LEU A 71 1 ? 9 HELX_P HELX_P3 3 ASN A 112 ? ARG A 123 ? ASN A 108 ARG A 119 1 ? 12 HELX_P HELX_P4 4 GLU A 128 ? ARG A 134 ? GLU A 124 ARG A 130 1 ? 7 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? B A 14 "O3'" ? ? ? 1_555 B DG 15 P ? ? B A 19 B DG 20 1_555 ? ? ? ? ? ? ? 1.597 ? ? covale2 covale both ? B DG 15 "O3'" ? ? ? 1_555 B C 16 P ? ? B DG 20 B C 21 1_555 ? ? ? ? ? ? ? 1.599 ? ? hydrog1 hydrog ? ? B C 1 N3 ? ? ? 1_555 B DG 15 N1 ? ? B C 6 B DG 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? B C 1 N4 ? ? ? 1_555 B DG 15 O6 ? ? B C 6 B DG 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? B C 1 O2 ? ? ? 1_555 B DG 15 N2 ? ? B C 6 B DG 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? B U 2 N3 ? ? ? 1_555 B A 14 N1 ? ? B U 7 B A 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? B U 2 O4 ? ? ? 1_555 B A 14 N6 ? ? B U 7 B A 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? B G 3 N1 ? ? ? 1_555 B C 13 N3 ? ? B G 8 B C 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? B G 3 N2 ? ? ? 1_555 B C 13 O2 ? ? B G 8 B C 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? B G 3 O6 ? ? ? 1_555 B C 13 N4 ? ? B G 8 B C 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? B C 4 N3 ? ? ? 1_555 B G 12 N1 ? ? B C 9 B G 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? B C 4 N4 ? ? ? 1_555 B G 12 O6 ? ? B C 9 B G 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? B C 4 O2 ? ? ? 1_555 B G 12 N2 ? ? B C 9 B G 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? B C 5 N3 ? ? ? 1_555 B G 11 N1 ? ? B C 10 B G 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? B C 5 N4 ? ? ? 1_555 B G 11 O6 ? ? B C 10 B G 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? B C 5 O2 ? ? ? 1_555 B G 11 N2 ? ? B C 10 B G 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? B G 6 N2 ? ? ? 1_555 B A 10 N7 ? ? B G 11 B A 15 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? ? hydrog16 hydrog ? ? B G 6 N3 ? ? ? 1_555 B A 10 N6 ? ? B G 11 B A 15 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? hydrog ? ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id HIS _struct_mon_prot_cis.label_seq_id 97 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id HIS _struct_mon_prot_cis.auth_seq_id 93 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 98 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 94 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle 0.75 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA ? 4 ? AB ? 4 ? AC ? 2 ? AD ? 2 ? AE ? 3 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA 1 2 ? anti-parallel AA 2 3 ? anti-parallel AA 3 4 ? anti-parallel AB 1 2 ? anti-parallel AB 2 3 ? anti-parallel AB 3 4 ? anti-parallel AC 1 2 ? anti-parallel AD 1 2 ? anti-parallel AE 1 2 ? anti-parallel AE 2 3 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA 1 GLY A 45 ? SER A 47 ? GLY A 41 SER A 43 AA 2 ARG A 61 ? ALA A 66 ? ARG A 57 ALA A 62 AA 3 HIS A 7 ? LEU A 13 ? HIS A 3 LEU A 9 AA 4 LEU A 87 ? PHE A 89 ? LEU A 83 PHE A 85 AB 1 GLY A 45 ? SER A 47 ? GLY A 41 SER A 43 AB 2 ARG A 61 ? ALA A 66 ? ARG A 57 ALA A 62 AB 3 HIS A 7 ? LEU A 13 ? HIS A 3 LEU A 9 AB 4 ALA A 93 ? VAL A 94 ? ALA A 89 VAL A 90 AC 1 LEU A 87 ? PHE A 89 ? LEU A 83 PHE A 85 AC 2 HIS A 7 ? LEU A 13 ? HIS A 3 LEU A 9 AD 1 TYR A 101 ? ARG A 102 ? TYR A 97 ARG A 98 AD 2 VAL A 188 ? PRO A 189 ? VAL A 184 PRO A 185 AE 1 VAL A 104 ? VAL A 107 ? VAL A 100 VAL A 103 AE 2 HIS A 158 ? HIS A 165 ? HIS A 154 HIS A 161 AE 3 PHE A 147 ? ARG A 151 ? PHE A 143 ARG A 147 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA 1 2 N SER A 47 ? N SER A 43 O ARG A 63 ? O ARG A 59 AA 2 3 N ALA A 66 ? N ALA A 62 O HIS A 7 ? O HIS A 3 AA 3 4 N ARG A 12 ? N ARG A 8 O GLN A 88 ? O GLN A 84 AB 1 2 N SER A 47 ? N SER A 43 O ARG A 63 ? O ARG A 59 AB 2 3 N ALA A 66 ? N ALA A 62 O HIS A 7 ? O HIS A 3 AB 3 4 N TYR A 8 ? N TYR A 4 O ALA A 93 ? O ALA A 89 AC 1 2 N GLN A 88 ? N GLN A 84 O ARG A 12 ? O ARG A 8 AD 1 2 N ARG A 102 ? N ARG A 98 O VAL A 188 ? O VAL A 184 AE 1 2 N VAL A 107 ? N VAL A 103 O PHE A 162 ? O PHE A 158 AE 2 3 N LEU A 161 ? N LEU A 157 O VAL A 148 ? O VAL A 144 # _database_PDB_matrix.entry_id 2XLJ _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 2XLJ _atom_sites.fract_transf_matrix[1][1] 0.025478 _atom_sites.fract_transf_matrix[1][2] 0.014710 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.029419 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.003363 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 -3 ? ? ? A . n A 1 2 SER 2 -2 ? ? ? A . n A 1 3 PHE 3 -1 ? ? ? A . n A 1 4 THR 4 0 0 THR THR A . n A 1 5 MET 5 1 1 MET MET A . n A 1 6 ASP 6 2 2 ASP ASP A . n A 1 7 HIS 7 3 3 HIS HIS A . n A 1 8 TYR 8 4 4 TYR TYR A . n A 1 9 LEU 9 5 5 LEU LEU A . n A 1 10 ASP 10 6 6 ASP ASP A . n A 1 11 ILE 11 7 7 ILE ILE A . n A 1 12 ARG 12 8 8 ARG ARG A . n A 1 13 LEU 13 9 9 LEU LEU A . n A 1 14 ARG 14 10 10 ARG ARG A . n A 1 15 PRO 15 11 11 PRO PRO A . n A 1 16 ASP 16 12 12 ASP ASP A . n A 1 17 PRO 17 13 13 PRO PRO A . n A 1 18 GLU 18 14 14 GLU GLU A . n A 1 19 PHE 19 15 15 PHE PHE A . n A 1 20 PRO 20 16 16 PRO PRO A . n A 1 21 PRO 21 17 17 PRO PRO A . n A 1 22 ALA 22 18 18 ALA ALA A . n A 1 23 GLN 23 19 19 GLN GLN A . n A 1 24 LEU 24 20 20 LEU LEU A . n A 1 25 MET 25 21 21 MET MET A . n A 1 26 CYS 26 22 22 CYS CYS A . n A 1 27 VAL 27 23 23 VAL VAL A . n A 1 28 LEU 28 24 24 LEU LEU A . n A 1 29 PHE 29 25 25 PHE PHE A . n A 1 30 GLY 30 26 26 GLY GLY A . n A 1 31 LYS 31 27 27 LYS LYS A . n A 1 32 LEU 32 28 28 LEU LEU A . n A 1 33 HIS 33 29 29 HIS HIS A . n A 1 34 GLN 34 30 30 GLN GLN A . n A 1 35 ALA 35 31 31 ALA ALA A . n A 1 36 LEU 36 32 32 LEU LEU A . n A 1 37 VAL 37 33 33 VAL VAL A . n A 1 38 ALA 38 34 34 ALA ALA A . n A 1 39 GLN 39 35 35 GLN GLN A . n A 1 40 GLY 40 36 36 GLY GLY A . n A 1 41 GLY 41 37 37 GLY GLY A . n A 1 42 ASP 42 38 38 ASP ASP A . n A 1 43 ARG 43 39 39 ARG ARG A . n A 1 44 ILE 44 40 40 ILE ILE A . n A 1 45 GLY 45 41 41 GLY GLY A . n A 1 46 VAL 46 42 42 VAL VAL A . n A 1 47 SER 47 43 43 SER SER A . n A 1 48 PHE 48 44 44 PHE PHE A . n A 1 49 PRO 49 45 45 PRO PRO A . n A 1 50 ASP 50 46 46 ASP ASP A . n A 1 51 LEU 51 47 47 LEU LEU A . n A 1 52 ASP 52 48 48 ASP ASP A . n A 1 53 GLU 53 49 49 GLU GLU A . n A 1 54 SER 54 50 50 SER SER A . n A 1 55 ARG 55 51 51 ARG ARG A . n A 1 56 SER 56 52 52 SER SER A . n A 1 57 ARG 57 53 53 ARG ARG A . n A 1 58 LEU 58 54 54 LEU LEU A . n A 1 59 GLY 59 55 55 GLY GLY A . n A 1 60 GLU 60 56 56 GLU GLU A . n A 1 61 ARG 61 57 57 ARG ARG A . n A 1 62 LEU 62 58 58 LEU LEU A . n A 1 63 ARG 63 59 59 ARG ARG A . n A 1 64 ILE 64 60 60 ILE ILE A . n A 1 65 HIS 65 61 61 HIS HIS A . n A 1 66 ALA 66 62 62 ALA ALA A . n A 1 67 SER 67 63 63 SER SER A . n A 1 68 ALA 68 64 64 ALA ALA A . n A 1 69 ASP 69 65 65 ASP ASP A . n A 1 70 ASP 70 66 66 ASP ASP A . n A 1 71 LEU 71 67 67 LEU LEU A . n A 1 72 ARG 72 68 68 ARG ARG A . n A 1 73 ALA 73 69 69 ALA ALA A . n A 1 74 LEU 74 70 70 LEU LEU A . n A 1 75 LEU 75 71 71 LEU LEU A . n A 1 76 ALA 76 72 72 ALA ALA A . n A 1 77 ARG 77 73 73 ARG ARG A . n A 1 78 PRO 78 74 74 PRO PRO A . n A 1 79 TRP 79 75 75 TRP TRP A . n A 1 80 LEU 80 76 76 LEU LEU A . n A 1 81 GLU 81 77 77 GLU GLU A . n A 1 82 GLY 82 78 78 GLY GLY A . n A 1 83 LEU 83 79 79 LEU LEU A . n A 1 84 ARG 84 80 80 ARG ARG A . n A 1 85 ASP 85 81 81 ASP ASP A . n A 1 86 HIS 86 82 82 HIS HIS A . n A 1 87 LEU 87 83 83 LEU LEU A . n A 1 88 GLN 88 84 84 GLN GLN A . n A 1 89 PHE 89 85 85 PHE PHE A . n A 1 90 GLY 90 86 86 GLY GLY A . n A 1 91 GLU 91 87 87 GLU GLU A . n A 1 92 PRO 92 88 88 PRO PRO A . n A 1 93 ALA 93 89 89 ALA ALA A . n A 1 94 VAL 94 90 90 VAL VAL A . n A 1 95 VAL 95 91 91 VAL VAL A . n A 1 96 PRO 96 92 92 PRO PRO A . n A 1 97 HIS 97 93 93 HIS HIS A . n A 1 98 PRO 98 94 94 PRO PRO A . n A 1 99 THR 99 95 95 THR THR A . n A 1 100 PRO 100 96 96 PRO PRO A . n A 1 101 TYR 101 97 97 TYR TYR A . n A 1 102 ARG 102 98 98 ARG ARG A . n A 1 103 GLN 103 99 99 GLN GLN A . n A 1 104 VAL 104 100 100 VAL VAL A . n A 1 105 SER 105 101 101 SER SER A . n A 1 106 ARG 106 102 102 ARG ARG A . n A 1 107 VAL 107 103 103 VAL VAL A . n A 1 108 GLN 108 104 104 GLN GLN A . n A 1 109 ALA 109 105 105 ALA ALA A . n A 1 110 LYS 110 106 106 LYS LYS A . n A 1 111 SER 111 107 107 SER SER A . n A 1 112 ASN 112 108 108 ASN ASN A . n A 1 113 PRO 113 109 109 PRO PRO A . n A 1 114 GLU 114 110 110 GLU GLU A . n A 1 115 ARG 115 111 111 ARG ARG A . n A 1 116 LEU 116 112 112 LEU LEU A . n A 1 117 ARG 117 113 113 ARG ARG A . n A 1 118 ARG 118 114 114 ARG ARG A . n A 1 119 ARG 119 115 115 ARG ARG A . n A 1 120 LEU 120 116 116 LEU LEU A . n A 1 121 MET 121 117 117 MET MET A . n A 1 122 ARG 122 118 118 ARG ARG A . n A 1 123 ARG 123 119 119 ARG ARG A . n A 1 124 HIS 124 120 120 HIS HIS A . n A 1 125 ASP 125 121 121 ASP ASP A . n A 1 126 LEU 126 122 ? ? ? A . n A 1 127 SER 127 123 ? ? ? A . n A 1 128 GLU 128 124 124 GLU GLU A . n A 1 129 GLU 129 125 125 GLU GLU A . n A 1 130 GLU 130 126 126 GLU GLU A . n A 1 131 ALA 131 127 127 ALA ALA A . n A 1 132 ARG 132 128 128 ARG ARG A . n A 1 133 LYS 133 129 129 LYS LYS A . n A 1 134 ARG 134 130 130 ARG ARG A . n A 1 135 ILE 135 131 ? ? ? A . n A 1 136 PRO 136 132 ? ? ? A . n A 1 137 ASP 137 133 ? ? ? A . n A 1 138 THR 138 134 ? ? ? A . n A 1 139 VAL 139 135 ? ? ? A . n A 1 140 ALA 140 136 ? ? ? A . n A 1 141 ARG 141 137 ? ? ? A . n A 1 142 THR 142 138 ? ? ? A . n A 1 143 LEU 143 139 139 LEU LEU A . n A 1 144 ASP 144 140 140 ASP ASP A . n A 1 145 LEU 145 141 141 LEU LEU A . n A 1 146 PRO 146 142 142 PRO PRO A . n A 1 147 PHE 147 143 143 PHE PHE A . n A 1 148 VAL 148 144 144 VAL VAL A . n A 1 149 THR 149 145 145 THR THR A . n A 1 150 LEU 150 146 146 LEU LEU A . n A 1 151 ARG 151 147 147 ARG ARG A . n A 1 152 SER 152 148 148 SER SER A . n A 1 153 GLN 153 149 149 GLN GLN A . n A 1 154 SER 154 150 150 SER SER A . n A 1 155 THR 155 151 151 THR THR A . n A 1 156 GLY 156 152 152 GLY GLY A . n A 1 157 GLN 157 153 153 GLN GLN A . n A 1 158 HIS 158 154 154 HIS HIS A . n A 1 159 PHE 159 155 155 PHE PHE A . n A 1 160 ARG 160 156 156 ARG ARG A . n A 1 161 LEU 161 157 157 LEU LEU A . n A 1 162 PHE 162 158 158 PHE PHE A . n A 1 163 ILE 163 159 159 ILE ILE A . n A 1 164 ARG 164 160 160 ARG ARG A . n A 1 165 HIS 165 161 161 HIS HIS A . n A 1 166 GLY 166 162 162 GLY GLY A . n A 1 167 PRO 167 163 163 PRO PRO A . n A 1 168 LEU 168 164 164 LEU LEU A . n A 1 169 GLN 169 165 165 GLN GLN A . n A 1 170 VAL 170 166 166 VAL VAL A . n A 1 171 THR 171 167 167 THR THR A . n A 1 172 ALA 172 168 168 ALA ALA A . n A 1 173 GLU 173 169 169 GLU GLU A . n A 1 174 GLU 174 170 170 GLU GLU A . n A 1 175 GLY 175 171 171 GLY GLY A . n A 1 176 GLY 176 172 172 GLY GLY A . n A 1 177 PHE 177 173 173 PHE PHE A . n A 1 178 THR 178 174 174 THR THR A . n A 1 179 CYS 179 175 175 CYS CYS A . n A 1 180 TYR 180 176 176 TYR TYR A . n A 1 181 GLY 181 177 177 GLY GLY A . n A 1 182 LEU 182 178 178 LEU LEU A . n A 1 183 SER 183 179 179 SER SER A . n A 1 184 LYS 184 180 180 LYS LYS A . n A 1 185 GLY 185 181 181 GLY GLY A . n A 1 186 GLY 186 182 182 GLY GLY A . n A 1 187 PHE 187 183 183 PHE PHE A . n A 1 188 VAL 188 184 184 VAL VAL A . n A 1 189 PRO 189 185 185 PRO PRO A . n A 1 190 TRP 190 186 186 TRP TRP A . n A 1 191 PHE 191 187 187 PHE PHE A . n B 2 1 C 1 6 6 C C B . n B 2 2 U 2 7 7 U U B . n B 2 3 G 3 8 8 G G B . n B 2 4 C 4 9 9 C C B . n B 2 5 C 5 10 10 C C B . n B 2 6 G 6 11 11 G G B . n B 2 7 U 7 12 12 U U B . n B 2 8 A 8 13 13 A A B . n B 2 9 U 9 14 14 U U B . n B 2 10 A 10 15 15 A A B . n B 2 11 G 11 16 16 G G B . n B 2 12 G 12 17 17 G G B . n B 2 13 C 13 18 18 C C B . n B 2 14 A 14 19 19 A A B . n B 2 15 DG 15 20 20 DG DG B . n B 2 16 C 16 21 21 C C B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 HOH 1 2001 2001 HOH HOH A . C 3 HOH 2 2002 2002 HOH HOH A . C 3 HOH 3 2003 2003 HOH HOH A . C 3 HOH 4 2004 2004 HOH HOH A . D 3 HOH 1 2001 2001 HOH HOH B . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 2020 ? 1 MORE -11.1 ? 1 'SSA (A^2)' 11910 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2010-09-22 2 'Structure model' 1 1 2011-05-08 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2023-12-20 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' 6 4 'Structure model' Other 7 4 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' chem_comp_atom 2 4 'Structure model' chem_comp_bond 3 4 'Structure model' database_2 4 4 'Structure model' pdbx_database_status 5 4 'Structure model' pdbx_initial_refinement_model 6 4 'Structure model' struct_conn # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_pdbx_database_status.status_code_sf' 4 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][3] 'X-RAY DIFFRACTION' 1 ? refined -17.3359 3.5159 -22.9719 0.6752 0.3561 0.5142 0.3621 -0.0583 -0.1224 1.6605 6.1516 7.2210 -0.7663 -0.9868 -0.3915 -0.1089 0.1007 0.0086 0.0292 0.1632 -0.1274 -0.1174 0.1607 0.0000 'X-RAY DIFFRACTION' 2 ? refined -34.5452 -2.4335 -52.0052 1.0321 1.6078 0.9171 -0.3599 -0.2937 0.0291 -0.0024 0.1821 0.0066 0.0859 -0.0055 -0.0634 -0.2482 -0.3005 0.9019 -0.1536 0.0573 0.9233 -0.8926 -2.3294 -0.0012 'X-RAY DIFFRACTION' 3 ? refined -24.3930 -3.3367 -45.3922 1.5500 0.7367 0.7621 -0.0866 -0.1540 -0.1674 1.2145 0.7593 1.2195 -0.0528 -0.1915 -0.9697 0.0022 0.3570 -0.1421 0.4343 0.1442 -0.0033 1.3652 -2.1512 0.0010 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 'X-RAY DIFFRACTION' 1 1 ? ? ? ? ? ? ? ? ? 'CHAIN A AND NOT RESID 108:130' 'X-RAY DIFFRACTION' 2 2 ? ? ? ? ? ? ? ? ? 'CHAIN A AND RESID 108:130' 'X-RAY DIFFRACTION' 3 3 ? ? ? ? ? ? ? ? ? 'CHAIN B' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal PHENIX refinement '(PHENIX.REFINE)' ? 1 XDS 'data reduction' . ? 2 XSCALE 'data scaling' . ? 3 PHASER phasing . ? 4 # _pdbx_entry_details.entry_id 2XLJ _pdbx_entry_details.compound_details 'ENGINEERED RESIDUE IN CHAIN A, SER 22 TO CYS' _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ;THE SEQUENCE GSFT AT THE N-TERMINUS IS DERIVED FROM THE EXPRESSION VECTOR. THE DOWNSTREAM SEQUENCE MDHYLDIRLRPDPEFPPAQL IS NOT PRESENT IN THE GB YP_790814 ENTRY DUE TO MISANNOTATED METHIONINE START CODON. THE SEQUENCE CONFLICT STEMS A3KUJ4 CORRESPONDING TO A DIFFERENT P. AERUGINOSA STRAIN. ; _pdbx_entry_details.has_ligand_of_interest ? # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 SER A 50 ? ? -97.61 -60.39 2 1 ALA A 62 ? ? 177.38 172.57 3 1 LEU A 70 ? ? -57.41 -72.18 4 1 LEU A 71 ? ? -58.82 -5.88 5 1 PRO A 74 ? ? -88.45 47.69 6 1 ASN A 108 ? ? 55.05 73.36 7 1 HIS A 120 ? ? -146.05 14.18 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A THR 0 ? OG1 ? A THR 4 OG1 2 1 Y 1 A THR 0 ? CG2 ? A THR 4 CG2 3 1 Y 1 A GLU 124 ? CG ? A GLU 128 CG 4 1 Y 1 A GLU 124 ? CD ? A GLU 128 CD 5 1 Y 1 A GLU 124 ? OE1 ? A GLU 128 OE1 6 1 Y 1 A GLU 124 ? OE2 ? A GLU 128 OE2 7 1 Y 1 A GLU 125 ? CG ? A GLU 129 CG 8 1 Y 1 A GLU 125 ? CD ? A GLU 129 CD 9 1 Y 1 A GLU 125 ? OE1 ? A GLU 129 OE1 10 1 Y 1 A GLU 125 ? OE2 ? A GLU 129 OE2 11 1 Y 1 A GLU 126 ? CG ? A GLU 130 CG 12 1 Y 1 A GLU 126 ? CD ? A GLU 130 CD 13 1 Y 1 A GLU 126 ? OE1 ? A GLU 130 OE1 14 1 Y 1 A GLU 126 ? OE2 ? A GLU 130 OE2 15 1 Y 1 A ARG 128 ? CG ? A ARG 132 CG 16 1 Y 1 A ARG 128 ? CD ? A ARG 132 CD 17 1 Y 1 A ARG 128 ? NE ? A ARG 132 NE 18 1 Y 1 A ARG 128 ? CZ ? A ARG 132 CZ 19 1 Y 1 A ARG 128 ? NH1 ? A ARG 132 NH1 20 1 Y 1 A ARG 128 ? NH2 ? A ARG 132 NH2 21 1 Y 1 A LYS 129 ? CG ? A LYS 133 CG 22 1 Y 1 A LYS 129 ? CD ? A LYS 133 CD 23 1 Y 1 A LYS 129 ? CE ? A LYS 133 CE 24 1 Y 1 A LYS 129 ? NZ ? A LYS 133 NZ 25 1 Y 1 A ARG 130 ? CG ? A ARG 134 CG 26 1 Y 1 A ARG 130 ? CD ? A ARG 134 CD 27 1 Y 1 A ARG 130 ? NE ? A ARG 134 NE 28 1 Y 1 A ARG 130 ? CZ ? A ARG 134 CZ 29 1 Y 1 A ARG 130 ? NH1 ? A ARG 134 NH1 30 1 Y 1 A ARG 130 ? NH2 ? A ARG 134 NH2 31 1 Y 1 B C 21 ? "C5'" ? B C 16 "C5'" 32 1 Y 1 B C 21 ? "C4'" ? B C 16 "C4'" 33 1 Y 1 B C 21 ? "O4'" ? B C 16 "O4'" 34 1 Y 1 B C 21 ? "C3'" ? B C 16 "C3'" 35 1 Y 1 B C 21 ? "O3'" ? B C 16 "O3'" 36 1 Y 1 B C 21 ? "C2'" ? B C 16 "C2'" 37 1 Y 1 B C 21 ? "O2'" ? B C 16 "O2'" 38 1 Y 1 B C 21 ? "C1'" ? B C 16 "C1'" 39 1 Y 1 B C 21 ? N1 ? B C 16 N1 40 1 Y 1 B C 21 ? C2 ? B C 16 C2 41 1 Y 1 B C 21 ? O2 ? B C 16 O2 42 1 Y 1 B C 21 ? N3 ? B C 16 N3 43 1 Y 1 B C 21 ? C4 ? B C 16 C4 44 1 Y 1 B C 21 ? N4 ? B C 16 N4 45 1 Y 1 B C 21 ? C5 ? B C 16 C5 46 1 Y 1 B C 21 ? C6 ? B C 16 C6 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY -3 ? A GLY 1 2 1 Y 1 A SER -2 ? A SER 2 3 1 Y 1 A PHE -1 ? A PHE 3 4 1 Y 1 A LEU 122 ? A LEU 126 5 1 Y 1 A SER 123 ? A SER 127 6 1 Y 1 A ILE 131 ? A ILE 135 7 1 Y 1 A PRO 132 ? A PRO 136 8 1 Y 1 A ASP 133 ? A ASP 137 9 1 Y 1 A THR 134 ? A THR 138 10 1 Y 1 A VAL 135 ? A VAL 139 11 1 Y 1 A ALA 136 ? A ALA 140 12 1 Y 1 A ARG 137 ? A ARG 141 13 1 Y 1 A THR 138 ? A THR 142 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal A OP3 O N N 1 A P P N N 2 A OP1 O N N 3 A OP2 O N N 4 A "O5'" O N N 5 A "C5'" C N N 6 A "C4'" C N R 7 A "O4'" O N N 8 A "C3'" C N S 9 A "O3'" O N N 10 A "C2'" C N R 11 A "O2'" O N N 12 A "C1'" C N R 13 A N9 N Y N 14 A C8 C Y N 15 A N7 N Y N 16 A C5 C Y N 17 A C6 C Y N 18 A N6 N N N 19 A N1 N Y N 20 A C2 C Y N 21 A N3 N Y N 22 A C4 C Y N 23 A HOP3 H N N 24 A HOP2 H N N 25 A "H5'" H N N 26 A "H5''" H N N 27 A "H4'" H N N 28 A "H3'" H N N 29 A "HO3'" H N N 30 A "H2'" H N N 31 A "HO2'" H N N 32 A "H1'" H N N 33 A H8 H N N 34 A H61 H N N 35 A H62 H N N 36 A H2 H N N 37 ALA N N N N 38 ALA CA C N S 39 ALA C C N N 40 ALA O O N N 41 ALA CB C N N 42 ALA OXT O N N 43 ALA H H N N 44 ALA H2 H N N 45 ALA HA H N N 46 ALA HB1 H N N 47 ALA HB2 H N N 48 ALA HB3 H N N 49 ALA HXT H N N 50 ARG N N N N 51 ARG CA C N S 52 ARG C C N N 53 ARG O O N N 54 ARG CB C N N 55 ARG CG C N N 56 ARG CD C N N 57 ARG NE N N N 58 ARG CZ C N N 59 ARG NH1 N N N 60 ARG NH2 N N N 61 ARG OXT O N N 62 ARG H H N N 63 ARG H2 H N N 64 ARG HA H N N 65 ARG HB2 H N N 66 ARG HB3 H N N 67 ARG HG2 H N N 68 ARG HG3 H N N 69 ARG HD2 H N N 70 ARG HD3 H N N 71 ARG HE H N N 72 ARG HH11 H N N 73 ARG HH12 H N N 74 ARG HH21 H N N 75 ARG HH22 H N N 76 ARG HXT H N N 77 ASN N N N N 78 ASN CA C N S 79 ASN C C N N 80 ASN O O N N 81 ASN CB C N N 82 ASN CG C N N 83 ASN OD1 O N N 84 ASN ND2 N N N 85 ASN OXT O N N 86 ASN H H N N 87 ASN H2 H N N 88 ASN HA H N N 89 ASN HB2 H N N 90 ASN HB3 H N N 91 ASN HD21 H N N 92 ASN HD22 H N N 93 ASN HXT H N N 94 ASP N N N N 95 ASP CA C N S 96 ASP C C N N 97 ASP O O N N 98 ASP CB C N N 99 ASP CG C N N 100 ASP OD1 O N N 101 ASP OD2 O N N 102 ASP OXT O N N 103 ASP H H N N 104 ASP H2 H N N 105 ASP HA H N N 106 ASP HB2 H N N 107 ASP HB3 H N N 108 ASP HD2 H N N 109 ASP HXT H N N 110 C OP3 O N N 111 C P P N N 112 C OP1 O N N 113 C OP2 O N N 114 C "O5'" O N N 115 C "C5'" C N N 116 C "C4'" C N R 117 C "O4'" O N N 118 C "C3'" C N S 119 C "O3'" O N N 120 C "C2'" C N R 121 C "O2'" O N N 122 C "C1'" C N R 123 C N1 N N N 124 C C2 C N N 125 C O2 O N N 126 C N3 N N N 127 C C4 C N N 128 C N4 N N N 129 C C5 C N N 130 C C6 C N N 131 C HOP3 H N N 132 C HOP2 H N N 133 C "H5'" H N N 134 C "H5''" H N N 135 C "H4'" H N N 136 C "H3'" H N N 137 C "HO3'" H N N 138 C "H2'" H N N 139 C "HO2'" H N N 140 C "H1'" H N N 141 C H41 H N N 142 C H42 H N N 143 C H5 H N N 144 C H6 H N N 145 CYS N N N N 146 CYS CA C N R 147 CYS C C N N 148 CYS O O N N 149 CYS CB C N N 150 CYS SG S N N 151 CYS OXT O N N 152 CYS H H N N 153 CYS H2 H N N 154 CYS HA H N N 155 CYS HB2 H N N 156 CYS HB3 H N N 157 CYS HG H N N 158 CYS HXT H N N 159 DG OP3 O N N 160 DG P P N N 161 DG OP1 O N N 162 DG OP2 O N N 163 DG "O5'" O N N 164 DG "C5'" C N N 165 DG "C4'" C N R 166 DG "O4'" O N N 167 DG "C3'" C N S 168 DG "O3'" O N N 169 DG "C2'" C N N 170 DG "C1'" C N R 171 DG N9 N Y N 172 DG C8 C Y N 173 DG N7 N Y N 174 DG C5 C Y N 175 DG C6 C N N 176 DG O6 O N N 177 DG N1 N N N 178 DG C2 C N N 179 DG N2 N N N 180 DG N3 N N N 181 DG C4 C Y N 182 DG HOP3 H N N 183 DG HOP2 H N N 184 DG "H5'" H N N 185 DG "H5''" H N N 186 DG "H4'" H N N 187 DG "H3'" H N N 188 DG "HO3'" H N N 189 DG "H2'" H N N 190 DG "H2''" H N N 191 DG "H1'" H N N 192 DG H8 H N N 193 DG H1 H N N 194 DG H21 H N N 195 DG H22 H N N 196 G OP3 O N N 197 G P P N N 198 G OP1 O N N 199 G OP2 O N N 200 G "O5'" O N N 201 G "C5'" C N N 202 G "C4'" C N R 203 G "O4'" O N N 204 G "C3'" C N S 205 G "O3'" O N N 206 G "C2'" C N R 207 G "O2'" O N N 208 G "C1'" C N R 209 G N9 N Y N 210 G C8 C Y N 211 G N7 N Y N 212 G C5 C Y N 213 G C6 C N N 214 G O6 O N N 215 G N1 N N N 216 G C2 C N N 217 G N2 N N N 218 G N3 N N N 219 G C4 C Y N 220 G HOP3 H N N 221 G HOP2 H N N 222 G "H5'" H N N 223 G "H5''" H N N 224 G "H4'" H N N 225 G "H3'" H N N 226 G "HO3'" H N N 227 G "H2'" H N N 228 G "HO2'" H N N 229 G "H1'" H N N 230 G H8 H N N 231 G H1 H N N 232 G H21 H N N 233 G H22 H N N 234 GLN N N N N 235 GLN CA C N S 236 GLN C C N N 237 GLN O O N N 238 GLN CB C N N 239 GLN CG C N N 240 GLN CD C N N 241 GLN OE1 O N N 242 GLN NE2 N N N 243 GLN OXT O N N 244 GLN H H N N 245 GLN H2 H N N 246 GLN HA H N N 247 GLN HB2 H N N 248 GLN HB3 H N N 249 GLN HG2 H N N 250 GLN HG3 H N N 251 GLN HE21 H N N 252 GLN HE22 H N N 253 GLN HXT H N N 254 GLU N N N N 255 GLU CA C N S 256 GLU C C N N 257 GLU O O N N 258 GLU CB C N N 259 GLU CG C N N 260 GLU CD C N N 261 GLU OE1 O N N 262 GLU OE2 O N N 263 GLU OXT O N N 264 GLU H H N N 265 GLU H2 H N N 266 GLU HA H N N 267 GLU HB2 H N N 268 GLU HB3 H N N 269 GLU HG2 H N N 270 GLU HG3 H N N 271 GLU HE2 H N N 272 GLU HXT H N N 273 GLY N N N N 274 GLY CA C N N 275 GLY C C N N 276 GLY O O N N 277 GLY OXT O N N 278 GLY H H N N 279 GLY H2 H N N 280 GLY HA2 H N N 281 GLY HA3 H N N 282 GLY HXT H N N 283 HIS N N N N 284 HIS CA C N S 285 HIS C C N N 286 HIS O O N N 287 HIS CB C N N 288 HIS CG C Y N 289 HIS ND1 N Y N 290 HIS CD2 C Y N 291 HIS CE1 C Y N 292 HIS NE2 N Y N 293 HIS OXT O N N 294 HIS H H N N 295 HIS H2 H N N 296 HIS HA H N N 297 HIS HB2 H N N 298 HIS HB3 H N N 299 HIS HD1 H N N 300 HIS HD2 H N N 301 HIS HE1 H N N 302 HIS HE2 H N N 303 HIS HXT H N N 304 HOH O O N N 305 HOH H1 H N N 306 HOH H2 H N N 307 ILE N N N N 308 ILE CA C N S 309 ILE C C N N 310 ILE O O N N 311 ILE CB C N S 312 ILE CG1 C N N 313 ILE CG2 C N N 314 ILE CD1 C N N 315 ILE OXT O N N 316 ILE H H N N 317 ILE H2 H N N 318 ILE HA H N N 319 ILE HB H N N 320 ILE HG12 H N N 321 ILE HG13 H N N 322 ILE HG21 H N N 323 ILE HG22 H N N 324 ILE HG23 H N N 325 ILE HD11 H N N 326 ILE HD12 H N N 327 ILE HD13 H N N 328 ILE HXT H N N 329 LEU N N N N 330 LEU CA C N S 331 LEU C C N N 332 LEU O O N N 333 LEU CB C N N 334 LEU CG C N N 335 LEU CD1 C N N 336 LEU CD2 C N N 337 LEU OXT O N N 338 LEU H H N N 339 LEU H2 H N N 340 LEU HA H N N 341 LEU HB2 H N N 342 LEU HB3 H N N 343 LEU HG H N N 344 LEU HD11 H N N 345 LEU HD12 H N N 346 LEU HD13 H N N 347 LEU HD21 H N N 348 LEU HD22 H N N 349 LEU HD23 H N N 350 LEU HXT H N N 351 LYS N N N N 352 LYS CA C N S 353 LYS C C N N 354 LYS O O N N 355 LYS CB C N N 356 LYS CG C N N 357 LYS CD C N N 358 LYS CE C N N 359 LYS NZ N N N 360 LYS OXT O N N 361 LYS H H N N 362 LYS H2 H N N 363 LYS HA H N N 364 LYS HB2 H N N 365 LYS HB3 H N N 366 LYS HG2 H N N 367 LYS HG3 H N N 368 LYS HD2 H N N 369 LYS HD3 H N N 370 LYS HE2 H N N 371 LYS HE3 H N N 372 LYS HZ1 H N N 373 LYS HZ2 H N N 374 LYS HZ3 H N N 375 LYS HXT H N N 376 MET N N N N 377 MET CA C N S 378 MET C C N N 379 MET O O N N 380 MET CB C N N 381 MET CG C N N 382 MET SD S N N 383 MET CE C N N 384 MET OXT O N N 385 MET H H N N 386 MET H2 H N N 387 MET HA H N N 388 MET HB2 H N N 389 MET HB3 H N N 390 MET HG2 H N N 391 MET HG3 H N N 392 MET HE1 H N N 393 MET HE2 H N N 394 MET HE3 H N N 395 MET HXT H N N 396 PHE N N N N 397 PHE CA C N S 398 PHE C C N N 399 PHE O O N N 400 PHE CB C N N 401 PHE CG C Y N 402 PHE CD1 C Y N 403 PHE CD2 C Y N 404 PHE CE1 C Y N 405 PHE CE2 C Y N 406 PHE CZ C Y N 407 PHE OXT O N N 408 PHE H H N N 409 PHE H2 H N N 410 PHE HA H N N 411 PHE HB2 H N N 412 PHE HB3 H N N 413 PHE HD1 H N N 414 PHE HD2 H N N 415 PHE HE1 H N N 416 PHE HE2 H N N 417 PHE HZ H N N 418 PHE HXT H N N 419 PRO N N N N 420 PRO CA C N S 421 PRO C C N N 422 PRO O O N N 423 PRO CB C N N 424 PRO CG C N N 425 PRO CD C N N 426 PRO OXT O N N 427 PRO H H N N 428 PRO HA H N N 429 PRO HB2 H N N 430 PRO HB3 H N N 431 PRO HG2 H N N 432 PRO HG3 H N N 433 PRO HD2 H N N 434 PRO HD3 H N N 435 PRO HXT H N N 436 SER N N N N 437 SER CA C N S 438 SER C C N N 439 SER O O N N 440 SER CB C N N 441 SER OG O N N 442 SER OXT O N N 443 SER H H N N 444 SER H2 H N N 445 SER HA H N N 446 SER HB2 H N N 447 SER HB3 H N N 448 SER HG H N N 449 SER HXT H N N 450 THR N N N N 451 THR CA C N S 452 THR C C N N 453 THR O O N N 454 THR CB C N R 455 THR OG1 O N N 456 THR CG2 C N N 457 THR OXT O N N 458 THR H H N N 459 THR H2 H N N 460 THR HA H N N 461 THR HB H N N 462 THR HG1 H N N 463 THR HG21 H N N 464 THR HG22 H N N 465 THR HG23 H N N 466 THR HXT H N N 467 TRP N N N N 468 TRP CA C N S 469 TRP C C N N 470 TRP O O N N 471 TRP CB C N N 472 TRP CG C Y N 473 TRP CD1 C Y N 474 TRP CD2 C Y N 475 TRP NE1 N Y N 476 TRP CE2 C Y N 477 TRP CE3 C Y N 478 TRP CZ2 C Y N 479 TRP CZ3 C Y N 480 TRP CH2 C Y N 481 TRP OXT O N N 482 TRP H H N N 483 TRP H2 H N N 484 TRP HA H N N 485 TRP HB2 H N N 486 TRP HB3 H N N 487 TRP HD1 H N N 488 TRP HE1 H N N 489 TRP HE3 H N N 490 TRP HZ2 H N N 491 TRP HZ3 H N N 492 TRP HH2 H N N 493 TRP HXT H N N 494 TYR N N N N 495 TYR CA C N S 496 TYR C C N N 497 TYR O O N N 498 TYR CB C N N 499 TYR CG C Y N 500 TYR CD1 C Y N 501 TYR CD2 C Y N 502 TYR CE1 C Y N 503 TYR CE2 C Y N 504 TYR CZ C Y N 505 TYR OH O N N 506 TYR OXT O N N 507 TYR H H N N 508 TYR H2 H N N 509 TYR HA H N N 510 TYR HB2 H N N 511 TYR HB3 H N N 512 TYR HD1 H N N 513 TYR HD2 H N N 514 TYR HE1 H N N 515 TYR HE2 H N N 516 TYR HH H N N 517 TYR HXT H N N 518 U OP3 O N N 519 U P P N N 520 U OP1 O N N 521 U OP2 O N N 522 U "O5'" O N N 523 U "C5'" C N N 524 U "C4'" C N R 525 U "O4'" O N N 526 U "C3'" C N S 527 U "O3'" O N N 528 U "C2'" C N R 529 U "O2'" O N N 530 U "C1'" C N R 531 U N1 N N N 532 U C2 C N N 533 U O2 O N N 534 U N3 N N N 535 U C4 C N N 536 U O4 O N N 537 U C5 C N N 538 U C6 C N N 539 U HOP3 H N N 540 U HOP2 H N N 541 U "H5'" H N N 542 U "H5''" H N N 543 U "H4'" H N N 544 U "H3'" H N N 545 U "HO3'" H N N 546 U "H2'" H N N 547 U "HO2'" H N N 548 U "H1'" H N N 549 U H3 H N N 550 U H5 H N N 551 U H6 H N N 552 VAL N N N N 553 VAL CA C N S 554 VAL C C N N 555 VAL O O N N 556 VAL CB C N N 557 VAL CG1 C N N 558 VAL CG2 C N N 559 VAL OXT O N N 560 VAL H H N N 561 VAL H2 H N N 562 VAL HA H N N 563 VAL HB H N N 564 VAL HG11 H N N 565 VAL HG12 H N N 566 VAL HG13 H N N 567 VAL HG21 H N N 568 VAL HG22 H N N 569 VAL HG23 H N N 570 VAL HXT H N N 571 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A OP3 P sing N N 1 A OP3 HOP3 sing N N 2 A P OP1 doub N N 3 A P OP2 sing N N 4 A P "O5'" sing N N 5 A OP2 HOP2 sing N N 6 A "O5'" "C5'" sing N N 7 A "C5'" "C4'" sing N N 8 A "C5'" "H5'" sing N N 9 A "C5'" "H5''" sing N N 10 A "C4'" "O4'" sing N N 11 A "C4'" "C3'" sing N N 12 A "C4'" "H4'" sing N N 13 A "O4'" "C1'" sing N N 14 A "C3'" "O3'" sing N N 15 A "C3'" "C2'" sing N N 16 A "C3'" "H3'" sing N N 17 A "O3'" "HO3'" sing N N 18 A "C2'" "O2'" sing N N 19 A "C2'" "C1'" sing N N 20 A "C2'" "H2'" sing N N 21 A "O2'" "HO2'" sing N N 22 A "C1'" N9 sing N N 23 A "C1'" "H1'" sing N N 24 A N9 C8 sing Y N 25 A N9 C4 sing Y N 26 A C8 N7 doub Y N 27 A C8 H8 sing N N 28 A N7 C5 sing Y N 29 A C5 C6 sing Y N 30 A C5 C4 doub Y N 31 A C6 N6 sing N N 32 A C6 N1 doub Y N 33 A N6 H61 sing N N 34 A N6 H62 sing N N 35 A N1 C2 sing Y N 36 A C2 N3 doub Y N 37 A C2 H2 sing N N 38 A N3 C4 sing Y N 39 ALA N CA sing N N 40 ALA N H sing N N 41 ALA N H2 sing N N 42 ALA CA C sing N N 43 ALA CA CB sing N N 44 ALA CA HA sing N N 45 ALA C O doub N N 46 ALA C OXT sing N N 47 ALA CB HB1 sing N N 48 ALA CB HB2 sing N N 49 ALA CB HB3 sing N N 50 ALA OXT HXT sing N N 51 ARG N CA sing N N 52 ARG N H sing N N 53 ARG N H2 sing N N 54 ARG CA C sing N N 55 ARG CA CB sing N N 56 ARG CA HA sing N N 57 ARG C O doub N N 58 ARG C OXT sing N N 59 ARG CB CG sing N N 60 ARG CB HB2 sing N N 61 ARG CB HB3 sing N N 62 ARG CG CD sing N N 63 ARG CG HG2 sing N N 64 ARG CG HG3 sing N N 65 ARG CD NE sing N N 66 ARG CD HD2 sing N N 67 ARG CD HD3 sing N N 68 ARG NE CZ sing N N 69 ARG NE HE sing N N 70 ARG CZ NH1 sing N N 71 ARG CZ NH2 doub N N 72 ARG NH1 HH11 sing N N 73 ARG NH1 HH12 sing N N 74 ARG NH2 HH21 sing N N 75 ARG NH2 HH22 sing N N 76 ARG OXT HXT sing N N 77 ASN N CA sing N N 78 ASN N H sing N N 79 ASN N H2 sing N N 80 ASN CA C sing N N 81 ASN CA CB sing N N 82 ASN CA HA sing N N 83 ASN C O doub N N 84 ASN C OXT sing N N 85 ASN CB CG sing N N 86 ASN CB HB2 sing N N 87 ASN CB HB3 sing N N 88 ASN CG OD1 doub N N 89 ASN CG ND2 sing N N 90 ASN ND2 HD21 sing N N 91 ASN ND2 HD22 sing N N 92 ASN OXT HXT sing N N 93 ASP N CA sing N N 94 ASP N H sing N N 95 ASP N H2 sing N N 96 ASP CA C sing N N 97 ASP CA CB sing N N 98 ASP CA HA sing N N 99 ASP C O doub N N 100 ASP C OXT sing N N 101 ASP CB CG sing N N 102 ASP CB HB2 sing N N 103 ASP CB HB3 sing N N 104 ASP CG OD1 doub N N 105 ASP CG OD2 sing N N 106 ASP OD2 HD2 sing N N 107 ASP OXT HXT sing N N 108 C OP3 P sing N N 109 C OP3 HOP3 sing N N 110 C P OP1 doub N N 111 C P OP2 sing N N 112 C P "O5'" sing N N 113 C OP2 HOP2 sing N N 114 C "O5'" "C5'" sing N N 115 C "C5'" "C4'" sing N N 116 C "C5'" "H5'" sing N N 117 C "C5'" "H5''" sing N N 118 C "C4'" "O4'" sing N N 119 C "C4'" "C3'" sing N N 120 C "C4'" "H4'" sing N N 121 C "O4'" "C1'" sing N N 122 C "C3'" "O3'" sing N N 123 C "C3'" "C2'" sing N N 124 C "C3'" "H3'" sing N N 125 C "O3'" "HO3'" sing N N 126 C "C2'" "O2'" sing N N 127 C "C2'" "C1'" sing N N 128 C "C2'" "H2'" sing N N 129 C "O2'" "HO2'" sing N N 130 C "C1'" N1 sing N N 131 C "C1'" "H1'" sing N N 132 C N1 C2 sing N N 133 C N1 C6 sing N N 134 C C2 O2 doub N N 135 C C2 N3 sing N N 136 C N3 C4 doub N N 137 C C4 N4 sing N N 138 C C4 C5 sing N N 139 C N4 H41 sing N N 140 C N4 H42 sing N N 141 C C5 C6 doub N N 142 C C5 H5 sing N N 143 C C6 H6 sing N N 144 CYS N CA sing N N 145 CYS N H sing N N 146 CYS N H2 sing N N 147 CYS CA C sing N N 148 CYS CA CB sing N N 149 CYS CA HA sing N N 150 CYS C O doub N N 151 CYS C OXT sing N N 152 CYS CB SG sing N N 153 CYS CB HB2 sing N N 154 CYS CB HB3 sing N N 155 CYS SG HG sing N N 156 CYS OXT HXT sing N N 157 DG OP3 P sing N N 158 DG OP3 HOP3 sing N N 159 DG P OP1 doub N N 160 DG P OP2 sing N N 161 DG P "O5'" sing N N 162 DG OP2 HOP2 sing N N 163 DG "O5'" "C5'" sing N N 164 DG "C5'" "C4'" sing N N 165 DG "C5'" "H5'" sing N N 166 DG "C5'" "H5''" sing N N 167 DG "C4'" "O4'" sing N N 168 DG "C4'" "C3'" sing N N 169 DG "C4'" "H4'" sing N N 170 DG "O4'" "C1'" sing N N 171 DG "C3'" "O3'" sing N N 172 DG "C3'" "C2'" sing N N 173 DG "C3'" "H3'" sing N N 174 DG "O3'" "HO3'" sing N N 175 DG "C2'" "C1'" sing N N 176 DG "C2'" "H2'" sing N N 177 DG "C2'" "H2''" sing N N 178 DG "C1'" N9 sing N N 179 DG "C1'" "H1'" sing N N 180 DG N9 C8 sing Y N 181 DG N9 C4 sing Y N 182 DG C8 N7 doub Y N 183 DG C8 H8 sing N N 184 DG N7 C5 sing Y N 185 DG C5 C6 sing N N 186 DG C5 C4 doub Y N 187 DG C6 O6 doub N N 188 DG C6 N1 sing N N 189 DG N1 C2 sing N N 190 DG N1 H1 sing N N 191 DG C2 N2 sing N N 192 DG C2 N3 doub N N 193 DG N2 H21 sing N N 194 DG N2 H22 sing N N 195 DG N3 C4 sing N N 196 G OP3 P sing N N 197 G OP3 HOP3 sing N N 198 G P OP1 doub N N 199 G P OP2 sing N N 200 G P "O5'" sing N N 201 G OP2 HOP2 sing N N 202 G "O5'" "C5'" sing N N 203 G "C5'" "C4'" sing N N 204 G "C5'" "H5'" sing N N 205 G "C5'" "H5''" sing N N 206 G "C4'" "O4'" sing N N 207 G "C4'" "C3'" sing N N 208 G "C4'" "H4'" sing N N 209 G "O4'" "C1'" sing N N 210 G "C3'" "O3'" sing N N 211 G "C3'" "C2'" sing N N 212 G "C3'" "H3'" sing N N 213 G "O3'" "HO3'" sing N N 214 G "C2'" "O2'" sing N N 215 G "C2'" "C1'" sing N N 216 G "C2'" "H2'" sing N N 217 G "O2'" "HO2'" sing N N 218 G "C1'" N9 sing N N 219 G "C1'" "H1'" sing N N 220 G N9 C8 sing Y N 221 G N9 C4 sing Y N 222 G C8 N7 doub Y N 223 G C8 H8 sing N N 224 G N7 C5 sing Y N 225 G C5 C6 sing N N 226 G C5 C4 doub Y N 227 G C6 O6 doub N N 228 G C6 N1 sing N N 229 G N1 C2 sing N N 230 G N1 H1 sing N N 231 G C2 N2 sing N N 232 G C2 N3 doub N N 233 G N2 H21 sing N N 234 G N2 H22 sing N N 235 G N3 C4 sing N N 236 GLN N CA sing N N 237 GLN N H sing N N 238 GLN N H2 sing N N 239 GLN CA C sing N N 240 GLN CA CB sing N N 241 GLN CA HA sing N N 242 GLN C O doub N N 243 GLN C OXT sing N N 244 GLN CB CG sing N N 245 GLN CB HB2 sing N N 246 GLN CB HB3 sing N N 247 GLN CG CD sing N N 248 GLN CG HG2 sing N N 249 GLN CG HG3 sing N N 250 GLN CD OE1 doub N N 251 GLN CD NE2 sing N N 252 GLN NE2 HE21 sing N N 253 GLN NE2 HE22 sing N N 254 GLN OXT HXT sing N N 255 GLU N CA sing N N 256 GLU N H sing N N 257 GLU N H2 sing N N 258 GLU CA C sing N N 259 GLU CA CB sing N N 260 GLU CA HA sing N N 261 GLU C O doub N N 262 GLU C OXT sing N N 263 GLU CB CG sing N N 264 GLU CB HB2 sing N N 265 GLU CB HB3 sing N N 266 GLU CG CD sing N N 267 GLU CG HG2 sing N N 268 GLU CG HG3 sing N N 269 GLU CD OE1 doub N N 270 GLU CD OE2 sing N N 271 GLU OE2 HE2 sing N N 272 GLU OXT HXT sing N N 273 GLY N CA sing N N 274 GLY N H sing N N 275 GLY N H2 sing N N 276 GLY CA C sing N N 277 GLY CA HA2 sing N N 278 GLY CA HA3 sing N N 279 GLY C O doub N N 280 GLY C OXT sing N N 281 GLY OXT HXT sing N N 282 HIS N CA sing N N 283 HIS N H sing N N 284 HIS N H2 sing N N 285 HIS CA C sing N N 286 HIS CA CB sing N N 287 HIS CA HA sing N N 288 HIS C O doub N N 289 HIS C OXT sing N N 290 HIS CB CG sing N N 291 HIS CB HB2 sing N N 292 HIS CB HB3 sing N N 293 HIS CG ND1 sing Y N 294 HIS CG CD2 doub Y N 295 HIS ND1 CE1 doub Y N 296 HIS ND1 HD1 sing N N 297 HIS CD2 NE2 sing Y N 298 HIS CD2 HD2 sing N N 299 HIS CE1 NE2 sing Y N 300 HIS CE1 HE1 sing N N 301 HIS NE2 HE2 sing N N 302 HIS OXT HXT sing N N 303 HOH O H1 sing N N 304 HOH O H2 sing N N 305 ILE N CA sing N N 306 ILE N H sing N N 307 ILE N H2 sing N N 308 ILE CA C sing N N 309 ILE CA CB sing N N 310 ILE CA HA sing N N 311 ILE C O doub N N 312 ILE C OXT sing N N 313 ILE CB CG1 sing N N 314 ILE CB CG2 sing N N 315 ILE CB HB sing N N 316 ILE CG1 CD1 sing N N 317 ILE CG1 HG12 sing N N 318 ILE CG1 HG13 sing N N 319 ILE CG2 HG21 sing N N 320 ILE CG2 HG22 sing N N 321 ILE CG2 HG23 sing N N 322 ILE CD1 HD11 sing N N 323 ILE CD1 HD12 sing N N 324 ILE CD1 HD13 sing N N 325 ILE OXT HXT sing N N 326 LEU N CA sing N N 327 LEU N H sing N N 328 LEU N H2 sing N N 329 LEU CA C sing N N 330 LEU CA CB sing N N 331 LEU CA HA sing N N 332 LEU C O doub N N 333 LEU C OXT sing N N 334 LEU CB CG sing N N 335 LEU CB HB2 sing N N 336 LEU CB HB3 sing N N 337 LEU CG CD1 sing N N 338 LEU CG CD2 sing N N 339 LEU CG HG sing N N 340 LEU CD1 HD11 sing N N 341 LEU CD1 HD12 sing N N 342 LEU CD1 HD13 sing N N 343 LEU CD2 HD21 sing N N 344 LEU CD2 HD22 sing N N 345 LEU CD2 HD23 sing N N 346 LEU OXT HXT sing N N 347 LYS N CA sing N N 348 LYS N H sing N N 349 LYS N H2 sing N N 350 LYS CA C sing N N 351 LYS CA CB sing N N 352 LYS CA HA sing N N 353 LYS C O doub N N 354 LYS C OXT sing N N 355 LYS CB CG sing N N 356 LYS CB HB2 sing N N 357 LYS CB HB3 sing N N 358 LYS CG CD sing N N 359 LYS CG HG2 sing N N 360 LYS CG HG3 sing N N 361 LYS CD CE sing N N 362 LYS CD HD2 sing N N 363 LYS CD HD3 sing N N 364 LYS CE NZ sing N N 365 LYS CE HE2 sing N N 366 LYS CE HE3 sing N N 367 LYS NZ HZ1 sing N N 368 LYS NZ HZ2 sing N N 369 LYS NZ HZ3 sing N N 370 LYS OXT HXT sing N N 371 MET N CA sing N N 372 MET N H sing N N 373 MET N H2 sing N N 374 MET CA C sing N N 375 MET CA CB sing N N 376 MET CA HA sing N N 377 MET C O doub N N 378 MET C OXT sing N N 379 MET CB CG sing N N 380 MET CB HB2 sing N N 381 MET CB HB3 sing N N 382 MET CG SD sing N N 383 MET CG HG2 sing N N 384 MET CG HG3 sing N N 385 MET SD CE sing N N 386 MET CE HE1 sing N N 387 MET CE HE2 sing N N 388 MET CE HE3 sing N N 389 MET OXT HXT sing N N 390 PHE N CA sing N N 391 PHE N H sing N N 392 PHE N H2 sing N N 393 PHE CA C sing N N 394 PHE CA CB sing N N 395 PHE CA HA sing N N 396 PHE C O doub N N 397 PHE C OXT sing N N 398 PHE CB CG sing N N 399 PHE CB HB2 sing N N 400 PHE CB HB3 sing N N 401 PHE CG CD1 doub Y N 402 PHE CG CD2 sing Y N 403 PHE CD1 CE1 sing Y N 404 PHE CD1 HD1 sing N N 405 PHE CD2 CE2 doub Y N 406 PHE CD2 HD2 sing N N 407 PHE CE1 CZ doub Y N 408 PHE CE1 HE1 sing N N 409 PHE CE2 CZ sing Y N 410 PHE CE2 HE2 sing N N 411 PHE CZ HZ sing N N 412 PHE OXT HXT sing N N 413 PRO N CA sing N N 414 PRO N CD sing N N 415 PRO N H sing N N 416 PRO CA C sing N N 417 PRO CA CB sing N N 418 PRO CA HA sing N N 419 PRO C O doub N N 420 PRO C OXT sing N N 421 PRO CB CG sing N N 422 PRO CB HB2 sing N N 423 PRO CB HB3 sing N N 424 PRO CG CD sing N N 425 PRO CG HG2 sing N N 426 PRO CG HG3 sing N N 427 PRO CD HD2 sing N N 428 PRO CD HD3 sing N N 429 PRO OXT HXT sing N N 430 SER N CA sing N N 431 SER N H sing N N 432 SER N H2 sing N N 433 SER CA C sing N N 434 SER CA CB sing N N 435 SER CA HA sing N N 436 SER C O doub N N 437 SER C OXT sing N N 438 SER CB OG sing N N 439 SER CB HB2 sing N N 440 SER CB HB3 sing N N 441 SER OG HG sing N N 442 SER OXT HXT sing N N 443 THR N CA sing N N 444 THR N H sing N N 445 THR N H2 sing N N 446 THR CA C sing N N 447 THR CA CB sing N N 448 THR CA HA sing N N 449 THR C O doub N N 450 THR C OXT sing N N 451 THR CB OG1 sing N N 452 THR CB CG2 sing N N 453 THR CB HB sing N N 454 THR OG1 HG1 sing N N 455 THR CG2 HG21 sing N N 456 THR CG2 HG22 sing N N 457 THR CG2 HG23 sing N N 458 THR OXT HXT sing N N 459 TRP N CA sing N N 460 TRP N H sing N N 461 TRP N H2 sing N N 462 TRP CA C sing N N 463 TRP CA CB sing N N 464 TRP CA HA sing N N 465 TRP C O doub N N 466 TRP C OXT sing N N 467 TRP CB CG sing N N 468 TRP CB HB2 sing N N 469 TRP CB HB3 sing N N 470 TRP CG CD1 doub Y N 471 TRP CG CD2 sing Y N 472 TRP CD1 NE1 sing Y N 473 TRP CD1 HD1 sing N N 474 TRP CD2 CE2 doub Y N 475 TRP CD2 CE3 sing Y N 476 TRP NE1 CE2 sing Y N 477 TRP NE1 HE1 sing N N 478 TRP CE2 CZ2 sing Y N 479 TRP CE3 CZ3 doub Y N 480 TRP CE3 HE3 sing N N 481 TRP CZ2 CH2 doub Y N 482 TRP CZ2 HZ2 sing N N 483 TRP CZ3 CH2 sing Y N 484 TRP CZ3 HZ3 sing N N 485 TRP CH2 HH2 sing N N 486 TRP OXT HXT sing N N 487 TYR N CA sing N N 488 TYR N H sing N N 489 TYR N H2 sing N N 490 TYR CA C sing N N 491 TYR CA CB sing N N 492 TYR CA HA sing N N 493 TYR C O doub N N 494 TYR C OXT sing N N 495 TYR CB CG sing N N 496 TYR CB HB2 sing N N 497 TYR CB HB3 sing N N 498 TYR CG CD1 doub Y N 499 TYR CG CD2 sing Y N 500 TYR CD1 CE1 sing Y N 501 TYR CD1 HD1 sing N N 502 TYR CD2 CE2 doub Y N 503 TYR CD2 HD2 sing N N 504 TYR CE1 CZ doub Y N 505 TYR CE1 HE1 sing N N 506 TYR CE2 CZ sing Y N 507 TYR CE2 HE2 sing N N 508 TYR CZ OH sing N N 509 TYR OH HH sing N N 510 TYR OXT HXT sing N N 511 U OP3 P sing N N 512 U OP3 HOP3 sing N N 513 U P OP1 doub N N 514 U P OP2 sing N N 515 U P "O5'" sing N N 516 U OP2 HOP2 sing N N 517 U "O5'" "C5'" sing N N 518 U "C5'" "C4'" sing N N 519 U "C5'" "H5'" sing N N 520 U "C5'" "H5''" sing N N 521 U "C4'" "O4'" sing N N 522 U "C4'" "C3'" sing N N 523 U "C4'" "H4'" sing N N 524 U "O4'" "C1'" sing N N 525 U "C3'" "O3'" sing N N 526 U "C3'" "C2'" sing N N 527 U "C3'" "H3'" sing N N 528 U "O3'" "HO3'" sing N N 529 U "C2'" "O2'" sing N N 530 U "C2'" "C1'" sing N N 531 U "C2'" "H2'" sing N N 532 U "O2'" "HO2'" sing N N 533 U "C1'" N1 sing N N 534 U "C1'" "H1'" sing N N 535 U N1 C2 sing N N 536 U N1 C6 sing N N 537 U C2 O2 doub N N 538 U C2 N3 sing N N 539 U N3 C4 sing N N 540 U N3 H3 sing N N 541 U C4 O4 doub N N 542 U C4 C5 sing N N 543 U C5 C6 doub N N 544 U C5 H5 sing N N 545 U C6 H6 sing N N 546 VAL N CA sing N N 547 VAL N H sing N N 548 VAL N H2 sing N N 549 VAL CA C sing N N 550 VAL CA CB sing N N 551 VAL CA HA sing N N 552 VAL C O doub N N 553 VAL C OXT sing N N 554 VAL CB CG1 sing N N 555 VAL CB CG2 sing N N 556 VAL CB HB sing N N 557 VAL CG1 HG11 sing N N 558 VAL CG1 HG12 sing N N 559 VAL CG1 HG13 sing N N 560 VAL CG2 HG21 sing N N 561 VAL CG2 HG22 sing N N 562 VAL CG2 HG23 sing N N 563 VAL OXT HXT sing N N 564 # _ndb_struct_conf_na.entry_id 2XLJ _ndb_struct_conf_na.feature 'a-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 B C 1 1_555 B DG 15 1_555 0.073 -0.338 0.262 -7.706 -2.992 -6.639 1 B_C6:DG20_B B 6 ? B 20 ? 19 1 1 B U 2 1_555 B A 14 1_555 -0.187 -0.137 0.111 7.651 -5.665 7.851 2 B_U7:A19_B B 7 ? B 19 ? 20 1 1 B G 3 1_555 B C 13 1_555 -0.090 -0.253 0.185 8.900 -2.948 3.026 3 B_G8:C18_B B 8 ? B 18 ? 19 1 1 B C 4 1_555 B G 12 1_555 0.121 -0.200 -0.480 9.770 -8.295 -1.317 4 B_C9:G17_B B 9 ? B 17 ? 19 1 1 B C 5 1_555 B G 11 1_555 1.048 -0.188 -0.107 0.045 8.341 6.459 5 B_C10:G16_B B 10 ? B 16 ? 19 1 1 B G 6 1_555 B A 10 1_555 6.529 -5.105 0.685 19.118 11.055 0.623 6 B_G11:A15_B B 11 ? B 15 ? 11 10 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 B C 1 1_555 B DG 15 1_555 B U 2 1_555 B A 14 1_555 0.412 -1.408 2.801 -0.192 14.012 29.351 -4.399 -0.763 1.943 25.877 0.355 32.458 1 BB_C6U7:A19DG20_BB B 6 ? B 20 ? B 7 ? B 19 ? 1 B U 2 1_555 B A 14 1_555 B G 3 1_555 B C 13 1_555 0.531 -1.645 3.312 -2.490 1.511 29.486 -3.533 -1.560 3.171 2.960 4.878 29.626 2 BB_U7G8:C18A19_BB B 7 ? B 19 ? B 8 ? B 18 ? 1 B G 3 1_555 B C 13 1_555 B C 4 1_555 B G 12 1_555 -0.664 -2.491 3.147 1.303 -0.627 31.110 -4.525 1.477 3.165 -1.168 -2.429 31.143 3 BB_G8C9:G17C18_BB B 8 ? B 18 ? B 9 ? B 17 ? 1 B C 4 1_555 B G 12 1_555 B C 5 1_555 B G 11 1_555 -0.394 -2.575 3.631 -6.050 2.895 26.627 -6.200 -0.785 3.343 6.163 12.877 27.444 4 BB_C9C10:G16G17_BB B 9 ? B 17 ? B 10 ? B 16 ? 1 B C 5 1_555 B G 11 1_555 B G 6 1_555 B A 10 1_555 -0.598 -0.411 2.760 -2.044 7.112 57.037 -0.751 0.529 2.714 7.414 2.130 57.475 5 BB_C10G11:A15G16_BB B 10 ? B 16 ? B 11 ? B 15 ? # _pdbx_entity_nonpoly.entity_id 3 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 2XLI _pdbx_initial_refinement_model.details 'PDB ENTRY 2XLI' #