HEADER CHAPERONE 29-JUL-10 2XMV TITLE COPPER CHAPERONE ATX1 FROM SYNECHOCYSTIS PCC6803 (CU1, TRIMERIC FORM, TITLE 2 HIS61TYR MUTANT) COMPND MOL_ID: 1; COMPND 2 MOLECULE: SSR2857 PROTEIN; COMPND 3 CHAIN: A, B, C, D, E, F; COMPND 4 SYNONYM: ATX1; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SYNECHOCYSTIS SP. PCC 6803; SOURCE 3 ORGANISM_TAXID: 1148; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 6 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PET29A KEYWDS CHAPERONE, METALLOCHAPERONE, CU(I)-BINDING, CU(I)-CLUSTER, KEYWDS 2 TRAFFICKING EXPDTA X-RAY DIFFRACTION AUTHOR A.BADARAU,S.J.FIRBANK,A.A.MCCARTHY,M.J.BANFIELD,C.DENNISON REVDAT 3 20-DEC-23 2XMV 1 REMARK LINK REVDAT 2 25-APR-12 2XMV 1 JRNL REMARK VERSN REVDAT 1 18-AUG-10 2XMV 0 JRNL AUTH A.BADARAU,S.J.FIRBANK,A.A.MCCARTHY,M.J.BANFIELD,C.DENNISON JRNL TITL VISUALIZING THE METAL-BINDING VERSATILITY OF COPPER JRNL TITL 2 TRAFFICKING SITES . JRNL REF BIOCHEMISTRY V. 49 7798 2010 JRNL REFN ISSN 0006-2960 JRNL PMID 20726513 JRNL DOI 10.1021/BI101064W REMARK 2 REMARK 2 RESOLUTION. 1.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0102 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.97 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 98.8 REMARK 3 NUMBER OF REFLECTIONS : 29712 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.194 REMARK 3 R VALUE (WORKING SET) : 0.191 REMARK 3 FREE R VALUE : 0.253 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1566 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.80 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.85 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2154 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.31 REMARK 3 BIN R VALUE (WORKING SET) : 0.2620 REMARK 3 BIN FREE R VALUE SET COUNT : 134 REMARK 3 BIN FREE R VALUE : 0.3330 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2689 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 8 REMARK 3 SOLVENT ATOMS : 254 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 12.92 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.13000 REMARK 3 B22 (A**2) : -0.07000 REMARK 3 B33 (A**2) : 0.20000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.143 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.147 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.101 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 3.248 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.941 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.896 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2713 ; 0.017 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 1594 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3720 ; 1.466 ; 1.968 REMARK 3 BOND ANGLES OTHERS (DEGREES): 4024 ; 0.987 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 380 ; 5.817 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 90 ;39.220 ;28.000 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 444 ;11.894 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 6 ; 9.193 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 514 ; 0.086 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3052 ; 0.006 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 418 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1896 ; 0.989 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 760 ; 0.291 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3065 ; 1.768 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 817 ; 2.872 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 651 ; 5.172 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS. U VALUES REFINED INDIVIDUALLY. REMARK 4 REMARK 4 2XMV COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 29-JUL-10. REMARK 100 THE DEPOSITION ID IS D_1290044868. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I02 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.38 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 31381 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.800 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.3 REMARK 200 DATA REDUNDANCY : 4.800 REMARK 200 R MERGE (I) : 0.11000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 29.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.90 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.5 REMARK 200 DATA REDUNDANCY IN SHELL : 4.90 REMARK 200 R MERGE FOR SHELL (I) : 0.36000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 13.10 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 2XMJ REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 40.42 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.06 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 2.1 M D,L-MALIC ACID AT PH 7.0 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 23.84500 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 45.25000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 38.55000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 45.25000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 23.84500 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 38.55000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: HEXAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: HEXAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4910 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 17750 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -143.7 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D, E, F REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 400 REMARK 400 COMPOUND REMARK 400 ENGINEERED RESIDUE IN CHAIN A, HIS 61 TO TYR REMARK 400 ENGINEERED RESIDUE IN CHAIN B, HIS 61 TO TYR REMARK 400 ENGINEERED RESIDUE IN CHAIN C, HIS 61 TO TYR REMARK 400 ENGINEERED RESIDUE IN CHAIN D, HIS 61 TO TYR REMARK 400 ENGINEERED RESIDUE IN CHAIN E, HIS 61 TO TYR REMARK 400 ENGINEERED RESIDUE IN CHAIN F, HIS 61 TO TYR REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 MET B 1 REMARK 465 MET C 1 REMARK 465 MET D 1 REMARK 465 MET E 1 REMARK 465 MET F 1 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLN A 33 CG CD OE1 NE2 REMARK 470 LYS B 21 CD CE NZ REMARK 470 GLU B 62 CG CD OE1 OE2 REMARK 470 LYS C 21 CD CE NZ REMARK 470 GLN C 33 CD OE1 NE2 REMARK 470 LYS C 40 CG CD REMARK 470 GLU C 50 CG CD OE1 OE2 REMARK 470 GLU C 64 CD OE1 OE2 REMARK 470 GLN D 33 CG CD OE1 NE2 REMARK 470 GLU D 62 CG CD OE1 OE2 REMARK 470 LYS E 21 CG CD CE NZ REMARK 470 GLN E 33 CG CD OE1 NE2 REMARK 470 GLU E 50 CG CD OE1 OE2 REMARK 470 GLN E 51 CG CD OE1 NE2 REMARK 470 GLU F 17 CG CD OE1 OE2 REMARK 470 LYS F 21 CG CD CE NZ REMARK 470 GLU F 62 CG CD OE1 OE2 REMARK 470 GLU F 64 CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OE1 GLN D 29 O HOH D 2017 1.96 REMARK 500 OG1 THR B 31 OG1 THR B 44 2.13 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS E 39 32.69 70.64 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CU1 A1065 CU REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 12 SG REMARK 620 2 CYS A 15 SG 142.2 REMARK 620 3 CU1 A1066 CU 58.3 159.1 REMARK 620 4 CYS C 12 SG 111.6 105.8 55.0 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CU1 A1066 CU REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 12 SG REMARK 620 2 HOH A2011 O 106.7 REMARK 620 3 CYS B 12 SG 110.5 109.2 REMARK 620 4 CU1 B1065 CU 59.8 110.8 52.4 REMARK 620 5 CYS C 12 SG 108.5 111.5 110.3 137.6 REMARK 620 6 CU1 C1065 CU 138.9 114.3 58.3 105.6 54.1 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CU1 B1065 CU REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 12 SG REMARK 620 2 CYS B 12 SG 113.0 REMARK 620 3 CYS B 15 SG 103.5 143.0 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CU1 C1065 CU REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS B 12 SG REMARK 620 2 CYS C 12 SG 116.6 REMARK 620 3 CYS C 15 SG 103.8 139.1 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CU1 D1065 CU REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS D 12 SG REMARK 620 2 CYS D 15 SG 139.6 REMARK 620 3 CU1 D1066 CU 59.2 160.5 REMARK 620 4 CYS F 12 SG 114.4 105.7 56.9 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CU1 D1066 CU REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS D 12 SG REMARK 620 2 HOH D2008 O 109.5 REMARK 620 3 CYS E 12 SG 110.0 108.4 REMARK 620 4 CU1 E1065 CU 58.9 112.0 53.0 REMARK 620 5 CYS F 12 SG 108.6 110.5 109.8 137.4 REMARK 620 6 CU1 F1065 CU 135.9 114.5 57.1 104.0 54.2 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CU1 E1065 CU REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS D 12 SG REMARK 620 2 CYS E 12 SG 116.9 REMARK 620 3 CYS E 15 SG 101.1 141.5 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CU1 F1065 CU REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS E 12 SG REMARK 620 2 CYS F 12 SG 114.5 REMARK 620 3 CYS F 15 SG 101.8 143.5 REMARK 620 N 1 2 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CU1 A 1065 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CU1 A 1066 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CU1 B 1065 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CU1 C 1065 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CU1 D 1065 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CU1 D 1066 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CU1 E 1065 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CU1 F 1065 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1SB6 RELATED DB: PDB REMARK 900 SOLUTION STRUCTURE OF A CYANOBACTERIAL COPPERMETALLOCHAPERONE, REMARK 900 SCATX1 REMARK 900 RELATED ID: 2XMT RELATED DB: PDB REMARK 900 COPPER CHAPERONE ATX1 FROM SYNECHOCYSTIS PCC6803 (CU1 FORM) REMARK 900 RELATED ID: 2XMM RELATED DB: PDB REMARK 900 VISUALISING THE METAL-BINDING VERSATILITY OF COPPER TRAFFICKING REMARK 900 SITES: H61Y ATX1 SIDE-TO -SIDE REMARK 900 RELATED ID: 2XMK RELATED DB: PDB REMARK 900 VISUALISING THE METAL-BINDING VERSATILITY OF COPPER TRAFFICKING REMARK 900 SITES: ATX1 SIDE-TO-SIDE (ANAEROBIC) REMARK 900 RELATED ID: 2XMJ RELATED DB: PDB REMARK 900 VISUALISING THE METAL-BINDING VERSATILITY OF COPPER TRAFFICKING REMARK 900 SITES: ATX1 SIDE-TO-SIDE (AEROBIC) REMARK 900 RELATED ID: 2XMU RELATED DB: PDB REMARK 900 COPPER CHAPERONE ATX1 FROM SYNECHOCYSTIS PCC6803 (CU2 FORM) DBREF 2XMV A 1 64 UNP P73213 P73213_SYNY3 1 64 DBREF 2XMV B 1 64 UNP P73213 P73213_SYNY3 1 64 DBREF 2XMV C 1 64 UNP P73213 P73213_SYNY3 1 64 DBREF 2XMV D 1 64 UNP P73213 P73213_SYNY3 1 64 DBREF 2XMV E 1 64 UNP P73213 P73213_SYNY3 1 64 DBREF 2XMV F 1 64 UNP P73213 P73213_SYNY3 1 64 SEQADV 2XMV TYR A 61 UNP P73213 HIS 61 ENGINEERED MUTATION SEQADV 2XMV TYR B 61 UNP P73213 HIS 61 ENGINEERED MUTATION SEQADV 2XMV TYR C 61 UNP P73213 HIS 61 ENGINEERED MUTATION SEQADV 2XMV TYR D 61 UNP P73213 HIS 61 ENGINEERED MUTATION SEQADV 2XMV TYR E 61 UNP P73213 HIS 61 ENGINEERED MUTATION SEQADV 2XMV TYR F 61 UNP P73213 HIS 61 ENGINEERED MUTATION SEQRES 1 A 64 MET THR ILE GLN LEU THR VAL PRO THR ILE ALA CYS GLU SEQRES 2 A 64 ALA CYS ALA GLU ALA VAL THR LYS ALA VAL GLN ASN GLU SEQRES 3 A 64 ASP ALA GLN ALA THR VAL GLN VAL ASP LEU THR SER LYS SEQRES 4 A 64 LYS VAL THR ILE THR SER ALA LEU GLY GLU GLU GLN LEU SEQRES 5 A 64 ARG THR ALA ILE ALA SER ALA GLY TYR GLU VAL GLU SEQRES 1 B 64 MET THR ILE GLN LEU THR VAL PRO THR ILE ALA CYS GLU SEQRES 2 B 64 ALA CYS ALA GLU ALA VAL THR LYS ALA VAL GLN ASN GLU SEQRES 3 B 64 ASP ALA GLN ALA THR VAL GLN VAL ASP LEU THR SER LYS SEQRES 4 B 64 LYS VAL THR ILE THR SER ALA LEU GLY GLU GLU GLN LEU SEQRES 5 B 64 ARG THR ALA ILE ALA SER ALA GLY TYR GLU VAL GLU SEQRES 1 C 64 MET THR ILE GLN LEU THR VAL PRO THR ILE ALA CYS GLU SEQRES 2 C 64 ALA CYS ALA GLU ALA VAL THR LYS ALA VAL GLN ASN GLU SEQRES 3 C 64 ASP ALA GLN ALA THR VAL GLN VAL ASP LEU THR SER LYS SEQRES 4 C 64 LYS VAL THR ILE THR SER ALA LEU GLY GLU GLU GLN LEU SEQRES 5 C 64 ARG THR ALA ILE ALA SER ALA GLY TYR GLU VAL GLU SEQRES 1 D 64 MET THR ILE GLN LEU THR VAL PRO THR ILE ALA CYS GLU SEQRES 2 D 64 ALA CYS ALA GLU ALA VAL THR LYS ALA VAL GLN ASN GLU SEQRES 3 D 64 ASP ALA GLN ALA THR VAL GLN VAL ASP LEU THR SER LYS SEQRES 4 D 64 LYS VAL THR ILE THR SER ALA LEU GLY GLU GLU GLN LEU SEQRES 5 D 64 ARG THR ALA ILE ALA SER ALA GLY TYR GLU VAL GLU SEQRES 1 E 64 MET THR ILE GLN LEU THR VAL PRO THR ILE ALA CYS GLU SEQRES 2 E 64 ALA CYS ALA GLU ALA VAL THR LYS ALA VAL GLN ASN GLU SEQRES 3 E 64 ASP ALA GLN ALA THR VAL GLN VAL ASP LEU THR SER LYS SEQRES 4 E 64 LYS VAL THR ILE THR SER ALA LEU GLY GLU GLU GLN LEU SEQRES 5 E 64 ARG THR ALA ILE ALA SER ALA GLY TYR GLU VAL GLU SEQRES 1 F 64 MET THR ILE GLN LEU THR VAL PRO THR ILE ALA CYS GLU SEQRES 2 F 64 ALA CYS ALA GLU ALA VAL THR LYS ALA VAL GLN ASN GLU SEQRES 3 F 64 ASP ALA GLN ALA THR VAL GLN VAL ASP LEU THR SER LYS SEQRES 4 F 64 LYS VAL THR ILE THR SER ALA LEU GLY GLU GLU GLN LEU SEQRES 5 F 64 ARG THR ALA ILE ALA SER ALA GLY TYR GLU VAL GLU HET CU1 A1065 1 HET CU1 A1066 1 HET CU1 B1065 1 HET CU1 C1065 1 HET CU1 D1065 1 HET CU1 D1066 1 HET CU1 E1065 1 HET CU1 F1065 1 HETNAM CU1 COPPER (I) ION FORMUL 7 CU1 8(CU 1+) FORMUL 15 HOH *254(H2 O) HELIX 1 1 CYS A 12 ASP A 27 1 16 HELIX 2 2 GLY A 48 ALA A 59 1 12 HELIX 3 3 CYS B 12 ASN B 25 1 14 HELIX 4 4 GLY B 48 ALA B 59 1 12 HELIX 5 5 CYS C 12 ASP C 27 1 16 HELIX 6 6 GLY C 48 ALA C 59 1 12 HELIX 7 7 CYS D 12 ASP D 27 1 16 HELIX 8 8 GLY D 48 ALA D 59 1 12 HELIX 9 9 CYS E 12 ASN E 25 1 14 HELIX 10 10 GLY E 48 ALA E 59 1 12 HELIX 11 11 CYS F 12 ASN F 25 1 14 HELIX 12 12 GLY F 48 ALA F 59 1 12 SHEET 1 AA 3 ILE A 3 THR A 6 0 SHEET 2 AA 3 LYS A 40 THR A 44 -1 O VAL A 41 N LEU A 5 SHEET 3 AA 3 THR A 31 ASP A 35 -1 O THR A 31 N THR A 44 SHEET 1 BA 3 ILE B 3 THR B 6 0 SHEET 2 BA 3 LYS B 40 THR B 44 -1 O VAL B 41 N LEU B 5 SHEET 3 BA 3 THR B 31 ASP B 35 -1 O THR B 31 N THR B 44 SHEET 1 CA 3 ILE C 3 THR C 6 0 SHEET 2 CA 3 LYS C 40 THR C 44 -1 O VAL C 41 N LEU C 5 SHEET 3 CA 3 THR C 31 ASP C 35 -1 O THR C 31 N THR C 44 SHEET 1 DA 3 ILE D 3 THR D 6 0 SHEET 2 DA 3 LYS D 40 THR D 44 -1 O VAL D 41 N LEU D 5 SHEET 3 DA 3 THR D 31 ASP D 35 -1 O THR D 31 N THR D 44 SHEET 1 EA 3 ILE E 3 THR E 6 0 SHEET 2 EA 3 LYS E 40 THR E 44 -1 O VAL E 41 N LEU E 5 SHEET 3 EA 3 THR E 31 ASP E 35 -1 O THR E 31 N THR E 44 SHEET 1 FA 3 ILE F 3 THR F 6 0 SHEET 2 FA 3 LYS F 40 THR F 44 -1 O VAL F 41 N LEU F 5 SHEET 3 FA 3 THR F 31 ASP F 35 -1 O THR F 31 N THR F 44 LINK SG CYS A 12 CU CU1 A1065 1555 1555 2.24 LINK SG CYS A 12 CU CU1 A1066 1555 1555 2.40 LINK SG CYS A 12 CU CU1 B1065 1555 1555 2.50 LINK SG CYS A 15 CU CU1 A1065 1555 1555 2.21 LINK CU CU1 A1065 CU CU1 A1066 1555 1555 2.65 LINK CU CU1 A1065 SG CYS C 12 1555 1555 2.43 LINK CU CU1 A1066 O HOH A2011 1555 1555 2.23 LINK CU CU1 A1066 SG CYS B 12 1555 1555 2.37 LINK CU CU1 A1066 CU CU1 B1065 1555 1555 2.59 LINK CU CU1 A1066 SG CYS C 12 1555 1555 2.36 LINK CU CU1 A1066 CU CU1 C1065 1555 1555 2.47 LINK SG CYS B 12 CU CU1 B1065 1555 1555 2.20 LINK SG CYS B 12 CU CU1 C1065 1555 1555 2.36 LINK SG CYS B 15 CU CU1 B1065 1555 1555 2.17 LINK SG CYS C 12 CU CU1 C1065 1555 1555 2.20 LINK SG CYS C 15 CU CU1 C1065 1555 1555 2.24 LINK SG CYS D 12 CU CU1 D1065 1555 1555 2.24 LINK SG CYS D 12 CU CU1 D1066 1555 1555 2.40 LINK SG CYS D 12 CU CU1 E1065 1555 1555 2.43 LINK SG CYS D 15 CU CU1 D1065 1555 1555 2.16 LINK CU CU1 D1065 CU CU1 D1066 1555 1555 2.57 LINK CU CU1 D1065 SG CYS F 12 1555 1555 2.35 LINK CU CU1 D1066 O HOH D2008 1555 1555 2.25 LINK CU CU1 D1066 SG CYS E 12 1555 1555 2.44 LINK CU CU1 D1066 CU CU1 E1065 1555 1555 2.53 LINK CU CU1 D1066 SG CYS F 12 1555 1555 2.35 LINK CU CU1 D1066 CU CU1 F1065 1555 1555 2.58 LINK SG CYS E 12 CU CU1 E1065 1555 1555 2.22 LINK SG CYS E 12 CU CU1 F1065 1555 1555 2.40 LINK SG CYS E 15 CU CU1 E1065 1555 1555 2.29 LINK SG CYS F 12 CU CU1 F1065 1555 1555 2.26 LINK SG CYS F 15 CU CU1 F1065 1555 1555 2.21 SITE 1 AC1 4 CYS A 12 CYS A 15 CU1 A1066 CYS C 12 SITE 1 AC2 7 CYS A 12 CU1 A1065 HOH A2011 CYS B 12 SITE 2 AC2 7 CU1 B1065 CYS C 12 CU1 C1065 SITE 1 AC3 4 CYS A 12 CU1 A1066 CYS B 12 CYS B 15 SITE 1 AC4 4 CU1 A1066 CYS B 12 CYS C 12 CYS C 15 SITE 1 AC5 4 CYS D 12 CYS D 15 CU1 D1066 CYS F 12 SITE 1 AC6 7 CYS D 12 CU1 D1065 HOH D2008 CYS E 12 SITE 2 AC6 7 CU1 E1065 CYS F 12 CU1 F1065 SITE 1 AC7 4 CYS D 12 CU1 D1066 CYS E 12 CYS E 15 SITE 1 AC8 4 CU1 D1066 CYS E 12 CYS F 12 CYS F 15 CRYST1 47.690 77.100 90.500 90.00 90.00 90.00 P 21 21 21 24 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.020969 0.000000 0.000000 0.00000 SCALE2 0.000000 0.012970 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011050 0.00000