data_2Y8D # _entry.id 2Y8D # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.383 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2Y8D pdb_00002y8d 10.2210/pdb2y8d/pdb PDBE EBI-47259 ? ? WWPDB D_1290047259 ? ? # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 2Y8D _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.SG_entry . _pdbx_database_status.recvd_initial_deposition_date 2011-02-04 _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Gangnard, S.' 1 'Ramboarina, S.' 2 'Lewit-Bentley, A.' 3 'Bentley, G.A.' 4 # _citation.id primary _citation.title ;Structural and Immunological Correlations between the Variable Blocks of the Var2Csa Domain Dbl6Epsilon from Two Plasmodium Falciparum Parasite Lines. ; _citation.journal_abbrev J.Mol.Biol. _citation.journal_volume 425 _citation.page_first 1697 _citation.page_last ? _citation.year 2013 _citation.journal_id_ASTM JMOBAK _citation.country UK _citation.journal_id_ISSN 0022-2836 _citation.journal_id_CSD 0070 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 23429057 _citation.pdbx_database_id_DOI 10.1016/J.JMB.2013.02.014 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Gangnard, S.' 1 ? primary 'Badaut, C.' 2 ? primary 'Ramboarina, S.' 3 ? primary 'Baron, B.' 4 ? primary 'Ramdani, T.' 5 ? primary 'Gamain, B.' 6 ? primary 'Deloron, P.' 7 ? primary 'Lewit-Bentley, A.' 8 ? primary 'Bentley, G.A.' 9 ? # _cell.entry_id 2Y8D _cell.length_a 85.859 _cell.length_b 56.229 _cell.length_c 75.849 _cell.angle_alpha 90.00 _cell.angle_beta 123.09 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2Y8D _symmetry.space_group_name_H-M 'C 1 2 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'ERYTHROCYTE MEMBRANE PROTEIN 1' 36268.898 1 ? ? 'DBL6 EPSILON, RESIDUES 2326-2631' ? 2 non-polymer syn 2-AMINO-ETHANETHIOL 77.149 2 ? ? ? ? 3 non-polymer syn BENZAMIDINE 120.152 1 ? ? ? ? 4 water nat water 18.015 112 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GNDYICNKYKNIHDRMKKNNGNFVTDNFVKKSWEISNGVLIPPRRKNLFLYIDPSKICEYKKDPKLFKDFIYWSAFTEVE RLKKAYGGARAKVVHAMKYSFTDIGSIIKGDDMMEKNSSDKIGKILGDTDGQNEKRKKWWDMNKYHIWESMLCGYREAEG DTETNENCRFPDIESVPQFLRWFQEWSENFCDRRQKLYDKLNSECISAECTNGSVDNSKCTHACVNYKNYILTKKTEYEI QTNKYDNEFKNKNSNDKDAPDYLKEKCNDNKCECLNKHIDDKNKTWKNPYETLEDTFKSKCDCPKP ; _entity_poly.pdbx_seq_one_letter_code_can ;GNDYICNKYKNIHDRMKKNNGNFVTDNFVKKSWEISNGVLIPPRRKNLFLYIDPSKICEYKKDPKLFKDFIYWSAFTEVE RLKKAYGGARAKVVHAMKYSFTDIGSIIKGDDMMEKNSSDKIGKILGDTDGQNEKRKKWWDMNKYHIWESMLCGYREAEG DTETNENCRFPDIESVPQFLRWFQEWSENFCDRRQKLYDKLNSECISAECTNGSVDNSKCTHACVNYKNYILTKKTEYEI QTNKYDNEFKNKNSNDKDAPDYLKEKCNDNKCECLNKHIDDKNKTWKNPYETLEDTFKSKCDCPKP ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 ASN n 1 3 ASP n 1 4 TYR n 1 5 ILE n 1 6 CYS n 1 7 ASN n 1 8 LYS n 1 9 TYR n 1 10 LYS n 1 11 ASN n 1 12 ILE n 1 13 HIS n 1 14 ASP n 1 15 ARG n 1 16 MET n 1 17 LYS n 1 18 LYS n 1 19 ASN n 1 20 ASN n 1 21 GLY n 1 22 ASN n 1 23 PHE n 1 24 VAL n 1 25 THR n 1 26 ASP n 1 27 ASN n 1 28 PHE n 1 29 VAL n 1 30 LYS n 1 31 LYS n 1 32 SER n 1 33 TRP n 1 34 GLU n 1 35 ILE n 1 36 SER n 1 37 ASN n 1 38 GLY n 1 39 VAL n 1 40 LEU n 1 41 ILE n 1 42 PRO n 1 43 PRO n 1 44 ARG n 1 45 ARG n 1 46 LYS n 1 47 ASN n 1 48 LEU n 1 49 PHE n 1 50 LEU n 1 51 TYR n 1 52 ILE n 1 53 ASP n 1 54 PRO n 1 55 SER n 1 56 LYS n 1 57 ILE n 1 58 CYS n 1 59 GLU n 1 60 TYR n 1 61 LYS n 1 62 LYS n 1 63 ASP n 1 64 PRO n 1 65 LYS n 1 66 LEU n 1 67 PHE n 1 68 LYS n 1 69 ASP n 1 70 PHE n 1 71 ILE n 1 72 TYR n 1 73 TRP n 1 74 SER n 1 75 ALA n 1 76 PHE n 1 77 THR n 1 78 GLU n 1 79 VAL n 1 80 GLU n 1 81 ARG n 1 82 LEU n 1 83 LYS n 1 84 LYS n 1 85 ALA n 1 86 TYR n 1 87 GLY n 1 88 GLY n 1 89 ALA n 1 90 ARG n 1 91 ALA n 1 92 LYS n 1 93 VAL n 1 94 VAL n 1 95 HIS n 1 96 ALA n 1 97 MET n 1 98 LYS n 1 99 TYR n 1 100 SER n 1 101 PHE n 1 102 THR n 1 103 ASP n 1 104 ILE n 1 105 GLY n 1 106 SER n 1 107 ILE n 1 108 ILE n 1 109 LYS n 1 110 GLY n 1 111 ASP n 1 112 ASP n 1 113 MET n 1 114 MET n 1 115 GLU n 1 116 LYS n 1 117 ASN n 1 118 SER n 1 119 SER n 1 120 ASP n 1 121 LYS n 1 122 ILE n 1 123 GLY n 1 124 LYS n 1 125 ILE n 1 126 LEU n 1 127 GLY n 1 128 ASP n 1 129 THR n 1 130 ASP n 1 131 GLY n 1 132 GLN n 1 133 ASN n 1 134 GLU n 1 135 LYS n 1 136 ARG n 1 137 LYS n 1 138 LYS n 1 139 TRP n 1 140 TRP n 1 141 ASP n 1 142 MET n 1 143 ASN n 1 144 LYS n 1 145 TYR n 1 146 HIS n 1 147 ILE n 1 148 TRP n 1 149 GLU n 1 150 SER n 1 151 MET n 1 152 LEU n 1 153 CYS n 1 154 GLY n 1 155 TYR n 1 156 ARG n 1 157 GLU n 1 158 ALA n 1 159 GLU n 1 160 GLY n 1 161 ASP n 1 162 THR n 1 163 GLU n 1 164 THR n 1 165 ASN n 1 166 GLU n 1 167 ASN n 1 168 CYS n 1 169 ARG n 1 170 PHE n 1 171 PRO n 1 172 ASP n 1 173 ILE n 1 174 GLU n 1 175 SER n 1 176 VAL n 1 177 PRO n 1 178 GLN n 1 179 PHE n 1 180 LEU n 1 181 ARG n 1 182 TRP n 1 183 PHE n 1 184 GLN n 1 185 GLU n 1 186 TRP n 1 187 SER n 1 188 GLU n 1 189 ASN n 1 190 PHE n 1 191 CYS n 1 192 ASP n 1 193 ARG n 1 194 ARG n 1 195 GLN n 1 196 LYS n 1 197 LEU n 1 198 TYR n 1 199 ASP n 1 200 LYS n 1 201 LEU n 1 202 ASN n 1 203 SER n 1 204 GLU n 1 205 CYS n 1 206 ILE n 1 207 SER n 1 208 ALA n 1 209 GLU n 1 210 CYS n 1 211 THR n 1 212 ASN n 1 213 GLY n 1 214 SER n 1 215 VAL n 1 216 ASP n 1 217 ASN n 1 218 SER n 1 219 LYS n 1 220 CYS n 1 221 THR n 1 222 HIS n 1 223 ALA n 1 224 CYS n 1 225 VAL n 1 226 ASN n 1 227 TYR n 1 228 LYS n 1 229 ASN n 1 230 TYR n 1 231 ILE n 1 232 LEU n 1 233 THR n 1 234 LYS n 1 235 LYS n 1 236 THR n 1 237 GLU n 1 238 TYR n 1 239 GLU n 1 240 ILE n 1 241 GLN n 1 242 THR n 1 243 ASN n 1 244 LYS n 1 245 TYR n 1 246 ASP n 1 247 ASN n 1 248 GLU n 1 249 PHE n 1 250 LYS n 1 251 ASN n 1 252 LYS n 1 253 ASN n 1 254 SER n 1 255 ASN n 1 256 ASP n 1 257 LYS n 1 258 ASP n 1 259 ALA n 1 260 PRO n 1 261 ASP n 1 262 TYR n 1 263 LEU n 1 264 LYS n 1 265 GLU n 1 266 LYS n 1 267 CYS n 1 268 ASN n 1 269 ASP n 1 270 ASN n 1 271 LYS n 1 272 CYS n 1 273 GLU n 1 274 CYS n 1 275 LEU n 1 276 ASN n 1 277 LYS n 1 278 HIS n 1 279 ILE n 1 280 ASP n 1 281 ASP n 1 282 LYS n 1 283 ASN n 1 284 LYS n 1 285 THR n 1 286 TRP n 1 287 LYS n 1 288 ASN n 1 289 PRO n 1 290 TYR n 1 291 GLU n 1 292 THR n 1 293 LEU n 1 294 GLU n 1 295 ASP n 1 296 THR n 1 297 PHE n 1 298 LYS n 1 299 SER n 1 300 LYS n 1 301 CYS n 1 302 ASP n 1 303 CYS n 1 304 PRO n 1 305 LYS n 1 306 PRO n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain FCR3 _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'PLASMODIUM FALCIPARUM' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 5833 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'ESCHERICHIA COLI' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain SHUFFLE _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type PLASMID _entity_src_gen.pdbx_host_org_vector PET15B _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q6UDW7_PLAFA _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin ? _struct_ref.pdbx_db_accession Q6UDW7 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 2Y8D _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 306 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q6UDW7 _struct_ref_seq.db_align_beg 2326 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 2631 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 2326 _struct_ref_seq.pdbx_auth_seq_align_end 2631 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 BEN non-polymer . BENZAMIDINE ? 'C7 H8 N2' 120.152 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DHL 'L-peptide linking' . 2-AMINO-ETHANETHIOL 2,3-DESHYDROLANTHIONINE 'C2 H7 N S' 77.149 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 2Y8D _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.22 _exptl_crystal.density_percent_sol 44.13 _exptl_crystal.description NONE # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION' _exptl_crystal_grow.temp ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH ? _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details ;30% PEG 4000, 0.1M NA ACETATE, PH 4.8, 0.1M MGCL2, 2.6% BENZAMIDINE, 10MG/ML PROTEIN IN 0.02M TRIS PH 8, 0.14M NACL, 0.045M CYSTAMINE; VAPOUR DIFFUSION ; # _diffrn.id 1 _diffrn.ambient_temp 180 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 315r' _diffrn_detector.pdbx_collection_date 2010-05-22 _diffrn_detector.details KB-MIRRORS # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'CHANNEL-CUT SI (111) CRYSTAL' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9801 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'SOLEIL BEAMLINE PROXIMA 1' _diffrn_source.pdbx_synchrotron_site SOLEIL _diffrn_source.pdbx_synchrotron_beamline 'PROXIMA 1' _diffrn_source.pdbx_wavelength 0.9801 _diffrn_source.pdbx_wavelength_list ? # _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.entry_id 2Y8D _reflns.observed_criterion_sigma_I 0.0 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 35.20 _reflns.d_resolution_high 1.84 _reflns.number_obs 24727 _reflns.number_all ? _reflns.percent_possible_obs 93.6 _reflns.pdbx_Rmerge_I_obs 0.06 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 12.40 _reflns.B_iso_Wilson_estimate 38.74 _reflns.pdbx_redundancy 3.4 # _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_ordinal 1 _reflns_shell.d_res_high 1.84 _reflns_shell.d_res_low 1.87 _reflns_shell.percent_possible_all 73.7 _reflns_shell.Rmerge_I_obs 1.00 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 0.60 _reflns_shell.pdbx_redundancy 2.1 # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 2Y8D _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 24727 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 43.92 _refine.ls_d_res_high 1.84 _refine.ls_percent_reflns_obs 93.55 _refine.ls_R_factor_obs 0.2051 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.2034 _refine.ls_R_factor_R_free 0.2352 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.12 _refine.ls_number_reflns_R_free 1267 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.9527 _refine.correlation_coeff_Fo_to_Fc_free 0.9375 _refine.B_iso_mean 53.84 _refine.aniso_B[1][1] -2.3029 _refine.aniso_B[2][2] 0.8351 _refine.aniso_B[3][3] 1.4679 _refine.aniso_B[1][2] 0.0000 _refine.aniso_B[1][3] -0.2318 _refine.aniso_B[2][3] 0.0000 _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ? _refine.pdbx_starting_model 'PDB ENTRY 2WAU' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.pdbx_overall_phase_error ? _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI 0.155 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI 0.139 _refine.pdbx_overall_SU_R_Blow_DPI 0.155 _refine.pdbx_overall_SU_R_free_Blow_DPI 0.138 # _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_analyze.entry_id 2Y8D _refine_analyze.Luzzati_coordinate_error_obs 0.271 _refine_analyze.Luzzati_sigma_a_obs ? _refine_analyze.Luzzati_d_res_low_obs ? _refine_analyze.Luzzati_coordinate_error_free ? _refine_analyze.Luzzati_sigma_a_free ? _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.occupancy_sum_non_hydrogen ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2317 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 17 _refine_hist.number_atoms_solvent 112 _refine_hist.number_atoms_total 2446 _refine_hist.d_res_high 1.84 _refine_hist.d_res_low 43.92 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function t_bond_d 0.011 ? 2.00 2413 'X-RAY DIFFRACTION' HARMONIC t_angle_deg 1.05 ? 2.00 3236 'X-RAY DIFFRACTION' HARMONIC t_dihedral_angle_d ? ? 2.00 884 'X-RAY DIFFRACTION' SINUSOIDAL t_incorr_chiral_ct ? ? ? ? 'X-RAY DIFFRACTION' ? t_pseud_angle ? ? ? ? 'X-RAY DIFFRACTION' ? t_trig_c_planes ? ? 2.00 76 'X-RAY DIFFRACTION' HARMONIC t_gen_planes ? ? 5.00 331 'X-RAY DIFFRACTION' HARMONIC t_it ? ? 20.00 2413 'X-RAY DIFFRACTION' HARMONIC t_nbd ? ? ? ? 'X-RAY DIFFRACTION' ? t_omega_torsion 2.72 ? ? ? 'X-RAY DIFFRACTION' ? t_other_torsion 21.68 ? ? ? 'X-RAY DIFFRACTION' ? t_improper_torsion ? ? ? ? 'X-RAY DIFFRACTION' ? t_chiral_improper_torsion ? ? 5.00 299 'X-RAY DIFFRACTION' SEMIHARMONIC t_sum_occupancies ? ? ? ? 'X-RAY DIFFRACTION' ? t_utility_distance ? ? ? ? 'X-RAY DIFFRACTION' ? t_utility_angle ? ? ? ? 'X-RAY DIFFRACTION' ? t_utility_torsion ? ? ? ? 'X-RAY DIFFRACTION' ? t_ideal_dist_contact ? ? 4.00 2917 'X-RAY DIFFRACTION' SEMIHARMONIC # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.pdbx_total_number_of_bins_used 12 _refine_ls_shell.d_res_high 1.84 _refine_ls_shell.d_res_low 1.92 _refine_ls_shell.number_reflns_R_work 1848 _refine_ls_shell.R_factor_R_work 0.2358 _refine_ls_shell.percent_reflns_obs 93.55 _refine_ls_shell.R_factor_R_free 0.2266 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free 5.38 _refine_ls_shell.number_reflns_R_free 105 _refine_ls_shell.number_reflns_all 1953 _refine_ls_shell.R_factor_all 0.2353 # _struct.entry_id 2Y8D _struct.title 'STRUCTURE OF DBL6 EPSILON DOMAIN FROM VAR2CSA STRAIN FCR3' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2Y8D _struct_keywords.pdbx_keywords 'MEMBRANE PROTEIN' _struct_keywords.text 'MEMBRANE PROTEIN, DBL EPSILON, PFEMP1, MALARIA' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 2 ? D N N 3 ? E N N 4 ? # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ILE A 5 ? ASN A 20 ? ILE A 2330 ASN A 2345 1 ? 16 HELX_P HELX_P2 2 ASN A 27 ? LYS A 31 ? ASN A 2352 LYS A 2356 5 ? 5 HELX_P HELX_P3 3 ASP A 53 ? SER A 55 ? ASP A 2378 SER A 2380 5 ? 3 HELX_P HELX_P4 4 LYS A 56 ? ASP A 63 ? LYS A 2381 ASP A 2388 1 ? 8 HELX_P HELX_P5 5 ASP A 63 ? TYR A 86 ? ASP A 2388 TYR A 2411 1 ? 24 HELX_P HELX_P6 6 ALA A 89 ? GLY A 110 ? ALA A 2414 GLY A 2435 1 ? 22 HELX_P HELX_P7 7 LYS A 116 ? LEU A 126 ? LYS A 2441 LEU A 2451 1 ? 11 HELX_P HELX_P8 8 ASN A 133 ? GLU A 159 ? ASN A 2458 GLU A 2484 1 ? 27 HELX_P HELX_P9 9 PRO A 171 ? VAL A 176 ? PRO A 2496 VAL A 2501 5 ? 6 HELX_P HELX_P10 10 PRO A 177 ? CYS A 205 ? PRO A 2502 CYS A 2530 1 ? 29 HELX_P HELX_P11 11 ASN A 217 ? PHE A 249 ? ASN A 2542 PHE A 2574 1 ? 33 HELX_P HELX_P12 12 ASP A 258 ? CYS A 267 ? ASP A 2583 CYS A 2592 1 ? 10 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 6 SG ? ? ? 1_555 A CYS 153 SG ? ? A CYS 2331 A CYS 2478 1_555 ? ? ? ? ? ? ? 2.035 ? ? disulf2 disulf ? ? A CYS 191 SG ? ? ? 1_555 A CYS 274 SG ? ? A CYS 2516 A CYS 2599 1_555 ? ? ? ? ? ? ? 2.041 ? ? disulf3 disulf ? ? A CYS 205 SG ? ? ? 1_555 A CYS 220 SG ? ? A CYS 2530 A CYS 2545 1_555 ? ? ? ? ? ? ? 2.033 ? ? disulf4 disulf ? ? A CYS 210 SG ? ? ? 1_555 A CYS 303 SG ? ? A CYS 2535 A CYS 2628 1_555 ? ? ? ? ? ? ? 2.035 ? ? disulf5 disulf ? ? A CYS 224 SG ? ? ? 1_555 A CYS 301 SG ? ? A CYS 2549 A CYS 2626 1_555 ? ? ? ? ? ? ? 2.034 ? ? disulf6 disulf ? ? A CYS 267 SG ? ? ? 1_555 A CYS 272 SG ? ? A CYS 2592 A CYS 2597 1_555 ? ? ? ? ? ? ? 2.026 ? ? covale1 covale one ? A CYS 58 SG ? ? ? 1_555 C DHL . SG ? ? A CYS 2383 A DHL 3631 1_555 ? ? ? ? ? ? ? 2.039 ? ? covale2 covale one ? A CYS 168 SG ? ? ? 1_555 B DHL . SG ? ? A CYS 2493 A DHL 3630 1_555 ? ? ? ? ? ? ? 2.028 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? covale ? ? # _struct_sheet.id AA _struct_sheet.type ? _struct_sheet.number_strands 2 _struct_sheet.details ? # _struct_sheet_order.sheet_id AA _struct_sheet_order.range_id_1 1 _struct_sheet_order.range_id_2 2 _struct_sheet_order.offset ? _struct_sheet_order.sense anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA 1 GLU A 34 ? SER A 36 ? GLU A 2359 SER A 2361 AA 2 VAL A 39 ? ILE A 41 ? VAL A 2364 ILE A 2366 # _pdbx_struct_sheet_hbond.sheet_id AA _pdbx_struct_sheet_hbond.range_id_1 1 _pdbx_struct_sheet_hbond.range_id_2 2 _pdbx_struct_sheet_hbond.range_1_label_atom_id N _pdbx_struct_sheet_hbond.range_1_label_comp_id SER _pdbx_struct_sheet_hbond.range_1_label_asym_id A _pdbx_struct_sheet_hbond.range_1_label_seq_id 36 _pdbx_struct_sheet_hbond.range_1_PDB_ins_code ? _pdbx_struct_sheet_hbond.range_1_auth_atom_id N _pdbx_struct_sheet_hbond.range_1_auth_comp_id SER _pdbx_struct_sheet_hbond.range_1_auth_asym_id A _pdbx_struct_sheet_hbond.range_1_auth_seq_id 2361 _pdbx_struct_sheet_hbond.range_2_label_atom_id O _pdbx_struct_sheet_hbond.range_2_label_comp_id VAL _pdbx_struct_sheet_hbond.range_2_label_asym_id A _pdbx_struct_sheet_hbond.range_2_label_seq_id 39 _pdbx_struct_sheet_hbond.range_2_PDB_ins_code ? _pdbx_struct_sheet_hbond.range_2_auth_atom_id O _pdbx_struct_sheet_hbond.range_2_auth_comp_id VAL _pdbx_struct_sheet_hbond.range_2_auth_asym_id A _pdbx_struct_sheet_hbond.range_2_auth_seq_id 2364 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A BEN 3629 ? 9 'BINDING SITE FOR RESIDUE BEN A 3629' AC2 Software A DHL 3630 ? 4 'BINDING SITE FOR RESIDUE DHL A 3630' AC3 Software A DHL 3631 ? 2 'BINDING SITE FOR RESIDUE DHL A 3631' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 9 HOH E . ? HOH A 2113 . ? 1_555 ? 2 AC1 9 HOH E . ? HOH A 2113 . ? 2_555 ? 3 AC1 9 ILE A 35 ? ILE A 2360 . ? 1_555 ? 4 AC1 9 ILE A 35 ? ILE A 2360 . ? 2_555 ? 5 AC1 9 THR A 233 ? THR A 2558 . ? 2_555 ? 6 AC1 9 THR A 236 ? THR A 2561 . ? 2_555 ? 7 AC1 9 THR A 236 ? THR A 2561 . ? 1_555 ? 8 AC1 9 GLU A 237 ? GLU A 2562 . ? 1_555 ? 9 AC1 9 GLU A 237 ? GLU A 2562 . ? 2_555 ? 10 AC2 4 TYR A 155 ? TYR A 2480 . ? 1_555 ? 11 AC2 4 THR A 164 ? THR A 2489 . ? 1_555 ? 12 AC2 4 GLU A 166 ? GLU A 2491 . ? 1_555 ? 13 AC2 4 CYS A 168 ? CYS A 2493 . ? 1_555 ? 14 AC3 2 CYS A 58 ? CYS A 2383 . ? 1_555 ? 15 AC3 2 ASN A 212 ? ASN A 2537 . ? 2_565 ? # _database_PDB_matrix.entry_id 2Y8D _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 2Y8D _atom_sites.fract_transf_matrix[1][1] 0.011647 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.007590 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.017784 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.015736 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 2326 ? ? ? A . n A 1 2 ASN 2 2327 2327 ASN ASN A . n A 1 3 ASP 3 2328 2328 ASP ASP A . n A 1 4 TYR 4 2329 2329 TYR TYR A . n A 1 5 ILE 5 2330 2330 ILE ILE A . n A 1 6 CYS 6 2331 2331 CYS CYS A . n A 1 7 ASN 7 2332 2332 ASN ASN A . n A 1 8 LYS 8 2333 2333 LYS LYS A . n A 1 9 TYR 9 2334 2334 TYR TYR A . n A 1 10 LYS 10 2335 2335 LYS LYS A . n A 1 11 ASN 11 2336 2336 ASN ASN A . n A 1 12 ILE 12 2337 2337 ILE ILE A . n A 1 13 HIS 13 2338 2338 HIS HIS A . n A 1 14 ASP 14 2339 2339 ASP ASP A . n A 1 15 ARG 15 2340 2340 ARG ARG A . n A 1 16 MET 16 2341 2341 MET MET A . n A 1 17 LYS 17 2342 2342 LYS LYS A . n A 1 18 LYS 18 2343 2343 LYS LYS A . n A 1 19 ASN 19 2344 2344 ASN ASN A . n A 1 20 ASN 20 2345 2345 ASN ASN A . n A 1 21 GLY 21 2346 2346 GLY GLY A . n A 1 22 ASN 22 2347 2347 ASN ASN A . n A 1 23 PHE 23 2348 2348 PHE PHE A . n A 1 24 VAL 24 2349 2349 VAL VAL A . n A 1 25 THR 25 2350 2350 THR THR A . n A 1 26 ASP 26 2351 2351 ASP ASP A . n A 1 27 ASN 27 2352 2352 ASN ASN A . n A 1 28 PHE 28 2353 2353 PHE PHE A . n A 1 29 VAL 29 2354 2354 VAL VAL A . n A 1 30 LYS 30 2355 2355 LYS LYS A . n A 1 31 LYS 31 2356 2356 LYS LYS A . n A 1 32 SER 32 2357 2357 SER SER A . n A 1 33 TRP 33 2358 2358 TRP TRP A . n A 1 34 GLU 34 2359 2359 GLU GLU A . n A 1 35 ILE 35 2360 2360 ILE ILE A . n A 1 36 SER 36 2361 2361 SER SER A . n A 1 37 ASN 37 2362 2362 ASN ASN A . n A 1 38 GLY 38 2363 2363 GLY GLY A . n A 1 39 VAL 39 2364 2364 VAL VAL A . n A 1 40 LEU 40 2365 2365 LEU LEU A . n A 1 41 ILE 41 2366 2366 ILE ILE A . n A 1 42 PRO 42 2367 2367 PRO PRO A . n A 1 43 PRO 43 2368 2368 PRO PRO A . n A 1 44 ARG 44 2369 2369 ARG ARG A . n A 1 45 ARG 45 2370 2370 ARG ARG A . n A 1 46 LYS 46 2371 2371 LYS LYS A . n A 1 47 ASN 47 2372 2372 ASN ASN A . n A 1 48 LEU 48 2373 2373 LEU LEU A . n A 1 49 PHE 49 2374 2374 PHE PHE A . n A 1 50 LEU 50 2375 2375 LEU LEU A . n A 1 51 TYR 51 2376 2376 TYR TYR A . n A 1 52 ILE 52 2377 2377 ILE ILE A . n A 1 53 ASP 53 2378 2378 ASP ASP A . n A 1 54 PRO 54 2379 2379 PRO PRO A . n A 1 55 SER 55 2380 2380 SER SER A . n A 1 56 LYS 56 2381 2381 LYS LYS A . n A 1 57 ILE 57 2382 2382 ILE ILE A . n A 1 58 CYS 58 2383 2383 CYS CYS A . n A 1 59 GLU 59 2384 2384 GLU GLU A . n A 1 60 TYR 60 2385 2385 TYR TYR A . n A 1 61 LYS 61 2386 2386 LYS LYS A . n A 1 62 LYS 62 2387 2387 LYS LYS A . n A 1 63 ASP 63 2388 2388 ASP ASP A . n A 1 64 PRO 64 2389 2389 PRO PRO A . n A 1 65 LYS 65 2390 2390 LYS LYS A . n A 1 66 LEU 66 2391 2391 LEU LEU A . n A 1 67 PHE 67 2392 2392 PHE PHE A . n A 1 68 LYS 68 2393 2393 LYS LYS A . n A 1 69 ASP 69 2394 2394 ASP ASP A . n A 1 70 PHE 70 2395 2395 PHE PHE A . n A 1 71 ILE 71 2396 2396 ILE ILE A . n A 1 72 TYR 72 2397 2397 TYR TYR A . n A 1 73 TRP 73 2398 2398 TRP TRP A . n A 1 74 SER 74 2399 2399 SER SER A . n A 1 75 ALA 75 2400 2400 ALA ALA A . n A 1 76 PHE 76 2401 2401 PHE PHE A . n A 1 77 THR 77 2402 2402 THR THR A . n A 1 78 GLU 78 2403 2403 GLU GLU A . n A 1 79 VAL 79 2404 2404 VAL VAL A . n A 1 80 GLU 80 2405 2405 GLU GLU A . n A 1 81 ARG 81 2406 2406 ARG ARG A . n A 1 82 LEU 82 2407 2407 LEU LEU A . n A 1 83 LYS 83 2408 2408 LYS LYS A . n A 1 84 LYS 84 2409 2409 LYS LYS A . n A 1 85 ALA 85 2410 2410 ALA ALA A . n A 1 86 TYR 86 2411 2411 TYR TYR A . n A 1 87 GLY 87 2412 2412 GLY GLY A . n A 1 88 GLY 88 2413 2413 GLY GLY A . n A 1 89 ALA 89 2414 2414 ALA ALA A . n A 1 90 ARG 90 2415 2415 ARG ARG A . n A 1 91 ALA 91 2416 2416 ALA ALA A . n A 1 92 LYS 92 2417 2417 LYS LYS A . n A 1 93 VAL 93 2418 2418 VAL VAL A . n A 1 94 VAL 94 2419 2419 VAL VAL A . n A 1 95 HIS 95 2420 2420 HIS HIS A . n A 1 96 ALA 96 2421 2421 ALA ALA A . n A 1 97 MET 97 2422 2422 MET MET A . n A 1 98 LYS 98 2423 2423 LYS LYS A . n A 1 99 TYR 99 2424 2424 TYR TYR A . n A 1 100 SER 100 2425 2425 SER SER A . n A 1 101 PHE 101 2426 2426 PHE PHE A . n A 1 102 THR 102 2427 2427 THR THR A . n A 1 103 ASP 103 2428 2428 ASP ASP A . n A 1 104 ILE 104 2429 2429 ILE ILE A . n A 1 105 GLY 105 2430 2430 GLY GLY A . n A 1 106 SER 106 2431 2431 SER SER A . n A 1 107 ILE 107 2432 2432 ILE ILE A . n A 1 108 ILE 108 2433 2433 ILE ILE A . n A 1 109 LYS 109 2434 2434 LYS LYS A . n A 1 110 GLY 110 2435 2435 GLY GLY A . n A 1 111 ASP 111 2436 2436 ASP ASP A . n A 1 112 ASP 112 2437 2437 ASP ASP A . n A 1 113 MET 113 2438 2438 MET MET A . n A 1 114 MET 114 2439 2439 MET MET A . n A 1 115 GLU 115 2440 2440 GLU GLU A . n A 1 116 LYS 116 2441 2441 LYS LYS A . n A 1 117 ASN 117 2442 2442 ASN ASN A . n A 1 118 SER 118 2443 2443 SER SER A . n A 1 119 SER 119 2444 2444 SER SER A . n A 1 120 ASP 120 2445 2445 ASP ASP A . n A 1 121 LYS 121 2446 2446 LYS LYS A . n A 1 122 ILE 122 2447 2447 ILE ILE A . n A 1 123 GLY 123 2448 2448 GLY GLY A . n A 1 124 LYS 124 2449 2449 LYS LYS A . n A 1 125 ILE 125 2450 2450 ILE ILE A . n A 1 126 LEU 126 2451 2451 LEU LEU A . n A 1 127 GLY 127 2452 2452 GLY GLY A . n A 1 128 ASP 128 2453 2453 ASP ASP A . n A 1 129 THR 129 2454 2454 THR THR A . n A 1 130 ASP 130 2455 2455 ASP ASP A . n A 1 131 GLY 131 2456 2456 GLY GLY A . n A 1 132 GLN 132 2457 2457 GLN GLN A . n A 1 133 ASN 133 2458 2458 ASN ASN A . n A 1 134 GLU 134 2459 2459 GLU GLU A . n A 1 135 LYS 135 2460 2460 LYS LYS A . n A 1 136 ARG 136 2461 2461 ARG ARG A . n A 1 137 LYS 137 2462 2462 LYS LYS A . n A 1 138 LYS 138 2463 2463 LYS LYS A . n A 1 139 TRP 139 2464 2464 TRP TRP A . n A 1 140 TRP 140 2465 2465 TRP TRP A . n A 1 141 ASP 141 2466 2466 ASP ASP A . n A 1 142 MET 142 2467 2467 MET MET A . n A 1 143 ASN 143 2468 2468 ASN ASN A . n A 1 144 LYS 144 2469 2469 LYS LYS A . n A 1 145 TYR 145 2470 2470 TYR TYR A . n A 1 146 HIS 146 2471 2471 HIS HIS A . n A 1 147 ILE 147 2472 2472 ILE ILE A . n A 1 148 TRP 148 2473 2473 TRP TRP A . n A 1 149 GLU 149 2474 2474 GLU GLU A . n A 1 150 SER 150 2475 2475 SER SER A . n A 1 151 MET 151 2476 2476 MET MET A . n A 1 152 LEU 152 2477 2477 LEU LEU A . n A 1 153 CYS 153 2478 2478 CYS CYS A . n A 1 154 GLY 154 2479 2479 GLY GLY A . n A 1 155 TYR 155 2480 2480 TYR TYR A . n A 1 156 ARG 156 2481 2481 ARG ARG A . n A 1 157 GLU 157 2482 2482 GLU GLU A . n A 1 158 ALA 158 2483 2483 ALA ALA A . n A 1 159 GLU 159 2484 2484 GLU GLU A . n A 1 160 GLY 160 2485 2485 GLY GLY A . n A 1 161 ASP 161 2486 2486 ASP ASP A . n A 1 162 THR 162 2487 2487 THR THR A . n A 1 163 GLU 163 2488 2488 GLU GLU A . n A 1 164 THR 164 2489 2489 THR THR A . n A 1 165 ASN 165 2490 2490 ASN ASN A . n A 1 166 GLU 166 2491 2491 GLU GLU A . n A 1 167 ASN 167 2492 2492 ASN ASN A . n A 1 168 CYS 168 2493 2493 CYS CYS A . n A 1 169 ARG 169 2494 2494 ARG ARG A . n A 1 170 PHE 170 2495 2495 PHE PHE A . n A 1 171 PRO 171 2496 2496 PRO PRO A . n A 1 172 ASP 172 2497 2497 ASP ASP A . n A 1 173 ILE 173 2498 2498 ILE ILE A . n A 1 174 GLU 174 2499 2499 GLU GLU A . n A 1 175 SER 175 2500 2500 SER SER A . n A 1 176 VAL 176 2501 2501 VAL VAL A . n A 1 177 PRO 177 2502 2502 PRO PRO A . n A 1 178 GLN 178 2503 2503 GLN GLN A . n A 1 179 PHE 179 2504 2504 PHE PHE A . n A 1 180 LEU 180 2505 2505 LEU LEU A . n A 1 181 ARG 181 2506 2506 ARG ARG A . n A 1 182 TRP 182 2507 2507 TRP TRP A . n A 1 183 PHE 183 2508 2508 PHE PHE A . n A 1 184 GLN 184 2509 2509 GLN GLN A . n A 1 185 GLU 185 2510 2510 GLU GLU A . n A 1 186 TRP 186 2511 2511 TRP TRP A . n A 1 187 SER 187 2512 2512 SER SER A . n A 1 188 GLU 188 2513 2513 GLU GLU A . n A 1 189 ASN 189 2514 2514 ASN ASN A . n A 1 190 PHE 190 2515 2515 PHE PHE A . n A 1 191 CYS 191 2516 2516 CYS CYS A . n A 1 192 ASP 192 2517 2517 ASP ASP A . n A 1 193 ARG 193 2518 2518 ARG ARG A . n A 1 194 ARG 194 2519 2519 ARG ARG A . n A 1 195 GLN 195 2520 2520 GLN GLN A . n A 1 196 LYS 196 2521 2521 LYS LYS A . n A 1 197 LEU 197 2522 2522 LEU LEU A . n A 1 198 TYR 198 2523 2523 TYR TYR A . n A 1 199 ASP 199 2524 2524 ASP ASP A . n A 1 200 LYS 200 2525 2525 LYS LYS A . n A 1 201 LEU 201 2526 2526 LEU LEU A . n A 1 202 ASN 202 2527 2527 ASN ASN A . n A 1 203 SER 203 2528 2528 SER SER A . n A 1 204 GLU 204 2529 2529 GLU GLU A . n A 1 205 CYS 205 2530 2530 CYS CYS A . n A 1 206 ILE 206 2531 2531 ILE ILE A . n A 1 207 SER 207 2532 2532 SER SER A . n A 1 208 ALA 208 2533 2533 ALA ALA A . n A 1 209 GLU 209 2534 2534 GLU GLU A . n A 1 210 CYS 210 2535 2535 CYS CYS A . n A 1 211 THR 211 2536 2536 THR THR A . n A 1 212 ASN 212 2537 2537 ASN ASN A . n A 1 213 GLY 213 2538 2538 GLY GLY A . n A 1 214 SER 214 2539 2539 SER SER A . n A 1 215 VAL 215 2540 2540 VAL VAL A . n A 1 216 ASP 216 2541 2541 ASP ASP A . n A 1 217 ASN 217 2542 2542 ASN ASN A . n A 1 218 SER 218 2543 2543 SER SER A . n A 1 219 LYS 219 2544 2544 LYS LYS A . n A 1 220 CYS 220 2545 2545 CYS CYS A . n A 1 221 THR 221 2546 2546 THR THR A . n A 1 222 HIS 222 2547 2547 HIS HIS A . n A 1 223 ALA 223 2548 2548 ALA ALA A . n A 1 224 CYS 224 2549 2549 CYS CYS A . n A 1 225 VAL 225 2550 2550 VAL VAL A . n A 1 226 ASN 226 2551 2551 ASN ASN A . n A 1 227 TYR 227 2552 2552 TYR TYR A . n A 1 228 LYS 228 2553 2553 LYS LYS A . n A 1 229 ASN 229 2554 2554 ASN ASN A . n A 1 230 TYR 230 2555 2555 TYR TYR A . n A 1 231 ILE 231 2556 2556 ILE ILE A . n A 1 232 LEU 232 2557 2557 LEU LEU A . n A 1 233 THR 233 2558 2558 THR THR A . n A 1 234 LYS 234 2559 2559 LYS LYS A . n A 1 235 LYS 235 2560 2560 LYS LYS A . n A 1 236 THR 236 2561 2561 THR THR A . n A 1 237 GLU 237 2562 2562 GLU GLU A . n A 1 238 TYR 238 2563 2563 TYR TYR A . n A 1 239 GLU 239 2564 2564 GLU GLU A . n A 1 240 ILE 240 2565 2565 ILE ILE A . n A 1 241 GLN 241 2566 2566 GLN GLN A . n A 1 242 THR 242 2567 2567 THR THR A . n A 1 243 ASN 243 2568 2568 ASN ASN A . n A 1 244 LYS 244 2569 2569 LYS LYS A . n A 1 245 TYR 245 2570 2570 TYR TYR A . n A 1 246 ASP 246 2571 2571 ASP ASP A . n A 1 247 ASN 247 2572 2572 ASN ASN A . n A 1 248 GLU 248 2573 2573 GLU GLU A . n A 1 249 PHE 249 2574 2574 PHE PHE A . n A 1 250 LYS 250 2575 2575 LYS LYS A . n A 1 251 ASN 251 2576 2576 ASN ASN A . n A 1 252 LYS 252 2577 2577 LYS LYS A . n A 1 253 ASN 253 2578 2578 ASN ASN A . n A 1 254 SER 254 2579 2579 SER SER A . n A 1 255 ASN 255 2580 2580 ASN ASN A . n A 1 256 ASP 256 2581 2581 ASP ASP A . n A 1 257 LYS 257 2582 2582 LYS LYS A . n A 1 258 ASP 258 2583 2583 ASP ASP A . n A 1 259 ALA 259 2584 2584 ALA ALA A . n A 1 260 PRO 260 2585 2585 PRO PRO A . n A 1 261 ASP 261 2586 2586 ASP ASP A . n A 1 262 TYR 262 2587 2587 TYR TYR A . n A 1 263 LEU 263 2588 2588 LEU LEU A . n A 1 264 LYS 264 2589 2589 LYS LYS A . n A 1 265 GLU 265 2590 2590 GLU GLU A . n A 1 266 LYS 266 2591 2591 LYS LYS A . n A 1 267 CYS 267 2592 2592 CYS CYS A . n A 1 268 ASN 268 2593 2593 ASN ASN A . n A 1 269 ASP 269 2594 2594 ASP ASP A . n A 1 270 ASN 270 2595 2595 ASN ASN A . n A 1 271 LYS 271 2596 2596 LYS LYS A . n A 1 272 CYS 272 2597 2597 CYS CYS A . n A 1 273 GLU 273 2598 2598 GLU GLU A . n A 1 274 CYS 274 2599 2599 CYS CYS A . n A 1 275 LEU 275 2600 2600 LEU LEU A . n A 1 276 ASN 276 2601 2601 ASN ASN A . n A 1 277 LYS 277 2602 2602 LYS LYS A . n A 1 278 HIS 278 2603 ? ? ? A . n A 1 279 ILE 279 2604 ? ? ? A . n A 1 280 ASP 280 2605 ? ? ? A . n A 1 281 ASP 281 2606 ? ? ? A . n A 1 282 LYS 282 2607 ? ? ? A . n A 1 283 ASN 283 2608 ? ? ? A . n A 1 284 LYS 284 2609 ? ? ? A . n A 1 285 THR 285 2610 ? ? ? A . n A 1 286 TRP 286 2611 ? ? ? A . n A 1 287 LYS 287 2612 ? ? ? A . n A 1 288 ASN 288 2613 ? ? ? A . n A 1 289 PRO 289 2614 ? ? ? A . n A 1 290 TYR 290 2615 ? ? ? A . n A 1 291 GLU 291 2616 ? ? ? A . n A 1 292 THR 292 2617 ? ? ? A . n A 1 293 LEU 293 2618 ? ? ? A . n A 1 294 GLU 294 2619 ? ? ? A . n A 1 295 ASP 295 2620 ? ? ? A . n A 1 296 THR 296 2621 ? ? ? A . n A 1 297 PHE 297 2622 ? ? ? A . n A 1 298 LYS 298 2623 ? ? ? A . n A 1 299 SER 299 2624 2624 SER SER A . n A 1 300 LYS 300 2625 2625 LYS LYS A . n A 1 301 CYS 301 2626 2626 CYS CYS A . n A 1 302 ASP 302 2627 2627 ASP ASP A . n A 1 303 CYS 303 2628 2628 CYS CYS A . n A 1 304 PRO 304 2629 ? ? ? A . n A 1 305 LYS 305 2630 ? ? ? A . n A 1 306 PRO 306 2631 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 DHL 1 3630 3630 DHL DHL A . C 2 DHL 1 3631 3631 DHL DHL A . D 3 BEN 1 3629 3629 BEN BEN A . E 4 HOH 1 2001 2001 HOH HOH A . E 4 HOH 2 2002 2002 HOH HOH A . E 4 HOH 3 2003 2003 HOH HOH A . E 4 HOH 4 2004 2004 HOH HOH A . E 4 HOH 5 2005 2005 HOH HOH A . E 4 HOH 6 2006 2006 HOH HOH A . E 4 HOH 7 2007 2007 HOH HOH A . E 4 HOH 8 2008 2008 HOH HOH A . E 4 HOH 9 2009 2009 HOH HOH A . E 4 HOH 10 2010 2010 HOH HOH A . E 4 HOH 11 2011 2011 HOH HOH A . E 4 HOH 12 2012 2012 HOH HOH A . E 4 HOH 13 2013 2013 HOH HOH A . E 4 HOH 14 2014 2014 HOH HOH A . E 4 HOH 15 2015 2015 HOH HOH A . E 4 HOH 16 2016 2016 HOH HOH A . E 4 HOH 17 2017 2017 HOH HOH A . E 4 HOH 18 2018 2018 HOH HOH A . E 4 HOH 19 2019 2019 HOH HOH A . E 4 HOH 20 2020 2020 HOH HOH A . E 4 HOH 21 2021 2021 HOH HOH A . E 4 HOH 22 2022 2022 HOH HOH A . E 4 HOH 23 2023 2023 HOH HOH A . E 4 HOH 24 2024 2024 HOH HOH A . E 4 HOH 25 2025 2025 HOH HOH A . E 4 HOH 26 2026 2026 HOH HOH A . E 4 HOH 27 2027 2027 HOH HOH A . E 4 HOH 28 2028 2028 HOH HOH A . E 4 HOH 29 2029 2029 HOH HOH A . E 4 HOH 30 2030 2030 HOH HOH A . E 4 HOH 31 2031 2031 HOH HOH A . E 4 HOH 32 2032 2032 HOH HOH A . E 4 HOH 33 2033 2033 HOH HOH A . E 4 HOH 34 2034 2034 HOH HOH A . E 4 HOH 35 2035 2035 HOH HOH A . E 4 HOH 36 2036 2036 HOH HOH A . E 4 HOH 37 2037 2037 HOH HOH A . E 4 HOH 38 2038 2038 HOH HOH A . E 4 HOH 39 2039 2039 HOH HOH A . E 4 HOH 40 2040 2040 HOH HOH A . E 4 HOH 41 2041 2041 HOH HOH A . E 4 HOH 42 2042 2042 HOH HOH A . E 4 HOH 43 2043 2043 HOH HOH A . E 4 HOH 44 2044 2044 HOH HOH A . E 4 HOH 45 2045 2045 HOH HOH A . E 4 HOH 46 2046 2046 HOH HOH A . E 4 HOH 47 2047 2047 HOH HOH A . E 4 HOH 48 2048 2048 HOH HOH A . E 4 HOH 49 2049 2049 HOH HOH A . E 4 HOH 50 2050 2050 HOH HOH A . E 4 HOH 51 2051 2051 HOH HOH A . E 4 HOH 52 2052 2052 HOH HOH A . E 4 HOH 53 2053 2053 HOH HOH A . E 4 HOH 54 2054 2054 HOH HOH A . E 4 HOH 55 2055 2055 HOH HOH A . E 4 HOH 56 2056 2056 HOH HOH A . E 4 HOH 57 2057 2057 HOH HOH A . E 4 HOH 58 2058 2058 HOH HOH A . E 4 HOH 59 2059 2059 HOH HOH A . E 4 HOH 60 2060 2060 HOH HOH A . E 4 HOH 61 2061 2061 HOH HOH A . E 4 HOH 62 2062 2062 HOH HOH A . E 4 HOH 63 2063 2063 HOH HOH A . E 4 HOH 64 2064 2064 HOH HOH A . E 4 HOH 65 2066 2066 HOH HOH A . E 4 HOH 66 2067 2067 HOH HOH A . E 4 HOH 67 2068 2068 HOH HOH A . E 4 HOH 68 2069 2069 HOH HOH A . E 4 HOH 69 2070 2070 HOH HOH A . E 4 HOH 70 2071 2071 HOH HOH A . E 4 HOH 71 2072 2072 HOH HOH A . E 4 HOH 72 2073 2073 HOH HOH A . E 4 HOH 73 2074 2074 HOH HOH A . E 4 HOH 74 2075 2075 HOH HOH A . E 4 HOH 75 2076 2076 HOH HOH A . E 4 HOH 76 2077 2077 HOH HOH A . E 4 HOH 77 2078 2078 HOH HOH A . E 4 HOH 78 2079 2079 HOH HOH A . E 4 HOH 79 2080 2080 HOH HOH A . E 4 HOH 80 2081 2081 HOH HOH A . E 4 HOH 81 2082 2082 HOH HOH A . E 4 HOH 82 2083 2083 HOH HOH A . E 4 HOH 83 2084 2084 HOH HOH A . E 4 HOH 84 2085 2085 HOH HOH A . E 4 HOH 85 2086 2086 HOH HOH A . E 4 HOH 86 2087 2087 HOH HOH A . E 4 HOH 87 2088 2088 HOH HOH A . E 4 HOH 88 2089 2089 HOH HOH A . E 4 HOH 89 2090 2090 HOH HOH A . E 4 HOH 90 2091 2091 HOH HOH A . E 4 HOH 91 2092 2092 HOH HOH A . E 4 HOH 92 2093 2093 HOH HOH A . E 4 HOH 93 2094 2094 HOH HOH A . E 4 HOH 94 2095 2095 HOH HOH A . E 4 HOH 95 2096 2096 HOH HOH A . E 4 HOH 96 2097 2097 HOH HOH A . E 4 HOH 97 2098 2098 HOH HOH A . E 4 HOH 98 2099 2099 HOH HOH A . E 4 HOH 99 2100 2100 HOH HOH A . E 4 HOH 100 2101 2101 HOH HOH A . E 4 HOH 101 2102 2102 HOH HOH A . E 4 HOH 102 2103 2103 HOH HOH A . E 4 HOH 103 2104 2104 HOH HOH A . E 4 HOH 104 2105 2105 HOH HOH A . E 4 HOH 105 2106 2106 HOH HOH A . E 4 HOH 106 2107 2107 HOH HOH A . E 4 HOH 107 2108 2108 HOH HOH A . E 4 HOH 108 2109 2109 HOH HOH A . E 4 HOH 109 2110 2110 HOH HOH A . E 4 HOH 110 2111 2111 HOH HOH A . E 4 HOH 111 2112 2112 HOH HOH A . E 4 HOH 112 2113 2113 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_special_symmetry.id _pdbx_struct_special_symmetry.PDB_model_num _pdbx_struct_special_symmetry.auth_asym_id _pdbx_struct_special_symmetry.auth_comp_id _pdbx_struct_special_symmetry.auth_seq_id _pdbx_struct_special_symmetry.PDB_ins_code _pdbx_struct_special_symmetry.label_asym_id _pdbx_struct_special_symmetry.label_comp_id _pdbx_struct_special_symmetry.label_seq_id 1 1 A BEN 3629 ? D BEN . 2 1 A BEN 3629 ? D BEN . # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2012-02-15 2 'Structure model' 1 1 2013-02-27 3 'Structure model' 1 2 2013-03-20 4 'Structure model' 1 3 2013-05-15 5 'Structure model' 1 4 2019-03-06 6 'Structure model' 1 5 2023-12-20 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Database references' 3 4 'Structure model' 'Database references' 4 5 'Structure model' 'Data collection' 5 5 'Structure model' 'Derived calculations' 6 5 'Structure model' 'Experimental preparation' 7 5 'Structure model' Other 8 6 'Structure model' 'Data collection' 9 6 'Structure model' 'Database references' 10 6 'Structure model' 'Derived calculations' 11 6 'Structure model' Other 12 6 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 5 'Structure model' exptl_crystal_grow 2 5 'Structure model' pdbx_database_proc 3 5 'Structure model' pdbx_database_status 4 5 'Structure model' struct_conn 5 6 'Structure model' chem_comp_atom 6 6 'Structure model' chem_comp_bond 7 6 'Structure model' database_2 8 6 'Structure model' pdbx_database_status 9 6 'Structure model' pdbx_initial_refinement_model 10 6 'Structure model' struct_conn 11 6 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 5 'Structure model' '_exptl_crystal_grow.method' 2 5 'Structure model' '_pdbx_database_status.recvd_author_approval' 3 5 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 4 6 'Structure model' '_database_2.pdbx_DOI' 5 6 'Structure model' '_database_2.pdbx_database_accession' 6 6 'Structure model' '_pdbx_database_status.status_code_sf' 7 6 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 8 6 'Structure model' '_struct_site.pdbx_auth_asym_id' 9 6 'Structure model' '_struct_site.pdbx_auth_comp_id' 10 6 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal BUSTER refinement 2.9.3 ? 1 XDS 'data reduction' . ? 2 SCALA 'data scaling' . ? 3 MOLREP phasing . ? 4 # _pdbx_entry_details.entry_id 2Y8D _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ;BENZAMIDINE (BDN): THE BENZAMIDINE MOIETY LIES ON A TWO-FOLD AXIS ; _pdbx_entry_details.sequence_details ? _pdbx_entry_details.has_ligand_of_interest ? # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASN A 2352 ? ? 39.44 63.22 2 1 LEU A 2375 ? ? -154.76 84.66 3 1 ALA A 2414 ? ? -66.58 95.16 4 1 ASP A 2455 ? ? 57.61 -128.35 5 1 CYS A 2530 ? ? -97.68 36.30 6 1 ASN A 2595 ? ? 58.56 15.55 7 1 ASP A 2627 ? ? -64.05 90.92 # _pdbx_validate_planes.id 1 _pdbx_validate_planes.PDB_model_num 1 _pdbx_validate_planes.auth_comp_id ARG _pdbx_validate_planes.auth_asym_id A _pdbx_validate_planes.auth_seq_id 2481 _pdbx_validate_planes.PDB_ins_code ? _pdbx_validate_planes.label_alt_id ? _pdbx_validate_planes.rmsd 0.279 _pdbx_validate_planes.type 'SIDE CHAIN' # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A SER 2539 ? OG ? A SER 214 OG 2 1 Y 1 A ASP 2541 ? CG ? A ASP 216 CG 3 1 Y 1 A ASP 2541 ? OD1 ? A ASP 216 OD1 4 1 Y 1 A ASP 2541 ? OD2 ? A ASP 216 OD2 5 1 Y 1 A LYS 2602 ? CG ? A LYS 277 CG 6 1 Y 1 A LYS 2602 ? CD ? A LYS 277 CD 7 1 Y 1 A LYS 2602 ? CE ? A LYS 277 CE 8 1 Y 1 A LYS 2602 ? NZ ? A LYS 277 NZ 9 1 Y 1 A ASP 2627 ? CG ? A ASP 302 CG 10 1 Y 1 A ASP 2627 ? OD1 ? A ASP 302 OD1 11 1 Y 1 A ASP 2627 ? OD2 ? A ASP 302 OD2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 2326 ? A GLY 1 2 1 Y 1 A HIS 2603 ? A HIS 278 3 1 Y 1 A ILE 2604 ? A ILE 279 4 1 Y 1 A ASP 2605 ? A ASP 280 5 1 Y 1 A ASP 2606 ? A ASP 281 6 1 Y 1 A LYS 2607 ? A LYS 282 7 1 Y 1 A ASN 2608 ? A ASN 283 8 1 Y 1 A LYS 2609 ? A LYS 284 9 1 Y 1 A THR 2610 ? A THR 285 10 1 Y 1 A TRP 2611 ? A TRP 286 11 1 Y 1 A LYS 2612 ? A LYS 287 12 1 Y 1 A ASN 2613 ? A ASN 288 13 1 Y 1 A PRO 2614 ? A PRO 289 14 1 Y 1 A TYR 2615 ? A TYR 290 15 1 Y 1 A GLU 2616 ? A GLU 291 16 1 Y 1 A THR 2617 ? A THR 292 17 1 Y 1 A LEU 2618 ? A LEU 293 18 1 Y 1 A GLU 2619 ? A GLU 294 19 1 Y 1 A ASP 2620 ? A ASP 295 20 1 Y 1 A THR 2621 ? A THR 296 21 1 Y 1 A PHE 2622 ? A PHE 297 22 1 Y 1 A LYS 2623 ? A LYS 298 23 1 Y 1 A PRO 2629 ? A PRO 304 24 1 Y 1 A LYS 2630 ? A LYS 305 25 1 Y 1 A PRO 2631 ? A PRO 306 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 BEN C1 C Y N 74 BEN C2 C Y N 75 BEN C3 C Y N 76 BEN C4 C Y N 77 BEN C5 C Y N 78 BEN C6 C Y N 79 BEN C C N N 80 BEN N1 N N N 81 BEN N2 N N N 82 BEN H2 H N N 83 BEN H3 H N N 84 BEN H4 H N N 85 BEN H5 H N N 86 BEN H6 H N N 87 BEN HN1 H N N 88 BEN HN21 H N N 89 BEN HN22 H N N 90 CYS N N N N 91 CYS CA C N R 92 CYS C C N N 93 CYS O O N N 94 CYS CB C N N 95 CYS SG S N N 96 CYS OXT O N N 97 CYS H H N N 98 CYS H2 H N N 99 CYS HA H N N 100 CYS HB2 H N N 101 CYS HB3 H N N 102 CYS HG H N N 103 CYS HXT H N N 104 DHL N N N N 105 DHL CA C N N 106 DHL CB C N N 107 DHL SG S N N 108 DHL HN1 H N N 109 DHL HN2 H N N 110 DHL HA2 H N N 111 DHL HA3 H N N 112 DHL HB2 H N N 113 DHL HB3 H N N 114 DHL HS H N N 115 GLN N N N N 116 GLN CA C N S 117 GLN C C N N 118 GLN O O N N 119 GLN CB C N N 120 GLN CG C N N 121 GLN CD C N N 122 GLN OE1 O N N 123 GLN NE2 N N N 124 GLN OXT O N N 125 GLN H H N N 126 GLN H2 H N N 127 GLN HA H N N 128 GLN HB2 H N N 129 GLN HB3 H N N 130 GLN HG2 H N N 131 GLN HG3 H N N 132 GLN HE21 H N N 133 GLN HE22 H N N 134 GLN HXT H N N 135 GLU N N N N 136 GLU CA C N S 137 GLU C C N N 138 GLU O O N N 139 GLU CB C N N 140 GLU CG C N N 141 GLU CD C N N 142 GLU OE1 O N N 143 GLU OE2 O N N 144 GLU OXT O N N 145 GLU H H N N 146 GLU H2 H N N 147 GLU HA H N N 148 GLU HB2 H N N 149 GLU HB3 H N N 150 GLU HG2 H N N 151 GLU HG3 H N N 152 GLU HE2 H N N 153 GLU HXT H N N 154 GLY N N N N 155 GLY CA C N N 156 GLY C C N N 157 GLY O O N N 158 GLY OXT O N N 159 GLY H H N N 160 GLY H2 H N N 161 GLY HA2 H N N 162 GLY HA3 H N N 163 GLY HXT H N N 164 HIS N N N N 165 HIS CA C N S 166 HIS C C N N 167 HIS O O N N 168 HIS CB C N N 169 HIS CG C Y N 170 HIS ND1 N Y N 171 HIS CD2 C Y N 172 HIS CE1 C Y N 173 HIS NE2 N Y N 174 HIS OXT O N N 175 HIS H H N N 176 HIS H2 H N N 177 HIS HA H N N 178 HIS HB2 H N N 179 HIS HB3 H N N 180 HIS HD1 H N N 181 HIS HD2 H N N 182 HIS HE1 H N N 183 HIS HE2 H N N 184 HIS HXT H N N 185 HOH O O N N 186 HOH H1 H N N 187 HOH H2 H N N 188 ILE N N N N 189 ILE CA C N S 190 ILE C C N N 191 ILE O O N N 192 ILE CB C N S 193 ILE CG1 C N N 194 ILE CG2 C N N 195 ILE CD1 C N N 196 ILE OXT O N N 197 ILE H H N N 198 ILE H2 H N N 199 ILE HA H N N 200 ILE HB H N N 201 ILE HG12 H N N 202 ILE HG13 H N N 203 ILE HG21 H N N 204 ILE HG22 H N N 205 ILE HG23 H N N 206 ILE HD11 H N N 207 ILE HD12 H N N 208 ILE HD13 H N N 209 ILE HXT H N N 210 LEU N N N N 211 LEU CA C N S 212 LEU C C N N 213 LEU O O N N 214 LEU CB C N N 215 LEU CG C N N 216 LEU CD1 C N N 217 LEU CD2 C N N 218 LEU OXT O N N 219 LEU H H N N 220 LEU H2 H N N 221 LEU HA H N N 222 LEU HB2 H N N 223 LEU HB3 H N N 224 LEU HG H N N 225 LEU HD11 H N N 226 LEU HD12 H N N 227 LEU HD13 H N N 228 LEU HD21 H N N 229 LEU HD22 H N N 230 LEU HD23 H N N 231 LEU HXT H N N 232 LYS N N N N 233 LYS CA C N S 234 LYS C C N N 235 LYS O O N N 236 LYS CB C N N 237 LYS CG C N N 238 LYS CD C N N 239 LYS CE C N N 240 LYS NZ N N N 241 LYS OXT O N N 242 LYS H H N N 243 LYS H2 H N N 244 LYS HA H N N 245 LYS HB2 H N N 246 LYS HB3 H N N 247 LYS HG2 H N N 248 LYS HG3 H N N 249 LYS HD2 H N N 250 LYS HD3 H N N 251 LYS HE2 H N N 252 LYS HE3 H N N 253 LYS HZ1 H N N 254 LYS HZ2 H N N 255 LYS HZ3 H N N 256 LYS HXT H N N 257 MET N N N N 258 MET CA C N S 259 MET C C N N 260 MET O O N N 261 MET CB C N N 262 MET CG C N N 263 MET SD S N N 264 MET CE C N N 265 MET OXT O N N 266 MET H H N N 267 MET H2 H N N 268 MET HA H N N 269 MET HB2 H N N 270 MET HB3 H N N 271 MET HG2 H N N 272 MET HG3 H N N 273 MET HE1 H N N 274 MET HE2 H N N 275 MET HE3 H N N 276 MET HXT H N N 277 PHE N N N N 278 PHE CA C N S 279 PHE C C N N 280 PHE O O N N 281 PHE CB C N N 282 PHE CG C Y N 283 PHE CD1 C Y N 284 PHE CD2 C Y N 285 PHE CE1 C Y N 286 PHE CE2 C Y N 287 PHE CZ C Y N 288 PHE OXT O N N 289 PHE H H N N 290 PHE H2 H N N 291 PHE HA H N N 292 PHE HB2 H N N 293 PHE HB3 H N N 294 PHE HD1 H N N 295 PHE HD2 H N N 296 PHE HE1 H N N 297 PHE HE2 H N N 298 PHE HZ H N N 299 PHE HXT H N N 300 PRO N N N N 301 PRO CA C N S 302 PRO C C N N 303 PRO O O N N 304 PRO CB C N N 305 PRO CG C N N 306 PRO CD C N N 307 PRO OXT O N N 308 PRO H H N N 309 PRO HA H N N 310 PRO HB2 H N N 311 PRO HB3 H N N 312 PRO HG2 H N N 313 PRO HG3 H N N 314 PRO HD2 H N N 315 PRO HD3 H N N 316 PRO HXT H N N 317 SER N N N N 318 SER CA C N S 319 SER C C N N 320 SER O O N N 321 SER CB C N N 322 SER OG O N N 323 SER OXT O N N 324 SER H H N N 325 SER H2 H N N 326 SER HA H N N 327 SER HB2 H N N 328 SER HB3 H N N 329 SER HG H N N 330 SER HXT H N N 331 THR N N N N 332 THR CA C N S 333 THR C C N N 334 THR O O N N 335 THR CB C N R 336 THR OG1 O N N 337 THR CG2 C N N 338 THR OXT O N N 339 THR H H N N 340 THR H2 H N N 341 THR HA H N N 342 THR HB H N N 343 THR HG1 H N N 344 THR HG21 H N N 345 THR HG22 H N N 346 THR HG23 H N N 347 THR HXT H N N 348 TRP N N N N 349 TRP CA C N S 350 TRP C C N N 351 TRP O O N N 352 TRP CB C N N 353 TRP CG C Y N 354 TRP CD1 C Y N 355 TRP CD2 C Y N 356 TRP NE1 N Y N 357 TRP CE2 C Y N 358 TRP CE3 C Y N 359 TRP CZ2 C Y N 360 TRP CZ3 C Y N 361 TRP CH2 C Y N 362 TRP OXT O N N 363 TRP H H N N 364 TRP H2 H N N 365 TRP HA H N N 366 TRP HB2 H N N 367 TRP HB3 H N N 368 TRP HD1 H N N 369 TRP HE1 H N N 370 TRP HE3 H N N 371 TRP HZ2 H N N 372 TRP HZ3 H N N 373 TRP HH2 H N N 374 TRP HXT H N N 375 TYR N N N N 376 TYR CA C N S 377 TYR C C N N 378 TYR O O N N 379 TYR CB C N N 380 TYR CG C Y N 381 TYR CD1 C Y N 382 TYR CD2 C Y N 383 TYR CE1 C Y N 384 TYR CE2 C Y N 385 TYR CZ C Y N 386 TYR OH O N N 387 TYR OXT O N N 388 TYR H H N N 389 TYR H2 H N N 390 TYR HA H N N 391 TYR HB2 H N N 392 TYR HB3 H N N 393 TYR HD1 H N N 394 TYR HD2 H N N 395 TYR HE1 H N N 396 TYR HE2 H N N 397 TYR HH H N N 398 TYR HXT H N N 399 VAL N N N N 400 VAL CA C N S 401 VAL C C N N 402 VAL O O N N 403 VAL CB C N N 404 VAL CG1 C N N 405 VAL CG2 C N N 406 VAL OXT O N N 407 VAL H H N N 408 VAL H2 H N N 409 VAL HA H N N 410 VAL HB H N N 411 VAL HG11 H N N 412 VAL HG12 H N N 413 VAL HG13 H N N 414 VAL HG21 H N N 415 VAL HG22 H N N 416 VAL HG23 H N N 417 VAL HXT H N N 418 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 BEN C1 C2 doub Y N 70 BEN C1 C6 sing Y N 71 BEN C1 C sing N N 72 BEN C2 C3 sing Y N 73 BEN C2 H2 sing N N 74 BEN C3 C4 doub Y N 75 BEN C3 H3 sing N N 76 BEN C4 C5 sing Y N 77 BEN C4 H4 sing N N 78 BEN C5 C6 doub Y N 79 BEN C5 H5 sing N N 80 BEN C6 H6 sing N N 81 BEN C N1 doub N E 82 BEN C N2 sing N N 83 BEN N1 HN1 sing N N 84 BEN N2 HN21 sing N N 85 BEN N2 HN22 sing N N 86 CYS N CA sing N N 87 CYS N H sing N N 88 CYS N H2 sing N N 89 CYS CA C sing N N 90 CYS CA CB sing N N 91 CYS CA HA sing N N 92 CYS C O doub N N 93 CYS C OXT sing N N 94 CYS CB SG sing N N 95 CYS CB HB2 sing N N 96 CYS CB HB3 sing N N 97 CYS SG HG sing N N 98 CYS OXT HXT sing N N 99 DHL N CA sing N N 100 DHL N HN1 sing N N 101 DHL N HN2 sing N N 102 DHL CA CB sing N N 103 DHL CA HA2 sing N N 104 DHL CA HA3 sing N N 105 DHL CB SG sing N N 106 DHL CB HB2 sing N N 107 DHL CB HB3 sing N N 108 DHL SG HS sing N N 109 GLN N CA sing N N 110 GLN N H sing N N 111 GLN N H2 sing N N 112 GLN CA C sing N N 113 GLN CA CB sing N N 114 GLN CA HA sing N N 115 GLN C O doub N N 116 GLN C OXT sing N N 117 GLN CB CG sing N N 118 GLN CB HB2 sing N N 119 GLN CB HB3 sing N N 120 GLN CG CD sing N N 121 GLN CG HG2 sing N N 122 GLN CG HG3 sing N N 123 GLN CD OE1 doub N N 124 GLN CD NE2 sing N N 125 GLN NE2 HE21 sing N N 126 GLN NE2 HE22 sing N N 127 GLN OXT HXT sing N N 128 GLU N CA sing N N 129 GLU N H sing N N 130 GLU N H2 sing N N 131 GLU CA C sing N N 132 GLU CA CB sing N N 133 GLU CA HA sing N N 134 GLU C O doub N N 135 GLU C OXT sing N N 136 GLU CB CG sing N N 137 GLU CB HB2 sing N N 138 GLU CB HB3 sing N N 139 GLU CG CD sing N N 140 GLU CG HG2 sing N N 141 GLU CG HG3 sing N N 142 GLU CD OE1 doub N N 143 GLU CD OE2 sing N N 144 GLU OE2 HE2 sing N N 145 GLU OXT HXT sing N N 146 GLY N CA sing N N 147 GLY N H sing N N 148 GLY N H2 sing N N 149 GLY CA C sing N N 150 GLY CA HA2 sing N N 151 GLY CA HA3 sing N N 152 GLY C O doub N N 153 GLY C OXT sing N N 154 GLY OXT HXT sing N N 155 HIS N CA sing N N 156 HIS N H sing N N 157 HIS N H2 sing N N 158 HIS CA C sing N N 159 HIS CA CB sing N N 160 HIS CA HA sing N N 161 HIS C O doub N N 162 HIS C OXT sing N N 163 HIS CB CG sing N N 164 HIS CB HB2 sing N N 165 HIS CB HB3 sing N N 166 HIS CG ND1 sing Y N 167 HIS CG CD2 doub Y N 168 HIS ND1 CE1 doub Y N 169 HIS ND1 HD1 sing N N 170 HIS CD2 NE2 sing Y N 171 HIS CD2 HD2 sing N N 172 HIS CE1 NE2 sing Y N 173 HIS CE1 HE1 sing N N 174 HIS NE2 HE2 sing N N 175 HIS OXT HXT sing N N 176 HOH O H1 sing N N 177 HOH O H2 sing N N 178 ILE N CA sing N N 179 ILE N H sing N N 180 ILE N H2 sing N N 181 ILE CA C sing N N 182 ILE CA CB sing N N 183 ILE CA HA sing N N 184 ILE C O doub N N 185 ILE C OXT sing N N 186 ILE CB CG1 sing N N 187 ILE CB CG2 sing N N 188 ILE CB HB sing N N 189 ILE CG1 CD1 sing N N 190 ILE CG1 HG12 sing N N 191 ILE CG1 HG13 sing N N 192 ILE CG2 HG21 sing N N 193 ILE CG2 HG22 sing N N 194 ILE CG2 HG23 sing N N 195 ILE CD1 HD11 sing N N 196 ILE CD1 HD12 sing N N 197 ILE CD1 HD13 sing N N 198 ILE OXT HXT sing N N 199 LEU N CA sing N N 200 LEU N H sing N N 201 LEU N H2 sing N N 202 LEU CA C sing N N 203 LEU CA CB sing N N 204 LEU CA HA sing N N 205 LEU C O doub N N 206 LEU C OXT sing N N 207 LEU CB CG sing N N 208 LEU CB HB2 sing N N 209 LEU CB HB3 sing N N 210 LEU CG CD1 sing N N 211 LEU CG CD2 sing N N 212 LEU CG HG sing N N 213 LEU CD1 HD11 sing N N 214 LEU CD1 HD12 sing N N 215 LEU CD1 HD13 sing N N 216 LEU CD2 HD21 sing N N 217 LEU CD2 HD22 sing N N 218 LEU CD2 HD23 sing N N 219 LEU OXT HXT sing N N 220 LYS N CA sing N N 221 LYS N H sing N N 222 LYS N H2 sing N N 223 LYS CA C sing N N 224 LYS CA CB sing N N 225 LYS CA HA sing N N 226 LYS C O doub N N 227 LYS C OXT sing N N 228 LYS CB CG sing N N 229 LYS CB HB2 sing N N 230 LYS CB HB3 sing N N 231 LYS CG CD sing N N 232 LYS CG HG2 sing N N 233 LYS CG HG3 sing N N 234 LYS CD CE sing N N 235 LYS CD HD2 sing N N 236 LYS CD HD3 sing N N 237 LYS CE NZ sing N N 238 LYS CE HE2 sing N N 239 LYS CE HE3 sing N N 240 LYS NZ HZ1 sing N N 241 LYS NZ HZ2 sing N N 242 LYS NZ HZ3 sing N N 243 LYS OXT HXT sing N N 244 MET N CA sing N N 245 MET N H sing N N 246 MET N H2 sing N N 247 MET CA C sing N N 248 MET CA CB sing N N 249 MET CA HA sing N N 250 MET C O doub N N 251 MET C OXT sing N N 252 MET CB CG sing N N 253 MET CB HB2 sing N N 254 MET CB HB3 sing N N 255 MET CG SD sing N N 256 MET CG HG2 sing N N 257 MET CG HG3 sing N N 258 MET SD CE sing N N 259 MET CE HE1 sing N N 260 MET CE HE2 sing N N 261 MET CE HE3 sing N N 262 MET OXT HXT sing N N 263 PHE N CA sing N N 264 PHE N H sing N N 265 PHE N H2 sing N N 266 PHE CA C sing N N 267 PHE CA CB sing N N 268 PHE CA HA sing N N 269 PHE C O doub N N 270 PHE C OXT sing N N 271 PHE CB CG sing N N 272 PHE CB HB2 sing N N 273 PHE CB HB3 sing N N 274 PHE CG CD1 doub Y N 275 PHE CG CD2 sing Y N 276 PHE CD1 CE1 sing Y N 277 PHE CD1 HD1 sing N N 278 PHE CD2 CE2 doub Y N 279 PHE CD2 HD2 sing N N 280 PHE CE1 CZ doub Y N 281 PHE CE1 HE1 sing N N 282 PHE CE2 CZ sing Y N 283 PHE CE2 HE2 sing N N 284 PHE CZ HZ sing N N 285 PHE OXT HXT sing N N 286 PRO N CA sing N N 287 PRO N CD sing N N 288 PRO N H sing N N 289 PRO CA C sing N N 290 PRO CA CB sing N N 291 PRO CA HA sing N N 292 PRO C O doub N N 293 PRO C OXT sing N N 294 PRO CB CG sing N N 295 PRO CB HB2 sing N N 296 PRO CB HB3 sing N N 297 PRO CG CD sing N N 298 PRO CG HG2 sing N N 299 PRO CG HG3 sing N N 300 PRO CD HD2 sing N N 301 PRO CD HD3 sing N N 302 PRO OXT HXT sing N N 303 SER N CA sing N N 304 SER N H sing N N 305 SER N H2 sing N N 306 SER CA C sing N N 307 SER CA CB sing N N 308 SER CA HA sing N N 309 SER C O doub N N 310 SER C OXT sing N N 311 SER CB OG sing N N 312 SER CB HB2 sing N N 313 SER CB HB3 sing N N 314 SER OG HG sing N N 315 SER OXT HXT sing N N 316 THR N CA sing N N 317 THR N H sing N N 318 THR N H2 sing N N 319 THR CA C sing N N 320 THR CA CB sing N N 321 THR CA HA sing N N 322 THR C O doub N N 323 THR C OXT sing N N 324 THR CB OG1 sing N N 325 THR CB CG2 sing N N 326 THR CB HB sing N N 327 THR OG1 HG1 sing N N 328 THR CG2 HG21 sing N N 329 THR CG2 HG22 sing N N 330 THR CG2 HG23 sing N N 331 THR OXT HXT sing N N 332 TRP N CA sing N N 333 TRP N H sing N N 334 TRP N H2 sing N N 335 TRP CA C sing N N 336 TRP CA CB sing N N 337 TRP CA HA sing N N 338 TRP C O doub N N 339 TRP C OXT sing N N 340 TRP CB CG sing N N 341 TRP CB HB2 sing N N 342 TRP CB HB3 sing N N 343 TRP CG CD1 doub Y N 344 TRP CG CD2 sing Y N 345 TRP CD1 NE1 sing Y N 346 TRP CD1 HD1 sing N N 347 TRP CD2 CE2 doub Y N 348 TRP CD2 CE3 sing Y N 349 TRP NE1 CE2 sing Y N 350 TRP NE1 HE1 sing N N 351 TRP CE2 CZ2 sing Y N 352 TRP CE3 CZ3 doub Y N 353 TRP CE3 HE3 sing N N 354 TRP CZ2 CH2 doub Y N 355 TRP CZ2 HZ2 sing N N 356 TRP CZ3 CH2 sing Y N 357 TRP CZ3 HZ3 sing N N 358 TRP CH2 HH2 sing N N 359 TRP OXT HXT sing N N 360 TYR N CA sing N N 361 TYR N H sing N N 362 TYR N H2 sing N N 363 TYR CA C sing N N 364 TYR CA CB sing N N 365 TYR CA HA sing N N 366 TYR C O doub N N 367 TYR C OXT sing N N 368 TYR CB CG sing N N 369 TYR CB HB2 sing N N 370 TYR CB HB3 sing N N 371 TYR CG CD1 doub Y N 372 TYR CG CD2 sing Y N 373 TYR CD1 CE1 sing Y N 374 TYR CD1 HD1 sing N N 375 TYR CD2 CE2 doub Y N 376 TYR CD2 HD2 sing N N 377 TYR CE1 CZ doub Y N 378 TYR CE1 HE1 sing N N 379 TYR CE2 CZ sing Y N 380 TYR CE2 HE2 sing N N 381 TYR CZ OH sing N N 382 TYR OH HH sing N N 383 TYR OXT HXT sing N N 384 VAL N CA sing N N 385 VAL N H sing N N 386 VAL N H2 sing N N 387 VAL CA C sing N N 388 VAL CA CB sing N N 389 VAL CA HA sing N N 390 VAL C O doub N N 391 VAL C OXT sing N N 392 VAL CB CG1 sing N N 393 VAL CB CG2 sing N N 394 VAL CB HB sing N N 395 VAL CG1 HG11 sing N N 396 VAL CG1 HG12 sing N N 397 VAL CG1 HG13 sing N N 398 VAL CG2 HG21 sing N N 399 VAL CG2 HG22 sing N N 400 VAL CG2 HG23 sing N N 401 VAL OXT HXT sing N N 402 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 2-AMINO-ETHANETHIOL DHL 3 BENZAMIDINE BEN 4 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 2WAU _pdbx_initial_refinement_model.details 'PDB ENTRY 2WAU' #